Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0007430

Physical Location & Seq

Genomic Coordinates Forward (+)

9316061 .. 9323303

Gene Structure 7243 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG114000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGGTGGCTAATGCATTGGCAGGTTCTCTTGTGAGGCCAAAAGTTGTTAAGAGTGTTCATTTCTGCCCTACAACCGGAGACATTACATCCAACATGGGTTTGCCTACAGGAACAGTTTATCCCACCAGGGGCAAACTCTTTGAGTATGGATTGTGCAAATACAAAGATCATCAGACTTTGTCAATGCAAGAAGTGCCTGAAAACTCTGCTCCTGGTCAGCTCCCAAGAACAGTGGATGTCATAGTTGAGGATGGCCTTGTAGATAAGTGCAAACCAGGAGACCGTGTGGCTGTTGTAGGGATTTACAAAGCTCTTCCTGGTAAAAGTAAGGGAAGTGTGAACGGAGTATTCAGGACGGTTCTCATAGCTAACAATGTTACTCAGCTCAACAAAGAGGCACAATCGCCACAGTACAGTGCTGAAGACCTGACGAATATAAAAAATATAGCAGAGAGAGATGAGGCATTTGATCTGCTTGGCAATTCACTTGCACCTTCTATTTATGGGCATTCATGGATAAGGAAGGCAGTGATACTATTAATGCTTGGTGGAGTAGAAAAGAAATTAAAGAATGGAACCCATTTACGAGGTGACATTAATATGATGATGGTTGGTGATCCTTCTGTTGCCAAGTCTCAACTTTTAAGAGCAATTATGAATATCGTTCCATTGGCAATATCAACTACTGGTCGGGGTTCTTCTGGGGTTGGTTTGACAGCTGCTGTTACTTCAGATCAAGAGACAGGAGAGAGAAGGCTAGAAGCTGGTGCCATGGTTCTTGCTGATCGCGGTGTTGTCTGTATTGATGAATTTGACAAAATGAATGATCAAGATCGCGTTGCCATACATGAAGTTATGGAACAGCAGACTGTTACTATTGCCAAAGCTGGAATCCATGCATCTCTCAACGCGCGGTGCAGTGTGGTGGCTGCTGCAAATCCCATATATGGCCCTTATGATCGTTCATTGACACCAACAAAGAATATCGGACTTCCAGACACTATGCTTTCTCGTTTTGATTTGCTGTTTATTGTATTGGATCAAATGGATCCTGATATTGACCGTCAAGTCTCAGAGCATGTATTGCACATGCATCGGTATCATTCTGCATCTGGAGGATATGGAAGAGAAGATGAAATTGTTAACGACTCCACCATATTTGTCAAGTATAACCGAATGCTTCATGGAAAGAAAACATCTAGGGGTCAGATACCCTCGCAATCAAGTACGTTTCTAAAGAAGTACATTCATTATGCAGAGCATAGGATTCAGCCTGATCTGACTGATGAGGCATCTGAACAAATTGCAACAGCATGTGCAGAACTCAGAGATGCCAGTTCAAATGCAAAGACTGGAGGAACACTTCCAATTACTGCCAGAACCTTAGAAACAATCATTCGTCTCTCAACTGCTCATGTGAAATTAAAGTTAAGCAGAAAGGTTACAAAATCTGATGTTGACGTTGCTCTTAAAGTCTTAAACTTCGCAATATATCACCAGGAGTTGACTGACATGGAGGAACGGGAGCAAGAAAGAGAAATGGAGAGCAATGTCAGATATGTTCATCGTTCAGAAATTTTATTTAAAAAATCTGGTTCAGACAAAGATAGAGATGGCTTTGTTATGGGTGAAGGTGCTGGAATATTGGTAATGGAGAGCTTGGAACATGCAATGAAACGAGGTGCACCTATTATTGCCGAGTACCTGGGAGGTGCTATTAACTGTGATGCGTATCATATGACTGATCCAAGAGTTGATGGACTTGGTGTATCTACATGCATAGAGAGAAGCCTTAAAGATGCTGGTGTGTCACCTGAAGAGGTTAACTACATCAATGCTCATGCAACTTCAACTCTATTGGGTGACCTGGCTGAGGTTAATGCTATAAAGAAAGTGTTCAAGAACACTAAAAAGATAAAAATCAATGCTACTAAGCTGCCGCTTGCTGAAAAACAAGCTGTGCGTGGCTCTTTCTTTGATTATTCTGCTCGGGGATTCTATGTGTATAGTTGTGAACCTCTCTCTTTGGGTTCCTTAACTTCCGATTTCGCCCTACTTCCTAGACGCATATCCAGCTTTAACCCATCTCATCCACCCCAGCAGACCAGCAACACCACCAGCAGCCTAGGACAATTTCTTTTACTCCGACCTAGACTTTGGAAACCAGACAGATCGCATGCTTCGTTTTTTCTGAAAGGTAAACGGCGACATATATATCTGAGTGAGGTTTCCCGGTCTTGTAGGTCGACGATGTGGCCTGGGCTGGGAGAGAGGGAGAGGGCGGCTGAAAATGTTCGTGTTTTTCAGTTTTATCGGGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000347 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016043 GO:0032392 GO:0032508 GO:0032991 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0051276 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03030 ko04110 ko04111 ko04113 map03030 map04110 map04111 map04113

Pfam Domains

Protein Families

MCM MCM_N MCM_OB

Protein Analysis

773

Amino Acids

85.25

Weight (kDa)

8.8

Isoelectric Point (pI)

33.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_OB	PF17207	9 - 105	4.8e-19	MCM OB domain
MCM	PF00493	143 - 365	1.3e-94	MCM P-loop domain
Mg_chelatase	PF01078	249 - 315	4.8e-07	Magnesium chelatase, subunit ChlI
MCM_lid	PF17855	411 - 494	4.6e-22	MCM AAA-lid domain
Ketoacyl-synt_C	PF02801	566 - 645	3.3e-20	Beta-ketoacyl synthase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007430)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46280 AT5G46280 AT5G46280 AT5G46280
fragaria_vesca	FvH4_3g05860
malus_domestica	MD05G1286600.v1.1 MD10G1264100.v1.1
prunus_persica	Prupe.4G078300_v2.0.a1
pyrus_communis	pycom10g22020
rosa_chinensis	RchiOBHm_Chr5g0013601 RchiOBHm_Chr5g0013661
rosa_laevigata	RLG00000032038
rosa_multiflora	Rmu_sc0002573.1_g000006 Rmu_sc0002573.1_g000015
rosa_roxburghii	Rroxscaffold_1G00062940
rosa_rugosa	Rorug05G0011700 Rorug05G0011800
rosa_samantha	Rh5AG106100 Rh5AG106300 Rh5BG102500 Rh5CG114000 Rh5CG114400 Rh5DG100800 Rh5DG101200
rosa_wichuraiana	Rw5G009270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1067
Acc36I	ACCTGC	1 cut(s)	11
AccB1I	GGYRCC	1 cut(s)	767
AccI	GTMKAC	1 cut(s)	2246
AccII	CGCG	4 cut(s)	789, 837, 911, 913
AciI	CCGC	4 cut(s)	789, 913, 1940, 2282
AclWI	GGATC	5 cut(s)	611, 1043, 1047, 1056, 1739
AcsI	RAATTY	2 cut(s)	809, 1575
AcuI	CTGAAG	3 cut(s)	441, 714, 1836
AfaI	GTAC	4 cut(s)	413, 1228, 1244, 1703
AfiI	CCNNNNNNNGG	5 cut(s)	74, 128, 947, 1873, 2264
AgsI	TTSAA	3 cut(s)	1341, 1851, 1900
AjnI	CCWGG	8 cut(s)	125, 211, 274, 316, 1497, 1704, 1866, 2257
AloI	GAACNNNNNNTCC	2 cut(s)	103, 135
Alw21I	GWGCWC	1 cut(s)	1687
Alw26I	GTCTC	6 cut(s)	72, 273, 639, 734, 1075, 1406
Alw44I	GTGCAC	1 cut(s)	1683
AlwI	GGATC	5 cut(s)	611, 1043, 1047, 1056, 1739
AlwNI	CAGNNNCTG	1 cut(s)	722
Ama87I	CYCGRG	1 cut(s)	1989
AoxI	GGCC	4 cut(s)	35, 253, 949, 2255
ApaLI	GTGCAC	1 cut(s)	1683
ApeKI	GCWGC	5 cut(s)	719, 929, 932, 1936, 2121
ApoI	RAATTY	2 cut(s)	809, 1575
ArsI	GACNNNNNNTTYG	2 cut(s)	2139, 2171
AseI	ATTAAT	2 cut(s)	539, 597
Asp700I	GAANNNNTTC	2 cut(s)	1895, 2292
AspA2I	CCTAGG	1 cut(s)	2125
AspLEI	GCGC	1 cut(s)	913
AspS9I	GGNCC	1 cut(s)	950
AsuC2I	CCSGG	1 cut(s)	2233
AsuHPI	GGTGA	6 cut(s)	602, 626, 1487, 1640, 1803, 1874
AvaI	CYCGRG	1 cut(s)	1989
AvrII	CCTAGG	1 cut(s)	2125
BaeGI	GKGCMC	1 cut(s)	1687
BamHI	GGATCC	1 cut(s)	1048
BanI	GGYRCC	1 cut(s)	767
BbsI	GAAGAC	1 cut(s)	429
Bbv12I	GWGCWC	1 cut(s)	1687
BbvCI	CCTCAGC	1 cut(s)	1872
BbvI	GCAGC	5 cut(s)	706, 916, 919, 1923, 2133
BccI	CCATC	5 cut(s)	245, 601, 1607, 1751, 2092
BceAI	ACGGC	1 cut(s)	2219
BcgI	CGANNNNNNTGC	2 cut(s)	1076, 1110
BciT130I	CCWGG	8 cut(s)	127, 213, 276, 318, 1499, 1706, 1868, 2259
BclI	TGATCA	1 cut(s)	826
BcnI	CCSGG	1 cut(s)	2233
BcoDI	GTCTC	6 cut(s)	72, 273, 639, 734, 1075, 1406
BfaI	CTAG	5 cut(s)	758, 1200, 2061, 2126, 2151
BfmI	CTRYAG	1 cut(s)	105
BfuAI	ACCTGC	1 cut(s)	11
BisI	GCNGC	7 cut(s)	720, 930, 933, 1937, 1940, 2122, 2283
BlnI	CCTAGG	1 cut(s)	2125
BlsI	GCNGC	7 cut(s)	721, 931, 934, 1938, 1941, 2123, 2284
Bme1390I	CCNGG	9 cut(s)	127, 213, 276, 318, 1499, 1706, 1868, 2233, 2259
BmeT110I	CYCGRG	1 cut(s)	1989
BmgT120I	GGNCC	1 cut(s)	950
BmiI	GGNNCC	4 cut(s)	577, 769, 1050, 2032
BmrFI	CCNGG	9 cut(s)	127, 213, 276, 318, 1499, 1706, 1868, 2233, 2259
BmsI	GCATC	7 cut(s)	908, 1102, 1118, 1301, 1321, 1717, 1789
BpiI	GAAGAC	1 cut(s)	429
BpmI	CTGGAG	2 cut(s)	1134, 1374
Bpu10I	CCTNAGC	1 cut(s)	1872
BpuMI	CCSGG	1 cut(s)	2233
BsaBI	GATNNNNATC	3 cut(s)	831, 1731, 1919
BsaI	GGTCTC	1 cut(s)	273
BsaJI	CCNNGG	5 cut(s)	126, 771, 1705, 2125, 2258
BsaWI	WCCGGW	1 cut(s)	74
BsaXI	ACNNNNNCTCC	2 cut(s)	270, 300
Bsc4I	CCNNNNNNNGG	5 cut(s)	74, 128, 947, 1873, 2264
Bse1I	ACTGG	3 cut(s)	691, 1335, 1357
Bse3DI	GCAATG	2 cut(s)	1555, 1677
Bse8I	GATNNNNATC	3 cut(s)	831, 1731, 1919
BseBI	CCWGG	8 cut(s)	127, 213, 276, 318, 1499, 1706, 1868, 2259
BseDI	CCNNGG	5 cut(s)	126, 771, 1705, 2125, 2258
BseGI	GGATG	4 cut(s)	86, 241, 256, 2089
BseJI	GATNNNNATC	3 cut(s)	831, 1731, 1919
BseLI	CCNNNNNNNGG	5 cut(s)	74, 128, 947, 1873, 2264
BseMI	GCAATG	2 cut(s)	1555, 1677
BseMII	CTCAG	5 cut(s)	395, 1086, 1339, 1863, 2210
BseNI	ACTGG	3 cut(s)	691, 1335, 1357
BseSI	GKGCMC	1 cut(s)	1687
BseXI	GCAGC	5 cut(s)	706, 916, 919, 1923, 2133
BseYI	CCCAGC	2 cut(s)	2097, 2263
BsgI	GTGCAG	2 cut(s)	937, 1338
Bsh1236I	CGCG	4 cut(s)	789, 837, 911, 913
BshFI	GGCC	4 cut(s)	37, 255, 951, 2257
BshNI	GGYRCC	1 cut(s)	767
BsiHKAI	GWGCWC	1 cut(s)	1687
BsiHKCI	CYCGRG	1 cut(s)	1989
BsiSI	CCGG	2 cut(s)	75, 2233
BslI	CCNNNNNNNGG	5 cut(s)	74, 128, 947, 1873, 2264
BsmAI	GTCTC	6 cut(s)	72, 273, 639, 734, 1075, 1406
BsmBI	CGTCTC	1 cut(s)	1406
BsmI	GAATGC	2 cut(s)	508, 1182
BsnI	GGCC	4 cut(s)	37, 255, 951, 2257
Bso31I	GGTCTC	1 cut(s)	273
BsoBI	CYCGRG	1 cut(s)	1989
Bsp1286I	GDGCHC	1 cut(s)	1687
Bsp19I	CCATGG	1 cut(s)	771
BspACI	CCGC	4 cut(s)	789, 913, 1940, 2282
BspANI	GGCC	4 cut(s)	37, 255, 951, 2257
BspCNI	CTCAG	5 cut(s)	394, 1085, 1338, 1864, 2211
BspFNI	CGCG	4 cut(s)	789, 837, 911, 913
BspLI	GGNNCC	4 cut(s)	577, 769, 1050, 2032
BspMI	ACCTGC	1 cut(s)	11
BspPI	GGATC	5 cut(s)	611, 1043, 1047, 1056, 1739
BspQI	GCTCTTC	1 cut(s)	318
BspT107I	GGYRCC	1 cut(s)	767
BspTNI	GGTCTC	1 cut(s)	273
BsrDI	GCAATG	2 cut(s)	1555, 1677
BsrI	ACTGG	3 cut(s)	691, 1335, 1357
BssECI	CCNNGG	5 cut(s)	126, 771, 1705, 2125, 2258
BssT1I	CCWWGG	2 cut(s)	771, 2125
Bst2UI	CCWGG	8 cut(s)	127, 213, 276, 318, 1499, 1706, 1868, 2259
Bst4CI	ACNGT	9 cut(s)	115, 232, 284, 358, 411, 416, 871, 1064, 1724
Bst6I	CTCTTC	3 cut(s)	318, 1120, 1812
BstAPI	GCANNNNNTGC	2 cut(s)	193, 1084
BstC8I	GCNNGC	2 cut(s)	1944, 2178
BstDEI	CTNAG	7 cut(s)	381, 1072, 1325, 1384, 1872, 1932, 2219
BstDSI	CCRYGG	1 cut(s)	771
BstEII	GGTNACC	1 cut(s)	1862
BstENI	CCTNNNNNAGG	1 cut(s)	1871
BstF5I	GGATG	4 cut(s)	86, 241, 256, 2089
BstFNI	CGCG	4 cut(s)	789, 837, 911, 913
BstHHI	GCGC	1 cut(s)	913
BstMAI	GTCTC	6 cut(s)	72, 273, 639, 734, 1075, 1406
BstMWI	GCNNNNNNNGC	3 cut(s)	193, 1084, 2073
BstNI	CCWGG	8 cut(s)	127, 213, 276, 318, 1499, 1706, 1868, 2259
BstNSI	RCATGY	6 cut(s)	1082, 1093, 1317, 1670, 1779, 2180
BstPI	GGTNACC	1 cut(s)	1862
BstSCI	CCNGG	9 cut(s)	125, 211, 274, 316, 1497, 1704, 1866, 2231, 2257
BstSFI	CTRYAG	1 cut(s)	105
BstSLI	GKGCMC	1 cut(s)	1687
BstUI	CGCG	4 cut(s)	789, 837, 911, 913
BstV1I	GCAGC	5 cut(s)	706, 916, 919, 1923, 2133
BstV2I	GAAGAC	1 cut(s)	429
BstX2I	RGATCY	1 cut(s)	1048
BstYI	RGATCY	1 cut(s)	1048
BsuRI	GGCC	4 cut(s)	37, 255, 951, 2257
BtgI	CCRYGG	1 cut(s)	771
BtsCI	GGATG	4 cut(s)	86, 241, 256, 2089
BtsI	GCAGTG	2 cut(s)	534, 925
BtsIMutI	CAGTG	4 cut(s)	237, 421, 534, 925
BveI	ACCTGC	1 cut(s)	11
Cac8I	GCNNGC	2 cut(s)	1944, 2178
CaiI	CAGNNNCTG	1 cut(s)	722
CfoI	GCGC	1 cut(s)	913
Cfr13I	GGNCC	1 cut(s)	950
CseI	GACGC	1 cut(s)	2073
Csp6I	GTAC	4 cut(s)	412, 1227, 1243, 1702
CspCI	CAANNNNNGTGG	4 cut(s)	213, 248, 1141, 1176
CviQI	GTAC	4 cut(s)	412, 1227, 1243, 1702
DdeI	CTNAG	7 cut(s)	381, 1072, 1325, 1384, 1872, 1932, 2219
DraI	TTTAAA	1 cut(s)	1585
DrdI	GACNNNNNNGTC	1 cut(s)	1067
DseDI	GACNNNNNNGTC	1 cut(s)	1067
Eam1104I	CTCTTC	3 cut(s)	318, 1120, 1812
EarI	CTCTTC	3 cut(s)	318, 1120, 1812
Eco130I	CCWWGG	2 cut(s)	771, 2125
Eco31I	GGTCTC	1 cut(s)	273
Eco57I	CTGAAG	3 cut(s)	441, 714, 1836
Eco88I	CYCGRG	1 cut(s)	1989
Eco91I	GGTNACC	1 cut(s)	1862
EcoNI	CCTNNNNNAGG	1 cut(s)	1871
EcoO65I	GGTNACC	1 cut(s)	1862
EcoRII	CCWGG	8 cut(s)	125, 211, 274, 316, 1497, 1704, 1866, 2257
EcoT14I	CCWWGG	2 cut(s)	771, 2125
EcoT22I	ATGCAT	4 cut(s)	16, 901, 1095, 1781
ErhI	CCWWGG	2 cut(s)	771, 2125
Esp3I	CGTCTC	1 cut(s)	1406
FauNDI	CATATG	1 cut(s)	1737
FbaI	TGATCA	1 cut(s)	826
FblI	GTMKAC	1 cut(s)	2246
Fnu4HI	GCNGC	7 cut(s)	720, 930, 933, 1937, 1940, 2122, 2283
FokI	GGATG	4 cut(s)	73, 248, 263, 2076
Fsp4HI	GCNGC	7 cut(s)	720, 930, 933, 1937, 1940, 2122, 2283
FspBI	CTAG	5 cut(s)	758, 1200, 2061, 2126, 2151
GlaI	GCGC	1 cut(s)	912
GluI	GCNGC	7 cut(s)	720, 930, 933, 1937, 1940, 2122, 2283
GsaI	CCCAGC	2 cut(s)	2101, 2267
GsuI	CTGGAG	2 cut(s)	1134, 1374
HaeIII	GGCC	4 cut(s)	37, 255, 951, 2257
HapII	CCGG	2 cut(s)	75, 2233
HgaI	GACGC	1 cut(s)	2073
HhaI	GCGC	1 cut(s)	913
Hin6I	GCGC	1 cut(s)	911
HinP1I	GCGC	1 cut(s)	911
HincII	GTYRAC	5 cut(s)	1144, 1459, 1506, 1825, 2247
HindII	GTYRAC	5 cut(s)	1144, 1459, 1506, 1825, 2247
HinfI	GANTC	4 cut(s)	891, 1148, 1267, 1995
HpaI	GTTAAC	2 cut(s)	1144, 1825
HpaII	CCGG	2 cut(s)	75, 2233
HphI	GGTGA	6 cut(s)	602, 626, 1487, 1640, 1803, 1874
Hpy166II	GTNNAC	9 cut(s)	340, 1144, 1459, 1506, 1685, 1825, 2015, 2201, 2247
Hpy188III	TCNNGA	7 cut(s)	352, 737, 830, 995, 1052, 1113, 1900
Hpy8I	GTNNAC	9 cut(s)	340, 1144, 1459, 1506, 1685, 1825, 2015, 2201, 2247
Hpy99I	CGWCG	1 cut(s)	2251
HpyAV	CCTTC	5 cut(s)	504, 517, 630, 747, 1625
HpyCH4III	ACNGT	9 cut(s)	115, 232, 284, 358, 411, 416, 871, 1064, 1724
HpyCH4IV	ACGT	2 cut(s)	1229, 1461
HpyF10VI	GCNNNNNNNGC	3 cut(s)	193, 1084, 2073
HpyF3I	CTNAG	7 cut(s)	381, 1072, 1325, 1384, 1872, 1932, 2219
HpySE526I	ACGT	2 cut(s)	1229, 1461
HspAI	GCGC	1 cut(s)	911
Ksp22I	TGATCA	1 cut(s)	826
KspAI	GTTAAC	2 cut(s)	1144, 1825
LguI	GCTCTTC	1 cut(s)	318
LmnI	GCTCC	3 cut(s)	214, 225, 1525
Lsp1109I	GCAGC	5 cut(s)	706, 916, 919, 1923, 2133
LweI	GCATC	7 cut(s)	908, 1102, 1118, 1301, 1321, 1717, 1789
MaeI	CTAG	5 cut(s)	758, 1200, 2061, 2126, 2151
MaeII	ACGT	2 cut(s)	1229, 1461
MaeIII	GTNAC	7 cut(s)	376, 590, 724, 871, 1441, 1809, 1862
MboII	GAAGA	6 cut(s)	305, 434, 690, 1137, 1142, 1829
MflI	RGATCY	1 cut(s)	1048
MhlI	GDGCHC	1 cut(s)	1687
MlyI	GAGTC	1 cut(s)	1142
MmeI	TCCRAC	2 cut(s)	114, 2170
Mph1103I	ATGCAT	4 cut(s)	16, 901, 1095, 1781
MroXI	GAANNNNTTC	2 cut(s)	1895, 2292
MslI	CAYNNNNRTG	1 cut(s)	599
MspA1I	CMGCKG	1 cut(s)	719
MspI	CCGG	2 cut(s)	75, 2233
MspR9I	CCNGG	9 cut(s)	127, 213, 276, 318, 1499, 1706, 1868, 2233, 2259
Mva1269I	GAATGC	2 cut(s)	508, 1182
MvaI	CCWGG	8 cut(s)	127, 213, 276, 318, 1499, 1706, 1868, 2259
MvnI	CGCG	4 cut(s)	789, 837, 911, 913
MwoI	GCNNNNNNNGC	3 cut(s)	193, 1084, 2073
NciI	CCSGG	1 cut(s)	2233
NcoI	CCATGG	1 cut(s)	771
NdeI	CATATG	1 cut(s)	1737
NlaIV	GGNNCC	4 cut(s)	577, 769, 1050, 2032
NmeAIII	GCCGAG	1 cut(s)	1723
NmuCI	GTSAC	3 cut(s)	590, 1809, 1862
NsiI	ATGCAT	4 cut(s)	16, 901, 1095, 1781
NspI	RCATGY	6 cut(s)	1082, 1093, 1317, 1670, 1779, 2180
PaeI	GCATGC	1 cut(s)	2180
PciSI	GCTCTTC	1 cut(s)	318
PcsI	WCGNNNNNNNCGW	1 cut(s)	2180
PctI	GAATGC	2 cut(s)	508, 1182
PdmI	GAANNNNTTC	2 cut(s)	1895, 2292
PfeI	GAWTC	3 cut(s)	891, 1267, 1995
PflFI	GACNNNGTC	1 cut(s)	178
PkrI	GCNGC	7 cut(s)	721, 931, 934, 1938, 1941, 2123, 2284
PleI	GAGTC	1 cut(s)	1142
PpsI	GAGTC	1 cut(s)	1142
PshBI	ATTAAT	2 cut(s)	539, 597
Psp6I	CCWGG	8 cut(s)	125, 211, 274, 316, 1497, 1704, 1866, 2257
PspEI	GGTNACC	1 cut(s)	1862
PspFI	CCCAGC	2 cut(s)	2097, 2263
PspGI	CCWGG	8 cut(s)	125, 211, 274, 316, 1497, 1704, 1866, 2257
PspN4I	GGNNCC	4 cut(s)	577, 769, 1050, 2032
PspPI	GGNCC	1 cut(s)	950
PstNI	CAGNNNCTG	1 cut(s)	722
PsuI	RGATCY	1 cut(s)	1048
PsyI	GACNNNGTC	1 cut(s)	178
PvuII	CAGCTG	1 cut(s)	719
RsaI	GTAC	4 cut(s)	413, 1228, 1244, 1703
RsaNI	GTAC	4 cut(s)	412, 1227, 1243, 1702
RseI	CAYNNNNRTG	1 cut(s)	599
SalI	GTCGAC	1 cut(s)	2245
SapI	GCTCTTC	1 cut(s)	318
SatI	GCNGC	7 cut(s)	720, 930, 933, 1937, 1940, 2122, 2283
Sau96I	GGNCC	1 cut(s)	950
SchI	GAGTC	1 cut(s)	1142
ScrFI	CCNGG	9 cut(s)	127, 213, 276, 318, 1499, 1706, 1868, 2233, 2259
SduI	GDGCHC	1 cut(s)	1687
SfaNI	GCATC	7 cut(s)	908, 1102, 1118, 1301, 1321, 1717, 1789
SfcI	CTRYAG	1 cut(s)	105
SmiMI	CAYNNNNRTG	1 cut(s)	599
SphI	GCATGC	1 cut(s)	2180
SsiI	CCGC	4 cut(s)	789, 913, 1940, 2282
SspI	AATATT	1 cut(s)	1644
SspMI	CTAG	5 cut(s)	758, 1200, 2061, 2126, 2151
StyD4I	CCNGG	9 cut(s)	125, 211, 274, 316, 1497, 1704, 1866, 2231, 2257
StyI	CCWWGG	2 cut(s)	771, 2125
TaaI	ACNGT	9 cut(s)	115, 232, 284, 358, 411, 416, 871, 1064, 1724
TaiI	ACGT	2 cut(s)	1232, 1464
TaqI	TCGA	1 cut(s)	2246
TatI	WGTACW	2 cut(s)	411, 1242
TauI	GCSGC	2 cut(s)	1942, 2285
TfiI	GAWTC	3 cut(s)	891, 1267, 1995
TscAI	CASTG	4 cut(s)	237, 421, 534, 925
TseFI	GTSAC	3 cut(s)	590, 1809, 1862
TseI	GCWGC	5 cut(s)	719, 929, 932, 1936, 2121
Tsp45I	GTSAC	3 cut(s)	590, 1809, 1862
TspGWI	ACGGA	1 cut(s)	357
TspRI	CASTG	4 cut(s)	237, 421, 534, 925
Tth111I	GACNNNGTC	1 cut(s)	178
VneI	GTGCAC	1 cut(s)	1683
VspI	ATTAAT	2 cut(s)	539, 597
XagI	CCTNNNNNAGG	1 cut(s)	1871
XapI	RAATTY	2 cut(s)	809, 1575
XceI	RCATGY	6 cut(s)	1082, 1093, 1317, 1670, 1779, 2180
XmaJI	CCTAGG	1 cut(s)	2125
XmiI	GTMKAC	1 cut(s)	2246
XmnI	GAANNNNTTC	2 cut(s)	1895, 2292
XspI	CTAG	5 cut(s)	758, 1200, 2061, 2126, 2151
Zsp2I	ATGCAT	4 cut(s)	16, 901, 1095, 1781

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.