Rmu_sc0002573.1_g000015

Belongs to the MCM family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002573.1
Physical Location & Seq
Reverse (-)
67480 .. 71677
4198 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002573.1_g000015.1.cds

Sequence Viewer

Length: 1512 bp
atgtacaactctgcggagtccccaaataagaggagcataagtgacatccgggatacgtcctgcccctacaagttcctgaactctgttctcccccattctcttcccaaatctcaatcaccttcgccgccgccgccgctccgcaaacaccacgatcgaaagaaaatggacatcagcgaagaagccagggccgctcaccgccgagagatctgctgtctgagttctcttgtgaggccaaaagttgttaagagtgttcatttctgccctacaaccggagacattacatccaacatggggcaaactcttgagtatggattgtgcaaatacaaagatcatcagactttgtcaatgcaagaagtgcctgaaaactctgctcctggtcagctcccaagaacagtggatgtcatagttgaggatggccttgtagataagtgcaaaccaggagaccgtgtggctgttgtagggatttacaaagctcttcctggtaaaagtaagggaagtgtgaacggagtattcaggacggttctcatagctaacaatgttactcagctcaacaaagaggcacaatcgccacagtacagtgctgaagacctgacgaatataaaaaatatagcagagagagatgatgcatttgatctgcttggcaagtcacttgcaccttctatttatgggcattcatggataaagaaggcagtgatactattaatgcttggtggagtagaaaagaaattaaagaatggaacccatttacgaggtgacattaatatgatgatggttggtgatccttctgttgccaagtctcaacttttaagagcaattatgaatatcgttccattggcaatatcaactactggtcggggttcttctggggttggtttgacagctgctgttacttcagatcaagagacaggagagagaaggctagaagctggtgccatggttcttgctgatcgcggtgttttctgtattgatgaatttgacaaaatgaatgatcaagatcgcgttgccatacataaagttatggaacagcagactgttactattgccaaagctggaatccatgcatctctcaacacgtggtgcagtgtggtggctgctgcaaatcccatatatggcccttatgatcgttcattgacaccaacaaagaatatcggacttccagacactttgctttctcgttttgatttgctgtttattgtattggatcaaatggatcctgatattgaccgtcaagtctcagagcatgtattgcgcatgcattggtatcattctgcatctggaggatatggaggagaagatgaaattgataacgactccaccatatttgtcaagtataaccgaatgcttcatggaaagaaaacatctagggtcttaaacttcgcaatatatcacaaggagttgactgacatggaggaatgggagcaagaaagagaaatggagaggaatgtcagagatgttcatcgttcaggtgaaaatgatggatctagcaatagagctgctactagagatgcgtaa

Protein Analysis

503

Amino Acids

55.74

Weight (kDa)

6.97

Isoelectric Point (pI)

40.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1229
Acc16I TGCGCA 1 cut(s) 1250
AccB1I GGYRCC 1 cut(s) 929
AccBSI CCGCTC 2 cut(s) 136, 191
AccII CGCG 2 cut(s) 951, 999
AciI CCGC 9 cut(s) 14, 125, 128, 131, 134, 139, 189, 196, 951
AclWI GGATC 5 cut(s) 773, 1205, 1209, 1218, 1486
AcsI RAATTY 1 cut(s) 971
AcuI CTGAAG 2 cut(s) 603, 876
AcvI CACGTG 1 cut(s) 1074
AdeI CACNNNGTG 1 cut(s) 1077
AfaI GTAC 2 cut(s) 5, 575
AfiI CCNNNNNNNGG 3 cut(s) 269, 291, 1109
AflIII ACRYGT 1 cut(s) 1071
AjnI CCWGG 4 cut(s) 182, 373, 436, 478
AluBI AGCT 8 cut(s) 382, 473, 530, 547, 881, 926, 1049, 1493
AluI AGCT 8 cut(s) 382, 473, 530, 547, 881, 926, 1049, 1493
Alw26I GTCTC 5 cut(s) 267, 435, 801, 896, 1237
AlwI GGATC 5 cut(s) 773, 1205, 1209, 1218, 1486
AlwNI CAGNNNCTG 1 cut(s) 884
AoxI GGCC 4 cut(s) 186, 230, 415, 1111
ApeKI GCWGC 4 cut(s) 881, 1091, 1094, 1493
ApoI RAATTY 1 cut(s) 971
AseI ATTAAT 2 cut(s) 701, 759
AspLEI GCGC 1 cut(s) 1251
AspS9I GGNCC 2 cut(s) 186, 1112
AsuC2I CCSGG 1 cut(s) 50
AsuHPI GGTGA 5 cut(s) 108, 185, 764, 788, 1478
BamHI GGATCC 1 cut(s) 1210
BanI GGYRCC 1 cut(s) 929
BbrPI CACGTG 1 cut(s) 1074
BbsI GAAGAC 1 cut(s) 591
BbvI GCAGC 4 cut(s) 868, 1078, 1081, 1480
BccI CCATC 3 cut(s) 407, 763, 1469
BcgI CGANNNNNNTGC 2 cut(s) 189, 223
BciT130I CCWGG 4 cut(s) 184, 375, 438, 480
BciVI GTATCC 1 cut(s) 46
BclI TGATCA 1 cut(s) 988
BcnI CCSGG 1 cut(s) 50
BcoDI GTCTC 5 cut(s) 267, 435, 801, 896, 1237
BfaI CTAG 4 cut(s) 920, 1362, 1482, 1500
BfuI GTATCC 1 cut(s) 46
BglII AGATCT 1 cut(s) 204
BisI GCNGC 9 cut(s) 125, 128, 131, 134, 189, 882, 1092, 1095, 1494
BlsI GCNGC 9 cut(s) 126, 129, 132, 135, 190, 883, 1093, 1096, 1495
Bme1390I CCNGG 5 cut(s) 50, 184, 375, 438, 480
BmgT120I GGNCC 2 cut(s) 186, 1112
BmiI GGNNCC 3 cut(s) 739, 931, 1212
BmrFI CCNGG 5 cut(s) 50, 184, 375, 438, 480
BmsI GCATC 4 cut(s) 613, 1070, 1280, 1495
BpiI GAAGAC 1 cut(s) 591
BpmI CTGGAG 1 cut(s) 1296
BpuEI CTTGAG 1 cut(s) 323
BpuMI CCSGG 1 cut(s) 50
BsaAI YACGTR 1 cut(s) 1074
BsaBI GATNNNNATC 2 cut(s) 993, 1455
BsaI GGTCTC 1 cut(s) 435
BsaJI CCNNGG 2 cut(s) 183, 933
BsaWI WCCGGW 1 cut(s) 269
BsaXI ACNNNNNCTCC 4 cut(s) 25, 55, 432, 462
Bsc4I CCNNNNNNNGG 3 cut(s) 269, 291, 1109
Bse1I ACTGG 1 cut(s) 853
Bse8I GATNNNNATC 2 cut(s) 993, 1455
BseBI CCWGG 4 cut(s) 184, 375, 438, 480
BseDI CCNNGG 2 cut(s) 183, 933
BseGI GGATG 4 cut(s) 45, 281, 403, 418
BseJI GATNNNNATC 2 cut(s) 993, 1455
BseLI CCNNNNNNNGG 3 cut(s) 269, 291, 1109
BseMII CTCAG 3 cut(s) 206, 557, 1248
BseNI ACTGG 1 cut(s) 853
BseRI GAGGAG 2 cut(s) 46, 1302
BseXI GCAGC 4 cut(s) 868, 1078, 1081, 1480
BsgI GTGCAG 1 cut(s) 1099
Bsh1236I CGCG 2 cut(s) 951, 999
Bsh1285I CGRYCG 1 cut(s) 154
BshFI GGCC 4 cut(s) 188, 232, 417, 1113
BshNI GGYRCC 1 cut(s) 929
BsiEI CGRYCG 1 cut(s) 154
BsiSI CCGG 2 cut(s) 49, 270
BslFI GGGAC 1 cut(s) 4
BslI CCNNNNNNNGG 3 cut(s) 269, 291, 1109
BsmAI GTCTC 5 cut(s) 267, 435, 801, 896, 1237
BsmFI GGGAC 1 cut(s) 4
BsmI GAATGC 2 cut(s) 670, 1344
BsnI GGCC 4 cut(s) 188, 232, 417, 1113
Bso31I GGTCTC 1 cut(s) 435
Bsp1407I TGTACA 1 cut(s) 3
Bsp19I CCATGG 1 cut(s) 933
BspACI CCGC 9 cut(s) 14, 125, 128, 131, 134, 139, 189, 196, 951
BspANI GGCC 4 cut(s) 188, 232, 417, 1113
BspCNI CTCAG 3 cut(s) 207, 556, 1247
BspFNI CGCG 2 cut(s) 951, 999
BspLI GGNNCC 3 cut(s) 739, 931, 1212
BspPI GGATC 5 cut(s) 773, 1205, 1209, 1218, 1486
BspQI GCTCTTC 1 cut(s) 480
BspT107I GGYRCC 1 cut(s) 929
BspTNI GGTCTC 1 cut(s) 435
BsrBI CCGCTC 2 cut(s) 136, 191
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 1 cut(s) 853
BssECI CCNNGG 2 cut(s) 183, 933
BssT1I CCWWGG 1 cut(s) 933
Bst2UI CCWGG 4 cut(s) 184, 375, 438, 480
Bst4CI ACNGT 7 cut(s) 394, 446, 520, 573, 578, 1033, 1226
Bst6I CTCTTC 2 cut(s) 105, 480
BstAPI GCANNNNNTGC 2 cut(s) 355, 1246
BstAUI TGTACA 1 cut(s) 3
BstBAI YACGTR 1 cut(s) 1074
BstC8I GCNNGC 1 cut(s) 1253
BstDEI CTNAG 3 cut(s) 215, 543, 1234
BstDSI CCRYGG 1 cut(s) 933
BstF5I GGATG 4 cut(s) 45, 281, 403, 418
BstFNI CGCG 2 cut(s) 951, 999
BstHHI GCGC 1 cut(s) 1251
BstMAI GTCTC 5 cut(s) 267, 435, 801, 896, 1237
BstMCI CGRYCG 1 cut(s) 154
BstMWI GCNNNNNNNGC 5 cut(s) 130, 133, 188, 355, 1246
BstNI CCWGG 4 cut(s) 184, 375, 438, 480
BstNSI RCATGY 2 cut(s) 1244, 1255
BstSCI CCNGG 5 cut(s) 48, 182, 373, 436, 478
BstUI CGCG 2 cut(s) 951, 999
BstV1I GCAGC 4 cut(s) 868, 1078, 1081, 1480
BstV2I GAAGAC 1 cut(s) 591
BstX2I RGATCY 3 cut(s) 204, 1210, 1478
BstYI RGATCY 3 cut(s) 204, 1210, 1478
BsuI GTATCC 1 cut(s) 46
BsuRI GGCC 4 cut(s) 188, 232, 417, 1113
BtgI CCRYGG 1 cut(s) 933
BtsCI GGATG 4 cut(s) 45, 281, 403, 418
BtsI GCAGTG 2 cut(s) 696, 1087
BtsIMutI CAGTG 4 cut(s) 399, 583, 696, 1087
Cac8I GCNNGC 1 cut(s) 1253
CaiI CAGNNNCTG 1 cut(s) 884
CfoI GCGC 1 cut(s) 1251
Cfr13I GGNCC 2 cut(s) 186, 1112
Csp6I GTAC 2 cut(s) 4, 574
CspCI CAANNNNNGTGG 4 cut(s) 375, 410, 1303, 1338
CviAII CATG 8 cut(s) 289, 675, 934, 1058, 1241, 1252, 1346, 1405
CviQI GTAC 2 cut(s) 4, 574
DdeI CTNAG 3 cut(s) 215, 543, 1234
DraIII CACNNNGTG 1 cut(s) 1077
DrdI GACNNNNNNGTC 1 cut(s) 1229
DseDI GACNNNNNNGTC 1 cut(s) 1229
Eam1104I CTCTTC 2 cut(s) 105, 480
EarI CTCTTC 2 cut(s) 105, 480
Eco130I CCWWGG 1 cut(s) 933
Eco31I GGTCTC 1 cut(s) 435
Eco57I CTGAAG 2 cut(s) 603, 876
Eco72I CACGTG 1 cut(s) 1074
EcoRII CCWGG 4 cut(s) 182, 373, 436, 478
EcoT14I CCWWGG 1 cut(s) 933
EcoT22I ATGCAT 3 cut(s) 628, 1063, 1257
ErhI CCWWGG 1 cut(s) 933
FaeI CATG 8 cut(s) 292, 678, 937, 1061, 1244, 1255, 1349, 1408
FaqI GGGAC 1 cut(s) 4
FatI CATG 8 cut(s) 288, 674, 933, 1057, 1240, 1251, 1345, 1404
FbaI TGATCA 1 cut(s) 988
Fnu4HI GCNGC 9 cut(s) 125, 128, 131, 134, 189, 882, 1092, 1095, 1494
FokI GGATG 4 cut(s) 32, 268, 410, 425
Fsp4HI GCNGC 9 cut(s) 125, 128, 131, 134, 189, 882, 1092, 1095, 1494
FspBI CTAG 4 cut(s) 920, 1362, 1482, 1500
FspI TGCGCA 1 cut(s) 1250
GlaI GCGC 1 cut(s) 1250
GluI GCNGC 9 cut(s) 125, 128, 131, 134, 189, 882, 1092, 1095, 1494
GsuI CTGGAG 1 cut(s) 1296
HaeIII GGCC 4 cut(s) 188, 232, 417, 1113
HapII CCGG 2 cut(s) 49, 270
HhaI GCGC 1 cut(s) 1251
Hin1II CATG 8 cut(s) 292, 678, 937, 1061, 1244, 1255, 1349, 1408
Hin6I GCGC 1 cut(s) 1249
HinP1I GCGC 1 cut(s) 1249
HincII GTYRAC 1 cut(s) 1398
HindII GTYRAC 1 cut(s) 1398
HinfI GANTC 3 cut(s) 17, 1053, 1310
HpaII CCGG 2 cut(s) 49, 270
HphI GGTGA 5 cut(s) 108, 185, 764, 788, 1478
Hpy166II GTNNAC 2 cut(s) 502, 1398
Hpy188I TCNGA 6 cut(s) 216, 336, 895, 1151, 1237, 1448
Hpy188III TCNNGA 8 cut(s) 76, 302, 514, 899, 992, 1157, 1214, 1275
Hpy8I GTNNAC 2 cut(s) 502, 1398
HpyAV CCTTC 5 cut(s) 129, 666, 679, 792, 909
HpyCH4III ACNGT 7 cut(s) 394, 446, 520, 573, 578, 1033, 1226
HpyCH4IV ACGT 2 cut(s) 56, 1073
HpyF10VI GCNNNNNNNGC 5 cut(s) 130, 133, 188, 355, 1246
HpyF3I CTNAG 3 cut(s) 215, 543, 1234
HpySE526I ACGT 2 cut(s) 56, 1073
Hsp92II CATG 8 cut(s) 292, 678, 937, 1061, 1244, 1255, 1349, 1408
HspAI GCGC 1 cut(s) 1249
Ksp22I TGATCA 1 cut(s) 988
LguI GCTCTTC 1 cut(s) 480
LmnI GCTCC 5 cut(s) 33, 141, 376, 387, 1417
Lsp1109I GCAGC 4 cut(s) 868, 1078, 1081, 1480
LweI GCATC 4 cut(s) 613, 1070, 1280, 1495
MaeI CTAG 4 cut(s) 920, 1362, 1482, 1500
MaeII ACGT 2 cut(s) 56, 1073
MaeIII GTNAC 6 cut(s) 41, 538, 645, 752, 886, 1033
MbiI CCGCTC 2 cut(s) 136, 191
MboII GAAGA 6 cut(s) 92, 188, 467, 596, 852, 1304
MflI RGATCY 3 cut(s) 204, 1210, 1478
MluCI AATT 4 cut(s) 725, 813, 971, 1299
MlyI GAGTC 2 cut(s) 26, 1304
MmeI TCCRAC 1 cut(s) 309
MnlI CCTC 9 cut(s) 24, 222, 403, 550, 743, 1271, 1280, 1402, 1431
Mph1103I ATGCAT 3 cut(s) 628, 1063, 1257
MseI TTAA 6 cut(s) 243, 701, 728, 759, 806, 1370
MslI CAYNNNNRTG 1 cut(s) 761
MspA1I CMGCKG 1 cut(s) 881
MspI CCGG 2 cut(s) 49, 270
MspR9I CCNGG 5 cut(s) 50, 184, 375, 438, 480
Mva1269I GAATGC 2 cut(s) 670, 1344
MvaI CCWGG 4 cut(s) 184, 375, 438, 480
MvnI CGCG 2 cut(s) 951, 999
MwoI GCNNNNNNNGC 5 cut(s) 130, 133, 188, 355, 1246
NciI CCSGG 1 cut(s) 50
NcoI CCATGG 1 cut(s) 933
NlaIII CATG 8 cut(s) 292, 678, 937, 1061, 1244, 1255, 1349, 1408
NlaIV GGNNCC 3 cut(s) 739, 931, 1212
NmeAIII GCCGAG 1 cut(s) 224
NmuCI GTSAC 3 cut(s) 41, 645, 752
NsbI TGCGCA 1 cut(s) 1250
NsiI ATGCAT 3 cut(s) 628, 1063, 1257
NspI RCATGY 2 cut(s) 1244, 1255
PaeI GCATGC 1 cut(s) 1255
PciSI GCTCTTC 1 cut(s) 480
PctI GAATGC 2 cut(s) 670, 1344
PfeI GAWTC 1 cut(s) 1053
PflFI GACNNNGTC 1 cut(s) 340
PfoI TCCNGGA 1 cut(s) 48
PkrI GCNGC 9 cut(s) 126, 129, 132, 135, 190, 883, 1093, 1096, 1495
Ple19I CGATCG 1 cut(s) 154
PleI GAGTC 2 cut(s) 25, 1304
PmaCI CACGTG 1 cut(s) 1074
PmlI CACGTG 1 cut(s) 1074
PpsI GAGTC 2 cut(s) 25, 1304
Ppu21I YACGTR 1 cut(s) 1074
PshBI ATTAAT 2 cut(s) 701, 759
Psp6I CCWGG 4 cut(s) 182, 373, 436, 478
PspCI CACGTG 1 cut(s) 1074
PspGI CCWGG 4 cut(s) 182, 373, 436, 478
PspN4I GGNNCC 3 cut(s) 739, 931, 1212
PspPI GGNCC 2 cut(s) 186, 1112
PstNI CAGNNNCTG 1 cut(s) 884
PsuI RGATCY 3 cut(s) 204, 1210, 1478
PsyI GACNNNGTC 1 cut(s) 340
PvuI CGATCG 1 cut(s) 154
PvuII CAGCTG 1 cut(s) 881
RsaI GTAC 2 cut(s) 5, 575
RsaNI GTAC 2 cut(s) 4, 574
RseI CAYNNNNRTG 1 cut(s) 761
SapI GCTCTTC 1 cut(s) 480
SaqAI TTAA 6 cut(s) 243, 701, 728, 759, 806, 1370
SatI GCNGC 9 cut(s) 125, 128, 131, 134, 189, 882, 1092, 1095, 1494
Sau96I GGNCC 2 cut(s) 186, 1112
SchI GAGTC 2 cut(s) 26, 1304
ScrFI CCNGG 5 cut(s) 50, 184, 375, 438, 480
SfaNI GCATC 4 cut(s) 613, 1070, 1280, 1495
SmiMI CAYNNNNRTG 1 cut(s) 761
SmlI CTYRAG 1 cut(s) 302
SmoI CTYRAG 1 cut(s) 302
SphI GCATGC 1 cut(s) 1255
Sse9I AATT 4 cut(s) 725, 813, 971, 1299
SsiI CCGC 9 cut(s) 14, 125, 128, 131, 134, 139, 189, 196, 951
SspMI CTAG 4 cut(s) 920, 1362, 1482, 1500
StyD4I CCNGG 5 cut(s) 48, 182, 373, 436, 478
StyI CCWWGG 1 cut(s) 933
TaaI ACNGT 7 cut(s) 394, 446, 520, 573, 578, 1033, 1226
TaiI ACGT 2 cut(s) 59, 1076
TaqI TCGA 1 cut(s) 154
TasI AATT 4 cut(s) 725, 813, 971, 1299
TatI WGTACW 2 cut(s) 3, 573
TauI GCSGC 5 cut(s) 127, 130, 133, 136, 191
TfiI GAWTC 1 cut(s) 1053
Tru1I TTAA 6 cut(s) 243, 701, 728, 759, 806, 1370
Tru9I TTAA 6 cut(s) 243, 701, 728, 759, 806, 1370
TscAI CASTG 4 cut(s) 399, 583, 696, 1087
TseFI GTSAC 3 cut(s) 41, 645, 752
TseI GCWGC 4 cut(s) 881, 1091, 1094, 1493
Tsp45I GTSAC 3 cut(s) 41, 645, 752
TspDTI ATGAA 9 cut(s) 242, 663, 833, 984, 998, 1116, 1311, 1334, 1445
TspGWI ACGGA 1 cut(s) 519
TspRI CASTG 4 cut(s) 399, 583, 696, 1087
Tth111I GACNNNGTC 1 cut(s) 340
VspI ATTAAT 2 cut(s) 701, 759
XapI RAATTY 1 cut(s) 971
XceI RCATGY 2 cut(s) 1244, 1255
XspI CTAG 4 cut(s) 920, 1362, 1482, 1500
Zsp2I ATGCAT 3 cut(s) 628, 1063, 1257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.