Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0005866

Physical Location & Seq

Genomic Coordinates Reverse (-)

3522947 .. 3529709

Gene Structure 6763 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g06130.t7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3030 bp

ATGGCGGTCAGGCTAACCACTTGGTTCGTCACCCAGGGGATTAGCATTTCCAGTTCCACCTCCACCTCCAGGCGCTCTCATAACTTCTCATTTGCTTCCTCTCCTGCTTCTTCTTCTTCTTCTCCTTCTTCTTCCTGTAAGCTCCGCCACCGCAATCTCAGTTGCACATGCCTGCAGAAGAGGCCGAGAGCTCGGAAGAAGTCCTCGCAGGGACAGTCTTCTTCTGCTGAGTTCCAGCCGAACGGCGAAGAAGACTTTGAATCCGAGACTGCTCCGGTGCCCGTTCTGAATTCCGAAAGCGTATCTGATGATGATGATGATGATGTTCATGTTATCAGCTCAAACGATTCGATTTCGAGTGCTCTCACTACATCTGATCAAGCAGCTCCATCGGATTTGGTTGGAATGATAAGGAATGCCGAGAAAAATATTCTTTTACTAAATCGAGCTCGAGTTAGTGCTCTTCAAGACCTTGACAAGATTTTATCCGAAAAGGAGGAGTTACAAGGAGAGATGAATGCTTTGGAGATGAGGCTGGCCGAGACTGATGCGCGGATCAGAGTGGCTGCTCAAGAGAAAGTCAAGATGGAGCTCTTGGGAGACCACTTGAACCAGGTGCGGAATGAACAGAATTTCAATGGTGGCAGTGCGGAGAGAAGCAACGGGGTTGAGATTTTTGAGAGTGAAAGCCAGTTATTTAATGAAGAAGCTCCATTGCCGTACAAAAGCAGCATCAACGCGCTTGTAGCCAATCTTACTTCATTGAGATTAGAAAATGTGTCGCTCAGGAATGACATACAGGAACTCCGGGAGGCGCTTAGTAATGTGAAAAATACGGATGAGCGTGTGGTCATGCTCGAAAAACAACGCTCGTCTTTGGAGTCATCCCTAAAAGAGCTGGAGTCGAAATTGTCAGTTTCTCAGGAAGATGTTTCCAAACTTTCCAATCTCAAAGTTGAATGCAAAGGTTTATGGGAAAAGGTGGAAAATTTGCAAGTAATGCTAGATAAGTCGACCAAGCAGGCAGATCAAGCTATTATAGTGTTACAGCAGAATCAGGAGATTCAAAAAAAGGTTGACAAATTAGAAGAATCTCTTGAAAAAGCTAATGTGTATAAGGAGTCGTCAGAAAAGATGCAACAGTATAATGAGCTTATGCAACAGAAGATTAAACTAATGGAGGATCGCCTTCAACGTTCGGATGAAGAGATACATTCTTATGTTCGGTTATATCAAGAATCTGTGGAGGAATTTCAAGATACCTTAAATACTCTAAAAGAAGAGAGCAAGAGAAGGGTGATGGATGAACCTGTTGATGATATGCCTTGGGAATATTGGAGCCGTTTATTGCTTATAATTGATGGTTGGTTGTTAGAAAAGAAAATATCGGTTGATGATGCAAAGGCATTGAGAGAAATGGTATGGAAGCGAGATCGACGGATTCATGACACATACATGGCATGCAAGGAAAAGAATGTAAATGAGGCTGTGACTACATTTCTCAGACTAATATCATCCCAAACAAGTTCAGGATTGCATGTCATTCATATCGCAGCAGAGATGGCGCCAGTTGCTAAGGTTGGTGGTTTGGGTGATGTTGTAGCTGGTCTTAGTAAAGCGTTGCAGAAGAAGGGACACCTTGTGGAAATTATTCTTCCCAAATATGATTGCATGGAGTATGATCGTGTTCGTGACCTAAGGGCCCTAGATGCGGCAGTAGAGTCGTACTTCGATGGTCGACTATTCAAGAATAAAATATGGGTTGGCACTGTTGAAGGTCTTCCCATATATTTTATTGAGCCTCTTCATCCCGATAAGCTCTTCTGGAGAGGACAATTTTATGGAGAACGTGATGATTTCAGACGTTTTTCTTATTTTAGTCGTGCAGCCCTTGAGTTGCTTCTTCAAGCTGGCAAGAAACCTGACATAATTCATTGTCATGATTGGCAGACAGCTTTCGTGGCTCCACTTTATTGGGACTTATATGCCCCAAAGGGATTAAACTCAGCTAGGATATGTTTCACCTGCCACAACTTTGAATACCAAGGAACGTCACCTGCTTCGGACTTGGCGTCTTGTGGTCTTGACGTCACCCAGCTAAACAGACCAGATAGAATGCAAGACAACTCAGCACATGATAGGATCAATCCTGTTAAGGGTGCAGTTGTATTTTCTAATATCGTGACAACGGTATCACCAACCTATGCGCAAGAGGTGCGGACTGCCGAGGGTGGACGTGGTCTCCATTCAACACTTAACTTTCATTCTAAAAAGTTCATTGGAATTCTCAATGGAATTGATGCTGATGCATGGAATCCTGCCACTGACGCATATCTCAAAGTACAGTACAGTGCTAATGATCTTGAGGGGAAAGCAGAAAATAAGGAAGCTATTAGAAAGAGTCTAGGGCTTTCTTCTGCCGATGTTAGGAGACCATTGGTGGGATGCATAACGAGATTGGTGCCACAGAAAGGTGTACATCTCATTAGACATGCGATTTATAGAACATTGGAGCTAGGTGGGCAGTTTATTCTACTGGGTTCAAGCCCAGTACATCATATTCAGAAGGAATTTGAGGCAATTGCAAACCATTTTGAGAATCATGATCATATTCGGTTGATATTGAAGTATGATGAAACTCTTTCCCATTCCATTTATGCTGCTTCTGATATGTTCATCGTCCCATCAATCTTTGAGCCCTGTGGACTTACACAGATGATAGCAATGAGATACGGTTCTATACCCATTGCAAGAAAAACTGGTGGTCTAAATGATAGTGTCTTTGATGTTGATGATGACACAGTACCTGTTCAGTTTCGAAATGGATATTCATTCTTATCTCCTGATGAACAGGGACTAAACGGTGCTTTGGAACGTGCATTTAAGCACTACCTAAGTAAGCCTGAGAGTTGGCGGCAGCTTGTTCAGAAGGATATGAACATAGATTTCAGTTGGGATACTTCTGCTTCACAGTACGAAGAACTCTACTCCAAGTCTGTGGCCAGAGCAAGGGCGACAGTTCGCCCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009507 GO:0009536 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019252 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 map00500 map01100 map01110 map02026

Pfam Domains

Protein Families

Glyco_transf_5 Glycos_transf_1

Protein Analysis

1010

Amino Acids

114.05

Weight (kDa)

5.74

Isoelectric Point (pI)

49.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	378 - 618	2.6e-66	Starch synthase catalytic domain
Glyco_transf_4	PF13439	392 - 605	4.1e-09	Glycosyltransferase Family 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18240
fragaria_vesca	FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130
malus_domestica	MD05G1289600.v1.1 MD10G1265500.v1.1
prunus_persica	Prupe.4G076100_v2.0.a1
pyrus_communis	pycom05g26670 pycom10g22140
rosa_chinensis	RchiOBHm_Chr5g0013241
rosa_laevigata	RLG00000032000
rosa_multiflora	Rmu_co8500739.1_g000001 Rmu_sc0004521.1_g000017
rosa_roxburghii	Rroxscaffold_1G00063270
rosa_rugosa	Rorug05G0008200.1 Rorug05G0008300.1 Rorug05G0008400
rosa_samantha	Rh5AG103000 Rh5BG099800 Rh5CG111200 Rh5DG098600
rosa_wichuraiana	Rw5G008990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1355
AarI	CACCTGC	2 cut(s)	2033, 2065
AatII	GACGTC	1 cut(s)	2091
Acc16I	TGCGCA	1 cut(s)	2208
Acc36I	ACCTGC	2 cut(s)	2033, 2065
AccB1I	GGYRCC	3 cut(s)	277, 1564, 2461
AccI	GTMKAC	2 cut(s)	1013, 1738
AccII	CGCG	2 cut(s)	553, 740
AciI	CCGC	9 cut(s)	5, 145, 151, 553, 619, 650, 1712, 2218, 2914
AclI	AACGTT	1 cut(s)	1195
AclWI	GGATC	3 cut(s)	563, 1191, 2150
AcoI	YGGCCR	2 cut(s)	537, 3000
AcsI	RAATTY	6 cut(s)	289, 631, 988, 1250, 2283, 2570
AcyI	GRCGYC	3 cut(s)	1565, 2072, 2088
AdeI	CACNNNGTG	1 cut(s)	1642
AfaI	GTAC	8 cut(s)	722, 1727, 2343, 2348, 2478, 2553, 2805, 2975
AfiI	CCNNNNNNNGG	7 cut(s)	69, 1711, 2156, 2427, 2441, 2471, 3009
AhdI	GACNNNNNGTC	1 cut(s)	2071
AjiI	CACGTC	1 cut(s)	2237
AjnI	CCWGG	3 cut(s)	33, 68, 612
Alw21I	GWGCWC	5 cut(s)	193, 364, 451, 463, 594
Alw26I	GTCTC	5 cut(s)	260, 536, 594, 2246, 2425
AlwI	GGATC	3 cut(s)	563, 1191, 2150
AlwNI	CAGNNNCTG	1 cut(s)	2807
Ama87I	CYCGRG	1 cut(s)	450
AoxI	GGCC	4 cut(s)	182, 537, 1701, 3000
ApaI	GGGCCC	1 cut(s)	1705
ApeKI	GCWGC	7 cut(s)	383, 566, 729, 1553, 1886, 2660, 2917
ApoI	RAATTY	6 cut(s)	289, 631, 988, 1250, 2283, 2570
Asp700I	GAANNNNTTC	2 cut(s)	1650, 1779
AspLEI	GCGC	6 cut(s)	75, 553, 742, 817, 1567, 2209
AspS9I	GGNCC	2 cut(s)	1701, 1702
AsuC2I	CCSGG	1 cut(s)	809
AsuHPI	GGTGA	7 cut(s)	22, 1309, 1604, 2014, 2046, 2083, 2187
AsuII	TTCGAA	1 cut(s)	2818
AvaI	CYCGRG	1 cut(s)	450
AxyI	CCTNAGG	1 cut(s)	1697
BaeGI	GKGCMC	2 cut(s)	282, 1705
BaeI	ACNNNNGTAYC	2 cut(s)	2175, 2208
BalI	TGGCCA	1 cut(s)	3002
BanI	GGYRCC	3 cut(s)	277, 1564, 2461
BanII	GRGCYC	5 cut(s)	193, 451, 594, 1705, 2700
BbsI	GAAGAC	3 cut(s)	210, 258, 1772
Bbv12I	GWGCWC	5 cut(s)	193, 364, 451, 463, 594
BbvI	GCAGC	7 cut(s)	395, 553, 741, 1565, 1898, 2647, 2929
BccI	CCATC	7 cut(s)	397, 580, 1294, 1355, 1555, 1727, 2692
BceAI	ACGGC	3 cut(s)	259, 703, 1326
BcgI	CGANNNNNNTGC	8 cut(s)	372, 406, 530, 564, 1704, 1738, 2443, 2477
BciT130I	CCWGG	3 cut(s)	35, 70, 614
BciVI	GTATCC	1 cut(s)	2950
BclI	TGATCA	2 cut(s)	376, 2605
BcnI	CCSGG	1 cut(s)	809
BcoDI	GTCTC	5 cut(s)	260, 536, 594, 2246, 2425
BfaI	CTAG	5 cut(s)	1004, 1706, 2010, 2405, 2516
BfmI	CTRYAG	1 cut(s)	173
BfoI	RGCGCY	3 cut(s)	76, 818, 1568
BfuAI	ACCTGC	2 cut(s)	2033, 2065
BfuI	GTATCC	1 cut(s)	2950
BisI	GCNGC	9 cut(s)	384, 567, 730, 1554, 1713, 1887, 2661, 2915, 2918
BlsI	GCNGC	9 cut(s)	385, 568, 731, 1555, 1714, 1888, 2662, 2916, 2919
Bme1390I	CCNGG	4 cut(s)	35, 70, 614, 809
BmeRI	GACNNNNNGTC	1 cut(s)	2071
BmeT110I	CYCGRG	1 cut(s)	450
BmgBI	CACGTC	1 cut(s)	2237
BmgT120I	GGNCC	2 cut(s)	1701, 1702
BmiI	GGNNCC	6 cut(s)	279, 1340, 1566, 1703, 1965, 2463
BmrFI	CCNGG	4 cut(s)	35, 70, 614, 809
BmrI	ACTGGG	2 cut(s)	2543, 2546
BmsI	GCATC	8 cut(s)	538, 741, 1125, 1387, 1699, 2290, 2296, 2435
BmuI	ACTGGG	2 cut(s)	2543, 2546
BpiI	GAAGAC	3 cut(s)	210, 258, 1772
BpmI	CTGGAG	3 cut(s)	52, 920, 1846
Bpu10I	CCTNAGC	2 cut(s)	785, 1575
Bpu14I	TTCGAA	1 cut(s)	2818
BpuEI	CTTGAG	3 cut(s)	555, 1913, 2384
BpuMI	CCSGG	1 cut(s)	809
BsaHI	GRCGYC	3 cut(s)	1565, 2072, 2088
BsaI	GGTCTC	3 cut(s)	594, 2246, 2425
BsaJI	CCNNGG	5 cut(s)	33, 34, 1325, 2044, 2226
BsaWI	WCCGGW	1 cut(s)	274
BsaXI	ACNNNNNCTCC	4 cut(s)	789, 819, 2226, 2256
Bsc4I	CCNNNNNNNGG	7 cut(s)	69, 1711, 2156, 2427, 2441, 2471, 3009
Bse1I	ACTGG	6 cut(s)	51, 691, 1568, 2541, 2549, 2764
Bse21I	CCTNAGG	1 cut(s)	1697
Bse3DI	GCAATG	3 cut(s)	713, 2730, 2745
BseBI	CCWGG	3 cut(s)	35, 70, 614
BseDI	CCNNGG	5 cut(s)	33, 34, 1325, 2044, 2226
BseGI	GGATG	7 cut(s)	844, 884, 1207, 1309, 1514, 1807, 2450
BseLI	CCNNNNNNNGG	7 cut(s)	69, 1711, 2156, 2427, 2441, 2471, 3009
BseMI	GCAATG	3 cut(s)	713, 2730, 2745
BseMII	CTCAG	8 cut(s)	172, 219, 799, 935, 1516, 2019, 2142, 2895
BseNI	ACTGG	6 cut(s)	51, 691, 1568, 2541, 2549, 2764
BseRI	GAGGAG	1 cut(s)	512
BseSI	GKGCMC	2 cut(s)	282, 1705
BseXI	GCAGC	7 cut(s)	395, 553, 741, 1565, 1898, 2647, 2929
BseYI	CCCAGC	1 cut(s)	2094
BsgI	GTGCAG	2 cut(s)	1905, 2181
Bsh1236I	CGCG	2 cut(s)	553, 740
BshFI	GGCC	4 cut(s)	184, 539, 1703, 3002
BshNI	GGYRCC	3 cut(s)	277, 1564, 2461
BsiHKAI	GWGCWC	5 cut(s)	193, 364, 451, 463, 594
BsiHKCI	CYCGRG	1 cut(s)	450
BsiSI	CCGG	2 cut(s)	275, 808
BslFI	GGGAC	5 cut(s)	225, 1647, 1991, 2666, 2868
BslI	CCNNNNNNNGG	7 cut(s)	69, 1711, 2156, 2427, 2441, 2471, 3009
BsmAI	GTCTC	5 cut(s)	260, 536, 594, 2246, 2425
BsmFI	GGGAC	5 cut(s)	225, 1647, 1991, 2666, 2868
BsmI	GAATGC	4 cut(s)	421, 523, 965, 2121
BsnI	GGCC	4 cut(s)	184, 539, 1703, 3002
Bso31I	GGTCTC	3 cut(s)	594, 2246, 2425
BsoBI	CYCGRG	1 cut(s)	450
Bsp119I	TTCGAA	1 cut(s)	2818
Bsp120I	GGGCCC	1 cut(s)	1701
Bsp1286I	GDGCHC	8 cut(s)	193, 282, 364, 451, 463, 594, 1705, 2700
Bsp1407I	TGTACA	1 cut(s)	2476
Bsp143I	GATC	9 cut(s)	376, 555, 1027, 1183, 1432, 1681, 2142, 2359, 2605
BspACI	CCGC	9 cut(s)	5, 145, 151, 553, 619, 650, 1712, 2218, 2914
BspANI	GGCC	4 cut(s)	184, 539, 1703, 3002
BspCNI	CTCAG	8 cut(s)	171, 220, 798, 934, 1515, 2018, 2141, 2896
BspFNI	CGCG	2 cut(s)	553, 740
BspHI	TCATGA	3 cut(s)	1444, 1939, 2602
BspLI	GGNNCC	6 cut(s)	279, 1340, 1566, 1703, 1965, 2463
BspMAI	CTGCAG	1 cut(s)	177
BspMI	ACCTGC	2 cut(s)	2033, 2065
BspPI	GGATC	3 cut(s)	563, 1191, 2150
BspQI	GCTCTTC	2 cut(s)	468, 1826
BspT104I	TTCGAA	1 cut(s)	2818
BspT107I	GGYRCC	3 cut(s)	277, 1564, 2461
BspTNI	GGTCTC	3 cut(s)	594, 2246, 2425
BsrDI	GCAATG	3 cut(s)	713, 2730, 2745
BsrGI	TGTACA	1 cut(s)	2476
BsrI	ACTGG	6 cut(s)	51, 691, 1568, 2541, 2549, 2764
BssECI	CCNNGG	5 cut(s)	33, 34, 1325, 2044, 2226
BssMI	GATC	9 cut(s)	376, 555, 1027, 1183, 1432, 1681, 2142, 2359, 2605
BssNI	GRCGYC	3 cut(s)	1565, 2072, 2088
BssT1I	CCWWGG	2 cut(s)	1325, 2044
Bst2UI	CCWGG	3 cut(s)	35, 70, 614
Bst6I	CTCTTC	6 cut(s)	173, 468, 1200, 1275, 1809, 1826
BstACI	GRCGYC	3 cut(s)	1565, 2072, 2088
BstAPI	GCANNNNNTGC	2 cut(s)	1000, 2215
BstAUI	TGTACA	1 cut(s)	2476
BstBI	TTCGAA	1 cut(s)	2818
BstC8I	GCNNGC	5 cut(s)	173, 537, 1023, 1462, 1912
BstF5I	GGATG	7 cut(s)	844, 884, 1207, 1309, 1514, 1807, 2450
BstFNI	CGCG	2 cut(s)	553, 740
BstH2I	RGCGCY	3 cut(s)	76, 818, 1568
BstHHI	GCGC	6 cut(s)	75, 553, 742, 817, 1567, 2209
BstKTI	GATC	9 cut(s)	379, 558, 1030, 1186, 1435, 1684, 2145, 2362, 2608
BstMAI	GTCTC	5 cut(s)	260, 536, 594, 2246, 2425
BstMBI	GATC	9 cut(s)	376, 555, 1027, 1183, 1432, 1681, 2142, 2359, 2605
BstNI	CCWGG	3 cut(s)	35, 70, 614
BstNSI	RCATGY	4 cut(s)	171, 1464, 1541, 2495
BstSCI	CCNGG	4 cut(s)	33, 68, 612, 807
BstSFI	CTRYAG	1 cut(s)	173
BstSLI	GKGCMC	2 cut(s)	282, 1705
BstUI	CGCG	2 cut(s)	553, 740
BstV1I	GCAGC	7 cut(s)	395, 553, 741, 1565, 1898, 2647, 2929
BstV2I	GAAGAC	3 cut(s)	210, 258, 1772
BstXI	CCANNNNNNTGG	2 cut(s)	1974, 2998
Bsu36I	CCTNAGG	1 cut(s)	1697
BsuI	GTATCC	1 cut(s)	2950
BsuRI	GGCC	4 cut(s)	184, 539, 1703, 3002
BtrI	CACGTC	1 cut(s)	2237
BtsCI	GGATG	7 cut(s)	844, 884, 1207, 1309, 1514, 1807, 2450
BtsI	GCAGTG	1 cut(s)	652
BtsIMutI	CAGTG	4 cut(s)	652, 1767, 2322, 2356
BveI	ACCTGC	2 cut(s)	2033, 2065
Cac8I	GCNNGC	5 cut(s)	173, 537, 1023, 1462, 1912
CaiI	CAGNNNCTG	1 cut(s)	2807
CciI	TCATGA	3 cut(s)	1444, 1939, 2602
CfoI	GCGC	6 cut(s)	75, 553, 742, 817, 1567, 2209
Cfr13I	GGNCC	2 cut(s)	1701, 1702
CseI	GACGC	2 cut(s)	2061, 2336
CsiI	ACCWGGT	1 cut(s)	612
Csp6I	GTAC	8 cut(s)	721, 1726, 2342, 2347, 2477, 2552, 2804, 2974
CviQI	GTAC	8 cut(s)	721, 1726, 2342, 2347, 2477, 2552, 2804, 2974
DinI	GGCGCC	1 cut(s)	1566
DpnI	GATC	9 cut(s)	378, 557, 1029, 1185, 1434, 1683, 2144, 2361, 2607
DpnII	GATC	9 cut(s)	376, 555, 1027, 1183, 1432, 1681, 2142, 2359, 2605
DraIII	CACNNNGTG	1 cut(s)	1642
DriI	GACNNNNNGTC	1 cut(s)	2071
EaeI	YGGCCR	2 cut(s)	537, 3000
Eam1104I	CTCTTC	6 cut(s)	173, 468, 1200, 1275, 1809, 1826
Eam1105I	GACNNNNNGTC	1 cut(s)	2071
EarI	CTCTTC	6 cut(s)	173, 468, 1200, 1275, 1809, 1826
EciI	GGCGGA	1 cut(s)	134
Ecl136II	GAGCTC	3 cut(s)	191, 449, 592
Eco130I	CCWWGG	2 cut(s)	1325, 2044
Eco24I	GRGCYC	5 cut(s)	193, 451, 594, 1705, 2700
Eco31I	GGTCTC	3 cut(s)	594, 2246, 2425
Eco53kI	GAGCTC	3 cut(s)	191, 449, 592
Eco81I	CCTNAGG	1 cut(s)	1697
Eco88I	CYCGRG	1 cut(s)	450
EcoICRI	GAGCTC	3 cut(s)	191, 449, 592
EcoO109I	RGGNCCY	2 cut(s)	1701, 1702
EcoRI	GAATTC	2 cut(s)	289, 2283
EcoRII	CCWGG	3 cut(s)	33, 68, 612
EcoT14I	CCWWGG	2 cut(s)	1325, 2044
EcoT22I	ATGCAT	2 cut(s)	2311, 2450
EcoT38I	GRGCYC	5 cut(s)	193, 451, 594, 1705, 2700
EgeI	GGCGCC	1 cut(s)	1566
EheI	GGCGCC	1 cut(s)	1566
ErhI	CCWWGG	2 cut(s)	1325, 2044
FalI	AAGNNNNNCTT	2 cut(s)	1080, 1112
FaqI	GGGAC	5 cut(s)	225, 1647, 1991, 2666, 2868
FbaI	TGATCA	2 cut(s)	376, 2605
FblI	GTMKAC	2 cut(s)	1013, 1738
Fnu4HI	GCNGC	9 cut(s)	384, 567, 730, 1554, 1713, 1887, 2661, 2915, 2918
FokI	GGATG	7 cut(s)	851, 871, 1214, 1316, 1501, 1794, 2457
FriOI	GRGCYC	5 cut(s)	193, 451, 594, 1705, 2700
Fsp4HI	GCNGC	9 cut(s)	384, 567, 730, 1554, 1713, 1887, 2661, 2915, 2918
FspBI	CTAG	5 cut(s)	1004, 1706, 2010, 2405, 2516
FspI	TGCGCA	1 cut(s)	2208
GlaI	GCGC	6 cut(s)	74, 552, 741, 816, 1566, 2208
GluI	GCNGC	9 cut(s)	384, 567, 730, 1554, 1713, 1887, 2661, 2915, 2918
GsaI	CCCAGC	1 cut(s)	2098
GsuI	CTGGAG	3 cut(s)	52, 920, 1846
HaeII	RGCGCY	3 cut(s)	76, 818, 1568
HaeIII	GGCC	4 cut(s)	184, 539, 1703, 3002
HapII	CCGG	2 cut(s)	275, 808
HgaI	GACGC	2 cut(s)	2061, 2336
HhaI	GCGC	6 cut(s)	75, 553, 742, 817, 1567, 2209
Hin1I	GRCGYC	3 cut(s)	1565, 2072, 2088
Hin6I	GCGC	6 cut(s)	73, 551, 740, 815, 1565, 2207
HinP1I	GCGC	6 cut(s)	73, 551, 740, 815, 1565, 2207
HincII	GTYRAC	3 cut(s)	1014, 1078, 1739
HindII	GTYRAC	3 cut(s)	1014, 1078, 1739
HpaII	CCGG	2 cut(s)	275, 808
HphI	GGTGA	7 cut(s)	22, 1309, 1604, 2014, 2046, 2083, 2187
Hpy166II	GTNNAC	6 cut(s)	1014, 1078, 1739, 2234, 2477, 2705
Hpy8I	GTNNAC	6 cut(s)	1014, 1078, 1739, 2234, 2477, 2705
Hpy99I	CGWCG	1 cut(s)	1440
HpyAV	CCTTC	7 cut(s)	135, 1199, 1287, 1624, 1769, 2560, 2923
HpyCH4IV	ACGT	7 cut(s)	1195, 1849, 1864, 2051, 2088, 2236, 2875
HpySE526I	ACGT	7 cut(s)	1195, 1849, 1864, 2051, 2088, 2236, 2875
Hsp92I	GRCGYC	3 cut(s)	1565, 2072, 2088
HspAI	GCGC	6 cut(s)	73, 551, 740, 815, 1565, 2207
KasI	GGCGCC	1 cut(s)	1564
Ksp22I	TGATCA	2 cut(s)	376, 2605
Kzo9I	GATC	9 cut(s)	376, 555, 1027, 1183, 1432, 1681, 2142, 2359, 2605
LguI	GCTCTTC	2 cut(s)	468, 1826
LmnI	GCTCC	8 cut(s)	147, 277, 391, 589, 715, 1338, 1969, 2512
Lsp1109I	GCAGC	7 cut(s)	395, 553, 741, 1565, 1898, 2647, 2929
LweI	GCATC	8 cut(s)	538, 741, 1125, 1387, 1699, 2290, 2296, 2435
MabI	ACCWGGT	1 cut(s)	612
MaeI	CTAG	5 cut(s)	1004, 1706, 2010, 2405, 2516
MaeII	ACGT	7 cut(s)	1195, 1849, 1864, 2051, 2088, 2236, 2875
MaeIII	GTNAC	8 cut(s)	28, 501, 1044, 1489, 1691, 2052, 2089, 2182
MalI	GATC	9 cut(s)	378, 557, 1029, 1185, 1434, 1683, 2144, 2361, 2607
MboI	GATC	9 cut(s)	376, 555, 1027, 1183, 1432, 1681, 2142, 2359, 2605
MfeI	CAATTG	1 cut(s)	2580
MhlI	GDGCHC	8 cut(s)	193, 282, 364, 451, 463, 594, 1705, 2700
MlsI	TGGCCA	1 cut(s)	3002
MluNI	TGGCCA	1 cut(s)	3002
Mly113I	GGCGCC	1 cut(s)	1565
MlyI	GAGTC	5 cut(s)	890, 911, 1130, 1730, 2410
MmeI	TCCRAC	1 cut(s)	382
Mox20I	TGGCCA	1 cut(s)	3002
Mph1103I	ATGCAT	2 cut(s)	2311, 2450
MroXI	GAANNNNTTC	2 cut(s)	1650, 1779
MscI	TGGCCA	1 cut(s)	3002
MseI	TTAA	7 cut(s)	699, 1170, 1265, 2000, 2154, 2256, 2883
MslI	CAYNNNNRTG	3 cut(s)	1218, 1454, 1938
Msp20I	TGGCCA	1 cut(s)	3002
MspI	CCGG	2 cut(s)	275, 808
MspR9I	CCNGG	4 cut(s)	35, 70, 614, 809
MunI	CAATTG	1 cut(s)	2580
Mva1269I	GAATGC	4 cut(s)	421, 523, 965, 2121
MvaI	CCWGG	3 cut(s)	35, 70, 614
MvnI	CGCG	2 cut(s)	553, 740
NarI	GGCGCC	1 cut(s)	1565
NciI	CCSGG	1 cut(s)	809
NdeII	GATC	9 cut(s)	376, 555, 1027, 1183, 1432, 1681, 2142, 2359, 2605
NlaIV	GGNNCC	6 cut(s)	279, 1340, 1566, 1703, 1965, 2463
NmeAIII	GCCGAG	4 cut(s)	210, 445, 565, 2251
NmuCI	GTSAC	6 cut(s)	28, 1489, 1691, 2052, 2089, 2182
NsbI	TGCGCA	1 cut(s)	2208
NsiI	ATGCAT	2 cut(s)	2311, 2450
NspI	RCATGY	4 cut(s)	171, 1464, 1541, 2495
NspV	TTCGAA	1 cut(s)	2818
PaeI	GCATGC	1 cut(s)	1464
PaeR7I	CTCGAG	1 cut(s)	450
PagI	TCATGA	3 cut(s)	1444, 1939, 2602
PaqCI	CACCTGC	2 cut(s)	2033, 2065
PasI	CCCWGGG	1 cut(s)	34
PciSI	GCTCTTC	2 cut(s)	468, 1826
PcsI	WCGNNNNNNNCGW	2 cut(s)	1192, 2069
PctI	GAATGC	4 cut(s)	421, 523, 965, 2121
PdmI	GAANNNNTTC	2 cut(s)	1650, 1779
PfeI	GAWTC	9 cut(s)	260, 347, 1054, 1063, 1091, 1238, 1441, 2314, 2599
PflFI	GACNNNGTC	1 cut(s)	2238
PfoI	TCCNGGA	1 cut(s)	807
PkrI	GCNGC	9 cut(s)	385, 568, 731, 1555, 1714, 1888, 2662, 2916, 2919
PleI	GAGTC	5 cut(s)	889, 910, 1129, 1729, 2409
PluTI	GGCGCC	1 cut(s)	1568
PpsI	GAGTC	5 cut(s)	889, 910, 1129, 1729, 2409
PsiI	TTATAA	1 cut(s)	1355
Psp124BI	GAGCTC	3 cut(s)	193, 451, 594
Psp1406I	AACGTT	1 cut(s)	1195
Psp6I	CCWGG	3 cut(s)	33, 68, 612
PspFI	CCCAGC	1 cut(s)	2094
PspGI	CCWGG	3 cut(s)	33, 68, 612
PspN4I	GGNNCC	6 cut(s)	279, 1340, 1566, 1703, 1965, 2463
PspOMI	GGGCCC	1 cut(s)	1701
PspPI	GGNCC	2 cut(s)	1701, 1702
PspXI	VCTCGAGB	1 cut(s)	450
PstI	CTGCAG	1 cut(s)	177
PstNI	CAGNNNCTG	1 cut(s)	2807
PsyI	GACNNNGTC	1 cut(s)	2238
RsaI	GTAC	8 cut(s)	722, 1727, 2343, 2348, 2478, 2553, 2805, 2975
RsaNI	GTAC	8 cut(s)	721, 1726, 2342, 2347, 2477, 2552, 2804, 2974
RseI	CAYNNNNRTG	3 cut(s)	1218, 1454, 1938
SacI	GAGCTC	3 cut(s)	193, 451, 594
SalI	GTCGAC	2 cut(s)	1012, 1737
SapI	GCTCTTC	2 cut(s)	468, 1826
SaqAI	TTAA	7 cut(s)	699, 1170, 1265, 2000, 2154, 2256, 2883
SatI	GCNGC	9 cut(s)	384, 567, 730, 1554, 1713, 1887, 2661, 2915, 2918
Sau3AI	GATC	9 cut(s)	376, 555, 1027, 1183, 1432, 1681, 2142, 2359, 2605
Sau96I	GGNCC	2 cut(s)	1701, 1702
SchI	GAGTC	5 cut(s)	890, 911, 1130, 1730, 2410
ScrFI	CCNGG	4 cut(s)	35, 70, 614, 809
SduI	GDGCHC	8 cut(s)	193, 282, 364, 451, 463, 594, 1705, 2700
SexAI	ACCWGGT	1 cut(s)	612
SfaNI	GCATC	8 cut(s)	538, 741, 1125, 1387, 1699, 2290, 2296, 2435
SfcI	CTRYAG	1 cut(s)	173
SfoI	GGCGCC	1 cut(s)	1566
Sfr274I	CTCGAG	1 cut(s)	450
SfuI	TTCGAA	1 cut(s)	2818
SlaI	CTCGAG	1 cut(s)	450
SmiMI	CAYNNNNRTG	3 cut(s)	1218, 1454, 1938
SmlI	CTYRAG	4 cut(s)	450, 570, 1892, 2363
SmoI	CTYRAG	4 cut(s)	450, 570, 1892, 2363
SphI	GCATGC	1 cut(s)	1464
SsiI	CCGC	9 cut(s)	5, 145, 151, 553, 619, 650, 1712, 2218, 2914
SspDI	GGCGCC	1 cut(s)	1564
SspI	AATATT	2 cut(s)	430, 1334
SspMI	CTAG	5 cut(s)	1004, 1706, 2010, 2405, 2516
SstI	GAGCTC	3 cut(s)	193, 451, 594
StyD4I	CCNGG	4 cut(s)	33, 68, 612, 807
StyI	CCWWGG	2 cut(s)	1325, 2044
TaiI	ACGT	7 cut(s)	1198, 1852, 1867, 2054, 2091, 2239, 2878
TatI	WGTACW	4 cut(s)	2341, 2346, 2476, 2551
TauI	GCSGC	2 cut(s)	1715, 2917
TfiI	GAWTC	9 cut(s)	260, 347, 1054, 1063, 1091, 1238, 1441, 2314, 2599
Tru1I	TTAA	7 cut(s)	699, 1170, 1265, 2000, 2154, 2256, 2883
Tru9I	TTAA	7 cut(s)	699, 1170, 1265, 2000, 2154, 2256, 2883
TscAI	CASTG	4 cut(s)	652, 1774, 2329, 2356
TseFI	GTSAC	6 cut(s)	28, 1489, 1691, 2052, 2089, 2182
TseI	GCWGC	7 cut(s)	383, 566, 729, 1553, 1886, 2660, 2917
Tsp45I	GTSAC	6 cut(s)	28, 1489, 1691, 2052, 2089, 2182
TspGWI	ACGGA	2 cut(s)	851, 1453
TspRI	CASTG	4 cut(s)	652, 1774, 2329, 2356
Tth111I	GACNNNGTC	1 cut(s)	2238
XapI	RAATTY	6 cut(s)	289, 631, 988, 1250, 2283, 2570
XceI	RCATGY	4 cut(s)	171, 1464, 1541, 2495
XhoI	CTCGAG	1 cut(s)	450
XmiI	GTMKAC	2 cut(s)	1013, 1738
XmnI	GAANNNNTTC	2 cut(s)	1650, 1779
XspI	CTAG	5 cut(s)	1004, 1706, 2010, 2405, 2516
ZraI	GACGTC	1 cut(s)	2089
Zsp2I	ATGCAT	2 cut(s)	2311, 2450

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.