Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0005866

Physical Location & Seq

Genomic Coordinates Forward (+)

9509633 .. 9515918

Gene Structure 6286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG103000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3027 bp

ATGGCGGTGAGGCTAACCACCTGGTTTGTGAGCCAGGGGATTAGCATTTCCGGTTCAAACTCCAGGCGCTCACATTCAAATCCGCGCTTCTCATTTGCTTCCTCCTCTCCTGCTTCTTCTTCTTCTTCTTCGTCCTGTAAGCTACGCCACCGGAATCTCAGTTGTACTTGCCTGCAGAAGAGGCAAAGAGCTAGGAAGAGATCCTCTCAGGAACAGTCTTCTGCGGATTTCCTGCCAAGTGGCGAAGAGGACTCTGAATCGGAGACTGCTTCGGTCGGCATGGTCCCTCTCTTGAGCTCAGAAAGCGTATCTGATGATGATGTTAATACTATCAATTCAAACGATTCGATTTTGAATGCTCTCACTACATCTGATCAAGCAGCACCTTCGGATTTGGTTGGAATGATAAGGAATGCGGAGAAAAATATTCTTCTCTTGAATCAAGCTCGGGTTAGTGCTCTTCAAGACATTGACAAGATTCTATCTGAAAAGGAAGAATTGCAAGGAGAAATGAATGCTTTGGAAATGAGATTGGCAGAGACTGATGCACGTATCAGAGTGGCTGCTCAAGAGAAAGTAAGGATGGAACTCCTCGGAGACCACTTAAACCAGATGCGGAATGAACAGAATTTCAATGGTGATGGTGCGGAAACAAGCAATGGGGTTGAGATTTTTGAGAGTGAAAGTGAGCTATTTAATGAAGAAGCTCCTTTGCCATACAAAAGTAGCATCAATTCGCTTGTAGCAAATCTTAGTTCATTGCGATTAGAAAATGTGTCACTTAGGAATGATATACAGGAACTCAGAGAGGAGCTTAGTAATATGAAAAATACGGATGAACGTGTGGTCATGCTTGAAAAACAACGTTCGTCTTTGGAGTCTGCCCTAAAAGATTTGGAGTCCAAATTGGTAGTTTCTCAGGAAGATGTTTCCAAACTTTCCAATCTGAAGGTTGAATGCAAAGGTTTATGGGAAAAGGTGGAGAACTTGCAAGTACTGCTAGATAAGTCGACCAAGCAGGCAGATCAAGCTATTATAGTGTTACAGCAAAATCAGGAGATTCGAAAAAAGGTTGATAAATTAGAAGAATCTCTTGAAAAAGCTAATGTGTATAAGGAGTCATCAGAAAAGATGCAACAGTATAATGAGCTTATGCAACAAAAGATACAACTAATGGAGGACCGGCTTCAGCGTTCGGATGAAGAGATACATTCTTATGTTCAGTTATATCAAGAATCTGTGGAGGAATTTCAAGATACCTTAAATACTCTAAAAGAAGAAAGCAAGAGAAGGGTGATGGATGAACCTGTTGATGACATGCCTTGGGAATTTTGGAGCCGTTTATTGCTTATAATAGATGGTTGGTTGTTGGAAAAGAAAATATCAATTGATGATGCAAAGGCGTTGAGAGAAATGGTATGGAAGAGAGATCGACGGATTCATGACTCATACATGGCATGCAAGGAAAAGAATGTAAATGAGGCTGTGACTACATTTCTCAGACTGATATCATCACAAACAAGTTCAGGATTGCATGTCGTTCATATCGCAGCAGAGATGGCACCAGTTGCTAAGGTCGGTGGTTTGGGTGATGTTGTAGCTGGTCTTTGTAAAGCATTGCAGAAGAAGGGACACCTTGTGGAAATTATTCTTCCCAAATATGATTGCATGGAGTACGATCGTGTTCGTGACCTAAGGGCCCTAGATGTGGCAGTAGAGTCGTACTTCGATGGTCGACTATTCAAGAATAAAATCTGGGTTGGCACTGTTGAAGGTCTTCCTGTATATTTTATTGAGCCTCTTCATCCCGATAAGCTCTTCTGGAGAGGACAGTTCTATGGAGAACGTGATGATTTCAAACGTTTTTCCTTCTTCAGTCGTGCAGCCCTTGAGTTACTTCTTCAAGCTGGCAAGAAACCTGACATTATTCATTGTCATGATTGGCAGACAGCTTTCGTGGCTCCACTTTATTGGGACTTATATGCCCCAAAGGGTTTAAACTCGGCTAGGATATGTTTTACCTGCCACAACTTTGAATACCAAGGGACTGCACCTGCTTCAGACTTGGCTTCTTGTGGTCTTGATGTCGGCCAGCTAAACAGACCAGATAGAATGCAGGACAACTCAGCACATGATAGGATCAATCCGGTTAAGGGTGCAGTTGTATTCTCTAATATCGTGACAACGGTATCACCTACCTATGCGCAAGAGGTGCGGAGCGCTGAGGGTGGACGTGGTCTCCATTCAACACTTAATTTTCATTCTAAAAAGTTCGTTGGAATTCTCAATGGAATTGATGCTGATGCATGGAATCCTGCCACTGATGCATATCTCAAAGTACAGTACACTGCCAATGATCTTGGGGGGAAAGCAGAAAATAAGGAAGCTATTAGAAAGAGTCTAGGGCTTTCATATGCCGATGTCAGGAGACCATTGGTGGGATGCATAACGAGATTGGTGCCACAGAAAGGTGTACATCTCATCAGACATGCGATTTATAGAACATTGGAGCTAGGAGGGCAGTTTGTTCTTCTGGGTTCAAGTCCAGTACATCATATTCAGAAGGAATTTGAGGCAATTGCAAACCATTTTCAGAGTCATGATCATATTAGGTTGATATTGAAGTATGATGAAACTCTTTCCCATTCCATTTATGCTGCTTCTGATATGTTCATCGTTCCATCAATCTTTGAGCCTTGTGGACTTACACAGATGATAGCAATGAGATATGGTTCTATACCCATTGCAAGAAAAACTGGTGGACTAAATGATAGTGTCTTTGATGTTGATGATGACACCGTACCTCTTCAGTTTCGAAATGGATATTCATTTTTGTCTCCTGATGAACAGGGGCTAAATGGTGCTTTGGAACGTGCATTTAACCACTACCTAAGTAAGCCTGAGAGTTGGCGGCAGCTTGTTCAGAAGGATATGAACATAGATTTCAGTTGGGATACTTCTGCTTCACAGTACGAAGAACTCTACTCTAAGTCCGTGGCCAGAGCAAGGGCGACAATTCGCCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009507 GO:0009536 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019252 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 map00500 map01100 map01110 map02026

Pfam Domains

Protein Families

Glyco_transf_5 Glycos_transf_1

Protein Analysis

1008

Amino Acids

113.9

Weight (kDa)

5.63

Isoelectric Point (pI)

50.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	512 - 752	3.8e-66	Starch synthase catalytic domain
Glyco_transf_4	PF13439	526 - 740	7.1e-09	Glycosyltransferase Family 4
Glyco_trans_4_4	PF13579	527 - 677	6.3e-06	Glycosyl transferase 4-like domain
Glycos_transf_1	PF00534	809 - 970	9.3e-10	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	811 - 929	5.7e-09	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18240
fragaria_vesca	FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130
malus_domestica	MD05G1289600.v1.1 MD10G1265500.v1.1
prunus_persica	Prupe.4G076100_v2.0.a1
pyrus_communis	pycom05g26670 pycom10g22140
rosa_chinensis	RchiOBHm_Chr5g0013241
rosa_laevigata	RLG00000032000
rosa_multiflora	Rmu_co8500739.1_g000001 Rmu_sc0004521.1_g000017
rosa_roxburghii	Rroxscaffold_1G00063270
rosa_rugosa	Rorug05G0008200.1 Rorug05G0008300.1 Rorug05G0008400
rosa_samantha	Rh5AG103000 Rh5BG099800 Rh5CG111200 Rh5DG098600
rosa_wichuraiana	Rw5G008990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1352
AarI	CACCTGC	1 cut(s)	2062
Acc16I	TGCGCA	1 cut(s)	2205
Acc36I	ACCTGC	2 cut(s)	2030, 2062
AccB1I	GGYRCC	2 cut(s)	1561, 2458
AccI	GTMKAC	2 cut(s)	1010, 1735
AccII	CGCG	1 cut(s)	85
AciI	CCGC	8 cut(s)	5, 83, 224, 416, 616, 647, 2215, 2911
AclI	AACGTT	2 cut(s)	865, 1861
AclWI	GGATC	2 cut(s)	195, 2147
AcoI	YGGCCR	2 cut(s)	2089, 2997
AcsI	RAATTY	5 cut(s)	628, 1247, 1328, 2280, 2567
AcuI	CTGAAG	5 cut(s)	968, 1172, 1858, 2043, 2792
AdeI	CACNNNGTG	1 cut(s)	1639
AfeI	AGCGCT	1 cut(s)	2221
AfiI	CCNNNNNNNGG	6 cut(s)	1708, 2153, 2424, 2438, 2468, 3006
AflIII	ACRYGT	1 cut(s)	841
AjiI	CACGTC	1 cut(s)	2234
AjnI	CCWGG	3 cut(s)	20, 33, 62
Alw21I	GWGCWC	2 cut(s)	299, 460
Alw26I	GTCTC	6 cut(s)	257, 533, 591, 2243, 2422, 2841
AlwI	GGATC	2 cut(s)	195, 2147
AlwNI	CAGNNNCTG	1 cut(s)	542
Ama87I	CYCGRG	1 cut(s)	447
Aor51HI	AGCGCT	1 cut(s)	2221
AoxI	GGCC	3 cut(s)	1698, 2089, 2997
ApaI	GGGCCC	1 cut(s)	1702
ApeKI	GCWGC	6 cut(s)	380, 563, 1550, 1883, 2657, 2914
ApoI	RAATTY	5 cut(s)	628, 1247, 1328, 2280, 2567
Asp700I	GAANNNNTTC	2 cut(s)	1647, 1776
AspLEI	GCGC	4 cut(s)	69, 87, 2206, 2222
AspS9I	GGNCC	4 cut(s)	283, 1180, 1698, 1699
AsuHPI	GGTGA	5 cut(s)	19, 650, 1306, 1601, 2184
AsuII	TTCGAA	2 cut(s)	1063, 2815
AvaI	CYCGRG	1 cut(s)	447
AvaII	GGWCC	2 cut(s)	283, 1180
AxyI	CCTNAGG	1 cut(s)	1694
BaeGI	GKGCMC	1 cut(s)	1702
BaeI	ACNNNNGTAYC	2 cut(s)	2172, 2205
BalI	TGGCCA	1 cut(s)	2999
BanI	GGYRCC	2 cut(s)	1561, 2458
BanII	GRGCYC	2 cut(s)	299, 1702
BbsI	GAAGAC	2 cut(s)	210, 1769
Bbv12I	GWGCWC	2 cut(s)	299, 460
BbvCI	CCTCAGC	1 cut(s)	2223
BbvI	GCAGC	6 cut(s)	392, 550, 1562, 1895, 2644, 2926
BccI	CCATC	7 cut(s)	577, 635, 1291, 1352, 1552, 1724, 2689
BceAI	ACGGC	1 cut(s)	1323
BcgI	CGANNNNNNTGC	6 cut(s)	369, 403, 1701, 1735, 2440, 2474
BciT130I	CCWGG	3 cut(s)	22, 35, 64
BciVI	GTATCC	1 cut(s)	2947
BclI	TGATCA	2 cut(s)	373, 2602
BcoDI	GTCTC	6 cut(s)	257, 533, 591, 2243, 2422, 2841
BfaI	CTAG	6 cut(s)	192, 1001, 1703, 2007, 2402, 2513
BfmI	CTRYAG	1 cut(s)	173
BfoI	RGCGCY	2 cut(s)	70, 2223
BfuAI	ACCTGC	2 cut(s)	2030, 2062
BfuI	GTATCC	1 cut(s)	2947
BisI	GCNGC	7 cut(s)	381, 564, 1551, 1884, 2658, 2912, 2915
BlsI	GCNGC	7 cut(s)	382, 565, 1552, 1885, 2659, 2913, 2916
BmcAI	AGTACT	1 cut(s)	996
Bme1390I	CCNGG	3 cut(s)	22, 35, 64
Bme18I	GGWCC	2 cut(s)	283, 1180
BmeT110I	CYCGRG	1 cut(s)	447
BmgBI	CACGTC	1 cut(s)	2234
BmgT120I	GGNCC	4 cut(s)	283, 1180, 1698, 1699
BmiI	GGNNCC	6 cut(s)	285, 1337, 1563, 1700, 1962, 2460
BmrFI	CCNGG	3 cut(s)	22, 35, 64
BmsI	GCATC	9 cut(s)	535, 603, 738, 1122, 1384, 2287, 2293, 2314, 2432
BpiI	GAAGAC	2 cut(s)	210, 1769
BplI	GAGNNNNNCTC	2 cut(s)	190, 222
BpmI	CTGGAG	2 cut(s)	46, 1843
Bpu10I	CCTNAGC	2 cut(s)	1572, 2223
Bpu14I	TTCGAA	2 cut(s)	1063, 2815
BpuEI	CTTGAG	3 cut(s)	313, 552, 1910
BsaAI	YACGTR	1 cut(s)	551
BsaBI	GATNNNNATC	1 cut(s)	2328
BsaI	GGTCTC	3 cut(s)	591, 2243, 2422
BsaJI	CCNNGG	5 cut(s)	34, 592, 1322, 2041, 2994
BsaWI	WCCGGW	3 cut(s)	50, 150, 2146
BsaXI	ACNNNNNCTCC	2 cut(s)	2223, 2253
Bsc4I	CCNNNNNNNGG	6 cut(s)	1708, 2153, 2424, 2438, 2468, 3006
Bse118I	RCCGGY	1 cut(s)	1182
Bse1I	ACTGG	3 cut(s)	1565, 2546, 2761
Bse21I	CCTNAGG	1 cut(s)	1694
Bse3DI	GCAATG	5 cut(s)	664, 758, 1616, 2727, 2742
Bse8I	GATNNNNATC	1 cut(s)	2328
BseBI	CCWGG	3 cut(s)	22, 35, 64
BseDI	CCNNGG	5 cut(s)	34, 592, 1322, 2041, 2994
BseGI	GGATG	6 cut(s)	588, 841, 1204, 1306, 1804, 2447
BseJI	GATNNNNATC	1 cut(s)	2328
BseLI	CCNNNNNNNGG	6 cut(s)	1708, 2153, 2424, 2438, 2468, 3006
BseMI	GCAATG	5 cut(s)	664, 758, 1616, 2727, 2742
BseMII	CTCAG	9 cut(s)	172, 221, 312, 817, 932, 1513, 2139, 2214, 2892
BseNI	ACTGG	3 cut(s)	1565, 2546, 2761
BseRI	GAGGAG	3 cut(s)	94, 581, 824
BseSI	GKGCMC	1 cut(s)	1702
BseXI	GCAGC	6 cut(s)	392, 550, 1562, 1895, 2644, 2926
BsgI	GTGCAG	3 cut(s)	1902, 2034, 2178
Bsh1236I	CGCG	1 cut(s)	85
Bsh1285I	CGRYCG	2 cut(s)	276, 1681
BshFI	GGCC	3 cut(s)	1700, 2091, 2999
BshNI	GGYRCC	2 cut(s)	1561, 2458
BsiEI	CGRYCG	2 cut(s)	276, 1681
BsiHKAI	GWGCWC	2 cut(s)	299, 460
BsiHKCI	CYCGRG	1 cut(s)	447
BsiSI	CCGG	4 cut(s)	51, 151, 1183, 2147
BslFI	GGGAC	4 cut(s)	269, 1644, 1988, 2059
BslI	CCNNNNNNNGG	6 cut(s)	1708, 2153, 2424, 2438, 2468, 3006
BsmAI	GTCTC	6 cut(s)	257, 533, 591, 2243, 2422, 2841
BsmFI	GGGAC	4 cut(s)	269, 1644, 1988, 2059
BsmI	GAATGC	5 cut(s)	361, 418, 520, 962, 2118
BsnI	GGCC	3 cut(s)	1700, 2091, 2999
Bso31I	GGTCTC	3 cut(s)	591, 2243, 2422
BsoBI	CYCGRG	1 cut(s)	447
Bsp119I	TTCGAA	2 cut(s)	1063, 2815
Bsp120I	GGGCCC	1 cut(s)	1698
Bsp1286I	GDGCHC	3 cut(s)	299, 460, 1702
Bsp1407I	TGTACA	1 cut(s)	2473
Bsp143I	GATC	8 cut(s)	200, 373, 1024, 1429, 1678, 2139, 2356, 2602
BspACI	CCGC	8 cut(s)	5, 83, 224, 416, 616, 647, 2215, 2911
BspANI	GGCC	3 cut(s)	1700, 2091, 2999
BspCNI	CTCAG	9 cut(s)	171, 220, 311, 816, 931, 1512, 2138, 2215, 2893
BspFNI	CGCG	1 cut(s)	85
BspHI	TCATGA	3 cut(s)	1441, 1936, 2599
BspLI	GGNNCC	6 cut(s)	285, 1337, 1563, 1700, 1962, 2460
BspMAI	CTGCAG	1 cut(s)	177
BspMI	ACCTGC	2 cut(s)	2030, 2062
BspPI	GGATC	2 cut(s)	195, 2147
BspQI	GCTCTTC	2 cut(s)	465, 1823
BspT104I	TTCGAA	2 cut(s)	1063, 2815
BspT107I	GGYRCC	2 cut(s)	1561, 2458
BspTNI	GGTCTC	3 cut(s)	591, 2243, 2422
BsrDI	GCAATG	5 cut(s)	664, 758, 1616, 2727, 2742
BsrFI	RCCGGY	1 cut(s)	1182
BsrGI	TGTACA	1 cut(s)	2473
BsrI	ACTGG	3 cut(s)	1565, 2546, 2761
BssAI	RCCGGY	1 cut(s)	1182
BssECI	CCNNGG	5 cut(s)	34, 592, 1322, 2041, 2994
BssMI	GATC	8 cut(s)	200, 373, 1024, 1429, 1678, 2139, 2356, 2602
BssT1I	CCWWGG	2 cut(s)	1322, 2041
Bst2UI	CCWGG	3 cut(s)	22, 35, 64
Bst4CI	ACNGT	8 cut(s)	216, 1140, 1768, 1833, 2188, 2343, 2800, 2970
Bst6I	CTCTTC	9 cut(s)	173, 191, 240, 465, 1197, 1418, 1806, 1823, 2811
BstAPI	GCANNNNNTGC	3 cut(s)	997, 1568, 2212
BstAUI	TGTACA	1 cut(s)	2473
BstBAI	YACGTR	1 cut(s)	551
BstBI	TTCGAA	2 cut(s)	1063, 2815
BstC8I	GCNNGC	5 cut(s)	173, 1020, 1459, 1909, 2093
BstDSI	CCRYGG	1 cut(s)	2994
BstF5I	GGATG	6 cut(s)	588, 841, 1204, 1306, 1804, 2447
BstFNI	CGCG	1 cut(s)	85
BstH2I	RGCGCY	2 cut(s)	70, 2223
BstHHI	GCGC	4 cut(s)	69, 87, 2206, 2222
BstKTI	GATC	8 cut(s)	203, 376, 1027, 1432, 1681, 2142, 2359, 2605
BstMAI	GTCTC	6 cut(s)	257, 533, 591, 2243, 2422, 2841
BstMBI	GATC	8 cut(s)	200, 373, 1024, 1429, 1678, 2139, 2356, 2602
BstMCI	CGRYCG	2 cut(s)	276, 1681
BstNI	CCWGG	3 cut(s)	22, 35, 64
BstNSI	RCATGY	4 cut(s)	1321, 1461, 1538, 2492
BstSCI	CCNGG	3 cut(s)	20, 33, 62
BstSFI	CTRYAG	1 cut(s)	173
BstSLI	GKGCMC	1 cut(s)	1702
BstUI	CGCG	1 cut(s)	85
BstV1I	GCAGC	6 cut(s)	392, 550, 1562, 1895, 2644, 2926
BstV2I	GAAGAC	2 cut(s)	210, 1769
BstX2I	RGATCY	1 cut(s)	200
BstXI	CCANNNNNNTGG	1 cut(s)	1971
BstYI	RGATCY	1 cut(s)	200
Bsu36I	CCTNAGG	1 cut(s)	1694
BsuI	GTATCC	1 cut(s)	2947
BsuRI	GGCC	3 cut(s)	1700, 2091, 2999
BtgI	CCRYGG	1 cut(s)	2994
BtrI	CACGTC	1 cut(s)	2234
BtsCI	GGATG	6 cut(s)	588, 841, 1204, 1306, 1804, 2447
BtsI	GCAGTG	1 cut(s)	2346
BtsIMutI	CAGTG	3 cut(s)	1764, 2319, 2346
BveI	ACCTGC	2 cut(s)	2030, 2062
Cac8I	GCNNGC	5 cut(s)	173, 1020, 1459, 1909, 2093
CaiI	CAGNNNCTG	1 cut(s)	542
CciI	TCATGA	3 cut(s)	1441, 1936, 2599
CfoI	GCGC	4 cut(s)	69, 87, 2206, 2222
Cfr10I	RCCGGY	1 cut(s)	1182
Cfr13I	GGNCC	4 cut(s)	283, 1180, 1698, 1699
CsiI	ACCWGGT	1 cut(s)	20
CspCI	CAANNNNNGTGG	2 cut(s)	7, 42
DpnI	GATC	8 cut(s)	202, 375, 1026, 1431, 1680, 2141, 2358, 2604
DpnII	GATC	8 cut(s)	200, 373, 1024, 1429, 1678, 2139, 2356, 2602
DraI	TTTAAA	1 cut(s)	1998
DraIII	CACNNNGTG	1 cut(s)	1639
EaeI	YGGCCR	2 cut(s)	2089, 2997
Eam1104I	CTCTTC	9 cut(s)	173, 191, 240, 465, 1197, 1418, 1806, 1823, 2811
EarI	CTCTTC	9 cut(s)	173, 191, 240, 465, 1197, 1418, 1806, 1823, 2811
Ecl136II	GAGCTC	1 cut(s)	297
Eco130I	CCWWGG	2 cut(s)	1322, 2041
Eco24I	GRGCYC	2 cut(s)	299, 1702
Eco31I	GGTCTC	3 cut(s)	591, 2243, 2422
Eco32I	GATATC	1 cut(s)	1509
Eco47I	GGWCC	2 cut(s)	283, 1180
Eco47III	AGCGCT	1 cut(s)	2221
Eco53kI	GAGCTC	1 cut(s)	297
Eco57I	CTGAAG	5 cut(s)	968, 1172, 1858, 2043, 2792
Eco81I	CCTNAGG	1 cut(s)	1694
Eco88I	CYCGRG	1 cut(s)	447
EcoICRI	GAGCTC	1 cut(s)	297
EcoO109I	RGGNCCY	2 cut(s)	1698, 1699
EcoRI	GAATTC	1 cut(s)	2280
EcoRII	CCWGG	3 cut(s)	20, 33, 62
EcoRV	GATATC	1 cut(s)	1509
EcoT14I	CCWWGG	2 cut(s)	1322, 2041
EcoT22I	ATGCAT	3 cut(s)	2308, 2329, 2447
EcoT38I	GRGCYC	2 cut(s)	299, 1702
ErhI	CCWWGG	2 cut(s)	1322, 2041
FalI	AAGNNNNNCTT	2 cut(s)	1077, 1109
FaqI	GGGAC	4 cut(s)	269, 1644, 1988, 2059
FauNDI	CATATG	1 cut(s)	2413
FbaI	TGATCA	2 cut(s)	373, 2602
FblI	GTMKAC	2 cut(s)	1010, 1735
Fnu4HI	GCNGC	7 cut(s)	381, 564, 1551, 1884, 2658, 2912, 2915
FokI	GGATG	6 cut(s)	595, 848, 1211, 1313, 1791, 2454
FriOI	GRGCYC	2 cut(s)	299, 1702
Fsp4HI	GCNGC	7 cut(s)	381, 564, 1551, 1884, 2658, 2912, 2915
FspBI	CTAG	6 cut(s)	192, 1001, 1703, 2007, 2402, 2513
FspI	TGCGCA	1 cut(s)	2205
GlaI	GCGC	4 cut(s)	68, 86, 2205, 2221
GluI	GCNGC	7 cut(s)	381, 564, 1551, 1884, 2658, 2912, 2915
GsuI	CTGGAG	2 cut(s)	46, 1843
HaeII	RGCGCY	2 cut(s)	70, 2223
HaeIII	GGCC	3 cut(s)	1700, 2091, 2999
HapII	CCGG	4 cut(s)	51, 151, 1183, 2147
HhaI	GCGC	4 cut(s)	69, 87, 2206, 2222
Hin6I	GCGC	4 cut(s)	67, 85, 2204, 2220
HinP1I	GCGC	4 cut(s)	67, 85, 2204, 2220
HincII	GTYRAC	2 cut(s)	1011, 1736
HindII	GTYRAC	2 cut(s)	1011, 1736
HpaII	CCGG	4 cut(s)	51, 151, 1183, 2147
HphI	GGTGA	5 cut(s)	19, 650, 1306, 1601, 2184
Hpy166II	GTNNAC	7 cut(s)	1011, 1736, 2231, 2346, 2474, 2702, 2762
Hpy8I	GTNNAC	7 cut(s)	1011, 1736, 2231, 2346, 2474, 2702, 2762
Hpy99I	CGWCG	1 cut(s)	1437
HpyAV	CCTTC	8 cut(s)	396, 943, 1284, 1621, 1766, 1879, 2557, 2920
HpyCH4III	ACNGT	8 cut(s)	216, 1140, 1768, 1833, 2188, 2343, 2800, 2970
HpyCH4IV	ACGT	7 cut(s)	550, 841, 865, 1846, 1861, 2233, 2872
HpySE526I	ACGT	7 cut(s)	550, 841, 865, 1846, 1861, 2233, 2872
HspAI	GCGC	4 cut(s)	67, 85, 2204, 2220
Ksp22I	TGATCA	2 cut(s)	373, 2602
Kzo9I	GATC	8 cut(s)	200, 373, 1024, 1429, 1678, 2139, 2356, 2602
LguI	GCTCTTC	2 cut(s)	465, 1823
LmnI	GCTCC	6 cut(s)	712, 811, 1335, 1966, 2217, 2509
Lsp1109I	GCAGC	6 cut(s)	392, 550, 1562, 1895, 2644, 2926
LweI	GCATC	9 cut(s)	535, 603, 738, 1122, 1384, 2287, 2293, 2314, 2432
MabI	ACCWGGT	1 cut(s)	20
MaeI	CTAG	6 cut(s)	192, 1001, 1703, 2007, 2402, 2513
MaeII	ACGT	7 cut(s)	550, 841, 865, 1846, 1861, 2233, 2872
MaeIII	GTNAC	6 cut(s)	777, 1041, 1486, 1688, 1893, 2179
MalI	GATC	8 cut(s)	202, 375, 1026, 1431, 1680, 2141, 2358, 2604
MboI	GATC	8 cut(s)	200, 373, 1024, 1429, 1678, 2139, 2356, 2602
MfeI	CAATTG	2 cut(s)	1386, 2577
MflI	RGATCY	1 cut(s)	200
MhlI	GDGCHC	3 cut(s)	299, 460, 1702
MlsI	TGGCCA	1 cut(s)	2999
MluNI	TGGCCA	1 cut(s)	2999
MlyI	GAGTC	8 cut(s)	245, 887, 908, 1127, 1439, 1727, 2407, 2605
MmeI	TCCRAC	3 cut(s)	379, 1350, 2257
Mox20I	TGGCCA	1 cut(s)	2999
Mph1103I	ATGCAT	3 cut(s)	2308, 2329, 2447
MroXI	GAANNNNTTC	2 cut(s)	1647, 1776
MscI	TGGCCA	1 cut(s)	2999
MseI	TTAA	9 cut(s)	324, 605, 696, 1262, 1997, 2151, 2253, 2880, 3025
MslI	CAYNNNNRTG	2 cut(s)	1215, 1935
Msp20I	TGGCCA	1 cut(s)	2999
MspI	CCGG	4 cut(s)	51, 151, 1183, 2147
MspR9I	CCNGG	3 cut(s)	22, 35, 64
MssI	GTTTAAAC	1 cut(s)	1998
MunI	CAATTG	2 cut(s)	1386, 2577
Mva1269I	GAATGC	5 cut(s)	361, 418, 520, 962, 2118
MvaI	CCWGG	3 cut(s)	22, 35, 64
MvnI	CGCG	1 cut(s)	85
NdeI	CATATG	1 cut(s)	2413
NdeII	GATC	8 cut(s)	200, 373, 1024, 1429, 1678, 2139, 2356, 2602
NlaIV	GGNNCC	6 cut(s)	285, 1337, 1563, 1700, 1962, 2460
NmeAIII	GCCGAG	1 cut(s)	1982
NmuCI	GTSAC	4 cut(s)	777, 1486, 1688, 2179
NsbI	TGCGCA	1 cut(s)	2205
NsiI	ATGCAT	3 cut(s)	2308, 2329, 2447
NspI	RCATGY	4 cut(s)	1321, 1461, 1538, 2492
NspV	TTCGAA	2 cut(s)	1063, 2815
PaeI	GCATGC	1 cut(s)	1461
PagI	TCATGA	3 cut(s)	1441, 1936, 2599
PaqCI	CACCTGC	1 cut(s)	2062
PciSI	GCTCTTC	2 cut(s)	465, 1823
PctI	GAATGC	5 cut(s)	361, 418, 520, 962, 2118
PdmI	GAANNNNTTC	2 cut(s)	1647, 1776
PflFI	GACNNNGTC	1 cut(s)	2235
PkrI	GCNGC	7 cut(s)	382, 565, 1552, 1885, 2659, 2913, 2916
Ple19I	CGATCG	1 cut(s)	1681
PleI	GAGTC	8 cut(s)	245, 886, 907, 1126, 1439, 1726, 2406, 2604
PmeI	GTTTAAAC	1 cut(s)	1998
PpsI	GAGTC	8 cut(s)	245, 886, 907, 1126, 1439, 1726, 2406, 2604
Ppu21I	YACGTR	1 cut(s)	551
PsiI	TTATAA	1 cut(s)	1352
Psp124BI	GAGCTC	1 cut(s)	299
Psp1406I	AACGTT	2 cut(s)	865, 1861
Psp6I	CCWGG	3 cut(s)	20, 33, 62
PspGI	CCWGG	3 cut(s)	20, 33, 62
PspN4I	GGNNCC	6 cut(s)	285, 1337, 1563, 1700, 1962, 2460
PspOMI	GGGCCC	1 cut(s)	1698
PspPI	GGNCC	4 cut(s)	283, 1180, 1698, 1699
PstI	CTGCAG	1 cut(s)	177
PstNI	CAGNNNCTG	1 cut(s)	542
PsuI	RGATCY	1 cut(s)	200
PsyI	GACNNNGTC	1 cut(s)	2235
PvuI	CGATCG	1 cut(s)	1681
RseI	CAYNNNNRTG	2 cut(s)	1215, 1935
SacI	GAGCTC	1 cut(s)	299
SalI	GTCGAC	2 cut(s)	1009, 1734
SapI	GCTCTTC	2 cut(s)	465, 1823
SaqAI	TTAA	9 cut(s)	324, 605, 696, 1262, 1997, 2151, 2253, 2880, 3025
SatI	GCNGC	7 cut(s)	381, 564, 1551, 1884, 2658, 2912, 2915
Sau3AI	GATC	8 cut(s)	200, 373, 1024, 1429, 1678, 2139, 2356, 2602
Sau96I	GGNCC	4 cut(s)	283, 1180, 1698, 1699
ScaI	AGTACT	1 cut(s)	996
SchI	GAGTC	8 cut(s)	245, 887, 908, 1127, 1439, 1727, 2407, 2605
ScrFI	CCNGG	3 cut(s)	22, 35, 64
SduI	GDGCHC	3 cut(s)	299, 460, 1702
SexAI	ACCWGGT	1 cut(s)	20
SfaNI	GCATC	9 cut(s)	535, 603, 738, 1122, 1384, 2287, 2293, 2314, 2432
SfcI	CTRYAG	1 cut(s)	173
SfuI	TTCGAA	2 cut(s)	1063, 2815
SinI	GGWCC	2 cut(s)	283, 1180
SmiMI	CAYNNNNRTG	2 cut(s)	1215, 1935
SmlI	CTYRAG	3 cut(s)	292, 567, 1889
SmoI	CTYRAG	3 cut(s)	292, 567, 1889
SphI	GCATGC	1 cut(s)	1461
SsiI	CCGC	8 cut(s)	5, 83, 224, 416, 616, 647, 2215, 2911
SspI	AATATT	1 cut(s)	427
SspMI	CTAG	6 cut(s)	192, 1001, 1703, 2007, 2402, 2513
SstI	GAGCTC	1 cut(s)	299
StyD4I	CCNGG	3 cut(s)	20, 33, 62
StyI	CCWWGG	2 cut(s)	1322, 2041
TaaI	ACNGT	8 cut(s)	216, 1140, 1768, 1833, 2188, 2343, 2800, 2970
TaiI	ACGT	7 cut(s)	553, 844, 868, 1849, 1864, 2236, 2875
TaqI	TCGA	7 cut(s)	347, 1010, 1063, 1432, 1728, 1735, 2815
TaqII	GACCGA	1 cut(s)	262
TatI	WGTACW	6 cut(s)	164, 994, 2338, 2343, 2473, 2548
TauI	GCSGC	1 cut(s)	2914
Tru1I	TTAA	9 cut(s)	324, 605, 696, 1262, 1997, 2151, 2253, 2880, 3025
Tru9I	TTAA	9 cut(s)	324, 605, 696, 1262, 1997, 2151, 2253, 2880, 3025
TscAI	CASTG	3 cut(s)	1771, 2326, 2353
TseFI	GTSAC	4 cut(s)	777, 1486, 1688, 2179
TseI	GCWGC	6 cut(s)	380, 563, 1550, 1883, 2657, 2914
Tsp45I	GTSAC	4 cut(s)	777, 1486, 1688, 2179
TspGWI	ACGGA	3 cut(s)	848, 1450, 2983
TspRI	CASTG	3 cut(s)	1771, 2326, 2353
Tth111I	GACNNNGTC	1 cut(s)	2235
VpaK11BI	GGWCC	2 cut(s)	283, 1180
XapI	RAATTY	5 cut(s)	628, 1247, 1328, 2280, 2567
XceI	RCATGY	4 cut(s)	1321, 1461, 1538, 2492
XmiI	GTMKAC	2 cut(s)	1010, 1735
XmnI	GAANNNNTTC	2 cut(s)	1647, 1776
XspI	CTAG	6 cut(s)	192, 1001, 1703, 2007, 2402, 2513
ZrmI	AGTACT	1 cut(s)	996
Zsp2I	ATGCAT	3 cut(s)	2308, 2329, 2447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.