Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0005866

Physical Location & Seq

Genomic Coordinates Reverse (-)

42177632 .. 42182190

Gene Structure 4559 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1289600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGGCGGTCAGGCTAACGACCTGGTTCGTAACTCAGGGGCTCACCATTAGCGGCTCCAACTCCACCTCCAGGCACTGCTCAAATTCGAGCTCCCGCTTTTCATTTCACTGCACTCCCGCTTCATCCTGCAAGCTCCGGCACCGCAATCTCAGTTGCTATTGCGTGAATAAGAGGCAGAGACTGAAGAAGAAAGACTCGGTCGAACAGTCTTCGACGACTGCAGATTTCCAGCTCAATGGCGACGACGACTCCGAATCTGAAAATGCTTCTTCGGCGGGCGTAGTCGTCCCCATTGAAAGCGTATCTGATGACGAAGCTCGCACTGCCAATGGAGACGATTCGATTTCGACGGCTCTGACTCCGTCTGATGAAGCAAATCCTTCGGCGTATAGTACACAGGATTTGGTTGACATGATTAGAAATGCAGAGAAAAATATCCATATTCTCAACCAAGCGCGGGTTAATGCGCTTGAAGACCTTGACAAGATTCTTGGCGAGAAGGAGGCATTGCAAGGAGAGATGAATGCATTGGAAATGAGATTGGCAGAGACCGATGCACGGATTAGAGTAGCTGCCCAGGAAAAAATAAAGGTGGAACTTCTAGAAAACCAATTAGATGAGATGCGGAATGATCTGAATCTTAATAGTGGTGGTGGTGTCGAAAGAGGTCAGGTGGAGATTTTTGAGAATGAAAACGAGCTGTTTAATGAAGAAGCTCCTGTACCATACAGAACTAGTATCAATGCTCTTGTTACCAATCTGAATGCATTGAGATTAGAAAATCAATCCCTCAGGAGTGACGTAGAAGCACTTAGGGAGGAGCTTAGCTATGTGAAGAATACGGATGAACGAGTGGTAATGCTGGAAAAACAACGGTCGACTTTAGAGTCTGCCTTGAAAGAGTTGGAATTGAAATTGTCAGTTTCTCAGGAAGATGTTTCCAAACTATCCAATCTTAAAGTCGAATGCAAAGGATTATGGGAGAAGGTGGAGAGTTTGCAGCTACTGCTAGATAAGTCAACCAAACAGGCAGATCAAGCTATTACCGTGTTACAGCAGAACCAAGAGATTCGAAAGAAAGTTGATAAATTAGAAGAATCTCTTGAAACAGCTAATATCTATAAAGAATCATCAGAAAAGATGCAACAATATAATGAGCTAATGCAGCAGAAGATAAAACTTATGGAGGACCGGCTTCAAAGATCTGACGAAGAGATACATTCCTATGTTCAATTATATCAAGAATCTGTGGAGGAATTTCAAGATACACTAAATACTCTAAAAGAAGAAAGCAAGAGAAGGGCAGTTGATGAACCTGTGGATGATATGCCGTGGGAATTTTGGAGTCGTTTATTGCTTATGATCGATGGTTGGTTGTTTGAGAAAAAAATATCAATGGATGATGCCAAGGTGTTGAGAGAAATGGTCTGGAAGAGAGATCGACGACTTCGTGACTCATACATGGCATGCAAGGAAAAGAACGTGAATGAGGCTGTGTCTACATTTCTCAAACTGATATCATCACAAACAAGTCCAGGATTGCATGTCGTTCATATTGCAGCAGAGATGGCACCAGTTGCTAAGGTTGGTGGTTTGGGGGATGTTGTGGCTGGTCTTGGTAAAGCACTGCAGAAGAAGGGACACCTTGTGGAAATTATACTTCCCAAATATGACTGCATGCAGTACGATCGTGTTCCTGACCTAATGGCCCTAGATGTGGTGCTGGAGTCATACTTTGATGGTCGACTATTCAAAAATAAAGTGTGGGTTGGCACTGTTGAAGGTCTTCCAGTTTATTTTATTGAGCCTCTACATCCTGATAAGTTCTTCTGGAGAGGACAATTTTATGGGGAACGTGATGATTTCAAGCGATTTTCCTTTTTCAGTCGTGCAGCCCTTGAGTTGCTTCTTCAATCTGGCAAGAAACCAGACATAATTCATTGCCATGATTGGCAGACAGCTTTTGTTGCACCACTTTACTGGGATCTATATGCTCCAAAGGGATTAAACTCAGGTAGAATATGTTTTACATGCCACAACTTTGAATACCAAGGGACTGCGCGTGCTTCAGAATTGGCATCTTGTGGTCTTGATGTCCACCAGCTAAATCGACCAGATAGAATGCAGGACAACTCAGCACATGATAGGATCAATGCTGTTAAGGGTGCAGTTGTATTCTCCAATATTGTGACAACTGTATCGCCCACCTATGCGCAAGAGGTGCGGACTGCTGAGGGAGGACATGGTCTCCATTCAACACTAAACTTCCATTCTAAGAAGTTCGTTGGAATTCTAAATGGTATTGACGCTGATGCGTGGAATCCTGCCACTGATGCATATCTCAAAGTACAGTACAGTGCTAATGATCGTCAGGGTAAAGCAGAAAATAAGGAAGCATTAAGAAGAATTCTGCGGCTTTCTTCGGCAGATGTCAAGAGGCCATTGGTAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009507 GO:0009536 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019252 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 map00500 map01100 map01110 map02026

Pfam Domains

Protein Families

Glyco_transf_5 Glycos_transf_1

Protein Analysis

818

Amino Acids

92.63

Weight (kDa)

5.44

Isoelectric Point (pI)

46.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	515 - 755	4.1e-65	Starch synthase catalytic domain
Glyco_transf_4	PF13439	529 - 743	3e-08	Glycosyltransferase Family 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18240
fragaria_vesca	FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130
malus_domestica	MD05G1289600.v1.1 MD10G1265500.v1.1
prunus_persica	Prupe.4G076100_v2.0.a1
pyrus_communis	pycom05g26670 pycom10g22140
rosa_chinensis	RchiOBHm_Chr5g0013241
rosa_laevigata	RLG00000032000
rosa_multiflora	Rmu_co8500739.1_g000001 Rmu_sc0004521.1_g000017
rosa_roxburghii	Rroxscaffold_1G00063270
rosa_rugosa	Rorug05G0008200.1 Rorug05G0008300.1 Rorug05G0008400
rosa_samantha	Rh5AG103000 Rh5BG099800 Rh5CG111200 Rh5DG098600
rosa_wichuraiana	Rw5G008990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	886
Acc16I	TGCGCA	1 cut(s)	2214
AccB1I	GGYRCC	2 cut(s)	138, 1570
AccI	GTMKAC	3 cut(s)	878, 1499, 1744
AccII	CGCG	2 cut(s)	457, 2062
AclWI	GGATC	2 cut(s)	1992, 2156
AcsI	RAATTY	5 cut(s)	82, 1256, 1337, 2289, 2406
AcuI	CTGAAG	2 cut(s)	203, 2052
AdeI	CACNNNGTG	1 cut(s)	1648
AfaI	GTAC	5 cut(s)	394, 723, 1685, 2349, 2354
AfiI	CCNNNNNNNGG	4 cut(s)	69, 457, 558, 1717
AhlI	ACTAGT	1 cut(s)	734
AjnI	CCWGG	4 cut(s)	20, 68, 576, 1534
Alw21I	GWGCWC	1 cut(s)	92
Alw26I	GTCTC	4 cut(s)	172, 327, 542, 2252
AlwI	GGATC	2 cut(s)	1992, 2156
AlwNI	CAGNNNCTG	3 cut(s)	75, 181, 1006
AoxI	GGCC	2 cut(s)	1707, 2438
ApeKI	GCWGC	5 cut(s)	572, 1000, 1165, 1559, 1892
ApoI	RAATTY	5 cut(s)	82, 1256, 1337, 2289, 2406
Asp700I	GAANNNNTTC	1 cut(s)	1785
AspLEI	GCGC	4 cut(s)	457, 469, 2062, 2215
AspS9I	GGNCC	2 cut(s)	1189, 1708
AsuHPI	GGTGA	1 cut(s)	34
AsuII	TTCGAA	1 cut(s)	1072
AvaII	GGWCC	1 cut(s)	1189
AxyI	CCTNAGG	1 cut(s)	791
BaeI	ACNNNNGTAYC	2 cut(s)	2181, 2214
BanI	GGYRCC	2 cut(s)	138, 1570
BanII	GRGCYC	2 cut(s)	42, 92
BarI	GAAGNNNNNNTAC	2 cut(s)	705, 737
BbsI	GAAGAC	3 cut(s)	201, 480, 1778
Bbv12I	GWGCWC	1 cut(s)	92
BbvCI	CCTCAGC	1 cut(s)	2232
BbvI	GCAGC	5 cut(s)	559, 1012, 1177, 1571, 1904
BccI	CCATC	3 cut(s)	1361, 1561, 1733
BceAI	ACGGC	2 cut(s)	366, 1315
BcgI	CGANNNNNNTGC	4 cut(s)	363, 397, 1670, 1704
BciT130I	CCWGG	4 cut(s)	22, 70, 578, 1536
BcoDI	GTCTC	4 cut(s)	172, 327, 542, 2252
BcuI	ACTAGT	1 cut(s)	734
BfaI	CTAG	4 cut(s)	602, 735, 1010, 1712
BfmI	CTRYAG	2 cut(s)	219, 1628
BglII	AGATCT	1 cut(s)	1202
BisI	GCNGC	7 cut(s)	52, 573, 1001, 1166, 1560, 1893, 2414
BlpI	GCTNAGC	1 cut(s)	824
BlsI	GCNGC	7 cut(s)	53, 574, 1002, 1167, 1561, 1894, 2415
Bme1390I	CCNGG	4 cut(s)	22, 70, 578, 1536
Bme18I	GGWCC	1 cut(s)	1189
BmgT120I	GGNCC	2 cut(s)	1189, 1708
BmiI	GGNNCC	3 cut(s)	55, 140, 1572
BmrFI	CCNGG	4 cut(s)	22, 70, 578, 1536
BmrI	ACTGGG	1 cut(s)	1990
BmsI	GCATC	7 cut(s)	544, 612, 1131, 1393, 2087, 2302, 2323
BmuI	ACTGGG	1 cut(s)	1990
BpiI	GAAGAC	3 cut(s)	201, 480, 1778
BpmI	CTGGAG	3 cut(s)	52, 1745, 1852
Bpu10I	CCTNAGC	2 cut(s)	1581, 2232
Bpu1102I	GCTNAGC	1 cut(s)	824
Bpu14I	TTCGAA	1 cut(s)	1072
BpuEI	CTTGAG	1 cut(s)	1919
Bsa29I	ATCGAT	1 cut(s)	1365
BsaBI	GATNNNNATC	2 cut(s)	636, 2337
BsaI	GGTCTC	2 cut(s)	542, 2252
BsaJI	CCNNGG	4 cut(s)	576, 1331, 1407, 2050
BsaXI	ACNNNNNCTCC	6 cut(s)	50, 80, 233, 263, 2232, 2262
Bsc4I	CCNNNNNNNGG	4 cut(s)	69, 457, 558, 1717
Bse118I	RCCGGY	1 cut(s)	1191
Bse1I	ACTGG	3 cut(s)	1574, 1790, 1985
Bse21I	CCTNAGG	1 cut(s)	791
Bse3DI	GCAATG	2 cut(s)	506, 1939
Bse8I	GATNNNNATC	2 cut(s)	636, 2337
BseBI	CCWGG	4 cut(s)	22, 70, 578, 1536
BseCI	ATCGAT	1 cut(s)	1365
BseDI	CCNNGG	4 cut(s)	576, 1331, 1407, 2050
BseGI	GGATG	6 cut(s)	122, 850, 1327, 1405, 1606, 1813
BseJI	GATNNNNATC	2 cut(s)	636, 2337
BseLI	CCNNNNNNNGG	4 cut(s)	69, 457, 558, 1717
BseMI	GCAATG	2 cut(s)	506, 1939
BseMII	CTCAG	7 cut(s)	47, 163, 805, 941, 2025, 2148, 2223
BseNI	ACTGG	3 cut(s)	1574, 1790, 1985
BseRI	GAGGAG	1 cut(s)	833
BseXI	GCAGC	5 cut(s)	559, 1012, 1177, 1571, 1904
BsgI	GTGCAG	3 cut(s)	94, 1911, 2187
Bsh1236I	CGCG	2 cut(s)	457, 2062
Bsh1285I	CGRYCG	3 cut(s)	201, 878, 1690
BshFI	GGCC	2 cut(s)	1709, 2440
BshNI	GGYRCC	2 cut(s)	138, 1570
BshVI	ATCGAT	1 cut(s)	1365
BsiEI	CGRYCG	3 cut(s)	201, 878, 1690
BsiHKAI	GWGCWC	1 cut(s)	92
BsiSI	CCGG	2 cut(s)	136, 1192
BslFI	GGGAC	3 cut(s)	272, 1653, 2068
BslI	CCNNNNNNNGG	4 cut(s)	69, 457, 558, 1717
BsmAI	GTCTC	4 cut(s)	172, 327, 542, 2252
BsmBI	CGTCTC	1 cut(s)	327
BsmFI	GGGAC	3 cut(s)	272, 1653, 2068
BsmI	GAATGC	4 cut(s)	529, 769, 971, 2127
BsnI	GGCC	2 cut(s)	1709, 2440
Bso31I	GGTCTC	2 cut(s)	542, 2252
Bsp119I	TTCGAA	1 cut(s)	1072
Bsp1286I	GDGCHC	2 cut(s)	42, 92
Bsp143I	GATC	9 cut(s)	631, 1033, 1202, 1362, 1438, 1687, 1984, 2148, 2365
Bsp1720I	GCTNAGC	1 cut(s)	824
BspANI	GGCC	2 cut(s)	1709, 2440
BspCNI	CTCAG	7 cut(s)	46, 162, 804, 940, 2024, 2147, 2224
BspDI	ATCGAT	1 cut(s)	1365
BspFNI	CGCG	2 cut(s)	457, 2062
BspLI	GGNNCC	3 cut(s)	55, 140, 1572
BspMAI	CTGCAG	2 cut(s)	223, 1632
BspPI	GGATC	2 cut(s)	1992, 2156
BspT104I	TTCGAA	1 cut(s)	1072
BspT107I	GGYRCC	2 cut(s)	138, 1570
BspTNI	GGTCTC	2 cut(s)	542, 2252
BsrDI	GCAATG	2 cut(s)	506, 1939
BsrFI	RCCGGY	1 cut(s)	1191
BsrI	ACTGG	3 cut(s)	1574, 1790, 1985
BssAI	RCCGGY	1 cut(s)	1191
BssECI	CCNNGG	4 cut(s)	576, 1331, 1407, 2050
BssMI	GATC	9 cut(s)	631, 1033, 1202, 1362, 1438, 1687, 1984, 2148, 2365
BssT1I	CCWWGG	2 cut(s)	1407, 2050
Bst2UI	CCWGG	4 cut(s)	22, 70, 578, 1536
Bst4CI	ACNGT	7 cut(s)	207, 876, 1048, 1777, 2197, 2352, 2357
Bst6I	CTCTTC	2 cut(s)	1206, 1427
BstAPI	GCANNNNNTGC	3 cut(s)	1006, 1577, 2221
BstBI	TTCGAA	1 cut(s)	1072
BstC8I	GCNNGC	6 cut(s)	131, 277, 319, 1468, 1679, 2064
BstDSI	CCRYGG	1 cut(s)	1331
BstF5I	GGATG	6 cut(s)	122, 850, 1327, 1405, 1606, 1813
BstFNI	CGCG	2 cut(s)	457, 2062
BstHHI	GCGC	4 cut(s)	457, 469, 2062, 2215
BstKTI	GATC	9 cut(s)	634, 1036, 1205, 1365, 1441, 1690, 1987, 2151, 2368
BstMAI	GTCTC	4 cut(s)	172, 327, 542, 2252
BstMBI	GATC	9 cut(s)	631, 1033, 1202, 1362, 1438, 1687, 1984, 2148, 2365
BstMCI	CGRYCG	3 cut(s)	201, 878, 1690
BstNI	CCWGG	4 cut(s)	22, 70, 578, 1536
BstNSI	RCATGY	4 cut(s)	1470, 1547, 1681, 2034
BstSCI	CCNGG	4 cut(s)	20, 68, 576, 1534
BstSFI	CTRYAG	2 cut(s)	219, 1628
BstUI	CGCG	2 cut(s)	457, 2062
BstV1I	GCAGC	5 cut(s)	559, 1012, 1177, 1571, 1904
BstV2I	GAAGAC	3 cut(s)	201, 480, 1778
BstX2I	RGATCY	2 cut(s)	1202, 1984
BstXI	CCANNNNNNTGG	2 cut(s)	236, 1980
BstYI	RGATCY	2 cut(s)	1202, 1984
Bsu15I	ATCGAT	1 cut(s)	1365
Bsu36I	CCTNAGG	1 cut(s)	791
BsuRI	GGCC	2 cut(s)	1709, 2440
BsuTUI	ATCGAT	1 cut(s)	1365
BtgI	CCRYGG	1 cut(s)	1331
BtsCI	GGATG	6 cut(s)	122, 850, 1327, 1405, 1606, 1813
BtsI	GCAGTG	4 cut(s)	73, 106, 321, 1625
BtsIMutI	CAGTG	7 cut(s)	73, 106, 321, 1625, 1773, 2328, 2362
Cac8I	GCNNGC	6 cut(s)	131, 277, 319, 1468, 1679, 2064
CaiI	CAGNNNCTG	3 cut(s)	75, 181, 1006
CfoI	GCGC	4 cut(s)	457, 469, 2062, 2215
Cfr10I	RCCGGY	1 cut(s)	1191
Cfr13I	GGNCC	2 cut(s)	1189, 1708
ClaI	ATCGAT	1 cut(s)	1365
CseI	GACGC	1 cut(s)	2315
CsiI	ACCWGGT	1 cut(s)	20
Csp6I	GTAC	5 cut(s)	393, 722, 1684, 2348, 2353
CviAII	CATG	9 cut(s)	412, 1462, 1467, 1544, 1678, 1946, 2031, 2141, 2243
CviQI	GTAC	5 cut(s)	393, 722, 1684, 2348, 2353
DpnI	GATC	9 cut(s)	633, 1035, 1204, 1364, 1440, 1689, 1986, 2150, 2367
DpnII	GATC	9 cut(s)	631, 1033, 1202, 1362, 1438, 1687, 1984, 2148, 2365
DraIII	CACNNNGTG	1 cut(s)	1648
DrdI	GACNNNNNNGTC	1 cut(s)	886
DseDI	GACNNNNNNGTC	1 cut(s)	886
Eam1104I	CTCTTC	2 cut(s)	1206, 1427
EarI	CTCTTC	2 cut(s)	1206, 1427
Ecl136II	GAGCTC	1 cut(s)	90
Eco130I	CCWWGG	2 cut(s)	1407, 2050
Eco24I	GRGCYC	2 cut(s)	42, 92
Eco31I	GGTCTC	2 cut(s)	542, 2252
Eco32I	GATATC	1 cut(s)	1518
Eco47I	GGWCC	1 cut(s)	1189
Eco53kI	GAGCTC	1 cut(s)	90
Eco57I	CTGAAG	2 cut(s)	203, 2052
Eco81I	CCTNAGG	1 cut(s)	791
EcoICRI	GAGCTC	1 cut(s)	90
EcoRI	GAATTC	2 cut(s)	2289, 2406
EcoRII	CCWGG	4 cut(s)	20, 68, 576, 1534
EcoRV	GATATC	1 cut(s)	1518
EcoT14I	CCWWGG	2 cut(s)	1407, 2050
EcoT22I	ATGCAT	3 cut(s)	529, 769, 2338
EcoT38I	GRGCYC	2 cut(s)	42, 92
ErhI	CCWWGG	2 cut(s)	1407, 2050
Esp3I	CGTCTC	1 cut(s)	327
FaeI	CATG	9 cut(s)	415, 1465, 1470, 1547, 1681, 1949, 2034, 2144, 2246
FalI	AAGNNNNNCTT	2 cut(s)	1086, 1118
FaqI	GGGAC	3 cut(s)	272, 1653, 2068
FatI	CATG	9 cut(s)	411, 1461, 1466, 1543, 1677, 1945, 2030, 2140, 2242
FauI	CCCGC	4 cut(s)	101, 124, 268, 450
FblI	GTMKAC	3 cut(s)	878, 1499, 1744
Fnu4HI	GCNGC	7 cut(s)	52, 573, 1001, 1166, 1560, 1893, 2414
FokI	GGATG	6 cut(s)	109, 857, 1334, 1412, 1613, 1800
FriOI	GRGCYC	2 cut(s)	42, 92
Fsp4HI	GCNGC	7 cut(s)	52, 573, 1001, 1166, 1560, 1893, 2414
FspBI	CTAG	4 cut(s)	602, 735, 1010, 1712
FspI	TGCGCA	1 cut(s)	2214
GlaI	GCGC	4 cut(s)	456, 468, 2061, 2214
GluI	GCNGC	7 cut(s)	52, 573, 1001, 1166, 1560, 1893, 2414
GsuI	CTGGAG	3 cut(s)	52, 1745, 1852
HaeIII	GGCC	2 cut(s)	1709, 2440
HapII	CCGG	2 cut(s)	136, 1192
HgaI	GACGC	1 cut(s)	2315
HhaI	GCGC	4 cut(s)	457, 469, 2062, 2215
Hin1II	CATG	9 cut(s)	415, 1465, 1470, 1547, 1681, 1949, 2034, 2144, 2246
Hin6I	GCGC	4 cut(s)	455, 467, 2060, 2213
HinP1I	GCGC	4 cut(s)	455, 467, 2060, 2213
HincII	GTYRAC	4 cut(s)	409, 879, 1020, 1745
HindII	GTYRAC	4 cut(s)	409, 879, 1020, 1745
HpaII	CCGG	2 cut(s)	136, 1192
HphI	GGTGA	1 cut(s)	34
Hpy166II	GTNNAC	7 cut(s)	395, 409, 879, 1020, 1500, 1745, 2098
Hpy8I	GTNNAC	7 cut(s)	395, 409, 879, 1020, 1500, 1745, 2098
Hpy99I	CGWCG	5 cut(s)	217, 245, 248, 352, 1446
HpyAV	CCTTC	6 cut(s)	390, 493, 979, 1293, 1630, 1775
HpyCH4III	ACNGT	7 cut(s)	207, 876, 1048, 1777, 2197, 2352, 2357
HpyCH4IV	ACGT	3 cut(s)	801, 1482, 1855
HpySE526I	ACGT	3 cut(s)	801, 1482, 1855
Hsp92II	CATG	9 cut(s)	415, 1465, 1470, 1547, 1681, 1949, 2034, 2144, 2246
HspAI	GCGC	4 cut(s)	455, 467, 2060, 2213
Kzo9I	GATC	9 cut(s)	631, 1033, 1202, 1362, 1438, 1687, 1984, 2148, 2365
LmnI	GCTCC	6 cut(s)	59, 95, 138, 721, 820, 1999
Lsp1109I	GCAGC	5 cut(s)	559, 1012, 1177, 1571, 1904
LweI	GCATC	7 cut(s)	544, 612, 1131, 1393, 2087, 2302, 2323
MabI	ACCWGGT	1 cut(s)	20
MaeI	CTAG	4 cut(s)	602, 735, 1010, 1712
MaeII	ACGT	3 cut(s)	801, 1482, 1855
MaeIII	GTNAC	6 cut(s)	28, 751, 797, 1050, 1451, 2188
MalI	GATC	9 cut(s)	633, 1035, 1204, 1364, 1440, 1689, 1986, 2150, 2367
MboI	GATC	9 cut(s)	631, 1033, 1202, 1362, 1438, 1687, 1984, 2148, 2365
MflI	RGATCY	2 cut(s)	1202, 1984
MhlI	GDGCHC	2 cut(s)	42, 92
MlyI	GAGTC	7 cut(s)	188, 242, 352, 896, 1354, 1448, 1736
MmeI	TCCRAC	3 cut(s)	81, 885, 2266
Mph1103I	ATGCAT	3 cut(s)	529, 769, 2338
MroXI	GAANNNNTTC	1 cut(s)	1785
MseI	TTAA	7 cut(s)	462, 642, 705, 957, 2006, 2160, 2399
MslI	CAYNNNNRTG	2 cut(s)	1224, 1944
MspI	CCGG	2 cut(s)	136, 1192
MspR9I	CCNGG	4 cut(s)	22, 70, 578, 1536
Mva1269I	GAATGC	4 cut(s)	529, 769, 971, 2127
MvaI	CCWGG	4 cut(s)	22, 70, 578, 1536
MvnI	CGCG	2 cut(s)	457, 2062
NdeII	GATC	9 cut(s)	631, 1033, 1202, 1362, 1438, 1687, 1984, 2148, 2365
NlaIII	CATG	9 cut(s)	415, 1465, 1470, 1547, 1681, 1949, 2034, 2144, 2246
NlaIV	GGNNCC	3 cut(s)	55, 140, 1572
NmuCI	GTSAC	3 cut(s)	797, 1451, 2188
NsbI	TGCGCA	1 cut(s)	2214
NsiI	ATGCAT	3 cut(s)	529, 769, 2338
NspI	RCATGY	4 cut(s)	1470, 1547, 1681, 2034
NspV	TTCGAA	1 cut(s)	1072
PaeI	GCATGC	2 cut(s)	1470, 1681
PcsI	WCGNNNNNNNCGW	2 cut(s)	249, 1447
PctI	GAATGC	4 cut(s)	529, 769, 971, 2127
PdmI	GAANNNNTTC	1 cut(s)	1785
PfeI	GAWTC	9 cut(s)	254, 338, 487, 637, 1069, 1097, 1127, 1244, 2320
PflFI	GACNNNGTC	3 cut(s)	197, 361, 2244
PfoI	TCCNGGA	1 cut(s)	1534
PkrI	GCNGC	7 cut(s)	53, 574, 1002, 1167, 1561, 1894, 2415
Ple19I	CGATCG	1 cut(s)	1690
PleI	GAGTC	7 cut(s)	188, 242, 352, 895, 1353, 1448, 1735
PpsI	GAGTC	7 cut(s)	188, 242, 352, 895, 1353, 1448, 1735
Psp124BI	GAGCTC	1 cut(s)	92
Psp6I	CCWGG	4 cut(s)	20, 68, 576, 1534
PspGI	CCWGG	4 cut(s)	20, 68, 576, 1534
PspN4I	GGNNCC	3 cut(s)	55, 140, 1572
PspPI	GGNCC	2 cut(s)	1189, 1708
PstI	CTGCAG	2 cut(s)	223, 1632
PstNI	CAGNNNCTG	3 cut(s)	75, 181, 1006
PsuI	RGATCY	2 cut(s)	1202, 1984
PsyI	GACNNNGTC	3 cut(s)	197, 361, 2244
PvuI	CGATCG	1 cut(s)	1690
RsaI	GTAC	5 cut(s)	394, 723, 1685, 2349, 2354
RsaNI	GTAC	5 cut(s)	393, 722, 1684, 2348, 2353
RseI	CAYNNNNRTG	2 cut(s)	1224, 1944
SacI	GAGCTC	1 cut(s)	92
SalI	GTCGAC	2 cut(s)	877, 1743
SaqAI	TTAA	7 cut(s)	462, 642, 705, 957, 2006, 2160, 2399
SatI	GCNGC	7 cut(s)	52, 573, 1001, 1166, 1560, 1893, 2414
Sau3AI	GATC	9 cut(s)	631, 1033, 1202, 1362, 1438, 1687, 1984, 2148, 2365
Sau96I	GGNCC	2 cut(s)	1189, 1708
SchI	GAGTC	7 cut(s)	188, 242, 352, 896, 1354, 1448, 1736
ScrFI	CCNGG	4 cut(s)	22, 70, 578, 1536
SduI	GDGCHC	2 cut(s)	42, 92
SexAI	ACCWGGT	1 cut(s)	20
SfaNI	GCATC	7 cut(s)	544, 612, 1131, 1393, 2087, 2302, 2323
SfcI	CTRYAG	2 cut(s)	219, 1628
SfuI	TTCGAA	1 cut(s)	1072
SinI	GGWCC	1 cut(s)	1189
SmiMI	CAYNNNNRTG	2 cut(s)	1224, 1944
SmlI	CTYRAG	1 cut(s)	1898
SmoI	CTYRAG	1 cut(s)	1898
SpeI	ACTAGT	1 cut(s)	734
SphI	GCATGC	2 cut(s)	1470, 1681
SspI	AATATT	1 cut(s)	2185
SspMI	CTAG	4 cut(s)	602, 735, 1010, 1712
SstI	GAGCTC	1 cut(s)	92
StyD4I	CCNGG	4 cut(s)	20, 68, 576, 1534
StyI	CCWWGG	2 cut(s)	1407, 2050
TaaI	ACNGT	7 cut(s)	207, 876, 1048, 1777, 2197, 2352, 2357
TaiI	ACGT	3 cut(s)	804, 1485, 1858
TaqII	GACCGA	2 cut(s)	187, 566
TatI	WGTACW	3 cut(s)	392, 2347, 2352
TauI	GCSGC	2 cut(s)	54, 2416
TfiI	GAWTC	9 cut(s)	254, 338, 487, 637, 1069, 1097, 1127, 1244, 2320
Tru1I	TTAA	7 cut(s)	462, 642, 705, 957, 2006, 2160, 2399
Tru9I	TTAA	7 cut(s)	462, 642, 705, 957, 2006, 2160, 2399
TscAI	CASTG	7 cut(s)	80, 113, 328, 1632, 1780, 2335, 2362
TseFI	GTSAC	3 cut(s)	797, 1451, 2188
TseI	GCWGC	5 cut(s)	572, 1000, 1165, 1559, 1892
Tsp45I	GTSAC	3 cut(s)	797, 1451, 2188
TspGWI	ACGGA	3 cut(s)	351, 574, 857
TspRI	CASTG	7 cut(s)	80, 113, 328, 1632, 1780, 2335, 2362
Tth111I	GACNNNGTC	3 cut(s)	197, 361, 2244
VpaK11BI	GGWCC	1 cut(s)	1189
XapI	RAATTY	5 cut(s)	82, 1256, 1337, 2289, 2406
XbaI	TCTAGA	1 cut(s)	601
XceI	RCATGY	4 cut(s)	1470, 1547, 1681, 2034
XmiI	GTMKAC	3 cut(s)	878, 1499, 1744
XmnI	GAANNNNTTC	1 cut(s)	1785
XspI	CTAG	4 cut(s)	602, 735, 1010, 1712
Zsp2I	ATGCAT	3 cut(s)	529, 769, 2338

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.