Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0005866

Physical Location & Seq

Genomic Coordinates Reverse (-)

85183299 .. 85190362

Gene Structure 7064 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00063270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3003 bp

ATGGCGGTGAGGCTCACGACCTGGTTTGTGAGCCAGGGGATTAGCATTTCCGGTTCAAACTCCAGGCGCTCACATTCAAATTCGCGCTTCTCATTTGCTTCTTCCTCTCCTGCTTCTTCTTCTTCTTCTTCGTCCTGTAAGCTACGCCACCGGAATCTCAGTTGTACTTGCCTGCAGAAGAGGCAAAGAGCTAGGAAGAGATCCTCTCGGGAACAATCTTCTGCGGATTTCCTGCCAAGTGGCGAAGAGGACTCTGAATCTGAGACTGCTTCGGTCGGCATGGTCCCTCTCTTGAACTCAGAAATCGTATCTGATGATGATGTTAATACTATCAATTCAAACGATTCGATTTCGAATGCTCTTACTACATCTGATCAAGCAGCACCTTCGGATTTGGTTGGAATGATAAGGAATGCGGAGAAAAATATTCTTCTCTTGAATCAAGCTCGGGTTAGTGCTCTTCAAGACCTTGACAAGATTCTATCTGAAAAGGAAGAGCTGCAAGGAGAAATGAATGCTTTGGAAATGAGATTGGCAGAGACTGATGCACGTATCAGAGTCGCTGCTCAAGAGAAAGTAAGGATGGAACTCCTCGGAGACCACTTAAACCAGATGCGGAATGAACAGAATTTCAATGGTGATGGTGCGGAAACAAGCAATGGGGTTGAGATTTTTGAGAGTGAAAGTGAGCTATTTAATGAAGAAGCTCCTTTGCCATACAAAAGCAGCATCAATTCGCTTGTAGCAAATCTTAGTTCATTGAGATTAGAAAATGTGTCACTTAGGAATGATATACAGGAACTCAGAGAGGAGCTTAGTAATATGAAAAATACGGATGAACGTGTGGTCATGCTTGAAAAACAACGTTCGTCATTGGAGTCTGCCCTAAAAGATTTGGAGTCCAAATTGGTAGTTTCTCAGGACGATGTTTCCAAACTTTCCAATCTGAAGGTTGAATGCAAAGGTTTATGGGAAAAGGTGGAGAATTTGCAAGTACTGCTAGATAAGTCGACCAAGCAGGCAGATCAAGCTATTATAGTGTTACAGCAAAATCAGGAGATTCGAAAAAAGGTTGATAAATTAGAAGAATCTCTTGAAAAAGCTAATGTGTACAAGGAGTCATCAGAAAAGATGCAACAGTATAATGAGCTTATGCAACAAAAGATAAAACTAATGGAGGACCGGCTTCAGCGTTCGGACGAAGAGATACATTCTTATGTTCAGTTATATCAAGAATCTGTGGAGGAATTTCAAGATACCTTAAATACTCTAAAAGAAGAAAGCAAGAGAAGGGTGATGGATGAACCTGTTGATGACATGCCTTGGGAATTTTGGAGCCGTTTATTGCTTATAATTGATGGTTGGTTGTTGGAAAAGAAAATATCAATTGATGATGCAAAGGCATTGAGAGAAATGGTATGGAAAAGAGATCGACGGATTCATGACTCATACATGGCATGCAAGGAAAAGAATGTAAATGAGGCTGTGACTACATTTCTCAGACTGATATCATCACAAACAAGGGTGGATGGTCTATCATTTGTGAAAGAGGTTGGTGGTTTGGGTGATGTTGTAGCTGGTCTTTGTAAAGCATTGCAGAAGAAGGGACACCTTGTGGAAATTATTCTTCCCAAATATGATTGCATGGAGTACGATCGTGTTCGTGACCTAAGGGCCCTAGATGTGGCGGTAGAGTCGTACTTCGATGGTCGACTATTCAAGAATAAAATCTGGGTTGGCACTGTTGAAGGTCTTCCTGTATATTTTATTGAGCCTCTTCATCCTGATAAGCTCTTCTGGAGAGGACAGTTTTATGGAGAACGTGATGATTTCAAACGTTTTTCCTTCTTCAGTCGTGCAGCGCTTGAGTTACTTCTTCAAGCTGGCAAGAAACCTGACATAATTCATTGTCATGATTGGCAGACAGCTTTCGTGGCTCCACTCTATTGGGACTTGTATGCCCCAAAGGGATTAAACTCGGCTAGGATATGTTTTACCTGCCACAACTTTGAATACCAAGGGACTGCACCTGCTTCAGACTTGGCGTCTTGTGGTCTTGACGTTGGCCAGCTAAACAGACCAGATAGAATGCAGGACAACTTAGCACATGATAGGATCAATCCGGTTAAGGGTGCAGTTGTATTCTCTAATATCGTGACAACGGTGTCACCTACCTATGCACAAGAGGTGCGCAGTGCTGAGGGTGGACGTGGTCTCCATTCAACACTTAATTTTCATTCTAAAAAGTTCGTTGGAATTCTCAATGGAATTGATGCTGATGCATGGAATCCTGCCACTGATGCATATCTCAAAGTACAGTACACTGCCAATGATCTAGGGGGGAAAGCAGAAAATAAGGAAGCTATTAGAAAGAGTCTAGGGCTTTCGTATGCCGATGTCAGGAGACCATTGGTGGGATGCATAACGAGATTGGTGCCACAGAAAGGTGTACATCTCATCAGACATGCGATTTATAGAACATTGGAGCTAGGAGGGCAGTTTGTTCTTTTGGGTTCAAGTCCAGTACATCATATTCAGAAGGAATTTGAGGCAATTGCAAACCATTTTCAGAGTCATGATCATATTAGGTTGATATTGAAGTATGATGAAACTCTTTCCCATTCCATTTATGCTGCTTCTGATATGTTCATCGTTCCATCAATCTTTGAGCCTTGTGGACTTACACAGATGATAGCAATGAGATATGGTTCTATACCCATCGCAAGAAAAACTGGTGGTCTAAATGATAGTGTCTTTGATGTTGATGATGACACCGTACCTCTTCAGTTTCGAAATGGATATTCATTTTTGTCTCCTGATGAACAGGGACTAAACGGTGCTTTGGAACGTGCATTTAACCACTACCTAAGGAAGCCTGAGAGTTGGCGGCAGCTTGTTCAGAAGGATATGAACATAGATTTCAGTTGGGATACTTCTGCTTCACAGTATGAAGAACTCTACTCTAAGTCCATGGCCAGAGCAAGGGCGACAATTCGCCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009507 GO:0009536 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019252 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 map00500 map01100 map01110 map02026

Pfam Domains

Protein Families

Glyco_transf_5 Glycos_transf_1

Protein Analysis

1000

Amino Acids

113.39

Weight (kDa)

5.7

Isoelectric Point (pI)

48.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	517 - 744	2.8e-59	Starch synthase catalytic domain
Glyco_transf_4	PF13439	518 - 732	4.6e-09	Glycosyltransferase Family 4
Glyco_trans_4_4	PF13579	519 - 669	5.5e-06	Glycosyl transferase 4-like domain
Glycos_transf_1	PF00534	801 - 960	9.9e-10	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	803 - 921	5.7e-09	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18240
fragaria_vesca	FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130
malus_domestica	MD05G1289600.v1.1 MD10G1265500.v1.1
prunus_persica	Prupe.4G076100_v2.0.a1
pyrus_communis	pycom05g26670 pycom10g22140
rosa_chinensis	RchiOBHm_Chr5g0013241
rosa_laevigata	RLG00000032000
rosa_multiflora	Rmu_co8500739.1_g000001 Rmu_sc0004521.1_g000017
rosa_roxburghii	Rroxscaffold_1G00063270
rosa_rugosa	Rorug05G0008200.1 Rorug05G0008300.1 Rorug05G0008400
rosa_samantha	Rh5AG103000 Rh5BG099800 Rh5CG111200 Rh5DG098600
rosa_wichuraiana	Rw5G008990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1352
AarI	CACCTGC	1 cut(s)	2038
AasI	GACNNNNNNGTC	1 cut(s)	2164
Acc16I	TGCGCA	1 cut(s)	2192
Acc36I	ACCTGC	2 cut(s)	2006, 2038
AccB1I	GGYRCC	1 cut(s)	2434
AccI	GTMKAC	2 cut(s)	1010, 1711
AccII	CGCG	1 cut(s)	85
AciI	CCGC	7 cut(s)	5, 224, 416, 616, 647, 1688, 2887
AclI	AACGTT	2 cut(s)	865, 1837
AclWI	GGATC	2 cut(s)	195, 2123
AcoI	YGGCCR	2 cut(s)	2065, 2973
AcsI	RAATTY	7 cut(s)	79, 628, 985, 1247, 1328, 2256, 2543
AcuI	CTGAAG	5 cut(s)	968, 1172, 1834, 2019, 2768
AcyI	GRCGYC	1 cut(s)	2045
AdeI	CACNNNGTG	1 cut(s)	1615
AfeI	AGCGCT	1 cut(s)	1863
AfiI	CCNNNNNNNGG	6 cut(s)	1684, 2129, 2400, 2414, 2444, 2982
AflIII	ACRYGT	1 cut(s)	841
AhdI	GACNNNNNGTC	1 cut(s)	2044
AjiI	CACGTC	1 cut(s)	2210
AjnI	CCWGG	3 cut(s)	20, 33, 62
Alw21I	GWGCWC	1 cut(s)	460
Alw26I	GTCTC	6 cut(s)	257, 533, 591, 2219, 2398, 2817
AlwI	GGATC	2 cut(s)	195, 2123
AlwNI	CAGNNNCTG	1 cut(s)	542
Ama87I	CYCGRG	2 cut(s)	207, 447
Aor51HI	AGCGCT	1 cut(s)	1863
AoxI	GGCC	3 cut(s)	1674, 2065, 2973
ApaI	GGGCCC	1 cut(s)	1678
ApeKI	GCWGC	7 cut(s)	380, 499, 563, 726, 1859, 2633, 2890
ApoI	RAATTY	7 cut(s)	79, 628, 985, 1247, 1328, 2256, 2543
Asp700I	GAANNNNTTC	2 cut(s)	1623, 1752
AspLEI	GCGC	4 cut(s)	69, 87, 1864, 2193
AspS9I	GGNCC	4 cut(s)	283, 1180, 1674, 1675
AsuHPI	GGTGA	5 cut(s)	19, 650, 1306, 1577, 2160
AsuII	TTCGAA	3 cut(s)	353, 1063, 2791
AvaI	CYCGRG	2 cut(s)	207, 447
AvaII	GGWCC	2 cut(s)	283, 1180
AxyI	CCTNAGG	2 cut(s)	1670, 2867
BaeGI	GKGCMC	1 cut(s)	1678
BalI	TGGCCA	2 cut(s)	2067, 2975
BanI	GGYRCC	1 cut(s)	2434
BanII	GRGCYC	1 cut(s)	1678
BbsI	GAAGAC	1 cut(s)	1745
Bbv12I	GWGCWC	1 cut(s)	460
BbvCI	CCTCAGC	1 cut(s)	2199
BbvI	GCAGC	7 cut(s)	392, 486, 550, 738, 1871, 2620, 2902
BccI	CCATC	8 cut(s)	577, 635, 1291, 1352, 1523, 1700, 2665, 2726
BceAI	ACGGC	1 cut(s)	1323
BcgI	CGANNNNNNTGC	4 cut(s)	369, 403, 2416, 2450
BciT130I	CCWGG	3 cut(s)	22, 35, 64
BciVI	GTATCC	1 cut(s)	2923
BclI	TGATCA	2 cut(s)	373, 2578
BcoDI	GTCTC	6 cut(s)	257, 533, 591, 2219, 2398, 2817
BfaI	CTAG	7 cut(s)	192, 1001, 1679, 1983, 2336, 2378, 2489
BfmI	CTRYAG	1 cut(s)	173
BfoI	RGCGCY	2 cut(s)	70, 1865
BfuAI	ACCTGC	2 cut(s)	2006, 2038
BfuI	GTATCC	1 cut(s)	2923
BisI	GCNGC	8 cut(s)	381, 500, 564, 727, 1860, 2634, 2888, 2891
BlsI	GCNGC	8 cut(s)	382, 501, 565, 728, 1861, 2635, 2889, 2892
BmcAI	AGTACT	1 cut(s)	996
Bme1390I	CCNGG	3 cut(s)	22, 35, 64
Bme18I	GGWCC	2 cut(s)	283, 1180
BmeRI	GACNNNNNGTC	1 cut(s)	2044
BmeT110I	CYCGRG	2 cut(s)	207, 447
BmgBI	CACGTC	1 cut(s)	2210
BmgT120I	GGNCC	4 cut(s)	283, 1180, 1674, 1675
BmiI	GGNNCC	5 cut(s)	285, 1337, 1676, 1938, 2436
BmrFI	CCNGG	3 cut(s)	22, 35, 64
BmsI	GCATC	9 cut(s)	535, 603, 738, 1122, 1384, 2263, 2269, 2290, 2408
BpiI	GAAGAC	1 cut(s)	1745
BplI	GAGNNNNNCTC	2 cut(s)	190, 222
BpmI	CTGGAG	2 cut(s)	46, 1819
Bpu10I	CCTNAGC	1 cut(s)	2199
Bpu14I	TTCGAA	3 cut(s)	353, 1063, 2791
BpuEI	CTTGAG	2 cut(s)	552, 1886
BsaAI	YACGTR	1 cut(s)	551
BsaBI	GATNNNNATC	1 cut(s)	2304
BsaHI	GRCGYC	1 cut(s)	2045
BsaI	GGTCTC	3 cut(s)	591, 2219, 2398
BsaJI	CCNNGG	5 cut(s)	34, 592, 1322, 2017, 2970
BsaWI	WCCGGW	3 cut(s)	50, 150, 2122
BsaXI	ACNNNNNCTCC	2 cut(s)	2199, 2229
Bsc4I	CCNNNNNNNGG	6 cut(s)	1684, 2129, 2400, 2414, 2444, 2982
Bse118I	RCCGGY	1 cut(s)	1182
Bse1I	ACTGG	2 cut(s)	2522, 2737
Bse21I	CCTNAGG	2 cut(s)	1670, 2867
Bse3DI	GCAATG	3 cut(s)	664, 1592, 2703
Bse8I	GATNNNNATC	1 cut(s)	2304
BseBI	CCWGG	3 cut(s)	22, 35, 64
BseDI	CCNNGG	5 cut(s)	34, 592, 1322, 2017, 2970
BseGI	GGATG	6 cut(s)	588, 841, 1306, 1534, 1780, 2423
BseJI	GATNNNNATC	1 cut(s)	2304
BseLI	CCNNNNNNNGG	6 cut(s)	1684, 2129, 2400, 2414, 2444, 2982
BseMI	GCAATG	3 cut(s)	664, 1592, 2703
BseMII	CTCAG	8 cut(s)	172, 252, 312, 817, 932, 1513, 2190, 2868
BseNI	ACTGG	2 cut(s)	2522, 2737
BseRI	GAGGAG	2 cut(s)	581, 824
BseSI	GKGCMC	1 cut(s)	1678
BseXI	GCAGC	7 cut(s)	392, 486, 550, 738, 1871, 2620, 2902
BsgI	GTGCAG	3 cut(s)	1878, 2010, 2154
Bsh1236I	CGCG	1 cut(s)	85
Bsh1285I	CGRYCG	2 cut(s)	276, 1657
BshFI	GGCC	3 cut(s)	1676, 2067, 2975
BshNI	GGYRCC	1 cut(s)	2434
BsiEI	CGRYCG	2 cut(s)	276, 1657
BsiHKAI	GWGCWC	1 cut(s)	460
BsiHKCI	CYCGRG	2 cut(s)	207, 447
BsiSI	CCGG	4 cut(s)	51, 151, 1183, 2123
BslFI	GGGAC	5 cut(s)	269, 1620, 1964, 2035, 2841
BslI	CCNNNNNNNGG	6 cut(s)	1684, 2129, 2400, 2414, 2444, 2982
BsmAI	GTCTC	6 cut(s)	257, 533, 591, 2219, 2398, 2817
BsmFI	GGGAC	5 cut(s)	269, 1620, 1964, 2035, 2841
BsmI	GAATGC	5 cut(s)	361, 418, 520, 962, 2094
BsnI	GGCC	3 cut(s)	1676, 2067, 2975
Bso31I	GGTCTC	3 cut(s)	591, 2219, 2398
BsoBI	CYCGRG	2 cut(s)	207, 447
Bsp119I	TTCGAA	3 cut(s)	353, 1063, 2791
Bsp120I	GGGCCC	1 cut(s)	1674
Bsp1286I	GDGCHC	2 cut(s)	460, 1678
Bsp1407I	TGTACA	2 cut(s)	1110, 2449
Bsp143I	GATC	8 cut(s)	200, 373, 1024, 1429, 1654, 2115, 2332, 2578
Bsp19I	CCATGG	1 cut(s)	2970
BspACI	CCGC	7 cut(s)	5, 224, 416, 616, 647, 1688, 2887
BspANI	GGCC	3 cut(s)	1676, 2067, 2975
BspCNI	CTCAG	8 cut(s)	171, 253, 311, 816, 931, 1512, 2191, 2869
BspFNI	CGCG	1 cut(s)	85
BspHI	TCATGA	3 cut(s)	1441, 1912, 2575
BspLI	GGNNCC	5 cut(s)	285, 1337, 1676, 1938, 2436
BspMAI	CTGCAG	1 cut(s)	177
BspMI	ACCTGC	2 cut(s)	2006, 2038
BspPI	GGATC	2 cut(s)	195, 2123
BspQI	GCTCTTC	3 cut(s)	465, 489, 1799
BspT104I	TTCGAA	3 cut(s)	353, 1063, 2791
BspT107I	GGYRCC	1 cut(s)	2434
BspTNI	GGTCTC	3 cut(s)	591, 2219, 2398
BsrDI	GCAATG	3 cut(s)	664, 1592, 2703
BsrFI	RCCGGY	1 cut(s)	1182
BsrGI	TGTACA	2 cut(s)	1110, 2449
BsrI	ACTGG	2 cut(s)	2522, 2737
BssAI	RCCGGY	1 cut(s)	1182
BssECI	CCNNGG	5 cut(s)	34, 592, 1322, 2017, 2970
BssMI	GATC	8 cut(s)	200, 373, 1024, 1429, 1654, 2115, 2332, 2578
BssNI	GRCGYC	1 cut(s)	2045
BssT1I	CCWWGG	3 cut(s)	1322, 2017, 2970
Bst2UI	CCWGG	3 cut(s)	22, 35, 64
Bst4CI	ACNGT	8 cut(s)	1140, 1744, 1809, 2164, 2319, 2776, 2837, 2946
Bst6I	CTCTTC	9 cut(s)	173, 191, 240, 465, 489, 1197, 1782, 1799, 2787
BstACI	GRCGYC	1 cut(s)	2045
BstAPI	GCANNNNNTGC	1 cut(s)	997
BstAUI	TGTACA	2 cut(s)	1110, 2449
BstBAI	YACGTR	1 cut(s)	551
BstBI	TTCGAA	3 cut(s)	353, 1063, 2791
BstC8I	GCNNGC	5 cut(s)	173, 1020, 1459, 1885, 2069
BstDSI	CCRYGG	1 cut(s)	2970
BstF5I	GGATG	6 cut(s)	588, 841, 1306, 1534, 1780, 2423
BstFNI	CGCG	1 cut(s)	85
BstH2I	RGCGCY	2 cut(s)	70, 1865
BstHHI	GCGC	4 cut(s)	69, 87, 1864, 2193
BstKTI	GATC	8 cut(s)	203, 376, 1027, 1432, 1657, 2118, 2335, 2581
BstMAI	GTCTC	6 cut(s)	257, 533, 591, 2219, 2398, 2817
BstMBI	GATC	8 cut(s)	200, 373, 1024, 1429, 1654, 2115, 2332, 2578
BstMCI	CGRYCG	2 cut(s)	276, 1657
BstMWI	GCNNNNNNNGC	6 cut(s)	181, 997, 1028, 1934, 2300, 2494
BstNI	CCWGG	3 cut(s)	22, 35, 64
BstNSI	RCATGY	3 cut(s)	1321, 1461, 2468
BstSCI	CCNGG	3 cut(s)	20, 33, 62
BstSFI	CTRYAG	1 cut(s)	173
BstSLI	GKGCMC	1 cut(s)	1678
BstUI	CGCG	1 cut(s)	85
BstV1I	GCAGC	7 cut(s)	392, 486, 550, 738, 1871, 2620, 2902
BstV2I	GAAGAC	1 cut(s)	1745
BstX2I	RGATCY	1 cut(s)	200
BstXI	CCANNNNNNTGG	1 cut(s)	1947
BstYI	RGATCY	1 cut(s)	200
Bsu36I	CCTNAGG	2 cut(s)	1670, 2867
BsuI	GTATCC	1 cut(s)	2923
BsuRI	GGCC	3 cut(s)	1676, 2067, 2975
BtgI	CCRYGG	1 cut(s)	2970
BtgZI	GCGATG	1 cut(s)	2704
BtrI	CACGTC	1 cut(s)	2210
BtsCI	GGATG	6 cut(s)	588, 841, 1306, 1534, 1780, 2423
BtsI	GCAGTG	2 cut(s)	2200, 2322
BtsIMutI	CAGTG	4 cut(s)	1740, 2200, 2295, 2322
BveI	ACCTGC	2 cut(s)	2006, 2038
Cac8I	GCNNGC	5 cut(s)	173, 1020, 1459, 1885, 2069
CaiI	CAGNNNCTG	1 cut(s)	542
CciI	TCATGA	3 cut(s)	1441, 1912, 2575
CfoI	GCGC	4 cut(s)	69, 87, 1864, 2193
Cfr10I	RCCGGY	1 cut(s)	1182
Cfr13I	GGNCC	4 cut(s)	283, 1180, 1674, 1675
CseI	GACGC	1 cut(s)	2034
CsiI	ACCWGGT	1 cut(s)	20
DpnI	GATC	8 cut(s)	202, 375, 1026, 1431, 1656, 2117, 2334, 2580
DpnII	GATC	8 cut(s)	200, 373, 1024, 1429, 1654, 2115, 2332, 2578
DraIII	CACNNNGTG	1 cut(s)	1615
DrdI	GACNNNNNNGTC	1 cut(s)	2164
DriI	GACNNNNNGTC	1 cut(s)	2044
DseDI	GACNNNNNNGTC	1 cut(s)	2164
EaeI	YGGCCR	2 cut(s)	2065, 2973
Eam1104I	CTCTTC	9 cut(s)	173, 191, 240, 465, 489, 1197, 1782, 1799, 2787
Eam1105I	GACNNNNNGTC	1 cut(s)	2044
EarI	CTCTTC	9 cut(s)	173, 191, 240, 465, 489, 1197, 1782, 1799, 2787
Eco130I	CCWWGG	3 cut(s)	1322, 2017, 2970
Eco24I	GRGCYC	1 cut(s)	1678
Eco31I	GGTCTC	3 cut(s)	591, 2219, 2398
Eco32I	GATATC	1 cut(s)	1509
Eco47I	GGWCC	2 cut(s)	283, 1180
Eco47III	AGCGCT	1 cut(s)	1863
Eco57I	CTGAAG	5 cut(s)	968, 1172, 1834, 2019, 2768
Eco81I	CCTNAGG	2 cut(s)	1670, 2867
Eco88I	CYCGRG	2 cut(s)	207, 447
EcoO109I	RGGNCCY	2 cut(s)	1674, 1675
EcoRI	GAATTC	1 cut(s)	2256
EcoRII	CCWGG	3 cut(s)	20, 33, 62
EcoRV	GATATC	1 cut(s)	1509
EcoT14I	CCWWGG	3 cut(s)	1322, 2017, 2970
EcoT22I	ATGCAT	3 cut(s)	2284, 2305, 2423
EcoT38I	GRGCYC	1 cut(s)	1678
ErhI	CCWWGG	3 cut(s)	1322, 2017, 2970
FalI	AAGNNNNNCTT	2 cut(s)	1077, 1109
FaqI	GGGAC	5 cut(s)	269, 1620, 1964, 2035, 2841
FbaI	TGATCA	2 cut(s)	373, 2578
FblI	GTMKAC	2 cut(s)	1010, 1711
Fnu4HI	GCNGC	8 cut(s)	381, 500, 564, 727, 1860, 2634, 2888, 2891
FokI	GGATG	6 cut(s)	595, 848, 1313, 1541, 1767, 2430
FriOI	GRGCYC	1 cut(s)	1678
Fsp4HI	GCNGC	8 cut(s)	381, 500, 564, 727, 1860, 2634, 2888, 2891
FspBI	CTAG	7 cut(s)	192, 1001, 1679, 1983, 2336, 2378, 2489
FspI	TGCGCA	1 cut(s)	2192
GlaI	GCGC	4 cut(s)	68, 86, 1863, 2192
GluI	GCNGC	8 cut(s)	381, 500, 564, 727, 1860, 2634, 2888, 2891
GsuI	CTGGAG	2 cut(s)	46, 1819
HaeII	RGCGCY	2 cut(s)	70, 1865
HaeIII	GGCC	3 cut(s)	1676, 2067, 2975
HapII	CCGG	4 cut(s)	51, 151, 1183, 2123
HgaI	GACGC	1 cut(s)	2034
HhaI	GCGC	4 cut(s)	69, 87, 1864, 2193
Hin1I	GRCGYC	1 cut(s)	2045
Hin6I	GCGC	4 cut(s)	67, 85, 1862, 2191
HinP1I	GCGC	4 cut(s)	67, 85, 1862, 2191
HincII	GTYRAC	2 cut(s)	1011, 1712
HindII	GTYRAC	2 cut(s)	1011, 1712
HpaII	CCGG	4 cut(s)	51, 151, 1183, 2123
HphI	GGTGA	5 cut(s)	19, 650, 1306, 1577, 2160
Hpy166II	GTNNAC	7 cut(s)	1011, 1111, 1712, 2207, 2322, 2450, 2678
Hpy8I	GTNNAC	7 cut(s)	1011, 1111, 1712, 2207, 2322, 2450, 2678
Hpy99I	CGWCG	1 cut(s)	1437
HpyAV	CCTTC	8 cut(s)	396, 943, 1284, 1597, 1742, 1855, 2533, 2896
HpyCH4III	ACNGT	8 cut(s)	1140, 1744, 1809, 2164, 2319, 2776, 2837, 2946
HpyCH4IV	ACGT	8 cut(s)	550, 841, 865, 1822, 1837, 2061, 2209, 2848
HpyF10VI	GCNNNNNNNGC	6 cut(s)	181, 997, 1028, 1934, 2300, 2494
HpySE526I	ACGT	8 cut(s)	550, 841, 865, 1822, 1837, 2061, 2209, 2848
Hsp92I	GRCGYC	1 cut(s)	2045
HspAI	GCGC	4 cut(s)	67, 85, 1862, 2191
Ksp22I	TGATCA	2 cut(s)	373, 2578
Kzo9I	GATC	8 cut(s)	200, 373, 1024, 1429, 1654, 2115, 2332, 2578
LguI	GCTCTTC	3 cut(s)	465, 489, 1799
LmnI	GCTCC	5 cut(s)	712, 811, 1335, 1942, 2485
Lsp1109I	GCAGC	7 cut(s)	392, 486, 550, 738, 1871, 2620, 2902
LweI	GCATC	9 cut(s)	535, 603, 738, 1122, 1384, 2263, 2269, 2290, 2408
MabI	ACCWGGT	1 cut(s)	20
MaeI	CTAG	7 cut(s)	192, 1001, 1679, 1983, 2336, 2378, 2489
MaeII	ACGT	8 cut(s)	550, 841, 865, 1822, 1837, 2061, 2209, 2848
MaeIII	GTNAC	7 cut(s)	777, 1041, 1486, 1664, 1869, 2155, 2166
MalI	GATC	8 cut(s)	202, 375, 1026, 1431, 1656, 2117, 2334, 2580
MboI	GATC	8 cut(s)	200, 373, 1024, 1429, 1654, 2115, 2332, 2578
MfeI	CAATTG	2 cut(s)	1386, 2553
MflI	RGATCY	1 cut(s)	200
MhlI	GDGCHC	2 cut(s)	460, 1678
MlsI	TGGCCA	2 cut(s)	2067, 2975
MluNI	TGGCCA	2 cut(s)	2067, 2975
MlyI	GAGTC	9 cut(s)	245, 567, 887, 908, 1127, 1439, 1703, 2383, 2581
MmeI	TCCRAC	3 cut(s)	379, 1350, 2233
Mox20I	TGGCCA	2 cut(s)	2067, 2975
Mph1103I	ATGCAT	3 cut(s)	2284, 2305, 2423
MroXI	GAANNNNTTC	2 cut(s)	1623, 1752
MscI	TGGCCA	2 cut(s)	2067, 2975
MseI	TTAA	9 cut(s)	324, 605, 696, 1262, 1973, 2127, 2229, 2856, 3001
MslI	CAYNNNNRTG	2 cut(s)	1215, 1911
Msp20I	TGGCCA	2 cut(s)	2067, 2975
MspI	CCGG	4 cut(s)	51, 151, 1183, 2123
MspR9I	CCNGG	3 cut(s)	22, 35, 64
MunI	CAATTG	2 cut(s)	1386, 2553
Mva1269I	GAATGC	5 cut(s)	361, 418, 520, 962, 2094
MvaI	CCWGG	3 cut(s)	22, 35, 64
MvnI	CGCG	1 cut(s)	85
MwoI	GCNNNNNNNGC	6 cut(s)	181, 997, 1028, 1934, 2300, 2494
NcoI	CCATGG	1 cut(s)	2970
NdeII	GATC	8 cut(s)	200, 373, 1024, 1429, 1654, 2115, 2332, 2578
NlaIV	GGNNCC	5 cut(s)	285, 1337, 1676, 1938, 2436
NmeAIII	GCCGAG	1 cut(s)	1958
NmuCI	GTSAC	5 cut(s)	777, 1486, 1664, 2155, 2166
NsbI	TGCGCA	1 cut(s)	2192
NsiI	ATGCAT	3 cut(s)	2284, 2305, 2423
NspI	RCATGY	3 cut(s)	1321, 1461, 2468
NspV	TTCGAA	3 cut(s)	353, 1063, 2791
PaeI	GCATGC	1 cut(s)	1461
PagI	TCATGA	3 cut(s)	1441, 1912, 2575
PaqCI	CACCTGC	1 cut(s)	2038
PciSI	GCTCTTC	3 cut(s)	465, 489, 1799
PctI	GAATGC	5 cut(s)	361, 418, 520, 962, 2094
PdmI	GAANNNNTTC	2 cut(s)	1623, 1752
PflFI	GACNNNGTC	1 cut(s)	2211
PkrI	GCNGC	8 cut(s)	382, 501, 565, 728, 1861, 2635, 2889, 2892
Ple19I	CGATCG	1 cut(s)	1657
PleI	GAGTC	9 cut(s)	245, 566, 886, 907, 1126, 1439, 1702, 2382, 2580
PpsI	GAGTC	9 cut(s)	245, 566, 886, 907, 1126, 1439, 1702, 2382, 2580
Ppu21I	YACGTR	1 cut(s)	551
PsiI	TTATAA	1 cut(s)	1352
Psp1406I	AACGTT	2 cut(s)	865, 1837
Psp6I	CCWGG	3 cut(s)	20, 33, 62
PspGI	CCWGG	3 cut(s)	20, 33, 62
PspN4I	GGNNCC	5 cut(s)	285, 1337, 1676, 1938, 2436
PspOMI	GGGCCC	1 cut(s)	1674
PspPI	GGNCC	4 cut(s)	283, 1180, 1674, 1675
PstI	CTGCAG	1 cut(s)	177
PstNI	CAGNNNCTG	1 cut(s)	542
PsuI	RGATCY	1 cut(s)	200
PsyI	GACNNNGTC	1 cut(s)	2211
PvuI	CGATCG	1 cut(s)	1657
RseI	CAYNNNNRTG	2 cut(s)	1215, 1911
SalI	GTCGAC	2 cut(s)	1009, 1710
SapI	GCTCTTC	3 cut(s)	465, 489, 1799
SaqAI	TTAA	9 cut(s)	324, 605, 696, 1262, 1973, 2127, 2229, 2856, 3001
SatI	GCNGC	8 cut(s)	381, 500, 564, 727, 1860, 2634, 2888, 2891
Sau3AI	GATC	8 cut(s)	200, 373, 1024, 1429, 1654, 2115, 2332, 2578
Sau96I	GGNCC	4 cut(s)	283, 1180, 1674, 1675
ScaI	AGTACT	1 cut(s)	996
SchI	GAGTC	9 cut(s)	245, 567, 887, 908, 1127, 1439, 1703, 2383, 2581
ScrFI	CCNGG	3 cut(s)	22, 35, 64
SduI	GDGCHC	2 cut(s)	460, 1678
SexAI	ACCWGGT	1 cut(s)	20
SfaNI	GCATC	9 cut(s)	535, 603, 738, 1122, 1384, 2263, 2269, 2290, 2408
SfcI	CTRYAG	1 cut(s)	173
SfuI	TTCGAA	3 cut(s)	353, 1063, 2791
SinI	GGWCC	2 cut(s)	283, 1180
SmiMI	CAYNNNNRTG	2 cut(s)	1215, 1911
SmlI	CTYRAG	2 cut(s)	567, 1865
SmoI	CTYRAG	2 cut(s)	567, 1865
SphI	GCATGC	1 cut(s)	1461
SsiI	CCGC	7 cut(s)	5, 224, 416, 616, 647, 1688, 2887
SspI	AATATT	1 cut(s)	427
SspMI	CTAG	7 cut(s)	192, 1001, 1679, 1983, 2336, 2378, 2489
StyD4I	CCNGG	3 cut(s)	20, 33, 62
StyI	CCWWGG	3 cut(s)	1322, 2017, 2970
TaaI	ACNGT	8 cut(s)	1140, 1744, 1809, 2164, 2319, 2776, 2837, 2946
TaiI	ACGT	8 cut(s)	553, 844, 868, 1825, 1840, 2064, 2212, 2851
TaqI	TCGA	8 cut(s)	347, 353, 1010, 1063, 1432, 1704, 1711, 2791
TaqII	GACCGA	1 cut(s)	262
TatI	WGTACW	7 cut(s)	164, 994, 1110, 2314, 2319, 2449, 2524
TauI	GCSGC	1 cut(s)	2890
Tru1I	TTAA	9 cut(s)	324, 605, 696, 1262, 1973, 2127, 2229, 2856, 3001
Tru9I	TTAA	9 cut(s)	324, 605, 696, 1262, 1973, 2127, 2229, 2856, 3001
TscAI	CASTG	4 cut(s)	1747, 2200, 2302, 2329
TseFI	GTSAC	5 cut(s)	777, 1486, 1664, 2155, 2166
TseI	GCWGC	7 cut(s)	380, 499, 563, 726, 1859, 2633, 2890
Tsp45I	GTSAC	5 cut(s)	777, 1486, 1664, 2155, 2166
TspGWI	ACGGA	2 cut(s)	848, 1450
TspRI	CASTG	4 cut(s)	1747, 2200, 2302, 2329
Tth111I	GACNNNGTC	1 cut(s)	2211
VpaK11BI	GGWCC	2 cut(s)	283, 1180
XapI	RAATTY	7 cut(s)	79, 628, 985, 1247, 1328, 2256, 2543
XceI	RCATGY	3 cut(s)	1321, 1461, 2468
XmiI	GTMKAC	2 cut(s)	1010, 1711
XmnI	GAANNNNTTC	2 cut(s)	1623, 1752
XspI	CTAG	7 cut(s)	192, 1001, 1679, 1983, 2336, 2378, 2489
ZrmI	AGTACT	1 cut(s)	996
Zsp2I	ATGCAT	3 cut(s)	2284, 2305, 2423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.