Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0005866

Physical Location & Seq

Genomic Coordinates Forward (+)

10126940 .. 10133190

Gene Structure 6251 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032000

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3036 bp

ATGGCGGTGAGGCTAACGACCTGGTTTGTGAGCCAGGGGATTAGCATTTCCGGTTCAAACTCCAGGCGCTCACATTCAAATTCGCGCTTCTCATTTGCTTCCTCCTCTCCTGCTTCTTCTTCTTATTCTTCTTCTTCTTCGTCCTGTAAGCTACGCCACTGGAATCTCAGTTGTACTTGCCTGCAGAAGAGGCAAAGAGCTAGGAAGAAATCCTCTCAGGAACAGTCTTCTGCGGATTTCCTGCCAAGTGGCGAAGAGGACTCTGAATCTGAGACTGCTTCGGTCGGCATGGTCCCTCTCTTGAGCTCAGAAAGCGTATCTGATGATGATGTTAATACTATCAATTCAAACGATTCGATTTTGAATGCTCTTACTGCATCTGATCAAGCAGCACCTTCGGATTTGGTTGGAATGATAAGGAATGCGGAGAAAAATATTCTTCTCTTGAATCAAGCTCGGGTTAGTGCTCTTCAAGACCTTGACAAGATTCTATCTGAAAAGGAAGAACTGCAAGGAGAAATGAATGCTTTGGAAATGAGATTGGCCGAGACTGATGCACGTATCAGAGTGGCTGCTCAAGAGAAAGTAAGGATGGAACTCCTCGGAGACCACTTAAGCCAGATGCGGAATGAACAGAATTTCAATGGTGATGGTGCGGAAACAAGCAATGGGGTTGAGATTTTTGAGAGTGAAAGTGAGCTATTTAATGAAGAAGCTCCTTTGCCATACAAAAGTAGCATCAATTCGCTTGTAGCAAATCTTAGTTCATTGAGATTAGAAAATGTGTCACTTAGGAATGATATACAGGAACTCAGAGAGGTGCTTAGTAATATGAAAAATACGGATGAACGTGTGGTCATGCTTGAAAAACAACGTTCGTCTTTGGAGTCTGCCCTAAAAGATTTGGAGTCCAAATTGGTAGTTTCTCAGGAAGATGTTTCCAAACTTTCCAATCTGAAGGTTGAATGCACAGGTTTATGGGAAAAGGTGGAGAATTTGCAAGTACTGCTAGATAAGTCGACCAAGCAGGCAGATCAAGCTATTATAGTGTTACAGCAAAATCAGGAGATTCGAAAAAAGGTTGATAAATTAGAAGAATCTCTTGAAAAAGCTAATGTGTATAAGGAGTCATCAGAAAAGATGCAACAGTATAATGAGCTTATGCAACAAAAGATAAAACTAATGGAGGACCGGCTTCAGCGTTCGGATGAAGAGATACATTCTTATGTTCAGTTATATCAAGAATCTGTGGAGGAATTTCAAGATACCTTAAATACTCTAAAAGAAGAAAGCAAGAGAAGGGTGATGGATGAACCTGTTGATGACATGCCTTGGGAATTTTGGAGCCGTTTATTGCTTATAATTGATGGTTGGTTGTTGGAAAAGAAAATATCAATTGATGATGCAAAGGCGTTGAGAGAAATGGTATGGAAAAGAGATCGACGGATTCATGACTCATACATGGCATGCAAGGAAAAGAATGTAAATGAGGCTGTGACTACATTTCTCAGACTGATATCATCACAAACAAGTTCAGGATTGCATGTCGTTCATATCGCAGCAGAGATGGCACCAGTTGCTAAGGTTGGTGGTTTGGGTGATGTTGTAGCTGGTCTTAGTAAAGCATTGCAGAAGAAGGGACACCTTGTGGAAATTATTCTTCCCAAGTATGATTGTATGGAGTACGATCGTGTTCGTGACCTAAGGGCCCTAGATGTGGCTGTAGAGTCGTACTTCGATGGTCGACTATTCAAGAATAAAATCTGGGTTGGCACTGTTGAAGGTCTTCCTGTATATTTTATTGAGCCTCTTCATCCCGATAAGCTCTTCTGGAGAGGACAGGTTTATGGAGAACGTGATGATTTCAAACGTTTTTCCTTCTTCAGTCGTGCAGCGCTTGAGTTACTTCTTCAAGCTGGCAAGAAACCTGACATAATTCATTGTCATGATTGGCAGACAGCTTTTGTGGCTCCACTCTATTGGGACTTGTATGCCCCAAAGGGATTAAACTCGGCTAGGATATGTTTTACCTGCCACAACTTTGAATACCAAGGGACTGCACCTGCTTCAGACTTGGCGTCTTGTGGTCTTGACGTTGGCCAGCTAAACAGACCAGATAGAATGCAGGACAACTCAGCACATGATAGGATCAATCCGGTTAAGGGTGCAGTTGTATTCTCTAATATGGTGACAACGGTGTCACCTACCTATGCGCAAGAGGTGCGCAGTGCTGAGGGTGGACGTGGTCTCCATTCAACACTTAATTTTCATTCTAAAAAGTTCGTTGGAATTCTCAATGGAATTGATGCTGATGCATGGAATCCTGCCACTGATGCATATCTCAAAGTACAGTACACTGCCAATGATCTTGGGGGGAAAGCAGAAAATAAGGAAGCTATTAGAAAGAGTCTAGGGCTTTCGTATGCCAATGTCAGGAGACCATTGGTGGGATGCATAACGAGATTGGTGCCACAGAAAGGTGTACATCTCATCAGACATGCGATTTATAGAACATTGGAGCTAGGAGGGCAGTTTGTTCTTCTGGGTTCAAGTCCAGTACATCATATTCAGAAGGAATTTGAGGCAATTGCAAACCATTTTCAGAGTCATGATCATATTAGGTTGATATTGAAGTATGATGAAACTCTTTCCCATTCCATTTATGCTGCTTCTGATATGTTCATCGTTCCATCAATCTTTGAGCCTTGTGGACTTACACAGATGATAGCAATGAGATATGGTTCTATACCCATCGCAAGAAAAACTGGTGGTCTAAATGATAGTGTCTTTGATGTTGATGATGACACCGTACCTCTTCAGTTTCGAAATGGATATTCATTTTTGTCTCCTGATGAACAGGGACTAAACGGTGCTTTGGAACGTGCATTTAACCACTACCTAAGTAAGCCTGAGAGTTGGCGGCAGCTTGTTCAGAAGGATATGAACATAGATTTCAGTTGGGATACTTCTGCTTCACAGTACGAAGAACTCTACTCTAAGTCCGTTGCCAGAGCAAGGGCGACAATTCGCCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009507 GO:0009536 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019252 GO:0033692 GO:0034637 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 map00500 map01100 map01110 map02026

Pfam Domains

Protein Families

Glyco_transf_5 Glycos_transf_1

Protein Analysis

1012

Amino Acids

114.06

Weight (kDa)

5.67

Isoelectric Point (pI)

49.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	515 - 755	7.3e-67	Starch synthase catalytic domain
Glyco_transf_4	PF13439	529 - 743	7.4e-09	Glycosyltransferase Family 4
Glyco_trans_4_4	PF13579	530 - 680	1e-05	Glycosyl transferase 4-like domain
Glycos_transf_1	PF00534	811 - 973	7.9e-10	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	814 - 932	5.7e-09	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0005866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18240
fragaria_vesca	FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130 FvH4_3g06130
malus_domestica	MD05G1289600.v1.1 MD10G1265500.v1.1
prunus_persica	Prupe.4G076100_v2.0.a1
pyrus_communis	pycom05g26670 pycom10g22140
rosa_chinensis	RchiOBHm_Chr5g0013241
rosa_laevigata	RLG00000032000
rosa_multiflora	Rmu_co8500739.1_g000001 Rmu_sc0004521.1_g000017
rosa_roxburghii	Rroxscaffold_1G00063270
rosa_rugosa	Rorug05G0008200.1 Rorug05G0008300.1 Rorug05G0008400
rosa_samantha	Rh5AG103000 Rh5BG099800 Rh5CG111200 Rh5DG098600
rosa_wichuraiana	Rw5G008990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1361
AarI	CACCTGC	1 cut(s)	2071
AasI	GACNNNNNNGTC	1 cut(s)	2197
Acc16I	TGCGCA	2 cut(s)	2214, 2225
Acc36I	ACCTGC	2 cut(s)	2039, 2071
AccB1I	GGYRCC	2 cut(s)	1570, 2467
AccI	GTMKAC	2 cut(s)	1019, 1744
AccII	CGCG	1 cut(s)	85
AciI	CCGC	6 cut(s)	5, 233, 425, 625, 656, 2920
AclI	AACGTT	2 cut(s)	874, 1870
AclWI	GGATC	1 cut(s)	2156
AcoI	YGGCCR	2 cut(s)	543, 2098
AcsI	RAATTY	7 cut(s)	79, 637, 994, 1256, 1337, 2289, 2576
AcuI	CTGAAG	5 cut(s)	977, 1181, 1867, 2052, 2801
AcyI	GRCGYC	1 cut(s)	2078
AdeI	CACNNNGTG	1 cut(s)	1648
AfeI	AGCGCT	1 cut(s)	1896
AfiI	CCNNNNNNNGG	6 cut(s)	1717, 2162, 2433, 2447, 2477, 3015
AflII	CTTAAG	1 cut(s)	613
AflIII	ACRYGT	1 cut(s)	850
AhdI	GACNNNNNGTC	1 cut(s)	2077
AjiI	CACGTC	1 cut(s)	2243
AjnI	CCWGG	3 cut(s)	20, 33, 62
Alw21I	GWGCWC	2 cut(s)	308, 469
Alw26I	GTCTC	6 cut(s)	266, 542, 600, 2252, 2431, 2850
AlwI	GGATC	1 cut(s)	2156
Ama87I	CYCGRG	1 cut(s)	456
Aor51HI	AGCGCT	1 cut(s)	1896
AoxI	GGCC	3 cut(s)	543, 1707, 2098
ApaI	GGGCCC	1 cut(s)	1711
ApeKI	GCWGC	6 cut(s)	389, 572, 1559, 1892, 2666, 2923
ApoI	RAATTY	7 cut(s)	79, 637, 994, 1256, 1337, 2289, 2576
Asp700I	GAANNNNTTC	2 cut(s)	1656, 1785
AspLEI	GCGC	5 cut(s)	69, 87, 1897, 2215, 2226
AspS9I	GGNCC	4 cut(s)	292, 1189, 1707, 1708
AsuHPI	GGTGA	6 cut(s)	19, 659, 1315, 1610, 2193, 2200
AsuII	TTCGAA	2 cut(s)	1072, 2824
AvaI	CYCGRG	1 cut(s)	456
AvaII	GGWCC	2 cut(s)	292, 1189
AxyI	CCTNAGG	1 cut(s)	1703
BaeGI	GKGCMC	1 cut(s)	1711
BalI	TGGCCA	1 cut(s)	2100
BanI	GGYRCC	2 cut(s)	1570, 2467
BanII	GRGCYC	2 cut(s)	308, 1711
BbsI	GAAGAC	2 cut(s)	219, 1778
Bbv12I	GWGCWC	2 cut(s)	308, 469
BbvCI	CCTCAGC	1 cut(s)	2232
BbvI	GCAGC	6 cut(s)	401, 559, 1571, 1904, 2653, 2935
BccI	CCATC	8 cut(s)	586, 644, 1300, 1361, 1561, 1733, 2698, 2759
BceAI	ACGGC	1 cut(s)	1332
BcgI	CGANNNNNNTGC	6 cut(s)	378, 412, 536, 570, 2449, 2483
BciT130I	CCWGG	3 cut(s)	22, 35, 64
BciVI	GTATCC	1 cut(s)	2956
BclI	TGATCA	2 cut(s)	382, 2611
BcoDI	GTCTC	6 cut(s)	266, 542, 600, 2252, 2431, 2850
BfaI	CTAG	6 cut(s)	201, 1010, 1712, 2016, 2411, 2522
BfmI	CTRYAG	2 cut(s)	182, 1722
BfoI	RGCGCY	2 cut(s)	70, 1898
BfrI	CTTAAG	1 cut(s)	613
BfuAI	ACCTGC	2 cut(s)	2039, 2071
BfuI	GTATCC	1 cut(s)	2956
BisI	GCNGC	7 cut(s)	390, 573, 1560, 1893, 2667, 2921, 2924
BlsI	GCNGC	7 cut(s)	391, 574, 1561, 1894, 2668, 2922, 2925
BmcAI	AGTACT	1 cut(s)	1005
Bme1390I	CCNGG	3 cut(s)	22, 35, 64
Bme18I	GGWCC	2 cut(s)	292, 1189
BmeRI	GACNNNNNGTC	1 cut(s)	2077
BmeT110I	CYCGRG	1 cut(s)	456
BmgBI	CACGTC	1 cut(s)	2243
BmgT120I	GGNCC	4 cut(s)	292, 1189, 1707, 1708
BmiI	GGNNCC	6 cut(s)	294, 1346, 1572, 1709, 1971, 2469
BmrFI	CCNGG	3 cut(s)	22, 35, 64
BpiI	GAAGAC	2 cut(s)	219, 1778
BpmI	CTGGAG	2 cut(s)	46, 1852
Bpu10I	CCTNAGC	2 cut(s)	1581, 2232
Bpu14I	TTCGAA	2 cut(s)	1072, 2824
BpuEI	CTTGAG	3 cut(s)	322, 561, 1919
BsaAI	YACGTR	1 cut(s)	560
BsaBI	GATNNNNATC	1 cut(s)	2337
BsaHI	GRCGYC	1 cut(s)	2078
BsaI	GGTCTC	3 cut(s)	600, 2252, 2431
BsaJI	CCNNGG	4 cut(s)	34, 601, 1331, 2050
BsaWI	WCCGGW	2 cut(s)	50, 2155
BsaXI	ACNNNNNCTCC	2 cut(s)	2232, 2262
Bsc4I	CCNNNNNNNGG	6 cut(s)	1717, 2162, 2433, 2447, 2477, 3015
Bse118I	RCCGGY	1 cut(s)	1191
Bse1I	ACTGG	4 cut(s)	164, 1574, 2555, 2770
Bse21I	CCTNAGG	1 cut(s)	1703
Bse3DI	GCAATG	3 cut(s)	673, 1625, 2736
Bse8I	GATNNNNATC	1 cut(s)	2337
BseBI	CCWGG	3 cut(s)	22, 35, 64
BseDI	CCNNGG	4 cut(s)	34, 601, 1331, 2050
BseGI	GGATG	6 cut(s)	597, 850, 1213, 1315, 1813, 2456
BseJI	GATNNNNATC	1 cut(s)	2337
BseLI	CCNNNNNNNGG	6 cut(s)	1717, 2162, 2433, 2447, 2477, 3015
BseMI	GCAATG	3 cut(s)	673, 1625, 2736
BseNI	ACTGG	4 cut(s)	164, 1574, 2555, 2770
BseRI	GAGGAG	2 cut(s)	94, 590
BseSI	GKGCMC	1 cut(s)	1711
BseXI	GCAGC	6 cut(s)	401, 559, 1571, 1904, 2653, 2935
BsgI	GTGCAG	3 cut(s)	1911, 2043, 2187
Bsh1236I	CGCG	1 cut(s)	85
Bsh1285I	CGRYCG	2 cut(s)	285, 1690
BshFI	GGCC	3 cut(s)	545, 1709, 2100
BshNI	GGYRCC	2 cut(s)	1570, 2467
BsiEI	CGRYCG	2 cut(s)	285, 1690
BsiHKAI	GWGCWC	2 cut(s)	308, 469
BsiHKCI	CYCGRG	1 cut(s)	456
BsiSI	CCGG	3 cut(s)	51, 1192, 2156
BslFI	GGGAC	5 cut(s)	278, 1653, 1997, 2068, 2874
BslI	CCNNNNNNNGG	6 cut(s)	1717, 2162, 2433, 2447, 2477, 3015
BsmAI	GTCTC	6 cut(s)	266, 542, 600, 2252, 2431, 2850
BsmFI	GGGAC	5 cut(s)	278, 1653, 1997, 2068, 2874
BsmI	GAATGC	5 cut(s)	370, 427, 529, 971, 2127
BsnI	GGCC	3 cut(s)	545, 1709, 2100
Bso31I	GGTCTC	3 cut(s)	600, 2252, 2431
BsoBI	CYCGRG	1 cut(s)	456
Bsp119I	TTCGAA	2 cut(s)	1072, 2824
Bsp120I	GGGCCC	1 cut(s)	1707
Bsp1286I	GDGCHC	3 cut(s)	308, 469, 1711
Bsp1407I	TGTACA	1 cut(s)	2482
Bsp143I	GATC	7 cut(s)	382, 1033, 1438, 1687, 2148, 2365, 2611
BspACI	CCGC	6 cut(s)	5, 233, 425, 625, 656, 2920
BspANI	GGCC	3 cut(s)	545, 1709, 2100
BspFNI	CGCG	1 cut(s)	85
BspHI	TCATGA	3 cut(s)	1450, 1945, 2608
BspLI	GGNNCC	6 cut(s)	294, 1346, 1572, 1709, 1971, 2469
BspMAI	CTGCAG	1 cut(s)	186
BspMI	ACCTGC	2 cut(s)	2039, 2071
BspPI	GGATC	1 cut(s)	2156
BspQI	GCTCTTC	2 cut(s)	474, 1832
BspT104I	TTCGAA	2 cut(s)	1072, 2824
BspT107I	GGYRCC	2 cut(s)	1570, 2467
BspTI	CTTAAG	1 cut(s)	613
BspTNI	GGTCTC	3 cut(s)	600, 2252, 2431
BsrDI	GCAATG	3 cut(s)	673, 1625, 2736
BsrFI	RCCGGY	1 cut(s)	1191
BsrGI	TGTACA	1 cut(s)	2482
BsrI	ACTGG	4 cut(s)	164, 1574, 2555, 2770
BssAI	RCCGGY	1 cut(s)	1191
BssECI	CCNNGG	4 cut(s)	34, 601, 1331, 2050
BssMI	GATC	7 cut(s)	382, 1033, 1438, 1687, 2148, 2365, 2611
BssNI	GRCGYC	1 cut(s)	2078
BssT1I	CCWWGG	2 cut(s)	1331, 2050
Bst2UI	CCWGG	3 cut(s)	22, 35, 64
Bst4CI	ACNGT	8 cut(s)	225, 1149, 1777, 2197, 2352, 2809, 2870, 2979
Bst6I	CTCTTC	7 cut(s)	182, 249, 474, 1206, 1815, 1832, 2820
BstACI	GRCGYC	1 cut(s)	2078
BstAFI	CTTAAG	1 cut(s)	613
BstAPI	GCANNNNNTGC	3 cut(s)	1006, 1577, 2221
BstAUI	TGTACA	1 cut(s)	2482
BstBAI	YACGTR	1 cut(s)	560
BstBI	TTCGAA	2 cut(s)	1072, 2824
BstC8I	GCNNGC	5 cut(s)	182, 1029, 1468, 1918, 2102
BstF5I	GGATG	6 cut(s)	597, 850, 1213, 1315, 1813, 2456
BstFNI	CGCG	1 cut(s)	85
BstH2I	RGCGCY	2 cut(s)	70, 1898
BstHHI	GCGC	5 cut(s)	69, 87, 1897, 2215, 2226
BstKTI	GATC	7 cut(s)	385, 1036, 1441, 1690, 2151, 2368, 2614
BstMAI	GTCTC	6 cut(s)	266, 542, 600, 2252, 2431, 2850
BstMBI	GATC	7 cut(s)	382, 1033, 1438, 1687, 2148, 2365, 2611
BstMCI	CGRYCG	2 cut(s)	285, 1690
BstNI	CCWGG	3 cut(s)	22, 35, 64
BstNSI	RCATGY	4 cut(s)	1330, 1470, 1547, 2501
BstSCI	CCNGG	3 cut(s)	20, 33, 62
BstSFI	CTRYAG	2 cut(s)	182, 1722
BstSLI	GKGCMC	1 cut(s)	1711
BstUI	CGCG	1 cut(s)	85
BstV1I	GCAGC	6 cut(s)	401, 559, 1571, 1904, 2653, 2935
BstV2I	GAAGAC	2 cut(s)	219, 1778
BstXI	CCANNNNNNTGG	1 cut(s)	1980
Bsu36I	CCTNAGG	1 cut(s)	1703
BsuI	GTATCC	1 cut(s)	2956
BsuRI	GGCC	3 cut(s)	545, 1709, 2100
BtgZI	GCGATG	1 cut(s)	2737
BtrI	CACGTC	1 cut(s)	2243
BtsCI	GGATG	6 cut(s)	597, 850, 1213, 1315, 1813, 2456
BtsI	GCAGTG	2 cut(s)	2233, 2355
BtsIMutI	CAGTG	5 cut(s)	157, 1773, 2233, 2328, 2355
BveI	ACCTGC	2 cut(s)	2039, 2071
Cac8I	GCNNGC	5 cut(s)	182, 1029, 1468, 1918, 2102
CciI	TCATGA	3 cut(s)	1450, 1945, 2608
CfoI	GCGC	5 cut(s)	69, 87, 1897, 2215, 2226
Cfr10I	RCCGGY	1 cut(s)	1191
Cfr13I	GGNCC	4 cut(s)	292, 1189, 1707, 1708
CseI	GACGC	1 cut(s)	2067
CsiI	ACCWGGT	1 cut(s)	20
DpnI	GATC	7 cut(s)	384, 1035, 1440, 1689, 2150, 2367, 2613
DpnII	GATC	7 cut(s)	382, 1033, 1438, 1687, 2148, 2365, 2611
DraIII	CACNNNGTG	1 cut(s)	1648
DrdI	GACNNNNNNGTC	1 cut(s)	2197
DriI	GACNNNNNGTC	1 cut(s)	2077
DseDI	GACNNNNNNGTC	1 cut(s)	2197
EaeI	YGGCCR	2 cut(s)	543, 2098
Eam1104I	CTCTTC	7 cut(s)	182, 249, 474, 1206, 1815, 1832, 2820
Eam1105I	GACNNNNNGTC	1 cut(s)	2077
EarI	CTCTTC	7 cut(s)	182, 249, 474, 1206, 1815, 1832, 2820
Ecl136II	GAGCTC	1 cut(s)	306
Eco130I	CCWWGG	2 cut(s)	1331, 2050
Eco24I	GRGCYC	2 cut(s)	308, 1711
Eco31I	GGTCTC	3 cut(s)	600, 2252, 2431
Eco32I	GATATC	1 cut(s)	1518
Eco47I	GGWCC	2 cut(s)	292, 1189
Eco47III	AGCGCT	1 cut(s)	1896
Eco53kI	GAGCTC	1 cut(s)	306
Eco57I	CTGAAG	5 cut(s)	977, 1181, 1867, 2052, 2801
Eco81I	CCTNAGG	1 cut(s)	1703
Eco88I	CYCGRG	1 cut(s)	456
EcoICRI	GAGCTC	1 cut(s)	306
EcoO109I	RGGNCCY	2 cut(s)	1707, 1708
EcoRI	GAATTC	1 cut(s)	2289
EcoRII	CCWGG	3 cut(s)	20, 33, 62
EcoRV	GATATC	1 cut(s)	1518
EcoT14I	CCWWGG	2 cut(s)	1331, 2050
EcoT22I	ATGCAT	3 cut(s)	2317, 2338, 2456
EcoT38I	GRGCYC	2 cut(s)	308, 1711
ErhI	CCWWGG	2 cut(s)	1331, 2050
FalI	AAGNNNNNCTT	2 cut(s)	1086, 1118
FaqI	GGGAC	5 cut(s)	278, 1653, 1997, 2068, 2874
FbaI	TGATCA	2 cut(s)	382, 2611
FblI	GTMKAC	2 cut(s)	1019, 1744
Fnu4HI	GCNGC	7 cut(s)	390, 573, 1560, 1893, 2667, 2921, 2924
FokI	GGATG	6 cut(s)	604, 857, 1220, 1322, 1800, 2463
FriOI	GRGCYC	2 cut(s)	308, 1711
Fsp4HI	GCNGC	7 cut(s)	390, 573, 1560, 1893, 2667, 2921, 2924
FspBI	CTAG	6 cut(s)	201, 1010, 1712, 2016, 2411, 2522
FspI	TGCGCA	2 cut(s)	2214, 2225
GlaI	GCGC	5 cut(s)	68, 86, 1896, 2214, 2225
GluI	GCNGC	7 cut(s)	390, 573, 1560, 1893, 2667, 2921, 2924
GsuI	CTGGAG	2 cut(s)	46, 1852
HaeII	RGCGCY	2 cut(s)	70, 1898
HaeIII	GGCC	3 cut(s)	545, 1709, 2100
HapII	CCGG	3 cut(s)	51, 1192, 2156
HgaI	GACGC	1 cut(s)	2067
HhaI	GCGC	5 cut(s)	69, 87, 1897, 2215, 2226
Hin1I	GRCGYC	1 cut(s)	2078
Hin6I	GCGC	5 cut(s)	67, 85, 1895, 2213, 2224
HinP1I	GCGC	5 cut(s)	67, 85, 1895, 2213, 2224
HincII	GTYRAC	2 cut(s)	1020, 1745
HindII	GTYRAC	2 cut(s)	1020, 1745
HpaII	CCGG	3 cut(s)	51, 1192, 2156
HphI	GGTGA	6 cut(s)	19, 659, 1315, 1610, 2193, 2200
Hpy166II	GTNNAC	6 cut(s)	1020, 1745, 2240, 2355, 2483, 2711
Hpy8I	GTNNAC	6 cut(s)	1020, 1745, 2240, 2355, 2483, 2711
Hpy99I	CGWCG	1 cut(s)	1446
HpyAV	CCTTC	8 cut(s)	405, 952, 1293, 1630, 1775, 1888, 2566, 2929
HpyCH4III	ACNGT	8 cut(s)	225, 1149, 1777, 2197, 2352, 2809, 2870, 2979
HpyCH4IV	ACGT	8 cut(s)	559, 850, 874, 1855, 1870, 2094, 2242, 2881
HpySE526I	ACGT	8 cut(s)	559, 850, 874, 1855, 1870, 2094, 2242, 2881
Hsp92I	GRCGYC	1 cut(s)	2078
HspAI	GCGC	5 cut(s)	67, 85, 1895, 2213, 2224
Ksp22I	TGATCA	2 cut(s)	382, 2611
Kzo9I	GATC	7 cut(s)	382, 1033, 1438, 1687, 2148, 2365, 2611
LguI	GCTCTTC	2 cut(s)	474, 1832
LmnI	GCTCC	4 cut(s)	721, 1344, 1975, 2518
Lsp1109I	GCAGC	6 cut(s)	401, 559, 1571, 1904, 2653, 2935
MabI	ACCWGGT	1 cut(s)	20
MaeI	CTAG	6 cut(s)	201, 1010, 1712, 2016, 2411, 2522
MaeII	ACGT	8 cut(s)	559, 850, 874, 1855, 1870, 2094, 2242, 2881
MaeIII	GTNAC	7 cut(s)	786, 1050, 1495, 1697, 1902, 2188, 2199
MalI	GATC	7 cut(s)	384, 1035, 1440, 1689, 2150, 2367, 2613
MboI	GATC	7 cut(s)	382, 1033, 1438, 1687, 2148, 2365, 2611
MfeI	CAATTG	2 cut(s)	1395, 2586
MhlI	GDGCHC	3 cut(s)	308, 469, 1711
MlsI	TGGCCA	1 cut(s)	2100
MluNI	TGGCCA	1 cut(s)	2100
MlyI	GAGTC	8 cut(s)	254, 896, 917, 1136, 1448, 1736, 2416, 2614
MmeI	TCCRAC	3 cut(s)	388, 1359, 2266
Mox20I	TGGCCA	1 cut(s)	2100
Mph1103I	ATGCAT	3 cut(s)	2317, 2338, 2456
MroXI	GAANNNNTTC	2 cut(s)	1656, 1785
MscI	TGGCCA	1 cut(s)	2100
MseI	TTAA	9 cut(s)	333, 614, 705, 1271, 2006, 2160, 2262, 2889, 3034
MslI	CAYNNNNRTG	2 cut(s)	1224, 1944
Msp20I	TGGCCA	1 cut(s)	2100
MspCI	CTTAAG	1 cut(s)	613
MspI	CCGG	3 cut(s)	51, 1192, 2156
MspR9I	CCNGG	3 cut(s)	22, 35, 64
MunI	CAATTG	2 cut(s)	1395, 2586
Mva1269I	GAATGC	5 cut(s)	370, 427, 529, 971, 2127
MvaI	CCWGG	3 cut(s)	22, 35, 64
MvnI	CGCG	1 cut(s)	85
NdeII	GATC	7 cut(s)	382, 1033, 1438, 1687, 2148, 2365, 2611
NlaIV	GGNNCC	6 cut(s)	294, 1346, 1572, 1709, 1971, 2469
NmeAIII	GCCGAG	2 cut(s)	571, 1991
NmuCI	GTSAC	5 cut(s)	786, 1495, 1697, 2188, 2199
NsbI	TGCGCA	2 cut(s)	2214, 2225
NsiI	ATGCAT	3 cut(s)	2317, 2338, 2456
NspI	RCATGY	4 cut(s)	1330, 1470, 1547, 2501
NspV	TTCGAA	2 cut(s)	1072, 2824
PaeI	GCATGC	1 cut(s)	1470
PagI	TCATGA	3 cut(s)	1450, 1945, 2608
PaqCI	CACCTGC	1 cut(s)	2071
PciSI	GCTCTTC	2 cut(s)	474, 1832
PctI	GAATGC	5 cut(s)	370, 427, 529, 971, 2127
PdmI	GAANNNNTTC	2 cut(s)	1656, 1785
PflFI	GACNNNGTC	1 cut(s)	2244
PkrI	GCNGC	7 cut(s)	391, 574, 1561, 1894, 2668, 2922, 2925
Ple19I	CGATCG	1 cut(s)	1690
PleI	GAGTC	8 cut(s)	254, 895, 916, 1135, 1448, 1735, 2415, 2613
PpsI	GAGTC	8 cut(s)	254, 895, 916, 1135, 1448, 1735, 2415, 2613
Ppu21I	YACGTR	1 cut(s)	560
PsiI	TTATAA	1 cut(s)	1361
Psp124BI	GAGCTC	1 cut(s)	308
Psp1406I	AACGTT	2 cut(s)	874, 1870
Psp6I	CCWGG	3 cut(s)	20, 33, 62
PspGI	CCWGG	3 cut(s)	20, 33, 62
PspN4I	GGNNCC	6 cut(s)	294, 1346, 1572, 1709, 1971, 2469
PspOMI	GGGCCC	1 cut(s)	1707
PspPI	GGNCC	4 cut(s)	292, 1189, 1707, 1708
PstI	CTGCAG	1 cut(s)	186
PsyI	GACNNNGTC	1 cut(s)	2244
PvuI	CGATCG	1 cut(s)	1690
RseI	CAYNNNNRTG	2 cut(s)	1224, 1944
SacI	GAGCTC	1 cut(s)	308
SalI	GTCGAC	2 cut(s)	1018, 1743
SapI	GCTCTTC	2 cut(s)	474, 1832
SaqAI	TTAA	9 cut(s)	333, 614, 705, 1271, 2006, 2160, 2262, 2889, 3034
SatI	GCNGC	7 cut(s)	390, 573, 1560, 1893, 2667, 2921, 2924
Sau3AI	GATC	7 cut(s)	382, 1033, 1438, 1687, 2148, 2365, 2611
Sau96I	GGNCC	4 cut(s)	292, 1189, 1707, 1708
ScaI	AGTACT	1 cut(s)	1005
SchI	GAGTC	8 cut(s)	254, 896, 917, 1136, 1448, 1736, 2416, 2614
ScrFI	CCNGG	3 cut(s)	22, 35, 64
SduI	GDGCHC	3 cut(s)	308, 469, 1711
SexAI	ACCWGGT	1 cut(s)	20
SfcI	CTRYAG	2 cut(s)	182, 1722
SfuI	TTCGAA	2 cut(s)	1072, 2824
SinI	GGWCC	2 cut(s)	292, 1189
SmiMI	CAYNNNNRTG	2 cut(s)	1224, 1944
SmlI	CTYRAG	4 cut(s)	301, 576, 613, 1898
SmoI	CTYRAG	4 cut(s)	301, 576, 613, 1898
SphI	GCATGC	1 cut(s)	1470
SsiI	CCGC	6 cut(s)	5, 233, 425, 625, 656, 2920
SspI	AATATT	1 cut(s)	436
SspMI	CTAG	6 cut(s)	201, 1010, 1712, 2016, 2411, 2522
SstI	GAGCTC	1 cut(s)	308
StyD4I	CCNGG	3 cut(s)	20, 33, 62
StyI	CCWWGG	2 cut(s)	1331, 2050
TaaI	ACNGT	8 cut(s)	225, 1149, 1777, 2197, 2352, 2809, 2870, 2979
TaiI	ACGT	8 cut(s)	562, 853, 877, 1858, 1873, 2097, 2245, 2884
TaqI	TCGA	7 cut(s)	356, 1019, 1072, 1441, 1737, 1744, 2824
TaqII	GACCGA	1 cut(s)	271
TatI	WGTACW	6 cut(s)	173, 1003, 2347, 2352, 2482, 2557
TauI	GCSGC	1 cut(s)	2923
Tru1I	TTAA	9 cut(s)	333, 614, 705, 1271, 2006, 2160, 2262, 2889, 3034
Tru9I	TTAA	9 cut(s)	333, 614, 705, 1271, 2006, 2160, 2262, 2889, 3034
TscAI	CASTG	5 cut(s)	164, 1780, 2233, 2335, 2362
TseFI	GTSAC	5 cut(s)	786, 1495, 1697, 2188, 2199
TseI	GCWGC	6 cut(s)	389, 572, 1559, 1892, 2666, 2923
Tsp45I	GTSAC	5 cut(s)	786, 1495, 1697, 2188, 2199
TspGWI	ACGGA	3 cut(s)	857, 1459, 2992
TspRI	CASTG	5 cut(s)	164, 1780, 2233, 2335, 2362
Tth111I	GACNNNGTC	1 cut(s)	2244
Vha464I	CTTAAG	1 cut(s)	613
VpaK11BI	GGWCC	2 cut(s)	292, 1189
XapI	RAATTY	7 cut(s)	79, 637, 994, 1256, 1337, 2289, 2576
XceI	RCATGY	4 cut(s)	1330, 1470, 1547, 2501
XmiI	GTMKAC	2 cut(s)	1019, 1744
XmnI	GAANNNNTTC	2 cut(s)	1656, 1785
XspI	CTAG	6 cut(s)	201, 1010, 1712, 2016, 2411, 2522
ZrmI	AGTACT	1 cut(s)	1005
Zsp2I	ATGCAT	3 cut(s)	2317, 2338, 2456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.