Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007375

Physical Location & Seq

Genomic Coordinates Forward (+)

4950442 .. 4959204

Gene Structure 8763 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g08471.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3222 bp

ATGTTCGGGATTTTCAGACGAGGCAACGCCTCCGAAGCCTCGCCGGAATCTTCCTCCTCCCTGTCTTCTTCGTCGTCGCAATCACCTTCGCCTTCGCCGACGCAGCCGTCACGGTCGGTGACCGGGCCCGCGAGGCCGATTCGCCTCGTCTACGCCGACGAGAATGGGAGGTTCCGGATGGATCCGGAAGCCGTCGCGGTGCTGCAGCTCGTTAAGGAGCCGATTGGTGTCGTCTCCGTCTGCGGTCGCGCTCGCCAGGGCAAGAGCTATATTCTCAACCAGATCCTTGGAAGGAGTAGTGGATTTCAAGTAGCATCAACTCATCGTCCATGTACTAAAGGACTATGGATGTGGAGTGCACCCTTAAAGAGAACTGCCCTTGACGGAACTGAATACAATCTCTTATTGTTGGATACTGAAGGAATAGATGCTTATGATCAGACAGGAAAGTACAGCACACAAATATTTTCCTTGGCTGTTCTCTTATCCAGCATGTTCATTTACAATCAGATGGGTGGTATAGATGAAGCTTCACTTGATCGTCTCGCTCTTGTCACTCAAATGACCAAACATATTCGGGTTAAAGCCTCTGGGGGAAAAACCACAGCTTCTGAACTTGGGCAGTTCTCCCCAATTTTTGTCTGGCTTCTAAGGGACTTCTATCTTGAATTAGTAGAAGATGGTAGAAAGATAACACCACGTGAGTATCTAGAGATTGCGTTGAGGCCTTTTCAAGGAAAAAGAGATGTAGCTGCCCAAAATGAGATACGGGACTCCATCAGAGCTCTCTTTCCAGATAGAGAGTGCTTCACTCTTTTACGGCCTGTGGACAAGGAAGATGAGCTGCAGAGACTTGATAAAATTGATTTGAAGAAGTTAAGGCCTGAGTTTAGGGCAGGGTTGGATGCTTTAACAAGGTTTGTTTTCGAACGAACAAGGCCCAAGCAAGTTGGGGCTACTATGATGACAGGGCCGGTTCTAGTTGGTATCCTCCAGTCCTATCTTGATGCTCTTAATAATGGTGCAGTGCCTACCATTTCCTCTTCATGGCAGAGTGTTGAAGAAGCAGAGTGCCGAAGAGCATTTGATTCGGCTGTTGATGCCTATAGGTCTGCTTTTGACCGTTCAAAGTTGCCTGAAGAAGCTGCACTGAGGGAAGCTCATGAAGAGGCTGTCCAAAAATCACTGGCTGCTTTTAACGATTGTGCTGTAGGGGTCGGTCCAACTAGGAAAAAATACGAAGGGAATCTCCACAGACAGCTCAAAAAGGAATTTGAGGATTATAAGAAGAAGGCGTATATGGAGGCAGAGTTGCAATGTCTAAATGCTATACAAAGTATGGAAGGGAGGCTGAGAAGAGCTTGCCATGCTAGTGATGCTAATATTGATAATGTTTTGAAGGTTCTTGGTGACCTTATATCTGAGTATGAGAAGGCAAGTCGGGGTCCGCTAAAATGGCAGCAACTGGCTTCCTTTTTAAAAAAGAGTCTGGAAGGTCCAGTCCTTGATCTCATCAGGATGCAAATTCACAAAGTTGAATCAGAAAATGGCTCCTTGAGGTTGAGATGCCGTGCCATGGAAGGTGAGCTAGGTTTACTGAAAAAGGAGGTAGAGGCAAGCAAGCAGTCTAAGACAGAGTATCTCAAACGCTACGAGGACGCTCTCAATGACCAAAACAAGCTCCGTGAAGAATACATGGTTCGAATCAACAACTTGCAAGGAAATAGTACTTCTCTGCAAGATAAATGTGCTAGCTTGCGAAAGAGTTTGGATTCTGCAAAAGCAGAAGCAGTTGAATGGCAAAGAAAATACGAGCACCTTCTCTCCAAGCAGAAGGCGGAGGAATCTCAAGCTGGTTCTGAAATTGCGGTTCTCAAGTCCCGATGTAGTGCTGGTGAAGCAAGGCTGGCTGCTGCGAAGGAACAAGCTCAGTCTGCCCAAGAGGAGGCTGAGGACTGGAAACGCAAGTATGATATTGCTTTTCGAGAGGCAAAAGCTGCTCTGGAGAAGGCAGCAATTGTCCAAGAACGTTCCAGTAAGGAAACACAGAGGAGAGAAGATGCTTTAAGGGAAGAATTCTCAAGTAGTTTGGCTGAGAAGGAGGACGAGATAAAGGAAAAAACAGCAAAGATCGAATATGCTGAGCAGTGCTTAACGACTCTAAAGATGGAACTAAAGGCTGCCAGGTCCAAAATGGATAGTTATGATGCTGAAATATCATCAGGGAAGCTTGAAATCAAGGAGTTGAGTAAAAAATTAGAAGCTGCAAATGAAAAGGCCAATTCATTTGAAAGAGAAAAGAAGATTCTGGAACAGGAGAAGATCCATCTGAAGCAGACATATGAATCTGAGATCAAAAGATTGGATGAAGTCCAAGAAAGGTGTAAAGTTGCTGAAAAGGAGGCCACAAGAGCAACTGATATTGCCGATAGAGCACGAGCTCAAGCAGATATAGCTCAAAAGGAAAAGGGTGAGATGCAGAGGCTGGCAATAGAAAGGTTGGCTCAAATTGAGAGGGCTGAGAGGCATATTGAGAGTCTACAAAGGGAGAAAAGAGACTTGGAGGTTGAGTTGGATGGAATCCGTGCATCCGAGAGGGGAGCTCATCATAAAATTTCTCTACTGGAGGCAAGAGTTGAAGAAAGGGAGAAAGAAATAGAATCATTATTGGAGTCGAACAATGAGCAGAGAACTAGTACAGTTCAAGTCCTTCAAGGTCTTCTGGACAGTGAACGTGCAGCACATGCAGATGCAAATAATAGGGCGGAAGCCCTATCTCACCAGCTACAATCTGCACAAGCAAAGCTCGATAAACTCCAGCAAGAATTGACTACTGTTCGCCTGAATGAAACAGCGCTGGATAGTAAGCTTAGGACTGCTTCACATGGGAAACGTTCAAGGGTAGACGATTATGACATGGATGTGGACTCTGTTCAAGACGGGGAATTGAGTGACCGGATTTTAAGAGTAAATAAGAGGTCTAGAAGTACTACTAGCCCTCTGAAGCATGCACAAACAGAAGACGGTGGTTCAGTATTCAGGGGAGATGATGATAGCCGCAGTCAGCAAACCAATTCAGAAGACTACACAAAGTTCACAGTCCAGAAACTGAAGCAAGAGCTAACAAAGCATAATTTTGGTGCTGAGCTGCTTCAGCTAAGGAACCCCAACAAAAAGGAGATCCTCGCACTATATGAGAAGTGCATTGTTCAGAAGTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0002376 GO:0003674 GO:0005488 GO:0005515 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005794 GO:0005829 GO:0005856 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0008104 GO:0008150 GO:0009987 GO:0010033 GO:0012505 GO:0015629 GO:0017076 GO:0019001 GO:0019221 GO:0023052 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0033036 GO:0033365 GO:0034097 GO:0034340 GO:0034341 GO:0034504 GO:0034612 GO:0034613 GO:0035639 GO:0036094 GO:0042221 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046983 GO:0048471 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051641 GO:0051716 GO:0060333 GO:0060337 GO:0065007 GO:0070013 GO:0070555 GO:0070727 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071347 GO:0071356 GO:0071357 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04621 map04621

Pfam Domains

Protein Families

GBP GBP_C

Protein Analysis

1074

Amino Acids

121.32

Weight (kDa)

7.24

Isoelectric Point (pI)

54.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GBP	PF02263	56 - 312	5.2e-62	Guanylate-binding protein, N-terminal domain
GBP_C	PF02841	318 - 615	2.4e-31	Guanylate-binding protein, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46070
fragaria_vesca	FvH4_3g08471 FvH4_3g08471 FvH4_3g08471 FvH4_3g08471 FvH4_3g08471 FvH4_3g08471
malus_domestica	MD05G1309600.v1.1 MD10G1288200.v1.1
prunus_persica	Prupe.4G053400_v2.0.a1
pyrus_communis	pycom05g28600 pycom10g24130 pycom10g24140
rosa_chinensis	RchiOBHm_Chr5g0009341
rosa_laevigata	RLG00000031653
rosa_multiflora	Rmu_sc0002711.1_g000023 Rmu_sc0009480.1_g000002
rosa_roxburghii	Rroxscaffold_1G00066750 Rroxscaffold_1G00067450
rosa_rugosa	Rorug04G0441800
rosa_samantha	Rh5AG072700 Rh5BG069000 Rh5CG081600 Rh5DG069300
rosa_wichuraiana	Rw5G006790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1284
AasI	GACNNNNNNGTC	1 cut(s)	106
AccI	GTMKAC	3 cut(s)	150, 2539, 2904
AccII	CGCG	3 cut(s)	131, 197, 249
AccIII	TCCGGA	2 cut(s)	174, 184
AciI	CCGC	8 cut(s)	129, 197, 243, 1448, 1838, 1868, 2765, 3058
AclI	AACGTT	2 cut(s)	2029, 2893
AclWI	GGATC	5 cut(s)	176, 189, 277, 2317, 3175
AcsI	RAATTY	4 cut(s)	1271, 1524, 2075, 2613
AcuI	CTGAAG	6 cut(s)	438, 1158, 2351, 3023, 3131, 3137
AcvI	CACGTG	1 cut(s)	701
AdeI	CACNNNGTG	1 cut(s)	701
AfaI	GTAC	5 cut(s)	334, 452, 1729, 2698, 2989
AfeI	AGCGCT	1 cut(s)	2856
AfiI	CCNNNNNNNGG	4 cut(s)	734, 1047, 1576, 1945
AhlI	ACTAGT	1 cut(s)	2693
AjnI	CCWGG	2 cut(s)	255, 2183
AjuI	GAANNNNNNNTTGG	2 cut(s)	2543, 2575
Alw21I	GWGCWC	6 cut(s)	361, 787, 1818, 2437, 2443, 2605
Alw26I	GTCTC	4 cut(s)	238, 548, 844, 2550
Alw44I	GTGCAC	1 cut(s)	357
AlwI	GGATC	5 cut(s)	176, 189, 277, 2317, 3175
AlwNI	CAGNNNCTG	4 cut(s)	611, 1465, 2485, 3109
Aor13HI	TCCGGA	2 cut(s)	174, 184
Aor51HI	AGCGCT	1 cut(s)	2856
AoxI	GGCC	9 cut(s)	125, 134, 725, 821, 881, 938, 971, 2277, 2403
ApaI	GGGCCC	1 cut(s)	129
ApaLI	GTGCAC	1 cut(s)	357
ApoI	RAATTY	4 cut(s)	1271, 1524, 2075, 2613
AspLEI	GCGC	2 cut(s)	251, 2857
AspS9I	GGNCC	8 cut(s)	125, 126, 939, 971, 1220, 1445, 1496, 2187
AsuC2I	CCSGG	1 cut(s)	124
AsuHPI	GGTGA	7 cut(s)	75, 130, 1421, 1595, 1907, 2483, 2771
AsuII	TTCGAA	2 cut(s)	927, 1702
AsuNHI	GCTAGC	1 cut(s)	1751
AvaII	GGWCC	4 cut(s)	1220, 1445, 1496, 2187
BaeGI	GKGCMC	2 cut(s)	129, 361
BaeI	ACNNNNGTAYC	2 cut(s)	689, 722
BamHI	GGATCC	1 cut(s)	181
BanII	GRGCYC	4 cut(s)	129, 787, 2443, 2605
BauI	CACGAG	1 cut(s)	2436
BbrPI	CACGTG	1 cut(s)	701
BbsI	GAAGAC	4 cut(s)	57, 2711, 3027, 3087
Bbv12I	GWGCWC	6 cut(s)	361, 787, 1818, 2437, 2443, 2605
BbvCI	CCTCAGC	1 cut(s)	1950
BccI	CCATC	7 cut(s)	172, 505, 674, 785, 2161, 2334, 2570
BceAI	ACGGC	4 cut(s)	91, 176, 836, 1554
BcgI	CGANNNNNNTGC	2 cut(s)	1071, 1105
BciT130I	CCWGG	2 cut(s)	257, 2185
BciVI	GTATCC	2 cut(s)	406, 998
BclI	TGATCA	1 cut(s)	436
BcnI	CCSGG	1 cut(s)	124
BcoDI	GTCTC	4 cut(s)	238, 548, 844, 2550
BcuI	ACTAGT	1 cut(s)	2693
BfaI	CTAG	9 cut(s)	710, 980, 1227, 1371, 1589, 1752, 2694, 2982, 2994
BfmI	CTRYAG	4 cut(s)	203, 845, 1105, 1209
BfoI	RGCGCY	1 cut(s)	2858
BfuI	GTATCC	2 cut(s)	406, 998
BglI	GCCNNNNNGGC	1 cut(s)	133
BlpI	GCTNAGC	2 cut(s)	2142, 3144
BmcAI	AGTACT	2 cut(s)	1729, 2989
Bme1390I	CCNGG	3 cut(s)	124, 257, 2185
Bme18I	GGWCC	4 cut(s)	1220, 1445, 1496, 2187
BmgT120I	GGNCC	8 cut(s)	125, 126, 939, 971, 1220, 1445, 1496, 2187
BmiI	GGNNCC	7 cut(s)	127, 173, 183, 219, 1446, 1552, 3164
BmrFI	CCNGG	3 cut(s)	124, 257, 2185
BmtI	GCTAGC	1 cut(s)	1755
BpiI	GAAGAC	4 cut(s)	57, 2711, 3027, 3087
BplI	GAGNNNNNCTC	4 cut(s)	1144, 1176, 2587, 2619
BpmI	CTGGAG	4 cut(s)	977, 2024, 2645, 2801
Bpu10I	CCTNAGC	3 cut(s)	1950, 2870, 3158
Bpu1102I	GCTNAGC	2 cut(s)	2142, 3144
Bpu14I	TTCGAA	2 cut(s)	927, 1702
BpuEI	CTTGAG	5 cut(s)	1576, 1833, 1859, 2065, 2427
BpuMI	CCSGG	1 cut(s)	124
BsaAI	YACGTR	1 cut(s)	701
BsaJI	CCNNGG	4 cut(s)	256, 286, 471, 1575
BsaWI	WCCGGW	3 cut(s)	174, 184, 2955
BsaXI	ACNNNNNCTCC	6 cut(s)	1295, 1325, 1808, 1838, 2555, 2585
Bsc4I	CCNNNNNNNGG	4 cut(s)	734, 1047, 1576, 1945
Bse118I	RCCGGY	1 cut(s)	973
Bse1I	ACTGG	7 cut(s)	994, 1191, 1470, 1499, 1961, 2034, 2628
Bse3DI	GCAATG	1 cut(s)	1322
BseAI	TCCGGA	2 cut(s)	174, 184
BseBI	CCWGG	2 cut(s)	257, 2185
BseDI	CCNNGG	4 cut(s)	256, 286, 471, 1575
BseGI	GGATG	8 cut(s)	183, 354, 910, 1524, 2371, 2581, 2588, 2926
BseLI	CCNNNNNNNGG	4 cut(s)	734, 1047, 1576, 1945
BseMI	GCAATG	1 cut(s)	1322
BseNI	ACTGG	7 cut(s)	994, 1191, 1470, 1499, 1961, 2034, 2628
BseRI	GAGGAG	3 cut(s)	46, 1958, 2065
BseSI	GKGCMC	2 cut(s)	129, 361
BsgI	GTGCAG	4 cut(s)	1044, 1131, 2757, 2778
Bsh1236I	CGCG	3 cut(s)	131, 197, 249
Bsh1285I	CGRYCG	2 cut(s)	116, 247
BshFI	GGCC	9 cut(s)	127, 136, 727, 823, 883, 940, 973, 2279, 2405
BsiEI	CGRYCG	2 cut(s)	116, 247
BsiHKAI	GWGCWC	6 cut(s)	361, 787, 1818, 2437, 2443, 2605
BsiSI	CCGG	6 cut(s)	44, 123, 175, 185, 974, 2956
BslFI	GGGAC	3 cut(s)	668, 785, 1864
BslI	CCNNNNNNNGG	4 cut(s)	734, 1047, 1576, 1945
BsmAI	GTCTC	4 cut(s)	238, 548, 844, 2550
BsmBI	CGTCTC	2 cut(s)	238, 548
BsmFI	GGGAC	3 cut(s)	668, 785, 1864
BsnI	GGCC	9 cut(s)	127, 136, 727, 823, 883, 940, 973, 2279, 2405
Bsp119I	TTCGAA	2 cut(s)	927, 1702
Bsp120I	GGGCCC	1 cut(s)	125
Bsp1286I	GDGCHC	7 cut(s)	129, 361, 787, 1818, 2437, 2443, 2605
Bsp13I	TCCGGA	2 cut(s)	174, 184
Bsp143I	GATC	9 cut(s)	181, 282, 436, 538, 1507, 2130, 2322, 2352, 3180
Bsp1720I	GCTNAGC	2 cut(s)	2142, 3144
Bsp19I	CCATGG	1 cut(s)	1575
BspACI	CCGC	8 cut(s)	129, 197, 243, 1448, 1838, 1868, 2765, 3058
BspANI	GGCC	9 cut(s)	127, 136, 727, 823, 883, 940, 973, 2279, 2405
BspEI	TCCGGA	2 cut(s)	174, 184
BspFNI	CGCG	3 cut(s)	131, 197, 249
BspHI	TCATGA	1 cut(s)	1162
BspLI	GGNNCC	7 cut(s)	127, 173, 183, 219, 1446, 1552, 3164
BspMAI	CTGCAG	2 cut(s)	207, 849
BspOI	GCTAGC	1 cut(s)	1755
BspPI	GGATC	5 cut(s)	176, 189, 277, 2317, 3175
BspQI	GCTCTTC	2 cut(s)	1072, 1351
BspT104I	TTCGAA	2 cut(s)	927, 1702
BsrDI	GCAATG	1 cut(s)	1322
BsrFI	RCCGGY	1 cut(s)	973
BsrI	ACTGG	7 cut(s)	994, 1191, 1470, 1499, 1961, 2034, 2628
BssAI	RCCGGY	1 cut(s)	973
BssECI	CCNNGG	4 cut(s)	256, 286, 471, 1575
BssMI	GATC	9 cut(s)	181, 282, 436, 538, 1507, 2130, 2322, 2352, 3180
BssSI	CACGAG	1 cut(s)	2436
BssT1I	CCWWGG	3 cut(s)	286, 471, 1575
Bst2BI	CACGAG	1 cut(s)	2436
Bst2UI	CCWGG	2 cut(s)	257, 2185
Bst4CI	ACNGT	7 cut(s)	114, 1124, 2701, 2729, 2836, 3026, 3100
Bst6I	CTCTTC	4 cut(s)	1048, 1072, 1161, 1351
BstAPI	GCANNNNNTGC	2 cut(s)	1997, 2744
BstBAI	YACGTR	1 cut(s)	701
BstBI	TTCGAA	2 cut(s)	927, 1702
BstDSI	CCRYGG	1 cut(s)	1575
BstEII	GGTNACC	2 cut(s)	118, 1409
BstENI	CCTNNNNNAGG	1 cut(s)	732
BstF5I	GGATG	8 cut(s)	183, 354, 910, 1524, 2371, 2581, 2588, 2926
BstFNI	CGCG	3 cut(s)	131, 197, 249
BstH2I	RGCGCY	1 cut(s)	2858
BstHHI	GCGC	2 cut(s)	251, 2857
BstKTI	GATC	9 cut(s)	184, 285, 439, 541, 1510, 2133, 2325, 2355, 3183
BstMAI	GTCTC	4 cut(s)	238, 548, 844, 2550
BstMBI	GATC	9 cut(s)	181, 282, 436, 538, 1507, 2130, 2322, 2352, 3180
BstMCI	CGRYCG	2 cut(s)	116, 247
BstNI	CCWGG	2 cut(s)	257, 2185
BstNSI	RCATGY	3 cut(s)	496, 2747, 3011
BstPI	GGTNACC	2 cut(s)	118, 1409
BstSCI	CCNGG	3 cut(s)	122, 255, 2183
BstSFI	CTRYAG	4 cut(s)	203, 845, 1105, 1209
BstSLI	GKGCMC	2 cut(s)	129, 361
BstUI	CGCG	3 cut(s)	131, 197, 249
BstV2I	GAAGAC	4 cut(s)	57, 2711, 3027, 3087
BstX2I	RGATCY	4 cut(s)	181, 282, 2322, 3180
BstXI	CCANNNNNNTGG	1 cut(s)	287
BstYI	RGATCY	4 cut(s)	181, 282, 2322, 3180
BsuI	GTATCC	2 cut(s)	406, 998
BsuRI	GGCC	9 cut(s)	127, 136, 727, 823, 883, 940, 973, 2279, 2405
BtgI	CCRYGG	1 cut(s)	1575
BtsCI	GGATG	8 cut(s)	183, 354, 910, 1524, 2371, 2581, 2588, 2926
BtsI	GCAGTG	2 cut(s)	1032, 2153
BtsIMutI	CAGTG	5 cut(s)	1032, 1148, 1184, 2153, 2734
CaiI	CAGNNNCTG	4 cut(s)	611, 1465, 2485, 3109
CciI	TCATGA	1 cut(s)	1162
CfoI	GCGC	2 cut(s)	251, 2857
Cfr10I	RCCGGY	1 cut(s)	973
Cfr13I	GGNCC	8 cut(s)	125, 126, 939, 971, 1220, 1445, 1496, 2187
CseI	GACGC	2 cut(s)	109, 1667
Csp6I	GTAC	5 cut(s)	333, 451, 1728, 2697, 2988
CviQI	GTAC	5 cut(s)	333, 451, 1728, 2697, 2988
DpnI	GATC	9 cut(s)	183, 284, 438, 540, 1509, 2132, 2324, 2354, 3182
DpnII	GATC	9 cut(s)	181, 282, 436, 538, 1507, 2130, 2322, 2352, 3180
DraI	TTTAAA	1 cut(s)	1479
DraIII	CACNNNGTG	1 cut(s)	701
DrdI	GACNNNNNNGTC	1 cut(s)	106
DseDI	GACNNNNNNGTC	1 cut(s)	106
Eam1104I	CTCTTC	4 cut(s)	1048, 1072, 1161, 1351
EarI	CTCTTC	4 cut(s)	1048, 1072, 1161, 1351
EciI	GGCGGA	2 cut(s)	1853, 2780
Ecl136II	GAGCTC	3 cut(s)	785, 2441, 2603
Eco130I	CCWWGG	3 cut(s)	286, 471, 1575
Eco147I	AGGCCT	2 cut(s)	727, 883
Eco24I	GRGCYC	4 cut(s)	129, 787, 2443, 2605
Eco47I	GGWCC	4 cut(s)	1220, 1445, 1496, 2187
Eco47III	AGCGCT	1 cut(s)	2856
Eco53kI	GAGCTC	3 cut(s)	785, 2441, 2603
Eco57I	CTGAAG	6 cut(s)	438, 1158, 2351, 3023, 3131, 3137
Eco72I	CACGTG	1 cut(s)	701
Eco91I	GGTNACC	2 cut(s)	118, 1409
EcoICRI	GAGCTC	3 cut(s)	785, 2441, 2603
EcoNI	CCTNNNNNAGG	1 cut(s)	732
EcoO65I	GGTNACC	2 cut(s)	118, 1409
EcoRI	GAATTC	1 cut(s)	2075
EcoRII	CCWGG	2 cut(s)	255, 2183
EcoT14I	CCWWGG	3 cut(s)	286, 471, 1575
EcoT38I	GRGCYC	4 cut(s)	129, 787, 2443, 2605
ErhI	CCWWGG	3 cut(s)	286, 471, 1575
Esp3I	CGTCTC	2 cut(s)	238, 548
FalI	AAGNNNNNCTT	2 cut(s)	519, 551
FaqI	GGGAC	3 cut(s)	668, 785, 1864
FauI	CCCGC	1 cut(s)	136
FauNDI	CATATG	1 cut(s)	2341
FbaI	TGATCA	1 cut(s)	436
FblI	GTMKAC	3 cut(s)	150, 2539, 2904
FokI	GGATG	8 cut(s)	190, 361, 917, 1531, 2378, 2575, 2588, 2933
FriOI	GRGCYC	4 cut(s)	129, 787, 2443, 2605
FspBI	CTAG	9 cut(s)	710, 980, 1227, 1371, 1589, 1752, 2694, 2982, 2994
GlaI	GCGC	2 cut(s)	250, 2856
GsuI	CTGGAG	4 cut(s)	977, 2024, 2645, 2801
HaeII	RGCGCY	1 cut(s)	2858
HaeIII	GGCC	9 cut(s)	127, 136, 727, 823, 883, 940, 973, 2279, 2405
HapII	CCGG	6 cut(s)	44, 123, 175, 185, 974, 2956
HgaI	GACGC	2 cut(s)	109, 1667
HhaI	GCGC	2 cut(s)	251, 2857
Hin6I	GCGC	2 cut(s)	249, 2855
HinP1I	GCGC	2 cut(s)	249, 2855
HindIII	AAGCTT	3 cut(s)	528, 2228, 2867
HpaII	CCGG	6 cut(s)	44, 123, 175, 185, 974, 2956
HphI	GGTGA	7 cut(s)	75, 130, 1421, 1595, 1907, 2483, 2771
Hpy166II	GTNNAC	9 cut(s)	151, 359, 829, 1595, 2540, 2732, 2905, 2926, 3096
Hpy8I	GTNNAC	9 cut(s)	151, 359, 829, 1595, 2540, 2732, 2905, 2926, 3096
Hpy99I	CGWCG	5 cut(s)	76, 79, 103, 161, 197
HpyCH4III	ACNGT	7 cut(s)	114, 1124, 2701, 2729, 2836, 3026, 3100
HpyCH4IV	ACGT	4 cut(s)	700, 2029, 2734, 2893
HpySE526I	ACGT	4 cut(s)	700, 2029, 2734, 2893
HspAI	GCGC	2 cut(s)	249, 2855
Kpn2I	TCCGGA	2 cut(s)	174, 184
Ksp22I	TGATCA	1 cut(s)	436
Kzo9I	GATC	9 cut(s)	181, 282, 436, 538, 1507, 2130, 2322, 2352, 3180
LguI	GCTCTTC	2 cut(s)	1072, 1351
LmnI	GCTCC	4 cut(s)	217, 1556, 1686, 2600
MaeI	CTAG	9 cut(s)	710, 980, 1227, 1371, 1589, 1752, 2694, 2982, 2994
MaeII	ACGT	4 cut(s)	700, 2029, 2734, 2893
MaeIII	GTNAC	5 cut(s)	108, 118, 553, 1409, 2951
MalI	GATC	9 cut(s)	183, 284, 438, 540, 1509, 2132, 2324, 2354, 3182
MboI	GATC	9 cut(s)	181, 282, 436, 538, 1507, 2130, 2322, 2352, 3180
MfeI	CAATTG	1 cut(s)	2016
MflI	RGATCY	4 cut(s)	181, 282, 2322, 3180
MhlI	GDGCHC	7 cut(s)	129, 361, 787, 1818, 2437, 2443, 2605
MlyI	GAGTC	6 cut(s)	767, 1495, 2152, 2545, 2681, 2921
MmeI	TCCRAC	4 cut(s)	390, 882, 1247, 2553
MroI	TCCGGA	2 cut(s)	174, 184
MslI	CAYNNNNRTG	5 cut(s)	560, 1371, 1517, 2748, 2921
MspI	CCGG	6 cut(s)	44, 123, 175, 185, 974, 2956
MspR9I	CCNGG	3 cut(s)	124, 257, 2185
MunI	CAATTG	1 cut(s)	2016
MvaI	CCWGG	2 cut(s)	257, 2185
MvnI	CGCG	3 cut(s)	131, 197, 249
NciI	CCSGG	1 cut(s)	124
NcoI	CCATGG	1 cut(s)	1575
NdeI	CATATG	1 cut(s)	2341
NdeII	GATC	9 cut(s)	181, 282, 436, 538, 1507, 2130, 2322, 2352, 3180
NheI	GCTAGC	1 cut(s)	1751
NlaIV	GGNNCC	7 cut(s)	127, 173, 183, 219, 1446, 1552, 3164
NmuCI	GTSAC	5 cut(s)	108, 118, 553, 1409, 2951
NspI	RCATGY	3 cut(s)	496, 2747, 3011
NspV	TTCGAA	2 cut(s)	927, 1702
PaeI	GCATGC	1 cut(s)	3011
PagI	TCATGA	1 cut(s)	1162
PceI	AGGCCT	2 cut(s)	727, 883
PciSI	GCTCTTC	2 cut(s)	1072, 1351
PcsI	WCGNNNNNNNCGW	2 cut(s)	95, 153
PleI	GAGTC	6 cut(s)	767, 1494, 2152, 2544, 2680, 2921
PmaCI	CACGTG	1 cut(s)	701
PmlI	CACGTG	1 cut(s)	701
PpsI	GAGTC	6 cut(s)	767, 1494, 2152, 2544, 2680, 2921
Ppu21I	YACGTR	1 cut(s)	701
PsiI	TTATAA	1 cut(s)	1284
Psp124BI	GAGCTC	3 cut(s)	787, 2443, 2605
Psp1406I	AACGTT	2 cut(s)	2029, 2893
Psp6I	CCWGG	2 cut(s)	255, 2183
PspCI	CACGTG	1 cut(s)	701
PspEI	GGTNACC	2 cut(s)	118, 1409
PspGI	CCWGG	2 cut(s)	255, 2183
PspN4I	GGNNCC	7 cut(s)	127, 173, 183, 219, 1446, 1552, 3164
PspOMI	GGGCCC	1 cut(s)	125
PspPI	GGNCC	8 cut(s)	125, 126, 939, 971, 1220, 1445, 1496, 2187
PstI	CTGCAG	2 cut(s)	207, 849
PstNI	CAGNNNCTG	4 cut(s)	611, 1465, 2485, 3109
PsuI	RGATCY	4 cut(s)	181, 282, 2322, 3180
RsaI	GTAC	5 cut(s)	334, 452, 1729, 2698, 2989
RsaNI	GTAC	5 cut(s)	333, 451, 1728, 2697, 2988
RseI	CAYNNNNRTG	5 cut(s)	560, 1371, 1517, 2748, 2921
SacI	GAGCTC	3 cut(s)	787, 2443, 2605
SapI	GCTCTTC	2 cut(s)	1072, 1351
Sau3AI	GATC	9 cut(s)	181, 282, 436, 538, 1507, 2130, 2322, 2352, 3180
Sau96I	GGNCC	8 cut(s)	125, 126, 939, 971, 1220, 1445, 1496, 2187
ScaI	AGTACT	2 cut(s)	1729, 2989
SchI	GAGTC	6 cut(s)	767, 1495, 2152, 2545, 2681, 2921
ScrFI	CCNGG	3 cut(s)	124, 257, 2185
SduI	GDGCHC	7 cut(s)	129, 361, 787, 1818, 2437, 2443, 2605
SfcI	CTRYAG	4 cut(s)	203, 845, 1105, 1209
SfiI	GGCCNNNNNGGCC	1 cut(s)	133
SfuI	TTCGAA	2 cut(s)	927, 1702
SinI	GGWCC	4 cut(s)	1220, 1445, 1496, 2187
SmiMI	CAYNNNNRTG	5 cut(s)	560, 1371, 1517, 2748, 2921
SmlI	CTYRAG	5 cut(s)	1555, 1848, 1874, 2080, 2442
SmoI	CTYRAG	5 cut(s)	1555, 1848, 1874, 2080, 2442
SpeI	ACTAGT	1 cut(s)	2693
SphI	GCATGC	1 cut(s)	3011
SseBI	AGGCCT	2 cut(s)	727, 883
SsiI	CCGC	8 cut(s)	129, 197, 243, 1448, 1838, 1868, 2765, 3058
SspI	AATATT	2 cut(s)	465, 1384
SspMI	CTAG	9 cut(s)	710, 980, 1227, 1371, 1589, 1752, 2694, 2982, 2994
SstI	GAGCTC	3 cut(s)	787, 2443, 2605
StuI	AGGCCT	2 cut(s)	727, 883
StyD4I	CCNGG	3 cut(s)	122, 255, 2183
StyI	CCWWGG	3 cut(s)	286, 471, 1575
TaaI	ACNGT	7 cut(s)	114, 1124, 2701, 2729, 2836, 3026, 3100
TaiI	ACGT	4 cut(s)	703, 2032, 2737, 2896
TaqI	TCGA	6 cut(s)	927, 1702, 1984, 2133, 2675, 2808
TaqII	GACCGA	1 cut(s)	1208
TatI	WGTACW	5 cut(s)	332, 450, 1727, 2696, 2987
TauI	GCSGC	1 cut(s)	3060
TscAI	CASTG	5 cut(s)	1032, 1155, 1191, 2153, 2734
TseFI	GTSAC	5 cut(s)	108, 118, 553, 1409, 2951
Tsp45I	GTSAC	5 cut(s)	108, 118, 553, 1409, 2951
TspDTI	ATGAA	9 cut(s)	487, 540, 1035, 1179, 2274, 2286, 2358, 2382, 2862
TspGWI	ACGGA	4 cut(s)	226, 399, 1673, 2573
TspRI	CASTG	5 cut(s)	1032, 1155, 1191, 2153, 2734
VneI	GTGCAC	1 cut(s)	357
VpaK11BI	GGWCC	4 cut(s)	1220, 1445, 1496, 2187
XagI	CCTNNNNNAGG	1 cut(s)	732
XapI	RAATTY	4 cut(s)	1271, 1524, 2075, 2613
XbaI	TCTAGA	2 cut(s)	709, 2981
XceI	RCATGY	3 cut(s)	496, 2747, 3011
XcmI	CCANNNNNNNNNTGG	2 cut(s)	639, 2191
XmiI	GTMKAC	3 cut(s)	150, 2539, 2904
XspI	CTAG	9 cut(s)	710, 980, 1227, 1371, 1589, 1752, 2694, 2982, 2994
ZrmI	AGTACT	2 cut(s)	1729, 2989

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.