Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0007375

Physical Location & Seq

Genomic Coordinates Reverse (-)

7108187 .. 7114711

Gene Structure 6525 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031653

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3153 bp

ATGTTTCGCATGTTCAGAGGAGGCAACGCCTCCGATGCCTCGCCGGAATCCTCCTCCTCTCCGTCGTCGTCGTCCTCGCCTTCGCCGCCGCAGCCGTCGAGGCCGGTGACCGGGCCGGCGAGGCCGATTCGACTCGTCTACGCCGACGAGAAAGGGAGGTTCCGGATGGATCCGGAAGCCGTCGCGGTGTTGCAGCTCGTTAAGGAGCCGATTGGTGTCGTCTCGGTCTGCGGTCGCGCTCGCCAGGGCAAGAGCTATATTCTCAACCAGTGCCGAATAATTGATGTATATGGAGGTCATGGCTTGAAGCAGGTCGAAGGCCAAGATCTTGCATGTTGTTGGACTCTGTTGTGCCTTTTCTTTTGGTCTGAGCTCTGTGATGCCTTCACACAAATATTTTCCTTGGCTGTTCTCTTATCCAGCATGTTCATTTATAATCAGATGGGTGGTATAGATGAAGCTTCACTTGATCGTCTTGCTCTTGTCACCCAAGTGACCAAACATATCCGTGTTAAAGCCTCTGGAGGAAGAACCACAGCCTCTGAAATCGGGCAGTTCTCCCCAGTTTTTGTCTGGCTTCTAAGGGACTTCTATCTCGAATTAGTAGATAATGGTAGAAAGATAACACCCCGTGAGTATCTAGAGACTGCTTTGAGGCCTTTTGAAGGGAAAGAAGATGTAGCTGCCAAAAATGAGATACGGGACTCCATTAGAGCTCTGTTTCCAGATAGAGAATGCTTCACCCTTTTGCGGCCTGTGGACAAGGAAGAGGAGCTCCGGAGACTCGATCAAATTCAGTTGAACAAGTTAAGGCCTGAGTTTAAGTCAGGGCTGGATGCTTTGACAAGGTTTGTTTTTGAACGAACGAGGCCCAAGCAAGTTGGGGCCACTATGATGACAGGGCCAGTTCTAGTTGGTATCCTTCAGTCCTATCTTGATGCTCTTAATAATGGTGCAGTGCCTACCATCTCATCTTCATGGCAGAGTGTCGAAGAAGCAGAGTGCCGAAGAGCATATGATTCTGCTGTTGATGCTTATAGGTCTGCTTTTGACCGTTCAAAGTTGCCTGAAGAAGCTGCACTGAGGGAAGCTCATGAAGAGGCAGTCCAAAAATCACTGGCTGCTTTTAACGATTGTGCTGTAGGGGGTGGTCCAACAAGGAAAAAATATGAAGGGAATCTTCACAAACAGCTCAAAAAGGAATTTGAGGATTATAAGAAGAATGCATATATGGAGGCAGAGTTGCAATGTATAAATGCTATACAAAGGATGGAAGGGAAGCTGAGGAGCGCTTGCCATGCTAGTGATGCTAATATTCATAATGTTCTGAAGATTCTTGGTGAACTTATGTCCGACTATGAAAGGGCAAGTCGGGGTCCACTAAAATGGCAGCAACTGGCTTTCTTTTTAAGAAAGAGTTTGGAAGGTCCAATTCTTGATCTCATCATGAGGCAAATCAACAAAGTTGAATCACAGAATGGCACCTTGAGGTTGAGATCCCGTGCCATGGAAGATGAGTTGGGTTTACTGAAAAAGCGGGTAGAGGAAAGCAAGCAGTCTAAGATGGAGTACGTCAAACGCTACGAGGACGCTCTCAATGACAAGAACAAGCTACATGGTGAATACAATGTCCGTATTAACAACTTGCAAGGAAATAATACTTCTCTGCGAGATCAGTGTGCTAGCTTGCGTAAGAGTTTGGATTCTGTAAAAGCAGAAGCAGGAGAATGGCAAAGAAAATATGAGCAGGTTCTCTCCAAGCAGAAGGCTGAGGAAGATCAAGCTGGTTCTGAAATTGCGGTTCTCAAGTCTCGATGCAGTGCTGGTGAAGCAAGGCTGGCTGCTGCAAAGGAACAAGCTCAGTCTGCTCAAGAGGAGGCAGAGGACTGGAAGCGCAAATATGACATTGCTTTTAGAGAGGCAAAAGCTGCTCTAGAGAAGGCAGCAATTGTCCAAGAACGTTCCAGTAAGGAAACACAAAGGAGGGAAGATGCTTTGAGGGAAGAATACACAAGTAGTTTGGCTGCGAAGGAGGAAGACATAAAGGAAAAGACAGCAAAGATTGAATATGCTGAGCAGTGCTTAACGACTCTAAAAATGGAACTAAAGGCTGCCAGGTCCAAAATTGATAGTTATGATGCTGAAATATCATCAGGAAAGCTTGAAATCAAGGAGTTGAGTAGAAAATTAGAAGCTGCAAATGACAAGGCCAATTCATTTGAAAGAGAAAAGAAGATACTGGAGCAGGAGAAGATCCATCTAAAGCAGACATATGAAACTGAGATCAAAAGATTGGATGAAGTCCAAGAAAGGTGTAAAATTGCTGAAAAAGAAGCCACTAGAGCAACTGATATTGCTGATAAAGCACGAGCTCAAGCAGACATAGCTCAAAAGGAAAAGGGGGAGATGCAGAGGCTGGCAATAGAAAGGTTGGCTCAAATTGAGAGGGCTGAGAGGCATATTGAAAGTCTACAGAGGGAGAAAAGAGACTTGGAAGTTGAGTTGGACGGAATCCGTGCATCAGAAAGGGGAGCTCATCACAAAATTTCCCTACTGGAGGCAAGAGTTGAAGAAAGGGAGAAAGAAATAGAATCATTATTGGAGTCGAACAATGAGCAGAGAACTAGTACAGTTCAAGTCCTTCAAGGTCTTCTGGACAGTGAACGTGCAGCACATGCAGACGCAAACAATAGGGCAGAAGCCCTCTCTCATCAGCTACAATCTGCACAAGCAAAACTCGATAAACTCCAGCAAGAATTGACTTCTGTTCGCCTGAATGAAACTGCATTGGATAGTAAGCTTAGGACTGCTTCACATGGGAAGCGTTCAAGGGTAGATGACTATGACATGGACGTGGACTCTGTTCAAGACGGGGAATTGAGTGACCGGATCTTAAGAGTAAATAAGAAGTCTAGAAGTACTACTAGCCCTCTGAAGCATGCGCAAACAGAAGATGGTGGTTCAGTATTCCGGGGAGATGAGGATAGCCGCAGTCAGCAAACCAATCCAGAAGATTACACAAAGTTCACAGTCCAGAAACTGAAGCAAGAGCTCACAAAGCATAATTTTGGTGCTGAGCTGCTGCAGTTAAGGAACCCCAACAAAAGGGAGATCCTCACGCTATATGAGAAGTGCATTCTTCAAAAGTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0002376 GO:0003674 GO:0005488 GO:0005515 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005794 GO:0005829 GO:0005856 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0008104 GO:0008150 GO:0009987 GO:0010033 GO:0012505 GO:0015629 GO:0017076 GO:0019001 GO:0019221 GO:0023052 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0033036 GO:0033365 GO:0034097 GO:0034340 GO:0034341 GO:0034504 GO:0034612 GO:0034613 GO:0035639 GO:0036094 GO:0042221 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046983 GO:0048471 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051641 GO:0051716 GO:0060333 GO:0060337 GO:0065007 GO:0070013 GO:0070555 GO:0070727 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071347 GO:0071356 GO:0071357 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04621 map04621

Pfam Domains

Protein Families

GBP GBP_C

Protein Analysis

1051

Amino Acids

119.09

Weight (kDa)

7.0

Isoelectric Point (pI)

55.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GBP	PF02263	130 - 289	1e-35	Guanylate-binding protein, N-terminal domain
GBP_C	PF02841	295 - 594	3.9e-31	Guanylate-binding protein, C-terminal domain
Tropomyosin	PF00261	563 - 771	2.1e-06	Tropomyosin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0007375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46070
fragaria_vesca	FvH4_3g08471 FvH4_3g08471 FvH4_3g08471 FvH4_3g08471 FvH4_3g08471 FvH4_3g08471
malus_domestica	MD05G1309600.v1.1 MD10G1288200.v1.1
prunus_persica	Prupe.4G053400_v2.0.a1
pyrus_communis	pycom05g28600 pycom10g24130 pycom10g24140
rosa_chinensis	RchiOBHm_Chr5g0009341
rosa_laevigata	RLG00000031653
rosa_multiflora	Rmu_sc0002711.1_g000023 Rmu_sc0009480.1_g000002
rosa_roxburghii	Rroxscaffold_1G00066750 Rroxscaffold_1G00067450
rosa_rugosa	Rorug04G0441800
rosa_samantha	Rh5AG072700 Rh5BG069000 Rh5CG081600 Rh5DG069300
rosa_wichuraiana	Rw5G006790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	435, 1215
Acc16I	TGCGCA	1 cut(s)	2943
Acc36I	ACCTGC	2 cut(s)	301, 1738
AccB1I	GGYRCC	1 cut(s)	1481
AccI	GTMKAC	2 cut(s)	138, 2470
AccII	CGCG	2 cut(s)	185, 237
AccIII	TCCGGA	3 cut(s)	162, 172, 777
AciI	CCGC	8 cut(s)	86, 89, 185, 231, 751, 1537, 1799, 2989
AclI	AACGTT	1 cut(s)	1960
AclWI	GGATC	6 cut(s)	164, 177, 1491, 2248, 2897, 3106
AcsI	RAATTY	3 cut(s)	792, 1202, 2544
AcuI	CTGAAG	5 cut(s)	908, 1089, 1349, 2954, 3062
AdeI	CACNNNGTG	1 cut(s)	632
AfaI	GTAC	3 cut(s)	1571, 2629, 2920
AfeI	AGCGCT	1 cut(s)	1291
AfiI	CCNNNNNNNGG	6 cut(s)	110, 665, 750, 1507, 2557, 3105
AflII	CTTAAG	1 cut(s)	2893
AhlI	ACTAGT	1 cut(s)	2624
AjiI	CACGTC	1 cut(s)	2854
AjnI	CCWGG	2 cut(s)	243, 2114
AjuI	GAANNNNNNNTTGG	2 cut(s)	2474, 2506
AleI	CACNNNNGTG	1 cut(s)	491
Alw21I	GWGCWC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
Alw26I	GTCTC	5 cut(s)	226, 638, 775, 1815, 2481
AlwI	GGATC	6 cut(s)	164, 177, 1491, 2248, 2897, 3106
AlwNI	CAGNNNCTG	4 cut(s)	542, 1396, 2416, 3040
Aor13HI	TCCGGA	3 cut(s)	162, 172, 777
Aor51HI	AGCGCT	1 cut(s)	1291
ApoI	RAATTY	3 cut(s)	792, 1202, 2544
AspLEI	GCGC	4 cut(s)	239, 1292, 1896, 2944
AspS9I	GGNCC	8 cut(s)	113, 870, 885, 902, 1151, 1376, 1427, 2118
AsuC2I	CCSGG	2 cut(s)	112, 2972
AsuHPI	GGTGA	6 cut(s)	118, 478, 733, 1352, 1631, 1838
AsuNHI	GCTAGC	1 cut(s)	1682
AvaII	GGWCC	4 cut(s)	1151, 1376, 1427, 2118
BamHI	GGATCC	1 cut(s)	169
BanI	GGYRCC	1 cut(s)	1481
BanII	GRGCYC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
BauI	CACGAG	1 cut(s)	2367
BbsI	GAAGAC	2 cut(s)	2043, 2642
Bbv12I	GWGCWC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
BbvCI	CCTCAGC	2 cut(s)	1283, 1770
BccI	CCATC	7 cut(s)	160, 436, 974, 1264, 1558, 2265, 2948
BceAI	ACGGC	2 cut(s)	79, 164
BciT130I	CCWGG	2 cut(s)	245, 2116
BciVI	GTATCC	1 cut(s)	929
BcnI	CCSGG	2 cut(s)	112, 2972
BcoDI	GTCTC	5 cut(s)	226, 638, 775, 1815, 2481
BcuI	ACTAGT	1 cut(s)	2624
BfaI	CTAG	9 cut(s)	641, 911, 1302, 1683, 1934, 2340, 2625, 2913, 2925
BfmI	CTRYAG	3 cut(s)	1140, 2471, 3083
BfoI	RGCGCY	1 cut(s)	1293
BfrI	CTTAAG	1 cut(s)	2893
BfuAI	ACCTGC	2 cut(s)	301, 1738
BfuI	GTATCC	1 cut(s)	929
BglI	GCCNNNNNGGC	2 cut(s)	100, 121
BglII	AGATCT	1 cut(s)	325
BlpI	GCTNAGC	2 cut(s)	2073, 3075
BmcAI	AGTACT	1 cut(s)	2920
Bme1390I	CCNGG	4 cut(s)	112, 245, 2116, 2972
Bme18I	GGWCC	4 cut(s)	1151, 1376, 1427, 2118
BmgBI	CACGTC	1 cut(s)	2854
BmgT120I	GGNCC	8 cut(s)	113, 870, 885, 902, 1151, 1376, 1427, 2118
BmiI	GGNNCC	7 cut(s)	161, 171, 207, 886, 1377, 1483, 3095
BmrFI	CCNGG	4 cut(s)	112, 245, 2116, 2972
BmrI	ACTGGG	1 cut(s)	557
BmtI	GCTAGC	1 cut(s)	1686
BmuI	ACTGGG	1 cut(s)	557
BpiI	GAAGAC	2 cut(s)	2043, 2642
BplI	GAGNNNNNCTC	2 cut(s)	1075, 1107
BpmI	CTGGAG	4 cut(s)	543, 2261, 2576, 2732
Bpu10I	CCTNAGC	3 cut(s)	1283, 1770, 2801
Bpu1102I	GCTNAGC	2 cut(s)	2073, 3075
BpuEI	CTTGAG	4 cut(s)	1507, 1790, 1854, 2358
BpuMI	CCSGG	2 cut(s)	112, 2972
BsaJI	CCNNGG	4 cut(s)	244, 402, 1506, 2971
BsaWI	WCCGGW	4 cut(s)	162, 172, 777, 2886
BsaXI	ACNNNNNCTCC	2 cut(s)	1226, 1256
Bsc4I	CCNNNNNNNGG	6 cut(s)	110, 665, 750, 1507, 2557, 3105
Bse118I	RCCGGY	2 cut(s)	103, 115
Bse1I	ACTGG	9 cut(s)	268, 563, 905, 1122, 1401, 1892, 1965, 2244, 2559
Bse3DI	GCAATG	2 cut(s)	1253, 1905
BseAI	TCCGGA	3 cut(s)	162, 172, 777
BseBI	CCWGG	2 cut(s)	245, 2116
BseDI	CCNNGG	4 cut(s)	244, 402, 1506, 2971
BseGI	GGATG	4 cut(s)	171, 841, 1275, 2302
BseLI	CCNNNNNNNGG	6 cut(s)	110, 665, 750, 1507, 2557, 3105
BseMI	GCAATG	2 cut(s)	1253, 1905
BseNI	ACTGG	9 cut(s)	268, 563, 905, 1122, 1401, 1892, 1965, 2244, 2559
BseRI	GAGGAG	6 cut(s)	33, 43, 46, 785, 1300, 1889
BsgI	GTGCAG	4 cut(s)	975, 1062, 2688, 2709
Bsh1236I	CGCG	2 cut(s)	185, 237
Bsh1285I	CGRYCG	1 cut(s)	235
BshNI	GGYRCC	1 cut(s)	1481
BsiEI	CGRYCG	1 cut(s)	235
BsiHKAI	GWGCWC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
BsiSI	CCGG	9 cut(s)	44, 104, 111, 116, 163, 173, 778, 2887, 2971
BslFI	GGGAC	2 cut(s)	599, 716
BslI	CCNNNNNNNGG	6 cut(s)	110, 665, 750, 1507, 2557, 3105
BsmAI	GTCTC	5 cut(s)	226, 638, 775, 1815, 2481
BsmBI	CGTCTC	1 cut(s)	226
BsmFI	GGGAC	2 cut(s)	599, 716
BsmI	GAATGC	3 cut(s)	740, 1228, 3135
Bsp1286I	GDGCHC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
Bsp13I	TCCGGA	3 cut(s)	162, 172, 777
Bsp1720I	GCTNAGC	2 cut(s)	2073, 3075
Bsp19I	CCATGG	1 cut(s)	1506
BspACI	CCGC	8 cut(s)	86, 89, 185, 231, 751, 1537, 1799, 2989
BspEI	TCCGGA	3 cut(s)	162, 172, 777
BspFNI	CGCG	2 cut(s)	185, 237
BspHI	TCATGA	2 cut(s)	1093, 1446
BspLI	GGNNCC	7 cut(s)	161, 171, 207, 886, 1377, 1483, 3095
BspMAI	CTGCAG	1 cut(s)	3087
BspMI	ACCTGC	2 cut(s)	301, 1738
BspOI	GCTAGC	1 cut(s)	1686
BspPI	GGATC	6 cut(s)	164, 177, 1491, 2248, 2897, 3106
BspQI	GCTCTTC	1 cut(s)	1003
BspT107I	GGYRCC	1 cut(s)	1481
BspTI	CTTAAG	1 cut(s)	2893
BsrDI	GCAATG	2 cut(s)	1253, 1905
BsrFI	RCCGGY	2 cut(s)	103, 115
BsrI	ACTGG	9 cut(s)	268, 563, 905, 1122, 1401, 1892, 1965, 2244, 2559
BssAI	RCCGGY	2 cut(s)	103, 115
BssECI	CCNNGG	4 cut(s)	244, 402, 1506, 2971
BssSI	CACGAG	1 cut(s)	2367
BssT1I	CCWWGG	2 cut(s)	402, 1506
Bst2BI	CACGAG	1 cut(s)	2367
Bst2UI	CCWGG	2 cut(s)	245, 2116
Bst4CI	ACNGT	4 cut(s)	1055, 2632, 2660, 3031
Bst6I	CTCTTC	3 cut(s)	762, 1003, 1092
BstAFI	CTTAAG	1 cut(s)	2893
BstAPI	GCANNNNNTGC	2 cut(s)	1928, 2675
BstC8I	GCNNGC	9 cut(s)	117, 241, 1294, 1553, 1684, 1688, 1839, 2418, 2940
BstDSI	CCRYGG	1 cut(s)	1506
BstEII	GGTNACC	1 cut(s)	106
BstENI	CCTNNNNNAGG	2 cut(s)	663, 2555
BstF5I	GGATG	4 cut(s)	171, 841, 1275, 2302
BstFNI	CGCG	2 cut(s)	185, 237
BstH2I	RGCGCY	1 cut(s)	1293
BstHHI	GCGC	4 cut(s)	239, 1292, 1896, 2944
BstMAI	GTCTC	5 cut(s)	226, 638, 775, 1815, 2481
BstMCI	CGRYCG	1 cut(s)	235
BstNI	CCWGG	2 cut(s)	245, 2116
BstNSI	RCATGY	5 cut(s)	13, 336, 427, 2678, 2942
BstPI	GGTNACC	1 cut(s)	106
BstSCI	CCNGG	4 cut(s)	110, 243, 2114, 2970
BstSFI	CTRYAG	3 cut(s)	1140, 2471, 3083
BstUI	CGCG	2 cut(s)	185, 237
BstV2I	GAAGAC	2 cut(s)	2043, 2642
BstX2I	RGATCY	6 cut(s)	169, 325, 1496, 2253, 2889, 3111
BstXI	CCANNNNNNTGG	1 cut(s)	1386
BstYI	RGATCY	6 cut(s)	169, 325, 1496, 2253, 2889, 3111
BsuI	GTATCC	1 cut(s)	929
BtgI	CCRYGG	1 cut(s)	1506
BtrI	CACGTC	1 cut(s)	2854
BtsCI	GGATG	4 cut(s)	171, 841, 1275, 2302
BtsI	GCAGTG	3 cut(s)	963, 1825, 2084
BtsIMutI	CAGTG	8 cut(s)	275, 963, 1079, 1115, 1682, 1825, 2084, 2665
BveI	ACCTGC	2 cut(s)	301, 1738
Cac8I	GCNNGC	9 cut(s)	117, 241, 1294, 1553, 1684, 1688, 1839, 2418, 2940
CaiI	CAGNNNCTG	4 cut(s)	542, 1396, 2416, 3040
CciI	TCATGA	2 cut(s)	1093, 1446
CfoI	GCGC	4 cut(s)	239, 1292, 1896, 2944
Cfr10I	RCCGGY	2 cut(s)	103, 115
Cfr13I	GGNCC	8 cut(s)	113, 870, 885, 902, 1151, 1376, 1427, 2118
CseI	GACGC	2 cut(s)	1598, 2690
Csp6I	GTAC	3 cut(s)	1570, 2628, 2919
CviQI	GTAC	3 cut(s)	1570, 2628, 2919
DraIII	CACNNNGTG	1 cut(s)	632
Eam1104I	CTCTTC	3 cut(s)	762, 1003, 1092
EarI	CTCTTC	3 cut(s)	762, 1003, 1092
Ecl136II	GAGCTC	6 cut(s)	373, 716, 775, 2372, 2534, 3052
Eco130I	CCWWGG	2 cut(s)	402, 1506
Eco147I	AGGCCT	2 cut(s)	658, 814
Eco24I	GRGCYC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
Eco47I	GGWCC	4 cut(s)	1151, 1376, 1427, 2118
Eco47III	AGCGCT	1 cut(s)	1291
Eco53kI	GAGCTC	6 cut(s)	373, 716, 775, 2372, 2534, 3052
Eco57I	CTGAAG	5 cut(s)	908, 1089, 1349, 2954, 3062
Eco91I	GGTNACC	1 cut(s)	106
EcoICRI	GAGCTC	6 cut(s)	373, 716, 775, 2372, 2534, 3052
EcoNI	CCTNNNNNAGG	2 cut(s)	663, 2555
EcoO65I	GGTNACC	1 cut(s)	106
EcoRII	CCWGG	2 cut(s)	243, 2114
EcoT14I	CCWWGG	2 cut(s)	402, 1506
EcoT22I	ATGCAT	1 cut(s)	1228
EcoT38I	GRGCYC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
ErhI	CCWWGG	2 cut(s)	402, 1506
Esp3I	CGTCTC	1 cut(s)	226
FalI	AAGNNNNNCTT	4 cut(s)	450, 482, 1164, 1196
FaqI	GGGAC	2 cut(s)	599, 716
FauI	CCCGC	1 cut(s)	1530
FauNDI	CATATG	2 cut(s)	1015, 2272
FblI	GTMKAC	2 cut(s)	138, 2470
FokI	GGATG	4 cut(s)	178, 848, 1282, 2309
FriOI	GRGCYC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
FspBI	CTAG	9 cut(s)	641, 911, 1302, 1683, 1934, 2340, 2625, 2913, 2925
FspI	TGCGCA	1 cut(s)	2943
GlaI	GCGC	4 cut(s)	238, 1291, 1895, 2943
GsuI	CTGGAG	4 cut(s)	543, 2261, 2576, 2732
HaeII	RGCGCY	1 cut(s)	1293
HapII	CCGG	9 cut(s)	44, 104, 111, 116, 163, 173, 778, 2887, 2971
HgaI	GACGC	2 cut(s)	1598, 2690
HhaI	GCGC	4 cut(s)	239, 1292, 1896, 2944
Hin6I	GCGC	4 cut(s)	237, 1290, 1894, 2942
HinP1I	GCGC	4 cut(s)	237, 1290, 1894, 2942
HindIII	AAGCTT	3 cut(s)	459, 2159, 2798
HpaII	CCGG	9 cut(s)	44, 104, 111, 116, 163, 173, 778, 2887, 2971
HphI	GGTGA	6 cut(s)	118, 478, 733, 1352, 1631, 1838
Hpy166II	GTNNAC	9 cut(s)	139, 760, 1343, 1379, 1526, 2471, 2663, 2857, 3027
Hpy8I	GTNNAC	9 cut(s)	139, 760, 1343, 1379, 1526, 2471, 2663, 2857, 3027
Hpy99I	CGWCG	6 cut(s)	67, 70, 73, 100, 149, 185
HpyCH4III	ACNGT	4 cut(s)	1055, 2632, 2660, 3031
HpyCH4IV	ACGT	4 cut(s)	1572, 1960, 2665, 2853
HpySE526I	ACGT	4 cut(s)	1572, 1960, 2665, 2853
HspAI	GCGC	4 cut(s)	237, 1290, 1894, 2942
Kpn2I	TCCGGA	3 cut(s)	162, 172, 777
KroI	GCCGGC	1 cut(s)	115
KroNI	GCCGGC	1 cut(s)	117
LguI	GCTCTTC	1 cut(s)	1003
LmnI	GCTCC	6 cut(s)	205, 772, 780, 1287, 2242, 2531
MaeI	CTAG	9 cut(s)	641, 911, 1302, 1683, 1934, 2340, 2625, 2913, 2925
MaeII	ACGT	4 cut(s)	1572, 1960, 2665, 2853
MaeIII	GTNAC	4 cut(s)	106, 484, 493, 2882
MfeI	CAATTG	1 cut(s)	1947
MflI	RGATCY	6 cut(s)	169, 325, 1496, 2253, 2889, 3111
MhlI	GDGCHC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
MlyI	GAGTC	7 cut(s)	126, 337, 698, 777, 2083, 2612, 2852
MmeI	TCCRAC	4 cut(s)	320, 1178, 1377, 2484
Mph1103I	ATGCAT	1 cut(s)	1228
MroI	TCCGGA	3 cut(s)	162, 172, 777
MroNI	GCCGGC	1 cut(s)	115
MslI	CAYNNNNRTG	7 cut(s)	491, 507, 893, 976, 1302, 1384, 2852
MspCI	CTTAAG	1 cut(s)	2893
MspI	CCGG	9 cut(s)	44, 104, 111, 116, 163, 173, 778, 2887, 2971
MspR9I	CCNGG	4 cut(s)	112, 245, 2116, 2972
MunI	CAATTG	1 cut(s)	1947
Mva1269I	GAATGC	3 cut(s)	740, 1228, 3135
MvaI	CCWGG	2 cut(s)	245, 2116
MvnI	CGCG	2 cut(s)	185, 237
NaeI	GCCGGC	1 cut(s)	117
NciI	CCSGG	2 cut(s)	112, 2972
NcoI	CCATGG	1 cut(s)	1506
NdeI	CATATG	2 cut(s)	1015, 2272
NgoMIV	GCCGGC	1 cut(s)	115
NheI	GCTAGC	1 cut(s)	1682
NlaIV	GGNNCC	7 cut(s)	161, 171, 207, 886, 1377, 1483, 3095
NmuCI	GTSAC	4 cut(s)	106, 484, 493, 2882
NsbI	TGCGCA	1 cut(s)	2943
NsiI	ATGCAT	1 cut(s)	1228
NspI	RCATGY	5 cut(s)	13, 336, 427, 2678, 2942
OliI	CACNNNNGTG	1 cut(s)	491
PaeI	GCATGC	1 cut(s)	2942
PagI	TCATGA	2 cut(s)	1093, 1446
PceI	AGGCCT	2 cut(s)	658, 814
PciSI	GCTCTTC	1 cut(s)	1003
PcsI	WCGNNNNNNNCGW	1 cut(s)	141
PctI	GAATGC	3 cut(s)	740, 1228, 3135
PdiI	GCCGGC	1 cut(s)	117
PfeI	GAWTC	9 cut(s)	47, 127, 1019, 1177, 1333, 1469, 1703, 2511, 2591
PleI	GAGTC	7 cut(s)	126, 337, 698, 777, 2083, 2611, 2852
PpsI	GAGTC	7 cut(s)	126, 337, 698, 777, 2083, 2611, 2852
PsiI	TTATAA	2 cut(s)	435, 1215
Psp124BI	GAGCTC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
Psp1406I	AACGTT	1 cut(s)	1960
Psp6I	CCWGG	2 cut(s)	243, 2114
PspEI	GGTNACC	1 cut(s)	106
PspGI	CCWGG	2 cut(s)	243, 2114
PspN4I	GGNNCC	7 cut(s)	161, 171, 207, 886, 1377, 1483, 3095
PspPI	GGNCC	8 cut(s)	113, 870, 885, 902, 1151, 1376, 1427, 2118
PstI	CTGCAG	1 cut(s)	3087
PstNI	CAGNNNCTG	4 cut(s)	542, 1396, 2416, 3040
PsuI	RGATCY	6 cut(s)	169, 325, 1496, 2253, 2889, 3111
RsaI	GTAC	3 cut(s)	1571, 2629, 2920
RsaNI	GTAC	3 cut(s)	1570, 2628, 2919
RseI	CAYNNNNRTG	7 cut(s)	491, 507, 893, 976, 1302, 1384, 2852
SacI	GAGCTC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
SapI	GCTCTTC	1 cut(s)	1003
Sau96I	GGNCC	8 cut(s)	113, 870, 885, 902, 1151, 1376, 1427, 2118
ScaI	AGTACT	1 cut(s)	2920
SchI	GAGTC	7 cut(s)	126, 337, 698, 777, 2083, 2612, 2852
ScrFI	CCNGG	4 cut(s)	112, 245, 2116, 2972
SduI	GDGCHC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
SfcI	CTRYAG	3 cut(s)	1140, 2471, 3083
SfiI	GGCCNNNNNGGCC	1 cut(s)	121
SinI	GGWCC	4 cut(s)	1151, 1376, 1427, 2118
SmiMI	CAYNNNNRTG	7 cut(s)	491, 507, 893, 976, 1302, 1384, 2852
SmlI	CTYRAG	5 cut(s)	1486, 1805, 1869, 2373, 2893
SmoI	CTYRAG	5 cut(s)	1486, 1805, 1869, 2373, 2893
SpeI	ACTAGT	1 cut(s)	2624
SphI	GCATGC	1 cut(s)	2942
SseBI	AGGCCT	2 cut(s)	658, 814
SsiI	CCGC	8 cut(s)	86, 89, 185, 231, 751, 1537, 1799, 2989
SspI	AATATT	2 cut(s)	396, 1315
SspMI	CTAG	9 cut(s)	641, 911, 1302, 1683, 1934, 2340, 2625, 2913, 2925
SstI	GAGCTC	6 cut(s)	375, 718, 777, 2374, 2536, 3054
StuI	AGGCCT	2 cut(s)	658, 814
StyD4I	CCNGG	4 cut(s)	110, 243, 2114, 2970
StyI	CCWWGG	2 cut(s)	402, 1506
TaaI	ACNGT	4 cut(s)	1055, 2632, 2660, 3031
TaiI	ACGT	4 cut(s)	1575, 1963, 2668, 2856
TaqI	TCGA	9 cut(s)	98, 130, 315, 597, 786, 990, 1813, 2606, 2739
TaqII	GACCGA	1 cut(s)	214
TatI	WGTACW	2 cut(s)	2627, 2918
TauI	GCSGC	4 cut(s)	88, 91, 754, 2991
TfiI	GAWTC	9 cut(s)	47, 127, 1019, 1177, 1333, 1469, 1703, 2511, 2591
TscAI	CASTG	8 cut(s)	275, 963, 1086, 1122, 1682, 1825, 2084, 2665
TseFI	GTSAC	4 cut(s)	106, 484, 493, 2882
Tsp45I	GTSAC	4 cut(s)	106, 484, 493, 2882
TspGWI	ACGGA	5 cut(s)	51, 497, 1622, 2504, 2523
TspRI	CASTG	8 cut(s)	275, 963, 1086, 1122, 1682, 1825, 2084, 2665
Vha464I	CTTAAG	1 cut(s)	2893
VpaK11BI	GGWCC	4 cut(s)	1151, 1376, 1427, 2118
XagI	CCTNNNNNAGG	2 cut(s)	663, 2555
XapI	RAATTY	3 cut(s)	792, 1202, 2544
XbaI	TCTAGA	3 cut(s)	640, 1933, 2912
XceI	RCATGY	5 cut(s)	13, 336, 427, 2678, 2942
XcmI	CCANNNNNNNNNTGG	1 cut(s)	570
XmiI	GTMKAC	2 cut(s)	138, 2470
XspI	CTAG	9 cut(s)	641, 911, 1302, 1683, 1934, 2340, 2625, 2913, 2925
ZrmI	AGTACT	1 cut(s)	2920
Zsp2I	ATGCAT	1 cut(s)	1228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.