Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0007375

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG069000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3207 bp

ATGTTTCGGATGTTCAGAGGAGGCAACGCCTCCGATGCCTCGCCGGAATCTTCCTCCTCTCCGTCGTCGTCGTCCTCGCCTTCGCCGCCGCAGCCGTCGCGGCCGGTGACCGGGCCGGCGAGGCCAATTCGACTCGTCTACGCCGACGAGAAAGGGAGGTTCCGGATGGATCCGGAAGCCGTCGCGGTGTTGCAGCTCGTTAAGGAGCCGATTGGTGTCGTCTCCGTCTGCGGTCGCGCTCGCCAGGGCAAGAGCTATATTCTCAACCAGATTCTTGGAAGGAGCAGTGGATTTCAAGTAGCATCGACTCATCGCCCATGTACTAAAGGACTATGGATGTGGAGTGCACCCTTGAAGAGAACTGCCCTTGATGGAACTGAATACAATCTCTTATTGTTGGATTCTGAAGGAATAGATGCTTATGATCAGACAGGAACGTACAGCACACAAATATTTTCCTTGGCTGTTCTCTTATCCAGCATGTTCATTTATAATCAGATGGGTGGTATAGATGAAGCTTCACTTGATCGTCTTGCTCTTGTCACCCAAGTGACCAAACATATCCGTGTTAAAGCCTCTGGAGGAAGAACCACAGCCTCTGAAATTGGGCAGTTCTCCCCAGTTTTTGTCTGGCTTCTAAGGGACTTCTATCTCGACTTAGTAGAGGATGGTAGAAAGATAACACCCCGTGAGTATCTAGAGACTGCTTTGAGGCCTTTTGAAGGAAAACAAGACGTAGCTGCCAAAAATGAGATACGGGACTCCATTAGAGCTCTATTTCCAGATAGAGAATGCTTCACCCTTTTGCGGCCTGTGGACAAGGAAGAGGAGCTCCGGAGACTCGATCAAATTCAGTTGAACAAGTTAAGGCCTGAGTTTAGGTCAGGGCTGGATGCTTTGACAAGTTTTGTTTTTAAACGAACGAGGCCCAAGCAAGTTGGGGCCACTATGATGACAGGGCCAGTTCTAGTTGGTATCCTTCAGTCCTATCTTGATGCTCTTAATAATGGTGCAGTGCCTACCATCTCATCTTCATGGCAGAGTGTCGAAGAAGCAGAGTGCCGAAGAGCATATGATTCTGCTGTTGATGCTTATAGGTCTGCTTTTGACCGTTCAAAGTTGCCTGAAGAAGCTGCACTGAGGGAGGCTCATGAAGAGGCAGTCCAAAAATCACTGGCTGCTTTTAATGATTGTGCTGTAGGGGGTGGTCCAACAAGGAAAAAATATGAAGGAAATCTTCACAAACAGCTCAAAAAGGAATTTGAGGATTATAAGAAGAATGCATATATGGAGGCAGAGTTGCAATGTGTAAATGCTATACAAAGGATGGAAGGGAAGCTGAGGAGCGCTTGCCATGCTAGTGATGCTAATATTGATAATGTTCTGAAGGTTCTTGGTGACCTTATGTCCGAGTATGAAAGGGCAACTCGGGGTCCACTAAAATGGCAGCAACTGGCTTTTTTTTTAAGAAAGAGTTTGGAAGGTCCAATTCTTGATCTCATCATGAGGCAAATCAACAAAGTTGAATCACAGAATGGCACCTTGAGGTTGAGATCCCGTGCCATGGAAGATGAGTTGGGTTTACTGAAAAAGCGGGTAGAGGAAAGCAAGCAGTCTAAGATGGAGTACGTCAAACGCTACGAGGATGCTCTCAATGACAAGAACAAGCTAAATGATGAATACAATGTCCGTTTTAACAACTTGCAAGGAAATAATACTTCTCTGCGAGATAAGTGTGCTAGCTTGCGTAAGAGTTTGGATTCTGTAAAAGCAGAAGCAGGAGAATGGCAAAGAAAATATGAGCAGGTTCTCTCCAAGCAGAAGGCTGAGGAAGATCAAGCTGGTTCTGAAATTGCGGTTCTCAAGTCTCGATGCAGTGCTGGTGAAGCAAGGCTGGCTGCTGCAAAGGAACAAGCTCAGTCTGCTCAAGAGGAGGCAGAGGACTGGAAACGCAAATATGACATTGCTTTTAGAGAGGCAAAAGCTGCTCTAGAGAAGGCAGCAATTGTCCAAGAACGTTCCAGTAAGGAAACACAAAGGAGAGAAGATGCTTTGAGGGAAGAATTCACAAGTAGTTTGGTTGCGAAGGAGGAAGACATAAAGGAAAAGACAGCAAAGATTGAATATGCTGAGCAGTGCTTAACGACTCTAAAAATGGAACTAAAGGCTGCCAGGTCCAAAATTGATAGTTACGATGCTGAAATATCATCAGGAAAGCTTGAAATCAAGGAGCTGAGTAGAAAATTAGAAGCTGCAAATGACAAGGCCAATTCATTTGAAAGAGAAAAGAAGATACTGGAGCAGGAGAAGATCCATCTAAAGCAGACATATGAAACTGAGATCAAAAGATTGGATGAAGTCCAAGAAAGGTGTAAAATTGCTGAAAAAGAAGCCACTAGAGCAACTGATATTGCTGATAAAGCACGAGCTCAAGCAGACATAGCTCAAAAGGAAAAGGGGGAGATGCAGAGGCTGGCAATAGAAAGGTTGGCTCAAATTGAGAGGGCTGAGAGGCATATTGAAAGTCTACAGAGGGAGAAAAGAGACTTGGAAGTTGAGTTGGACGGAATCCGTGCATCAGAAAGGGGAGCTCATCACAAAATTTCTCTGCTGGAGGCAAGAGTTGAAGAAAGGGAGAAAGAAATAGAATCATTATTGGAGTCGAACAATGAGCAGAGAACTAGTACAGTTCAAGTCCTTCAAGGTCTTCTGGACAGTGAACGTGCAGCACATGCAGACGCAAACAATAGGGCAGAAGCCCTCTCTCATCAGCTACAATCTGCACAAGCAAAACTCGATAAACTCCAGCAAGAATTGACTTCTGTTCGCCTGAATGAAACTGCATTGGATAGTAAGCTTAGGACTGCTTCACATGGGAAGCGTTCAAGGGTAGATGACTATGACATGGACGTGGACTCTGTTCAAGACGGGGAATTGAGTGACCGGATCGTAAGAGTAAATAAGAAGTCTAGGAGTACTACTAGCCCTCTGAAGCATGCTCAAACAGAAGATGGTTCAGTATTCCGGGGAGATGAGGATAGCCGCAGTCAGCAAACCAATCCAGAAGATTACACAAAGTTCACAGTCCAGAAACTGAAGCAAGAGCTAACAAAGCATAATTTTGGTGCTGAGCTGCTGCAGTTAAGGAACCCCAACAAAAGGGAGATCCTCACACTATATGAGAAGTGCATTCTTCAAAAGTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0002376 GO:0003674 GO:0005488 GO:0005515 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005794 GO:0005829 GO:0005856 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0008104 GO:0008150 GO:0009987 GO:0010033 GO:0012505 GO:0015629 GO:0017076 GO:0019001 GO:0019221 GO:0023052 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0033036 GO:0033365 GO:0034097 GO:0034340 GO:0034341 GO:0034504 GO:0034612 GO:0034613 GO:0035639 GO:0036094 GO:0042221 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046983 GO:0048471 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051641 GO:0051716 GO:0060333 GO:0060337 GO:0065007 GO:0070013 GO:0070555 GO:0070727 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071347 GO:0071356 GO:0071357 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04621 map04621

Pfam Domains

Protein Families

GBP GBP_C

Protein Analysis

1068

Amino Acids

120.96

Weight (kDa)

7.51

Isoelectric Point (pI)

56.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GBP	PF02263	52 - 309	5.3e-62	Guanylate-binding protein, N-terminal domain
GBP_C	PF02841	314 - 647	3.3e-31	Guanylate-binding protein, C-terminal domain
Tropomyosin	PF00261	582 - 790	6.7e-07	Tropomyosin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46070
fragaria_vesca	FvH4_3g08471 FvH4_3g08471 FvH4_3g08471 FvH4_3g08471 FvH4_3g08471 FvH4_3g08471
malus_domestica	MD05G1309600.v1.1 MD10G1288200.v1.1
prunus_persica	Prupe.4G053400_v2.0.a1
pyrus_communis	pycom05g28600 pycom10g24130 pycom10g24140
rosa_chinensis	RchiOBHm_Chr5g0009341
rosa_laevigata	RLG00000031653
rosa_multiflora	Rmu_sc0002711.1_g000023 Rmu_sc0009480.1_g000002
rosa_roxburghii	Rroxscaffold_1G00066750 Rroxscaffold_1G00067450
rosa_rugosa	Rorug04G0441800
rosa_samantha	Rh5AG072700 Rh5BG069000 Rh5CG081600 Rh5DG069300
rosa_wichuraiana	Rw5G006790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	492, 1272
Acc36I	ACCTGC	1 cut(s)	1795
AccB1I	GGYRCC	1 cut(s)	1538
AccI	GTMKAC	2 cut(s)	138, 2527
AccII	CGCG	3 cut(s)	100, 185, 237
AccIII	TCCGGA	3 cut(s)	162, 172, 834
AciI	CCGC	9 cut(s)	86, 89, 100, 185, 231, 808, 1594, 1856, 3043
AclI	AACGTT	1 cut(s)	2017
AclWI	GGATC	6 cut(s)	164, 177, 1548, 2305, 2954, 3160
AcoI	YGGCCR	1 cut(s)	101
AcsI	RAATTY	4 cut(s)	849, 1259, 2063, 2601
AcuI	CTGAAG	6 cut(s)	426, 965, 1146, 1406, 3011, 3116
AdeI	CACNNNGTG	1 cut(s)	689
AfaI	GTAC	5 cut(s)	322, 440, 1628, 2686, 2977
AfeI	AGCGCT	1 cut(s)	1348
AfiI	CCNNNNNNNGG	5 cut(s)	110, 722, 807, 1564, 3159
AhdI	GACNNNNNGTC	1 cut(s)	1405
AhlI	ACTAGT	1 cut(s)	2681
AjiI	CACGTC	1 cut(s)	2911
AjnI	CCWGG	2 cut(s)	243, 2171
AjuI	GAANNNNNNNTTGG	2 cut(s)	2531, 2563
AleI	CACNNNNGTG	1 cut(s)	548
Alw21I	GWGCWC	5 cut(s)	349, 775, 834, 2431, 2593
Alw26I	GTCTC	5 cut(s)	226, 695, 832, 1872, 2538
Alw44I	GTGCAC	1 cut(s)	345
AlwI	GGATC	6 cut(s)	164, 177, 1548, 2305, 2954, 3160
AlwNI	CAGNNNCTG	4 cut(s)	599, 1453, 2473, 3094
Ama87I	CYCGRG	1 cut(s)	1428
Aor13HI	TCCGGA	3 cut(s)	162, 172, 834
Aor51HI	AGCGCT	1 cut(s)	1348
ApaLI	GTGCAC	1 cut(s)	345
ApoI	RAATTY	4 cut(s)	849, 1259, 2063, 2601
AspLEI	GCGC	2 cut(s)	239, 1349
AspS9I	GGNCC	8 cut(s)	113, 927, 942, 959, 1208, 1433, 1484, 2175
AsuC2I	CCSGG	2 cut(s)	112, 3026
AsuHPI	GGTGA	5 cut(s)	118, 535, 790, 1409, 1895
AsuNHI	GCTAGC	1 cut(s)	1739
AvaI	CYCGRG	1 cut(s)	1428
AvaII	GGWCC	4 cut(s)	1208, 1433, 1484, 2175
BaeGI	GKGCMC	1 cut(s)	349
BamHI	GGATCC	1 cut(s)	169
BanI	GGYRCC	1 cut(s)	1538
BanII	GRGCYC	4 cut(s)	775, 834, 2431, 2593
BauI	CACGAG	1 cut(s)	2424
BbsI	GAAGAC	2 cut(s)	2100, 2699
Bbv12I	GWGCWC	5 cut(s)	349, 775, 834, 2431, 2593
BbvCI	CCTCAGC	2 cut(s)	1340, 1827
BccI	CCATC	9 cut(s)	160, 365, 493, 662, 1031, 1321, 1615, 2322, 3005
BceAI	ACGGC	2 cut(s)	79, 164
BciT130I	CCWGG	2 cut(s)	245, 2173
BciVI	GTATCC	1 cut(s)	986
BclI	TGATCA	1 cut(s)	424
BcnI	CCSGG	2 cut(s)	112, 3026
BcoDI	GTCTC	5 cut(s)	226, 695, 832, 1872, 2538
BcuI	ACTAGT	1 cut(s)	2681
BfaI	CTAG	9 cut(s)	698, 968, 1359, 1740, 1991, 2397, 2682, 2970, 2982
BfmI	CTRYAG	3 cut(s)	1197, 2528, 3137
BfoI	RGCGCY	1 cut(s)	1350
BfuAI	ACCTGC	1 cut(s)	1795
BfuI	GTATCC	1 cut(s)	986
BglI	GCCNNNNNGGC	2 cut(s)	100, 121
BlpI	GCTNAGC	2 cut(s)	2130, 3129
BmcAI	AGTACT	1 cut(s)	2977
Bme1390I	CCNGG	4 cut(s)	112, 245, 2173, 3026
Bme18I	GGWCC	4 cut(s)	1208, 1433, 1484, 2175
BmeRI	GACNNNNNGTC	1 cut(s)	1405
BmeT110I	CYCGRG	1 cut(s)	1428
BmgBI	CACGTC	1 cut(s)	2911
BmgT120I	GGNCC	8 cut(s)	113, 927, 942, 959, 1208, 1433, 1484, 2175
BmiI	GGNNCC	7 cut(s)	161, 171, 207, 943, 1434, 1540, 3149
BmrFI	CCNGG	4 cut(s)	112, 245, 2173, 3026
BmrI	ACTGGG	1 cut(s)	614
BmtI	GCTAGC	1 cut(s)	1743
BmuI	ACTGGG	1 cut(s)	614
BpiI	GAAGAC	2 cut(s)	2100, 2699
BplI	GAGNNNNNCTC	2 cut(s)	1132, 1164
BpmI	CTGGAG	4 cut(s)	600, 2318, 2633, 2789
Bpu10I	CCTNAGC	3 cut(s)	1340, 1827, 2858
Bpu1102I	GCTNAGC	2 cut(s)	2130, 3129
BpuEI	CTTGAG	4 cut(s)	1564, 1847, 1911, 2415
BpuMI	CCSGG	2 cut(s)	112, 3026
BsaJI	CCNNGG	4 cut(s)	244, 459, 1563, 3025
BsaWI	WCCGGW	4 cut(s)	162, 172, 834, 2943
BsaXI	ACNNNNNCTCC	2 cut(s)	1283, 1313
Bsc4I	CCNNNNNNNGG	5 cut(s)	110, 722, 807, 1564, 3159
Bse118I	RCCGGY	2 cut(s)	103, 115
Bse1I	ACTGG	7 cut(s)	620, 962, 1179, 1458, 1949, 2022, 2301
Bse3DI	GCAATG	2 cut(s)	1310, 1962
BseAI	TCCGGA	3 cut(s)	162, 172, 834
BseBI	CCWGG	2 cut(s)	245, 2173
BseDI	CCNNGG	4 cut(s)	244, 459, 1563, 3025
BseGI	GGATG	8 cut(s)	15, 171, 342, 673, 898, 1332, 1651, 2359
BseLI	CCNNNNNNNGG	5 cut(s)	110, 722, 807, 1564, 3159
BseMI	GCAATG	2 cut(s)	1310, 1962
BseNI	ACTGG	7 cut(s)	620, 962, 1179, 1458, 1949, 2022, 2301
BseRI	GAGGAG	5 cut(s)	33, 46, 842, 1357, 1946
BseSI	GKGCMC	1 cut(s)	349
BseX3I	CGGCCG	1 cut(s)	101
BsgI	GTGCAG	4 cut(s)	1032, 1119, 2745, 2766
Bsh1236I	CGCG	3 cut(s)	100, 185, 237
Bsh1285I	CGRYCG	2 cut(s)	104, 235
BshNI	GGYRCC	1 cut(s)	1538
BsiEI	CGRYCG	2 cut(s)	104, 235
BsiHKAI	GWGCWC	5 cut(s)	349, 775, 834, 2431, 2593
BsiHKCI	CYCGRG	1 cut(s)	1428
BsiSI	CCGG	9 cut(s)	44, 104, 111, 116, 163, 173, 835, 2944, 3025
BslFI	GGGAC	2 cut(s)	656, 773
BslI	CCNNNNNNNGG	5 cut(s)	110, 722, 807, 1564, 3159
BsmAI	GTCTC	5 cut(s)	226, 695, 832, 1872, 2538
BsmBI	CGTCTC	1 cut(s)	226
BsmFI	GGGAC	2 cut(s)	656, 773
BsmI	GAATGC	3 cut(s)	797, 1285, 3189
BsoBI	CYCGRG	1 cut(s)	1428
Bsp1286I	GDGCHC	5 cut(s)	349, 775, 834, 2431, 2593
Bsp13I	TCCGGA	3 cut(s)	162, 172, 834
Bsp1720I	GCTNAGC	2 cut(s)	2130, 3129
Bsp19I	CCATGG	1 cut(s)	1563
BspACI	CCGC	9 cut(s)	86, 89, 100, 185, 231, 808, 1594, 1856, 3043
BspEI	TCCGGA	3 cut(s)	162, 172, 834
BspFNI	CGCG	3 cut(s)	100, 185, 237
BspHI	TCATGA	2 cut(s)	1150, 1503
BspLI	GGNNCC	7 cut(s)	161, 171, 207, 943, 1434, 1540, 3149
BspMAI	CTGCAG	1 cut(s)	3141
BspMI	ACCTGC	1 cut(s)	1795
BspOI	GCTAGC	1 cut(s)	1743
BspPI	GGATC	6 cut(s)	164, 177, 1548, 2305, 2954, 3160
BspQI	GCTCTTC	1 cut(s)	1060
BspT107I	GGYRCC	1 cut(s)	1538
BsrDI	GCAATG	2 cut(s)	1310, 1962
BsrFI	RCCGGY	2 cut(s)	103, 115
BsrI	ACTGG	7 cut(s)	620, 962, 1179, 1458, 1949, 2022, 2301
BssAI	RCCGGY	2 cut(s)	103, 115
BssECI	CCNNGG	4 cut(s)	244, 459, 1563, 3025
BssSI	CACGAG	1 cut(s)	2424
BssT1I	CCWWGG	2 cut(s)	459, 1563
Bst2BI	CACGAG	1 cut(s)	2424
Bst2UI	CCWGG	2 cut(s)	245, 2173
Bst4CI	ACNGT	4 cut(s)	1112, 2689, 2717, 3085
Bst6I	CTCTTC	4 cut(s)	350, 819, 1060, 1149
BstAPI	GCANNNNNTGC	2 cut(s)	1985, 2732
BstC8I	GCNNGC	9 cut(s)	117, 241, 1351, 1610, 1741, 1745, 1896, 2475, 2997
BstDSI	CCRYGG	1 cut(s)	1563
BstEII	GGTNACC	2 cut(s)	106, 1397
BstENI	CCTNNNNNAGG	1 cut(s)	720
BstF5I	GGATG	8 cut(s)	15, 171, 342, 673, 898, 1332, 1651, 2359
BstFNI	CGCG	3 cut(s)	100, 185, 237
BstH2I	RGCGCY	1 cut(s)	1350
BstHHI	GCGC	2 cut(s)	239, 1349
BstMAI	GTCTC	5 cut(s)	226, 695, 832, 1872, 2538
BstMCI	CGRYCG	2 cut(s)	104, 235
BstNI	CCWGG	2 cut(s)	245, 2173
BstNSI	RCATGY	3 cut(s)	484, 2735, 2999
BstPI	GGTNACC	2 cut(s)	106, 1397
BstSCI	CCNGG	4 cut(s)	110, 243, 2171, 3024
BstSFI	CTRYAG	3 cut(s)	1197, 2528, 3137
BstSLI	GKGCMC	1 cut(s)	349
BstUI	CGCG	3 cut(s)	100, 185, 237
BstV2I	GAAGAC	2 cut(s)	2100, 2699
BstX2I	RGATCY	4 cut(s)	169, 1553, 2310, 3165
BstXI	CCANNNNNNTGG	2 cut(s)	275, 1443
BstYI	RGATCY	4 cut(s)	169, 1553, 2310, 3165
BstZI	CGGCCG	1 cut(s)	101
BsuI	GTATCC	1 cut(s)	986
BtgI	CCRYGG	1 cut(s)	1563
BtgZI	GCGATG	1 cut(s)	296
BtrI	CACGTC	1 cut(s)	2911
BtsCI	GGATG	8 cut(s)	15, 171, 342, 673, 898, 1332, 1651, 2359
BtsI	GCAGTG	4 cut(s)	292, 1020, 1882, 2141
BtsIMutI	CAGTG	7 cut(s)	292, 1020, 1136, 1172, 1882, 2141, 2722
BveI	ACCTGC	1 cut(s)	1795
Cac8I	GCNNGC	9 cut(s)	117, 241, 1351, 1610, 1741, 1745, 1896, 2475, 2997
CaiI	CAGNNNCTG	4 cut(s)	599, 1453, 2473, 3094
CciI	TCATGA	2 cut(s)	1150, 1503
CfoI	GCGC	2 cut(s)	239, 1349
Cfr10I	RCCGGY	2 cut(s)	103, 115
Cfr13I	GGNCC	8 cut(s)	113, 927, 942, 959, 1208, 1433, 1484, 2175
CseI	GACGC	1 cut(s)	2747
Csp6I	GTAC	5 cut(s)	321, 439, 1627, 2685, 2976
CviQI	GTAC	5 cut(s)	321, 439, 1627, 2685, 2976
DraI	TTTAAA	1 cut(s)	916
DraIII	CACNNNGTG	1 cut(s)	689
DriI	GACNNNNNGTC	1 cut(s)	1405
EaeI	YGGCCR	1 cut(s)	101
EagI	CGGCCG	1 cut(s)	101
Eam1104I	CTCTTC	4 cut(s)	350, 819, 1060, 1149
Eam1105I	GACNNNNNGTC	1 cut(s)	1405
EarI	CTCTTC	4 cut(s)	350, 819, 1060, 1149
Ecl136II	GAGCTC	4 cut(s)	773, 832, 2429, 2591
EclXI	CGGCCG	1 cut(s)	101
Eco130I	CCWWGG	2 cut(s)	459, 1563
Eco147I	AGGCCT	2 cut(s)	715, 871
Eco24I	GRGCYC	4 cut(s)	775, 834, 2431, 2593
Eco47I	GGWCC	4 cut(s)	1208, 1433, 1484, 2175
Eco47III	AGCGCT	1 cut(s)	1348
Eco52I	CGGCCG	1 cut(s)	101
Eco53kI	GAGCTC	4 cut(s)	773, 832, 2429, 2591
Eco57I	CTGAAG	6 cut(s)	426, 965, 1146, 1406, 3011, 3116
Eco88I	CYCGRG	1 cut(s)	1428
Eco91I	GGTNACC	2 cut(s)	106, 1397
EcoICRI	GAGCTC	4 cut(s)	773, 832, 2429, 2591
EcoNI	CCTNNNNNAGG	1 cut(s)	720
EcoO65I	GGTNACC	2 cut(s)	106, 1397
EcoRI	GAATTC	1 cut(s)	2063
EcoRII	CCWGG	2 cut(s)	243, 2171
EcoT14I	CCWWGG	2 cut(s)	459, 1563
EcoT22I	ATGCAT	1 cut(s)	1285
EcoT38I	GRGCYC	4 cut(s)	775, 834, 2431, 2593
ErhI	CCWWGG	2 cut(s)	459, 1563
Esp3I	CGTCTC	1 cut(s)	226
FalI	AAGNNNNNCTT	4 cut(s)	507, 539, 1221, 1253
FaqI	GGGAC	2 cut(s)	656, 773
FauI	CCCGC	1 cut(s)	1587
FauNDI	CATATG	2 cut(s)	1072, 2329
FbaI	TGATCA	1 cut(s)	424
FblI	GTMKAC	2 cut(s)	138, 2527
FokI	GGATG	8 cut(s)	22, 178, 349, 680, 905, 1339, 1658, 2366
FriOI	GRGCYC	4 cut(s)	775, 834, 2431, 2593
FspBI	CTAG	9 cut(s)	698, 968, 1359, 1740, 1991, 2397, 2682, 2970, 2982
GlaI	GCGC	2 cut(s)	238, 1348
GsuI	CTGGAG	4 cut(s)	600, 2318, 2633, 2789
HaeII	RGCGCY	1 cut(s)	1350
HapII	CCGG	9 cut(s)	44, 104, 111, 116, 163, 173, 835, 2944, 3025
HgaI	GACGC	1 cut(s)	2747
HhaI	GCGC	2 cut(s)	239, 1349
Hin6I	GCGC	2 cut(s)	237, 1347
HinP1I	GCGC	2 cut(s)	237, 1347
HindIII	AAGCTT	3 cut(s)	516, 2216, 2855
HpaII	CCGG	9 cut(s)	44, 104, 111, 116, 163, 173, 835, 2944, 3025
HphI	GGTGA	5 cut(s)	118, 535, 790, 1409, 1895
Hpy166II	GTNNAC	9 cut(s)	139, 347, 817, 1436, 1583, 2528, 2720, 2914, 3081
Hpy8I	GTNNAC	9 cut(s)	139, 347, 817, 1436, 1583, 2528, 2720, 2914, 3081
Hpy99I	CGWCG	6 cut(s)	67, 70, 73, 100, 149, 185
HpyCH4III	ACNGT	4 cut(s)	1112, 2689, 2717, 3085
HpyCH4IV	ACGT	6 cut(s)	437, 735, 1629, 2017, 2722, 2910
HpySE526I	ACGT	6 cut(s)	437, 735, 1629, 2017, 2722, 2910
HspAI	GCGC	2 cut(s)	237, 1347
Kpn2I	TCCGGA	3 cut(s)	162, 172, 834
KroI	GCCGGC	1 cut(s)	115
KroNI	GCCGGC	1 cut(s)	117
Ksp22I	TGATCA	1 cut(s)	424
LguI	GCTCTTC	1 cut(s)	1060
LmnI	GCTCC	8 cut(s)	205, 282, 829, 837, 1344, 2230, 2299, 2588
MaeI	CTAG	9 cut(s)	698, 968, 1359, 1740, 1991, 2397, 2682, 2970, 2982
MaeII	ACGT	6 cut(s)	437, 735, 1629, 2017, 2722, 2910
MaeIII	GTNAC	6 cut(s)	106, 541, 550, 1397, 2189, 2939
MfeI	CAATTG	1 cut(s)	2004
MflI	RGATCY	4 cut(s)	169, 1553, 2310, 3165
MhlI	GDGCHC	5 cut(s)	349, 775, 834, 2431, 2593
MlyI	GAGTC	7 cut(s)	126, 301, 755, 834, 2140, 2669, 2909
MmeI	TCCRAC	3 cut(s)	378, 1235, 2541
Mph1103I	ATGCAT	1 cut(s)	1285
MroI	TCCGGA	3 cut(s)	162, 172, 834
MroNI	GCCGGC	1 cut(s)	115
MslI	CAYNNNNRTG	7 cut(s)	548, 564, 950, 1033, 1359, 1441, 2909
MspI	CCGG	9 cut(s)	44, 104, 111, 116, 163, 173, 835, 2944, 3025
MspR9I	CCNGG	4 cut(s)	112, 245, 2173, 3026
MunI	CAATTG	1 cut(s)	2004
Mva1269I	GAATGC	3 cut(s)	797, 1285, 3189
MvaI	CCWGG	2 cut(s)	245, 2173
MvnI	CGCG	3 cut(s)	100, 185, 237
NaeI	GCCGGC	1 cut(s)	117
NciI	CCSGG	2 cut(s)	112, 3026
NcoI	CCATGG	1 cut(s)	1563
NdeI	CATATG	2 cut(s)	1072, 2329
NgoMIV	GCCGGC	1 cut(s)	115
NheI	GCTAGC	1 cut(s)	1739
NlaIV	GGNNCC	7 cut(s)	161, 171, 207, 943, 1434, 1540, 3149
NmuCI	GTSAC	5 cut(s)	106, 541, 550, 1397, 2939
NsiI	ATGCAT	1 cut(s)	1285
NspI	RCATGY	3 cut(s)	484, 2735, 2999
OliI	CACNNNNGTG	1 cut(s)	548
PaeI	GCATGC	1 cut(s)	2999
PagI	TCATGA	2 cut(s)	1150, 1503
PceI	AGGCCT	2 cut(s)	715, 871
PciSI	GCTCTTC	1 cut(s)	1060
PcsI	WCGNNNNNNNCGW	1 cut(s)	141
PctI	GAATGC	3 cut(s)	797, 1285, 3189
PdiI	GCCGGC	1 cut(s)	117
PfeI	GAWTC	8 cut(s)	47, 271, 401, 1076, 1526, 1760, 2568, 2648
PleI	GAGTC	7 cut(s)	126, 301, 755, 834, 2140, 2668, 2909
PpsI	GAGTC	7 cut(s)	126, 301, 755, 834, 2140, 2668, 2909
PsiI	TTATAA	2 cut(s)	492, 1272
Psp124BI	GAGCTC	4 cut(s)	775, 834, 2431, 2593
Psp1406I	AACGTT	1 cut(s)	2017
Psp6I	CCWGG	2 cut(s)	243, 2171
PspEI	GGTNACC	2 cut(s)	106, 1397
PspGI	CCWGG	2 cut(s)	243, 2171
PspN4I	GGNNCC	7 cut(s)	161, 171, 207, 943, 1434, 1540, 3149
PspPI	GGNCC	8 cut(s)	113, 927, 942, 959, 1208, 1433, 1484, 2175
PstI	CTGCAG	1 cut(s)	3141
PstNI	CAGNNNCTG	4 cut(s)	599, 1453, 2473, 3094
PsuI	RGATCY	4 cut(s)	169, 1553, 2310, 3165
RsaI	GTAC	5 cut(s)	322, 440, 1628, 2686, 2977
RsaNI	GTAC	5 cut(s)	321, 439, 1627, 2685, 2976
RseI	CAYNNNNRTG	7 cut(s)	548, 564, 950, 1033, 1359, 1441, 2909
SacI	GAGCTC	4 cut(s)	775, 834, 2431, 2593
SapI	GCTCTTC	1 cut(s)	1060
Sau96I	GGNCC	8 cut(s)	113, 927, 942, 959, 1208, 1433, 1484, 2175
ScaI	AGTACT	1 cut(s)	2977
SchI	GAGTC	7 cut(s)	126, 301, 755, 834, 2140, 2669, 2909
ScrFI	CCNGG	4 cut(s)	112, 245, 2173, 3026
SduI	GDGCHC	5 cut(s)	349, 775, 834, 2431, 2593
SfcI	CTRYAG	3 cut(s)	1197, 2528, 3137
SfiI	GGCCNNNNNGGCC	1 cut(s)	121
SinI	GGWCC	4 cut(s)	1208, 1433, 1484, 2175
SmiMI	CAYNNNNRTG	7 cut(s)	548, 564, 950, 1033, 1359, 1441, 2909
SmlI	CTYRAG	4 cut(s)	1543, 1862, 1926, 2430
SmoI	CTYRAG	4 cut(s)	1543, 1862, 1926, 2430
SpeI	ACTAGT	1 cut(s)	2681
SphI	GCATGC	1 cut(s)	2999
SseBI	AGGCCT	2 cut(s)	715, 871
SsiI	CCGC	9 cut(s)	86, 89, 100, 185, 231, 808, 1594, 1856, 3043
SspI	AATATT	2 cut(s)	453, 1372
SspMI	CTAG	9 cut(s)	698, 968, 1359, 1740, 1991, 2397, 2682, 2970, 2982
SstI	GAGCTC	4 cut(s)	775, 834, 2431, 2593
StuI	AGGCCT	2 cut(s)	715, 871
StyD4I	CCNGG	4 cut(s)	110, 243, 2171, 3024
StyI	CCWWGG	2 cut(s)	459, 1563
TaaI	ACNGT	4 cut(s)	1112, 2689, 2717, 3085
TaiI	ACGT	6 cut(s)	440, 738, 1632, 2020, 2725, 2913
TaqI	TCGA	8 cut(s)	130, 305, 654, 843, 1047, 1870, 2663, 2796
TatI	WGTACW	3 cut(s)	320, 2684, 2975
TauI	GCSGC	5 cut(s)	88, 91, 103, 811, 3045
TfiI	GAWTC	8 cut(s)	47, 271, 401, 1076, 1526, 1760, 2568, 2648
TscAI	CASTG	7 cut(s)	292, 1020, 1143, 1179, 1882, 2141, 2722
TseFI	GTSAC	5 cut(s)	106, 541, 550, 1397, 2939
Tsp45I	GTSAC	5 cut(s)	106, 541, 550, 1397, 2939
TspGWI	ACGGA	6 cut(s)	51, 214, 554, 1679, 2561, 2580
TspRI	CASTG	7 cut(s)	292, 1020, 1143, 1179, 1882, 2141, 2722
VneI	GTGCAC	1 cut(s)	345
VpaK11BI	GGWCC	4 cut(s)	1208, 1433, 1484, 2175
XagI	CCTNNNNNAGG	1 cut(s)	720
XapI	RAATTY	4 cut(s)	849, 1259, 2063, 2601
XbaI	TCTAGA	2 cut(s)	697, 1990
XceI	RCATGY	3 cut(s)	484, 2735, 2999
XcmI	CCANNNNNNNNNTGG	1 cut(s)	627
XmiI	GTMKAC	2 cut(s)	138, 2527
XspI	CTAG	9 cut(s)	698, 968, 1359, 1740, 1991, 2397, 2682, 2970, 2982
ZrmI	AGTACT	1 cut(s)	2977
Zsp2I	ATGCAT	1 cut(s)	1285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.