Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0007375

Physical Location & Seq

Genomic Coordinates Reverse (-)

2578896 .. 2585465

Gene Structure 6570 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G053400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3204 bp

ATGAGGAGGTTCTTCAGAGGAAGAGATGCTTCCTCCGATTCTTCACCTCCCACCCCGTCGTTCTCTCCCTCACCGTCGTCGCGATCGTCGGCGCCGGTGACCGGTCCGCCGAGGCCGATACGACTTGTTTACTGCGACGACAATGGAAAGTTTAGGATGGATCAGGAAGCGGTATCCATGCTCCAGCTCGTGAAGGAACCTATCGGTATAGTCGCCGTCTGTGGCCGTGCTCGCCAGGGCAAGAGCTTCATTCTAAACCAGCTTCTTGGAAGGAGTGGTGGATTTCAAGTAGCATCTACGCATCGCCCATGTACGAAAGGGCTATGGCTATGGAGTGCACCCTTTAAGAGAACTGCTCTTGATGGAACTGAATACAATCTATTACTATTGGATACTGAAGGAATAGATGCCTTTGATCAGACGGAAACATACAGCACACAGATATTTTCCTTGGCCGTTCTCTTATCTAGCATGTTTATTTACAACCAGATGGGTGGTATAGATGAAGGTTCACTCGATCGTATCTCTCTTGTCACTCAAATGACTAAACATATACGTGTTAAAGCCTCTGGAGGAACCACAGCTTCTGAAATTGGCCAGTTCTCTCCAATCTTTGTGTGGCTCTTAAGGGACTTCTATCTGGATTTATCTGAGGATAGTGGAAGGATAACACCTCGTGACTATCTGGAGCTTGCTTTGAAGCCAGTTGATGACAGAAAAAGGGATGTAGTTGCGAAAAATGAGATACGAGCCTCCATTCGAGCTCTATTTCCAGATAGAGAATGCTTCACCCTTGTACGGCCTTTGAACAACGAACATGATCTACAGAGACTTGACGAAATTCAGTTGGACAAATTAAGGCCTGAATTTAGATCTGGGCTAGACGCATTGACAAGGTTTGTTTTTGAAAGAACAAGGCCCAAGCAAGTTGGGGCAACTATGATGACGGGTCCAGTTCTAGTTGGCATCACACAGTCTTATCTTGATGCTCTAAATAAAGGCGCGGTGCCTACCATATCCTCTTCATGGCAGAGTGTCGAAGAAGATGGGTGCCGAACAGCATATGATTATGCTCTTGAGGTGTATAAGTCTGCTTTTCACCGTCCGAAAGATCCCGAAGAAGCTGCATTCAGGGAAGCGCATGAAAAGGCAGTTCAAAAATCATTGGCTGCATTTAATGATGGTGCTGTAGGGGTTGGTTCAGCGAGGAAGAAATACGAGGCGGAGCTCCACAAAAAGCTGAAAAAGGAGTTTGAGGATTGTAAAAGGAATGCATATATGGAGGCAGAGTTGCAATGTTCAAATTCTATACAAAGCATGGAAAGGAAGCTGAGAATAGCTTGCCATGCTAGTGATGCTAATATTGATAATGTTCTGAAGGTTCTTGATGGTCTTCTAGCCGACTATGAAGCAGCAAGTCATGGTCCAGCAAAATGGCAGAAACTGACCAGTTTCTTACAAAAGAGTTTGGAAGGTCCAATACTTGACCTTGCCAAGAGACTGATTGACCAAGCTGGATCGGAGAAGAGTACCCTCATGTTGAGATGCCGCTCAATAGAAGATAAGTTGGGGTTACTGAACAAGCAGCTGGAGTCTAGTGAGAAGTCTAAGTCTGAATATCTGAAGCGTTATGAGGATGCTATCAACGACAAGAAGAAGTTAGCTGATGAATATATGGGCCGCATTAATAACTTACAGAGTAATTCCAGCTCACTGGGTGAAAGATGTTCTAGCTTAGTTAAAACATTGGATTCTGCAAAGCAAGAATCCTTAGAGTGGAAAAGAAAATACGAACAGGTCATATCAAAGCAGAAGGCTGAGGAAGACCAAGCTAGTTCTGAAATTGCAATTCTCAAGTCCCGATGCAGTGCTGGTGAAGCAAGGCTGGCTGCTGCTCGGGAACAAGCTCAGTCTGCTCAAGAGGAGGCTCAGGAGTGGAAACGCAAGTATGACATTGCTTATAGAGAAGCAAAAGCTGCTCTAGAGAAGGCTGCAATTGTCCAAGAACGTTCAAATAAGGAAACACAAAAGAGAGAAGATGCTTTGAGGGAAGAATTCGCGAGTAGTTTGGCTGAGAAGGAGGAGGAAATAAAGGATAAGACGGCCAAGATTGAATATGCTGAGCAGTGCTTGACAACTCTAAGACTAGAACTGAAGACTGCCAAATCGAAAGTAGATAGTTATGACGCTGAAATATCATCGATGAAGCTTGAAATCAAGGAGTTAAGTCAAAAATTAGAAGCTGCAAATGCAAAGGCCCACTCATTTGAGAGAGAAAAAAAGATACTGGAGCAGGAGAAGATCTATCTGGGGCAGAAGTACGAATCTGAAATAAAAAGACTTGATGAAGTCCAAGAAAGGTGTAAAATTGCTGAAAAAGAAGCCACAAGAGCGACTGATATTGCTGATAAAGCACGAGCGCAAGCAGATATTGCTCAAAAGGAAAAGAGTGAGATGCAGAAGTTGGCAATGGAAAGATTGGCCCAAATTGAGAGGGCTGAGAGGCATATTGAAACTTTACAAAGGGAAAAAAGAGACTTGGATGATGAGTTAGAGAGAATTCGTGTATCAGAGATGGGAGCTCATTCGAAAGTTGCTCTGCTGGAGGCAAGAGTTGAAGAAAGAGAGAAGGAAATAGAATCACTATTAAAATCAAATAACGAGCAGAGAACTAGTACTGTTCACGTCCTTCAAGGCCTCCTGGACAGTGAGCGTGCAGCACATGCAGATGCAAACAATAGGGCAGACTCCCTGTCTCTTCAGCTACAAGCTGCACAGGCAAAGCTTGATTCACTCCAGCAAGAATTGACTTCTGTTCGGCTGAATGAAACAGCACTGGATAGCAAGCTAAAGACTGCTTCCCACGGGAAACGCTCGAGGGTAGATGACTATGAAATGGGCATGGACTCCGTTCAAGACATGGAGATGAGTGACCGGATTGTAAGAGTAAATAAGAGGTCTAGAAGTACTACTAGCCCTCTAAAGCGCACACAAGCTGAAGATGGTGGTTCCGTATTCAAGGGAGATGAGGATACCCGCAGTCAGCAAACTAACTCGGAAGACTATAGAAAGTTCACTGTCACGAAAATTAAGCAGGAACTCACAAAACATAATTTTGGTGCCCAAGTGCTGGATATGAGAACTGGTGCTAGCAAAAGAGAATGGCTTGAACTGTATGAGAGCTGTATACTTCAGAAGTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0002376 GO:0003674 GO:0005488 GO:0005515 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005794 GO:0005829 GO:0005856 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0008104 GO:0008150 GO:0009987 GO:0010033 GO:0012505 GO:0015629 GO:0017076 GO:0019001 GO:0019221 GO:0023052 GO:0031974 GO:0031981 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0033036 GO:0033365 GO:0034097 GO:0034340 GO:0034341 GO:0034504 GO:0034612 GO:0034613 GO:0035639 GO:0036094 GO:0042221 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046983 GO:0048471 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051641 GO:0051716 GO:0060333 GO:0060337 GO:0065007 GO:0070013 GO:0070555 GO:0070727 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071347 GO:0071356 GO:0071357 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04621 map04621

Pfam Domains

Protein Families

GBP GBP_C

Protein Analysis

1068

Amino Acids

120.74

Weight (kDa)

6.8

Isoelectric Point (pI)

50.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46070
fragaria_vesca	FvH4_3g08471 FvH4_3g08471 FvH4_3g08471 FvH4_3g08471 FvH4_3g08471 FvH4_3g08471
malus_domestica	MD05G1309600.v1.1 MD10G1288200.v1.1
prunus_persica	Prupe.4G053400_v2.0.a1
pyrus_communis	pycom05g28600 pycom10g24130 pycom10g24140
rosa_chinensis	RchiOBHm_Chr5g0009341
rosa_laevigata	RLG00000031653
rosa_multiflora	Rmu_sc0002711.1_g000023 Rmu_sc0009480.1_g000002
rosa_roxburghii	Rroxscaffold_1G00066750 Rroxscaffold_1G00067450
rosa_rugosa	Rorug04G0441800
rosa_samantha	Rh5AG072700 Rh5BG069000 Rh5CG081600 Rh5DG069300
rosa_wichuraiana	Rw5G006790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	91, 1006, 1050, 3119
AccB7I	CCANNNNNTGG	1 cut(s)	3130
AccBSI	CCGCTC	1 cut(s)	1551
AccI	GTMKAC	1 cut(s)	3187
AccII	CGCG	3 cut(s)	82, 1004, 2060
AciI	CCGC	7 cut(s)	107, 170, 1004, 1223, 1549, 1681, 3037
AclI	AACGTT	1 cut(s)	2008
AclWI	GGATC	3 cut(s)	168, 1106, 1525
AcoI	YGGCCR	4 cut(s)	223, 453, 595, 2103
AcsI	RAATTY	5 cut(s)	840, 866, 1303, 2054, 2559
AcuI	CTGAAG	7 cut(s)	417, 1397, 1643, 2174, 2744, 3018, 3176
AcyI	GRCGYC	1 cut(s)	92
AdeI	CACNNNGTG	2 cut(s)	677, 1718
AfaI	GTAC	6 cut(s)	313, 798, 1531, 2321, 2677, 2968
AfiI	CCNNNNNNNGG	5 cut(s)	101, 798, 1026, 1776, 3130
AflII	CTTAAG	1 cut(s)	625
AflIII	ACRYGT	1 cut(s)	556
AgeI	ACCGGT	1 cut(s)	101
AhdI	GACNNNNNGTC	1 cut(s)	2752
AhlI	ACTAGT	1 cut(s)	2672
AjiI	CACGTC	1 cut(s)	2686
AjnI	CCWGG	2 cut(s)	234, 2700
Alw21I	GWGCWC	5 cut(s)	232, 340, 766, 1230, 2584
Alw26I	GTCTC	4 cut(s)	823, 1492, 2529, 2760
Alw44I	GTGCAC	1 cut(s)	336
AlwI	GGATC	3 cut(s)	168, 1106, 1525
AlwNI	CAGNNNCTG	2 cut(s)	587, 1444
Ama87I	CYCGRG	2 cut(s)	1896, 2875
ApaLI	GTGCAC	1 cut(s)	336
ApoI	RAATTY	5 cut(s)	840, 866, 1303, 2054, 2559
AseI	ATTAAT	1 cut(s)	1686
AsiGI	ACCGGT	1 cut(s)	101
AspLEI	GCGC	5 cut(s)	94, 1004, 1141, 2422, 2988
AspS9I	GGNCC	8 cut(s)	104, 918, 950, 1424, 1475, 1678, 2257, 2482
AsuHPI	GGTGA	7 cut(s)	36, 63, 109, 781, 1091, 1730, 1886
AsuII	TTCGAA	1 cut(s)	2588
AsuNHI	GCTAGC	1 cut(s)	3149
AvaI	CYCGRG	2 cut(s)	1896, 2875
AvaII	GGWCC	4 cut(s)	104, 950, 1424, 1475
BaeGI	GKGCMC	2 cut(s)	340, 3124
BalI	TGGCCA	1 cut(s)	597
BanI	GGYRCC	4 cut(s)	91, 1006, 1050, 3119
BanII	GRGCYC	3 cut(s)	766, 1230, 2584
BarI	GAAGNNNNNNTAC	2 cut(s)	1464, 1496
BauI	CACGAG	3 cut(s)	188, 675, 2415
BbsI	GAAGAC	4 cut(s)	1385, 1830, 2162, 3066
Bbv12I	GWGCWC	5 cut(s)	232, 340, 766, 1230, 2584
BbvCI	CCTCAGC	1 cut(s)	1818
BccI	CCATC	8 cut(s)	151, 356, 484, 1040, 1175, 1382, 2569, 2996
BceAI	ACGGC	5 cut(s)	200, 210, 440, 815, 2118
BcgI	CGANNNNNNTGC	2 cut(s)	1106, 1140
BciT130I	CCWGG	2 cut(s)	236, 2702
BciVI	GTATCC	3 cut(s)	184, 385, 3025
BclI	TGATCA	1 cut(s)	415
BcoDI	GTCTC	4 cut(s)	823, 1492, 2529, 2760
BcuI	ACTAGT	1 cut(s)	2672
BfmI	CTRYAG	3 cut(s)	824, 1188, 3064
BfoI	RGCGCY	1 cut(s)	95
BfrI	CTTAAG	1 cut(s)	625
BfuI	GTATCC	3 cut(s)	184, 385, 3025
BglII	AGATCT	2 cut(s)	872, 2301
BlpI	GCTNAGC	1 cut(s)	2121
BmcAI	AGTACT	2 cut(s)	2677, 2968
Bme1390I	CCNGG	2 cut(s)	236, 2702
Bme18I	GGWCC	4 cut(s)	104, 950, 1424, 1475
BmeRI	GACNNNNNGTC	1 cut(s)	2752
BmeT110I	CYCGRG	2 cut(s)	1896, 2875
BmgBI	CACGTC	1 cut(s)	2686
BmgT120I	GGNCC	8 cut(s)	104, 918, 950, 1424, 1475, 1678, 2257, 2482
BmiI	GGNNCC	8 cut(s)	93, 198, 577, 951, 1008, 1052, 3010, 3121
BmrFI	CCNGG	2 cut(s)	236, 2702
BmrI	ACTGGG	1 cut(s)	1724
BmtI	GCTAGC	1 cut(s)	3153
BmuI	ACTGGG	1 cut(s)	1724
BpiI	GAAGAC	4 cut(s)	1385, 1830, 2162, 3066
BplI	GAGNNNNNCTC	2 cut(s)	340, 372
BpmI	CTGGAG	7 cut(s)	167, 591, 707, 1610, 2309, 2624, 2780
Bpu10I	CCTNAGC	2 cut(s)	1818, 1929
Bpu1102I	GCTNAGC	1 cut(s)	2121
Bpu14I	TTCGAA	1 cut(s)	2588
BpuEI	CTTGAG	3 cut(s)	1097, 1838, 1902
Bsa29I	ATCGAT	1 cut(s)	2201
BsaAI	YACGTR	1 cut(s)	557
BsaHI	GRCGYC	1 cut(s)	92
BsaJI	CCNNGG	4 cut(s)	110, 235, 450, 2863
BsaWI	WCCGGW	2 cut(s)	101, 2934
BsaXI	ACNNNNNCTCC	2 cut(s)	1274, 1304
Bsc4I	CCNNNNNNNGG	5 cut(s)	101, 798, 1026, 1776, 3130
Bse118I	RCCGGY	2 cut(s)	94, 101
Bse1I	ACTGG	8 cut(s)	598, 704, 953, 1449, 1719, 2292, 2841, 3148
Bse3DI	GCAATG	3 cut(s)	1301, 1953, 2475
BseBI	CCWGG	2 cut(s)	236, 2702
BseCI	ATCGAT	1 cut(s)	2201
BseDI	CCNNGG	4 cut(s)	110, 235, 450, 2863
BseGI	GGATG	4 cut(s)	162, 730, 1642, 2548
BseLI	CCNNNNNNNGG	5 cut(s)	101, 798, 1026, 1776, 3130
BseMI	GCAATG	3 cut(s)	1301, 1953, 2475
BseMII	CTCAG	8 cut(s)	642, 1322, 1809, 1922, 1943, 2064, 2112, 2490
BseNI	ACTGG	8 cut(s)	598, 704, 953, 1449, 1719, 2292, 2841, 3148
BseRI	GAGGAG	3 cut(s)	19, 1937, 2096
BseSI	GKGCMC	2 cut(s)	340, 3124
BsgI	GTGCAG	2 cut(s)	2736, 2757
Bsh1236I	CGCG	3 cut(s)	82, 1004, 2060
Bsh1285I	CGRYCG	2 cut(s)	86, 520
BshNI	GGYRCC	4 cut(s)	91, 1006, 1050, 3119
BshTI	ACCGGT	1 cut(s)	101
BshVI	ATCGAT	1 cut(s)	2201
BsiEI	CGRYCG	2 cut(s)	86, 520
BsiHKAI	GWGCWC	5 cut(s)	232, 340, 766, 1230, 2584
BsiHKCI	CYCGRG	2 cut(s)	1896, 2875
BsiSI	CCGG	3 cut(s)	95, 102, 2935
BslFI	GGGAC	2 cut(s)	644, 1843
BslI	CCNNNNNNNGG	5 cut(s)	101, 798, 1026, 1776, 3130
BsmAI	GTCTC	4 cut(s)	823, 1492, 2529, 2760
BsmFI	GGGAC	2 cut(s)	644, 1843
BsmI	GAATGC	3 cut(s)	788, 1127, 1276
BsoBI	CYCGRG	2 cut(s)	1896, 2875
Bsp119I	TTCGAA	1 cut(s)	2588
Bsp1286I	GDGCHC	6 cut(s)	232, 340, 766, 1230, 2584, 3124
Bsp143I	GATC	9 cut(s)	83, 160, 415, 517, 820, 872, 1111, 1517, 2301
Bsp1720I	GCTNAGC	1 cut(s)	2121
Bsp68I	TCGCGA	2 cut(s)	82, 2060
BspACI	CCGC	7 cut(s)	107, 170, 1004, 1223, 1549, 1681, 3037
BspCNI	CTCAG	8 cut(s)	643, 1323, 1810, 1921, 1942, 2065, 2113, 2491
BspDI	ATCGAT	1 cut(s)	2201
BspFNI	CGCG	3 cut(s)	82, 1004, 2060
BspLI	GGNNCC	8 cut(s)	93, 198, 577, 951, 1008, 1052, 3010, 3121
BspOI	GCTAGC	1 cut(s)	3153
BspPI	GGATC	3 cut(s)	168, 1106, 1525
BspT104I	TTCGAA	1 cut(s)	2588
BspT107I	GGYRCC	4 cut(s)	91, 1006, 1050, 3119
BspTI	CTTAAG	1 cut(s)	625
BsrBI	CCGCTC	1 cut(s)	1551
BsrDI	GCAATG	3 cut(s)	1301, 1953, 2475
BsrFI	RCCGGY	2 cut(s)	94, 101
BsrI	ACTGG	8 cut(s)	598, 704, 953, 1449, 1719, 2292, 2841, 3148
BssAI	RCCGGY	2 cut(s)	94, 101
BssECI	CCNNGG	4 cut(s)	110, 235, 450, 2863
BssMI	GATC	9 cut(s)	83, 160, 415, 517, 820, 872, 1111, 1517, 2301
BssNAI	GTATAC	1 cut(s)	3188
BssNI	GRCGYC	1 cut(s)	92
BssSI	CACGAG	3 cut(s)	188, 675, 2415
BssT1I	CCWWGG	1 cut(s)	450
Bst1107I	GTATAC	1 cut(s)	3188
Bst2BI	CACGAG	3 cut(s)	188, 675, 2415
Bst2UI	CCWGG	2 cut(s)	236, 2702
Bst4CI	ACNGT	7 cut(s)	75, 975, 1103, 2680, 2708, 3079, 3174
Bst6I	CTCTTC	4 cut(s)	16, 1027, 1520, 2763
BstACI	GRCGYC	1 cut(s)	92
BstAFI	CTTAAG	1 cut(s)	625
BstAPI	GCANNNNNTGC	3 cut(s)	1976, 2432, 2723
BstBAI	YACGTR	1 cut(s)	557
BstBI	TTCGAA	1 cut(s)	2588
BstC8I	GCNNGC	8 cut(s)	232, 693, 1342, 1887, 2424, 2715, 2846, 3151
BstDSI	CCRYGG	1 cut(s)	2863
BstEII	GGTNACC	1 cut(s)	97
BstF5I	GGATG	4 cut(s)	162, 730, 1642, 2548
BstFNI	CGCG	3 cut(s)	82, 1004, 2060
BstH2I	RGCGCY	1 cut(s)	95
BstHHI	GCGC	5 cut(s)	94, 1004, 1141, 2422, 2988
BstKTI	GATC	9 cut(s)	86, 163, 418, 520, 823, 875, 1114, 1520, 2304
BstMAI	GTCTC	4 cut(s)	823, 1492, 2529, 2760
BstMBI	GATC	9 cut(s)	83, 160, 415, 517, 820, 872, 1111, 1517, 2301
BstMCI	CGRYCG	2 cut(s)	86, 520
BstNI	CCWGG	2 cut(s)	236, 2702
BstNSI	RCATGY	2 cut(s)	475, 2726
BstPI	GGTNACC	1 cut(s)	97
BstSCI	CCNGG	2 cut(s)	234, 2700
BstSFI	CTRYAG	3 cut(s)	824, 1188, 3064
BstSLI	GKGCMC	2 cut(s)	340, 3124
BstUI	CGCG	3 cut(s)	82, 1004, 2060
BstV2I	GAAGAC	4 cut(s)	1385, 1830, 2162, 3066
BstX2I	RGATCY	3 cut(s)	872, 1111, 2301
BstXI	CCANNNNNNTGG	4 cut(s)	266, 494, 1434, 1714
BstYI	RGATCY	3 cut(s)	872, 1111, 2301
BstZ17I	GTATAC	1 cut(s)	3188
Bsu15I	ATCGAT	1 cut(s)	2201
BsuI	GTATCC	3 cut(s)	184, 385, 3025
BsuTUI	ATCGAT	1 cut(s)	2201
BtgI	CCRYGG	1 cut(s)	2863
BtgZI	GCGATG	1 cut(s)	287
BtrI	CACGTC	1 cut(s)	2686
BtsCI	GGATG	4 cut(s)	162, 730, 1642, 2548
BtsI	GCAGTG	2 cut(s)	1873, 2132
BtsIMutI	CAGTG	6 cut(s)	1712, 1873, 2132, 2713, 2834, 3075
BtuMI	TCGCGA	2 cut(s)	82, 2060
Cac8I	GCNNGC	8 cut(s)	232, 693, 1342, 1887, 2424, 2715, 2846, 3151
CaiI	CAGNNNCTG	2 cut(s)	587, 1444
CfoI	GCGC	5 cut(s)	94, 1004, 1141, 2422, 2988
Cfr10I	RCCGGY	2 cut(s)	94, 101
Cfr13I	GGNCC	8 cut(s)	104, 918, 950, 1424, 1475, 1678, 2257, 2482
ClaI	ATCGAT	1 cut(s)	2201
CpoI	CGGWCCG	1 cut(s)	104
CseI	GACGC	2 cut(s)	893, 2195
Csp6I	GTAC	6 cut(s)	312, 797, 1530, 2320, 2676, 2967
CspAI	ACCGGT	1 cut(s)	101
CspI	CGGWCCG	1 cut(s)	104
CviQI	GTAC	6 cut(s)	312, 797, 1530, 2320, 2676, 2967
DinI	GGCGCC	1 cut(s)	93
DpnI	GATC	9 cut(s)	85, 162, 417, 519, 822, 874, 1113, 1519, 2303
DpnII	GATC	9 cut(s)	83, 160, 415, 517, 820, 872, 1111, 1517, 2301
DraIII	CACNNNGTG	2 cut(s)	677, 1718
DriI	GACNNNNNGTC	1 cut(s)	2752
EaeI	YGGCCR	4 cut(s)	223, 453, 595, 2103
Eam1104I	CTCTTC	4 cut(s)	16, 1027, 1520, 2763
Eam1105I	GACNNNNNGTC	1 cut(s)	2752
EarI	CTCTTC	4 cut(s)	16, 1027, 1520, 2763
EciI	GGCGGA	2 cut(s)	96, 1238
Ecl136II	GAGCTC	3 cut(s)	764, 1228, 2582
Eco130I	CCWWGG	1 cut(s)	450
Eco147I	AGGCCT	2 cut(s)	862, 2697
Eco24I	GRGCYC	3 cut(s)	766, 1230, 2584
Eco47I	GGWCC	4 cut(s)	104, 950, 1424, 1475
Eco53kI	GAGCTC	3 cut(s)	764, 1228, 2582
Eco57I	CTGAAG	7 cut(s)	417, 1397, 1643, 2174, 2744, 3018, 3176
Eco88I	CYCGRG	2 cut(s)	1896, 2875
Eco91I	GGTNACC	1 cut(s)	97
EcoICRI	GAGCTC	3 cut(s)	764, 1228, 2582
EcoO65I	GGTNACC	1 cut(s)	97
EcoRI	GAATTC	2 cut(s)	2054, 2559
EcoRII	CCWGG	2 cut(s)	234, 2700
EcoT14I	CCWWGG	1 cut(s)	450
EcoT22I	ATGCAT	1 cut(s)	1276
EcoT38I	GRGCYC	3 cut(s)	766, 1230, 2584
EgeI	GGCGCC	1 cut(s)	93
EheI	GGCGCC	1 cut(s)	93
ErhI	CCWWGG	1 cut(s)	450
FalI	AAGNNNNNCTT	2 cut(s)	13, 45
FaqI	GGGAC	2 cut(s)	644, 1843
FauI	CCCGC	1 cut(s)	3044
FauNDI	CATATG	1 cut(s)	1063
FbaI	TGATCA	1 cut(s)	415
FblI	GTMKAC	1 cut(s)	3187
FokI	GGATG	4 cut(s)	169, 737, 1649, 2555
FriOI	GRGCYC	3 cut(s)	766, 1230, 2584
GlaI	GCGC	5 cut(s)	93, 1003, 1140, 2421, 2987
GsuI	CTGGAG	7 cut(s)	167, 591, 707, 1610, 2309, 2624, 2780
HaeII	RGCGCY	1 cut(s)	95
HapII	CCGG	3 cut(s)	95, 102, 2935
HgaI	GACGC	2 cut(s)	893, 2195
HhaI	GCGC	5 cut(s)	94, 1004, 1141, 2422, 2988
Hin1I	GRCGYC	1 cut(s)	92
Hin6I	GCGC	5 cut(s)	92, 1002, 1139, 2420, 2986
HinP1I	GCGC	5 cut(s)	92, 1002, 1139, 2420, 2986
HindIII	AAGCTT	2 cut(s)	2207, 2783
HinfI	GANTC	9 cut(s)	38, 1592, 1751, 1766, 2324, 2639, 2747, 2789, 2906
HpaII	CCGG	3 cut(s)	95, 102, 2935
HphI	GGTGA	7 cut(s)	36, 63, 109, 781, 1091, 1730, 1886
Hpy166II	GTNNAC	6 cut(s)	130, 338, 512, 2683, 3075, 3188
Hpy8I	GTNNAC	6 cut(s)	130, 338, 512, 2683, 3075, 3188
Hpy99I	CGWCG	5 cut(s)	61, 79, 82, 91, 140
HpyCH4III	ACNGT	7 cut(s)	75, 975, 1103, 2680, 2708, 3079, 3174
HpyCH4IV	ACGT	3 cut(s)	556, 2008, 2685
HpySE526I	ACGT	3 cut(s)	556, 2008, 2685
Hsp92I	GRCGYC	1 cut(s)	92
HspAI	GCGC	5 cut(s)	92, 1002, 1139, 2420, 2986
KasI	GGCGCC	1 cut(s)	91
Ksp22I	TGATCA	1 cut(s)	415
Kzo9I	GATC	9 cut(s)	83, 160, 415, 517, 820, 872, 1111, 1517, 2301
LmnI	GCTCC	6 cut(s)	186, 688, 1225, 1233, 2290, 2579
MaeII	ACGT	3 cut(s)	556, 2008, 2685
MaeIII	GTNAC	6 cut(s)	97, 532, 677, 1572, 2930, 3079
MalI	GATC	9 cut(s)	85, 162, 417, 519, 822, 874, 1113, 1519, 2303
MbiI	CCGCTC	1 cut(s)	1551
MboI	GATC	9 cut(s)	83, 160, 415, 517, 820, 872, 1111, 1517, 2301
MfeI	CAATTG	1 cut(s)	1995
MflI	RGATCY	3 cut(s)	872, 1111, 2301
MhlI	GDGCHC	6 cut(s)	232, 340, 766, 1230, 2584, 3124
MlsI	TGGCCA	1 cut(s)	597
MluNI	TGGCCA	1 cut(s)	597
Mly113I	GGCGCC	1 cut(s)	92
MlyI	GAGTC	3 cut(s)	1601, 2741, 2900
MmeI	TCCRAC	1 cut(s)	828
Mox20I	TGGCCA	1 cut(s)	597
Mph1103I	ATGCAT	1 cut(s)	1276
MscI	TGGCCA	1 cut(s)	597
MslI	CAYNNNNRTG	5 cut(s)	539, 555, 1350, 2727, 2924
Msp20I	TGGCCA	1 cut(s)	597
MspA1I	CMGCKG	1 cut(s)	1588
MspCI	CTTAAG	1 cut(s)	625
MspI	CCGG	3 cut(s)	95, 102, 2935
MspR9I	CCNGG	2 cut(s)	236, 2702
MunI	CAATTG	1 cut(s)	1995
Mva1269I	GAATGC	3 cut(s)	788, 1127, 1276
MvaI	CCWGG	2 cut(s)	236, 2702
MvnI	CGCG	3 cut(s)	82, 1004, 2060
NarI	GGCGCC	1 cut(s)	92
NdeI	CATATG	1 cut(s)	1063
NdeII	GATC	9 cut(s)	83, 160, 415, 517, 820, 872, 1111, 1517, 2301
NheI	GCTAGC	1 cut(s)	3149
NlaIV	GGNNCC	8 cut(s)	93, 198, 577, 951, 1008, 1052, 3010, 3121
NmeAIII	GCCGAG	1 cut(s)	135
NmuCI	GTSAC	5 cut(s)	97, 532, 677, 2930, 3079
NruI	TCGCGA	2 cut(s)	82, 2060
NsiI	ATGCAT	1 cut(s)	1276
NspI	RCATGY	2 cut(s)	475, 2726
NspV	TTCGAA	1 cut(s)	2588
PaeR7I	CTCGAG	1 cut(s)	2875
PceI	AGGCCT	2 cut(s)	862, 2697
PcsI	WCGNNNNNNNCGW	1 cut(s)	83
PctI	GAATGC	3 cut(s)	788, 1127, 1276
PfeI	GAWTC	6 cut(s)	38, 1751, 1766, 2324, 2639, 2789
PflMI	CCANNNNNTGG	1 cut(s)	3130
PfoI	TCCNGGA	1 cut(s)	2700
PinAI	ACCGGT	1 cut(s)	101
Ple19I	CGATCG	2 cut(s)	86, 520
PleI	GAGTC	3 cut(s)	1600, 2741, 2900
PluTI	GGCGCC	1 cut(s)	95
PpsI	GAGTC	3 cut(s)	1600, 2741, 2900
Ppu21I	YACGTR	1 cut(s)	557
PshBI	ATTAAT	1 cut(s)	1686
Psp124BI	GAGCTC	3 cut(s)	766, 1230, 2584
Psp1406I	AACGTT	1 cut(s)	2008
Psp6I	CCWGG	2 cut(s)	234, 2700
PspEI	GGTNACC	1 cut(s)	97
PspGI	CCWGG	2 cut(s)	234, 2700
PspN4I	GGNNCC	8 cut(s)	93, 198, 577, 951, 1008, 1052, 3010, 3121
PspPI	GGNCC	8 cut(s)	104, 918, 950, 1424, 1475, 1678, 2257, 2482
PspXI	VCTCGAGB	1 cut(s)	2875
PsrI	GAACNNNNNNTAC	2 cut(s)	807, 839
PstNI	CAGNNNCTG	2 cut(s)	587, 1444
PsuI	RGATCY	3 cut(s)	872, 1111, 2301
PvuI	CGATCG	2 cut(s)	86, 520
PvuII	CAGCTG	1 cut(s)	1588
RruI	TCGCGA	2 cut(s)	82, 2060
RsaI	GTAC	6 cut(s)	313, 798, 1531, 2321, 2677, 2968
RsaNI	GTAC	6 cut(s)	312, 797, 1530, 2320, 2676, 2967
RseI	CAYNNNNRTG	5 cut(s)	539, 555, 1350, 2727, 2924
Rsr2I	CGGWCCG	1 cut(s)	104
RsrII	CGGWCCG	1 cut(s)	104
SacI	GAGCTC	3 cut(s)	766, 1230, 2584
Sau3AI	GATC	9 cut(s)	83, 160, 415, 517, 820, 872, 1111, 1517, 2301
Sau96I	GGNCC	8 cut(s)	104, 918, 950, 1424, 1475, 1678, 2257, 2482
ScaI	AGTACT	2 cut(s)	2677, 2968
SchI	GAGTC	3 cut(s)	1601, 2741, 2900
ScrFI	CCNGG	2 cut(s)	236, 2702
SduI	GDGCHC	6 cut(s)	232, 340, 766, 1230, 2584, 3124
SfcI	CTRYAG	3 cut(s)	824, 1188, 3064
SfoI	GGCGCC	1 cut(s)	93
Sfr274I	CTCGAG	1 cut(s)	2875
SfuI	TTCGAA	1 cut(s)	2588
SgrAI	CRCCGGYG	1 cut(s)	94
SinI	GGWCC	4 cut(s)	104, 950, 1424, 1475
SlaI	CTCGAG	1 cut(s)	2875
SmiMI	CAYNNNNRTG	5 cut(s)	539, 555, 1350, 2727, 2924
SmlI	CTYRAG	5 cut(s)	625, 1076, 1853, 1917, 2875
SmoI	CTYRAG	5 cut(s)	625, 1076, 1853, 1917, 2875
SpeI	ACTAGT	1 cut(s)	2672
SseBI	AGGCCT	2 cut(s)	862, 2697
SsiI	CCGC	7 cut(s)	107, 170, 1004, 1223, 1549, 1681, 3037
SspDI	GGCGCC	1 cut(s)	91
SspI	AATATT	1 cut(s)	1363
SstI	GAGCTC	3 cut(s)	766, 1230, 2584
StuI	AGGCCT	2 cut(s)	862, 2697
StyD4I	CCNGG	2 cut(s)	234, 2700
StyI	CCWWGG	1 cut(s)	450
TaaI	ACNGT	7 cut(s)	75, 975, 1103, 2680, 2708, 3079, 3174
TaiI	ACGT	3 cut(s)	559, 2011, 2688
TaqI	TCGA	7 cut(s)	516, 760, 1038, 2168, 2201, 2588, 2876
TatI	WGTACW	2 cut(s)	2675, 2966
TauI	GCSGC	2 cut(s)	1551, 1683
TfiI	GAWTC	6 cut(s)	38, 1751, 1766, 2324, 2639, 2789
TscAI	CASTG	6 cut(s)	1719, 1873, 2132, 2713, 2841, 3082
TseFI	GTSAC	5 cut(s)	97, 532, 677, 2930, 3079
Tsp45I	GTSAC	5 cut(s)	97, 532, 677, 2930, 3079
TspGWI	ACGGA	3 cut(s)	437, 2899, 3001
TspRI	CASTG	6 cut(s)	1719, 1873, 2132, 2713, 2841, 3082
Van91I	CCANNNNNTGG	1 cut(s)	3130
Vha464I	CTTAAG	1 cut(s)	625
VneI	GTGCAC	1 cut(s)	336
VpaK11BI	GGWCC	4 cut(s)	104, 950, 1424, 1475
VspI	ATTAAT	1 cut(s)	1686
XapI	RAATTY	5 cut(s)	840, 866, 1303, 2054, 2559
XbaI	TCTAGA	2 cut(s)	1981, 2960
XceI	RCATGY	2 cut(s)	475, 2726
XcmI	CCANNNNNNNNNTGG	1 cut(s)	615
XhoI	CTCGAG	1 cut(s)	2875
XmiI	GTMKAC	1 cut(s)	3187
ZrmI	AGTACT	2 cut(s)	2677, 2968
Zsp2I	ATGCAT	1 cut(s)	1276

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.