FvH4_3g11960

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0006392
Physical Location & Seq
Forward (+)
7065937 .. 7070497
4561 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g11960.t2

Sequence Viewer

Length: 2538 bp
ATGGCTGCTTCTTCCTTACGAGAGTTACTTACAGAAGAAGCATATCATCGAGGGAACAACAACAAGGTCGTCGCCAAAACCAAAAAGCCAGTCAAATACAGAGTTGCTCCGGATGAGTCTCTGGCTTTGTTGCCTATACATATCTGCCATGATCGAAAAAGCTACGATTTCTCCAAGCACAAGGCTCAAAGCTCTGTTCTGCGAAAAGGGTCGTCTAGAAGAGTGAGTTCTACTTCAGAGAGGTCGCACACCAAGACGGTGGTCTCGGAAGGCAGTTCGAGAAGAACAGAGCCTGCAGCTATTGATGAAGTTGCCACTAAAGCTGTAGTGTCTATTCTCAGCGGATATGCGGGTCGTTATGTAAAGGATGAGGAGTTTAGAGAAGAGATTGAGGAGAAGTGTAGGGCTTGTTTGGCGAGGAAGAAAAGAGATTCGGATAATGGAGTGCTTGAGACTCTGGAATCGGGTGTCGAAAATGTTAACAAGTTGGTGCTGAATCCAGTTTTTTCGACGAAGGCAATGAGAAAATGTATTGAGAATTTGAGCAGAGTTGTTGCTTCTTTGGATGCCAACAAGTCCAAGATGAATGCTTCGACCTGCGGAATACCCAACTCAAATCTCTCTGCTTGTGCTCAGCTCTACTTGGCTATTGTTCACAAGATTGAGAGAAACGACTTGGTTTCTGCTAAGCATTTGCTTCAGGTTTTCTGTGACTCGCCGTCTTTAGCAAGAACTCATTTGCTTCCTGATCTATGGGAACATCTCTTTCTTCCACATCTTCTTCATCTGAAGATTTGGTACAGTCAGGAGATTGAGGTTGTTTCACACTCATTTGAGAAGGAGAAGAGAATGAAATCCATAACCAAAGTCTATAATGACCAAATGGATTTGGGGACTACAAAGTTTGCTCAATACTACAAAGAGTGGCTCAAAGTTGGGTCTGAGGCTCCTCCCGTTGCTCCTGAAGTACCTCTGCCTTTAGTACCATTTAGCAGATCAAGAAGAAGGAGAGCATCCGATTCTTCCGCGTCACATTCCTCATTGAACAAAAATTTATATCAGGCTGTATTTGGCTCAACACTCGAAAGGCGATCAGTGGGCCTTGATGATCGCCATGGAGTTTCCAATGCTTCTTGGGATGTAGATGAACAGGAGAAGCTGTATGAAGATGAAGCGAAGGCAGACAACTACAACAGTCTCAGTTGTGTTCATAGGGAGGACAGTACTATACGAAAATCATTGAGCCAAAATCATAGAAATCCAAAACCCGAGTTATGGCCCGAGTCTGATCAGACAAAGAAATCAGACTATTTTGGATTCTTTAGCTGCCAAAATGCACCTACTGAATGCTTGGTGAATAGGAATCTCATAGTTAAGAGTAATTCAGTCCAACAAGAAGACACTTCCCACCTTCCTTCTAGCAATTTAGGCAGTGCTATTAGCATTCTTTACTCGTCGGATAGTCTAAGTGATTGCGAAAGTGCAGTTCGTGCAATTACCAAAGCTTGGTTGGACTCTCATGGTGATCCTGTCATTGAAGCCATTTTATCCGAGCCACCGCTTATCCAGGGAATGCTGGAGGTGTTGTTTGCTTCCTCTAATGATGAAATCTTAGAGCTAGTAATATCGGTTTTAGCTGAATTTGTAGCAAGAAATGACCAGAATACAAAGATAATACTGAACTTTGATCCACAGCTTGAAATCTTCATGAGACTTCTAAGAAGTAGTGGTCTATTTTTGAAAGCAGCTGTTTTGCTTTACCTGTTGAAGCCAAAGGCAAAACAGATGAAATCACTTGAATGGGTGGCACTAGTCCTTCGAGTACTTGAGTTTGGAGACCAGTTGCAGACCCTATTCACCGTACGATGCAGCCCTCAGGCTGCAGCATTGTACCTTTTGGACCAGCTTCTTACAGGTTTTGATGAAGATCGGAACTTAGAGAATGCTAGACAGGTGGTTTCTCTAGGAGGGTTGAGCCTTCTAGTGAAACAAATTGAGAAAGGGGATACTCATGAGAGGAACAGTGTTGCTTCCATCATTTCATGCTGTGTTCGAGCTGATGGAAACTGTCGAAACTACTTAGCTGATTTTCTGGACAAGCCTTCACTTCTTGAACTCATTGTACTCGGAAATGGAAGCAACTCAACTTGTTCTGCATTTGCTCTATTGATTGAAATACTCTGCCTTAGTAGACGAACGAAGATCACTAAAATCCTAGATGGACTTAAAGAAGGATGCTGTGGCTTGAACACAATGCAAATTTTATTGGTCTATCTGCAGAGAGCTTCGGCCGAAGAGCGGCCCTTAGTTGCAGCCATATTGCTACAACTTGATCTTATGGAGAGGCATCAACAGAACATTGGCTTCTACAACAAGCAGGTTTCAGCTATTCGTCAAGGGATTCATTTCACTTCAGAGAAGGTTTTTTACACTCGAACGAAGACGAAGAAGCAACAGAAAATTGGCAAAGGAAAGCAGCCATTGTTTTGTTTAGAAGCGGTAACAAGAAATTATTGGTGGCCCTTTCGGATTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

846

Amino Acids

95.04

Weight (kDa)

8.67

Isoelectric Point (pI)

53.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_LIN PF23568 104 - 326 1.5e-91 E3 ubiquitin-protein ligase LIN-like, ARM repeat
ARM_LIN_2nd PF23654 473 - 634 6e-59 E3 ubiquitin-protein ligase LIN-like, ARM repeat
ARM_LIN_C PF23628 635 - 781 1.8e-51 Putative E3 ubiquitin-protein ligase LIN, ARM-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 605, 2368
AccB7I CCANNNNNTGG 1 cut(s) 1506
AccBSI CCGCTC 1 cut(s) 2299
AccI GTMKAC 1 cut(s) 2191
AccII CGCG 1 cut(s) 1028
AccIII TCCGGA 1 cut(s) 109
AciI CCGC 7 cut(s) 342, 350, 600, 1026, 1559, 2299, 2498
AclWI GGATC 2 cut(s) 1520, 1682
AcoI YGGCCR 1 cut(s) 2289
AcsI RAATTY 4 cut(s) 538, 1051, 1640, 2259
AcuI CTGAAG 5 cut(s) 219, 683, 809, 984, 2397
AfaI GTAC 8 cut(s) 800, 969, 984, 1225, 1824, 1863, 1892, 2124
AfiI CCNNNNNNNGG 3 cut(s) 1275, 1506, 2298
AgsI TTSAA 9 cut(s) 1045, 1538, 1700, 1741, 1768, 1799, 2114, 2174, 2248
AhdI GACNNNNNGTC 1 cut(s) 718
AhlI ACTAGT 1 cut(s) 1810
AjnI CCWGG 1 cut(s) 1566
Alw21I GWGCWC 1 cut(s) 634
Alw26I GTCTC 6 cut(s) 123, 268, 446, 1202, 1705, 1830
AlwI GGATC 2 cut(s) 1520, 1682
AlwNI CAGNNNCTG 1 cut(s) 293
Ama87I CYCGRG 2 cut(s) 1268, 1280
Aor13HI TCCGGA 1 cut(s) 109
AoxI GGCC 5 cut(s) 1099, 1277, 2289, 2300, 2519
ApeKI GCWGC 9 cut(s) 5, 296, 1326, 1745, 1869, 1880, 1883, 2312, 2476
ApoI RAATTY 4 cut(s) 538, 1051, 1640, 2259
ArsI GACNNNNNNTTYG 2 cut(s) 75, 107
AspS9I GGNCC 5 cut(s) 1099, 1278, 1900, 2301, 2520
AsuHPI GGTGA 3 cut(s) 1366, 1535, 1849
AvaI CYCGRG 2 cut(s) 1268, 1280
AvaII GGWCC 1 cut(s) 1900
AxyI CCTNAGG 1 cut(s) 1875
BarI GAAGNNNNNNTAC 4 cut(s) 782, 814, 2411, 2443
BbsI GAAGAC 2 cut(s) 1404, 2447
Bbv12I GWGCWC 1 cut(s) 634
BbvI GCAGC 8 cut(s) 308, 1313, 1757, 1867, 1881, 1895, 2324, 2488
BccI CCATC 3 cut(s) 2042, 2054, 2213
BceAI ACGGC 1 cut(s) 703
BciT130I CCWGG 1 cut(s) 1568
BciVI GTATCC 1 cut(s) 1999
BclI TGATCA 1 cut(s) 1288
BcoDI GTCTC 6 cut(s) 123, 268, 446, 1202, 1705, 1830
BcuI ACTAGT 1 cut(s) 1810
BfaI CTAG 8 cut(s) 216, 1419, 1619, 1811, 1947, 1964, 1982, 2216
BfmI CTRYAG 4 cut(s) 294, 324, 1881, 2276
BfuAI ACCTGC 2 cut(s) 605, 2368
BfuI GTATCC 1 cut(s) 1999
BlpI GCTNAGC 2 cut(s) 633, 687
BmcAI AGTACT 2 cut(s) 1225, 1824
Bme1390I CCNGG 1 cut(s) 1568
Bme18I GGWCC 1 cut(s) 1900
BmeRI GACNNNNNGTC 1 cut(s) 718
BmeT110I CYCGRG 2 cut(s) 1268, 1280
BmgT120I GGNCC 5 cut(s) 1099, 1278, 1900, 2301, 2520
BmiI GGNNCC 1 cut(s) 948
BmrFI CCNGG 1 cut(s) 1568
BmsI GCATC 5 cut(s) 556, 1022, 1856, 2225, 2356
BoxI GACNNNNGTC 1 cut(s) 260
BpiI GAAGAC 2 cut(s) 1404, 2447
BpmI CTGGAG 1 cut(s) 1598
Bpu1102I GCTNAGC 2 cut(s) 633, 687
BpuEI CTTGAG 2 cut(s) 470, 1847
BsaBI GATNNNNATC 1 cut(s) 1926
BsaI GGTCTC 2 cut(s) 268, 1830
BsaJI CCNNGG 2 cut(s) 1114, 1567
BsaWI WCCGGW 1 cut(s) 109
BsaXI ACNNNNNCTCC 6 cut(s) 155, 185, 1145, 1175, 1571, 1601
Bsc4I CCNNNNNNNGG 3 cut(s) 1275, 1506, 2298
Bse1I ACTGG 3 cut(s) 89, 500, 1840
Bse21I CCTNAGG 1 cut(s) 1875
Bse3DI GCAATG 1 cut(s) 525
Bse8I GATNNNNATC 1 cut(s) 1926
BseAI TCCGGA 1 cut(s) 109
BseBI CCWGG 1 cut(s) 1568
BseDI CCNNGG 2 cut(s) 1114, 1567
BseGI GGATG 6 cut(s) 118, 373, 571, 1013, 1144, 2240
BseJI GATNNNNATC 1 cut(s) 1926
BseLI CCNNNNNNNGG 3 cut(s) 1275, 1506, 2298
BseMI GCAATG 1 cut(s) 525
BseMII CTCAG 5 cut(s) 352, 647, 933, 1213, 1889
BseNI ACTGG 3 cut(s) 89, 500, 1840
BseRI GAGGAG 3 cut(s) 386, 407, 939
BseX3I CGGCCG 1 cut(s) 2289
BseXI GCAGC 8 cut(s) 308, 1313, 1757, 1867, 1881, 1895, 2324, 2488
BsgI GTGCAG 1 cut(s) 1503
Bsh1236I CGCG 1 cut(s) 1028
Bsh1285I CGRYCG 1 cut(s) 2292
BshFI GGCC 5 cut(s) 1101, 1279, 2291, 2302, 2521
BsiEI CGRYCG 1 cut(s) 2292
BsiHKAI GWGCWC 1 cut(s) 634
BsiHKCI CYCGRG 2 cut(s) 1268, 1280
BsiSI CCGG 1 cut(s) 110
BsiWI CGTACG 1 cut(s) 1861
BslFI GGGAC 1 cut(s) 907
BslI CCNNNNNNNGG 3 cut(s) 1275, 1506, 2298
BsmAI GTCTC 6 cut(s) 123, 268, 446, 1202, 1705, 1830
BsmFI GGGAC 1 cut(s) 907
BsmI GAATGC 5 cut(s) 592, 1352, 1443, 1578, 1948
BsnI GGCC 5 cut(s) 1101, 1279, 2291, 2302, 2521
Bso31I GGTCTC 2 cut(s) 268, 1830
BsoBI CYCGRG 2 cut(s) 1268, 1280
Bsp1286I GDGCHC 1 cut(s) 634
Bsp13I TCCGGA 1 cut(s) 109
Bsp1720I GCTNAGC 2 cut(s) 633, 687
Bsp19I CCATGG 1 cut(s) 1114
BspACI CCGC 7 cut(s) 342, 350, 600, 1026, 1559, 2299, 2498
BspANI GGCC 5 cut(s) 1101, 1279, 2291, 2302, 2521
BspCNI CTCAG 5 cut(s) 351, 646, 934, 1212, 1888
BspEI TCCGGA 1 cut(s) 109
BspFNI CGCG 1 cut(s) 1028
BspHI TCATGA 2 cut(s) 1707, 2011
BspLI GGNNCC 1 cut(s) 948
BspMAI CTGCAG 3 cut(s) 298, 1885, 2280
BspMI ACCTGC 2 cut(s) 605, 2368
BspPI GGATC 2 cut(s) 1520, 1682
BspQI GCTCTTC 1 cut(s) 2289
BspTNI GGTCTC 2 cut(s) 268, 1830
BsrBI CCGCTC 1 cut(s) 2299
BsrDI GCAATG 1 cut(s) 525
BsrI ACTGG 3 cut(s) 89, 500, 1840
BssECI CCNNGG 2 cut(s) 1114, 1567
BssT1I CCWWGG 1 cut(s) 1114
Bst2UI CCWGG 1 cut(s) 1568
Bst4CI ACNGT 7 cut(s) 259, 803, 1196, 1223, 1861, 2024, 2069
Bst6I CTCTTC 4 cut(s) 214, 378, 839, 2289
BstAPI GCANNNNNTGC 1 cut(s) 1490
BstC8I GCNNGC 1 cut(s) 294
BstDSI CCRYGG 1 cut(s) 1114
BstF5I GGATG 6 cut(s) 118, 373, 571, 1013, 1144, 2240
BstFNI CGCG 1 cut(s) 1028
BstMAI GTCTC 6 cut(s) 123, 268, 446, 1202, 1705, 1830
BstMCI CGRYCG 1 cut(s) 2292
BstMWI GCNNNNNNNGC 4 cut(s) 320, 413, 1428, 1490
BstNI CCWGG 1 cut(s) 1568
BstPAI GACNNNNGTC 1 cut(s) 260
BstSCI CCNGG 1 cut(s) 1566
BstSFI CTRYAG 4 cut(s) 294, 324, 1881, 2276
BstUI CGCG 1 cut(s) 1028
BstV1I GCAGC 8 cut(s) 308, 1313, 1757, 1867, 1881, 1895, 2324, 2488
BstV2I GAAGAC 2 cut(s) 1404, 2447
BstXI CCANNNNNNTGG 1 cut(s) 259
BstZI CGGCCG 1 cut(s) 2289
Bsu36I CCTNAGG 1 cut(s) 1875
BsuI GTATCC 1 cut(s) 1999
BsuRI GGCC 5 cut(s) 1101, 1279, 2291, 2302, 2521
BtgI CCRYGG 1 cut(s) 1114
BtsCI GGATG 6 cut(s) 118, 373, 571, 1013, 1144, 2240
BtsI GCAGTG 1 cut(s) 1438
BtsIMutI CAGTG 3 cut(s) 1101, 1438, 2029
BveI ACCTGC 2 cut(s) 605, 2368
Cac8I GCNNGC 1 cut(s) 294
CaiI CAGNNNCTG 1 cut(s) 293
CciI TCATGA 2 cut(s) 1707, 2011
Cfr13I GGNCC 5 cut(s) 1099, 1278, 1900, 2301, 2520
CseI GACGC 1 cut(s) 1017
Csp6I GTAC 8 cut(s) 799, 968, 983, 1224, 1823, 1862, 1891, 2123
CviAII CATG 6 cut(s) 149, 1115, 1520, 1708, 2012, 2043
CviQI GTAC 8 cut(s) 799, 968, 983, 1224, 1823, 1862, 1891, 2123
DriI GACNNNNNGTC 1 cut(s) 718
EaeI YGGCCR 1 cut(s) 2289
EagI CGGCCG 1 cut(s) 2289
Eam1104I CTCTTC 4 cut(s) 214, 378, 839, 2289
Eam1105I GACNNNNNGTC 1 cut(s) 718
EarI CTCTTC 4 cut(s) 214, 378, 839, 2289
EclXI CGGCCG 1 cut(s) 2289
Eco130I CCWWGG 1 cut(s) 1114
Eco31I GGTCTC 2 cut(s) 268, 1830
Eco47I GGWCC 1 cut(s) 1900
Eco52I CGGCCG 1 cut(s) 2289
Eco57I CTGAAG 5 cut(s) 219, 683, 809, 984, 2397
Eco81I CCTNAGG 1 cut(s) 1875
Eco88I CYCGRG 2 cut(s) 1268, 1280
EcoRII CCWGG 1 cut(s) 1566
EcoT14I CCWWGG 1 cut(s) 1114
ErhI CCWWGG 1 cut(s) 1114
FaeI CATG 6 cut(s) 152, 1118, 1523, 1711, 2015, 2046
FaqI GGGAC 1 cut(s) 907
FatI CATG 6 cut(s) 148, 1114, 1519, 1707, 2011, 2042
FauI CCCGC 1 cut(s) 343
FbaI TGATCA 1 cut(s) 1288
FblI GTMKAC 1 cut(s) 2191
FokI GGATG 6 cut(s) 125, 380, 578, 1000, 1151, 2247
FspBI CTAG 8 cut(s) 216, 1419, 1619, 1811, 1947, 1964, 1982, 2216
GsuI CTGGAG 1 cut(s) 1598
HaeIII GGCC 5 cut(s) 1101, 1279, 2291, 2302, 2521
HapII CCGG 1 cut(s) 110
HgaI GACGC 1 cut(s) 1017
Hin1II CATG 6 cut(s) 152, 1118, 1523, 1711, 2015, 2046
HincII GTYRAC 1 cut(s) 481
HindII GTYRAC 1 cut(s) 481
HindIII AAGCTT 1 cut(s) 1503
HpaI GTTAAC 1 cut(s) 481
HpaII CCGG 1 cut(s) 110
HphI GGTGA 3 cut(s) 1366, 1535, 1849
Hpy166II GTNNAC 3 cut(s) 481, 655, 2192
Hpy8I GTNNAC 3 cut(s) 481, 655, 2192
Hpy99I CGWCG 3 cut(s) 74, 514, 1459
HpyCH4III ACNGT 7 cut(s) 259, 803, 1196, 1223, 1861, 2024, 2069
HpyF10VI GCNNNNNNNGC 4 cut(s) 320, 413, 1428, 1490
Hsp92II CATG 6 cut(s) 152, 1118, 1523, 1711, 2015, 2046
Kpn2I TCCGGA 1 cut(s) 109
Ksp22I TGATCA 1 cut(s) 1288
KspAI GTTAAC 1 cut(s) 481
LguI GCTCTTC 1 cut(s) 2289
LmnI GCTCC 3 cut(s) 112, 952, 964
Lsp1109I GCAGC 8 cut(s) 308, 1313, 1757, 1867, 1881, 1895, 2324, 2488
LweI GCATC 5 cut(s) 556, 1022, 1856, 2225, 2356
MaeI CTAG 8 cut(s) 216, 1419, 1619, 1811, 1947, 1964, 1982, 2216
MaeIII GTNAC 4 cut(s) 24, 710, 1029, 2500
MbiI CCGCTC 1 cut(s) 2299
MhlI GDGCHC 1 cut(s) 634
MlyI GAGTC 5 cut(s) 125, 448, 707, 1292, 1508
MmeI TCCRAC 3 cut(s) 1414, 1437, 1491
MroI TCCGGA 1 cut(s) 109
MseI TTAA 3 cut(s) 480, 1374, 2226
MslI CAYNNNNRTG 1 cut(s) 1798
MspA1I CMGCKG 2 cut(s) 342, 1748
MspI CCGG 1 cut(s) 110
MspR9I CCNGG 1 cut(s) 1568
Mva1269I GAATGC 5 cut(s) 592, 1352, 1443, 1578, 1948
MvaI CCWGG 1 cut(s) 1568
MvnI CGCG 1 cut(s) 1028
MwoI GCNNNNNNNGC 4 cut(s) 320, 413, 1428, 1490
NcoI CCATGG 1 cut(s) 1114
NlaIII CATG 6 cut(s) 152, 1118, 1523, 1711, 2015, 2046
NlaIV GGNNCC 1 cut(s) 948
NmuCI GTSAC 2 cut(s) 710, 1029
PagI TCATGA 2 cut(s) 1707, 2011
PciSI GCTCTTC 1 cut(s) 2289
PctI GAATGC 5 cut(s) 592, 1352, 1443, 1578, 1948
PfeI GAWTC 8 cut(s) 431, 461, 496, 1019, 1317, 1363, 2401, 2530
Pfl23II CGTACG 1 cut(s) 1861
PflMI CCANNNNNTGG 1 cut(s) 1506
PleI GAGTC 5 cut(s) 124, 448, 707, 1291, 1508
PpsI GAGTC 5 cut(s) 124, 448, 707, 1291, 1508
PshAI GACNNNNGTC 1 cut(s) 260
Psp6I CCWGG 1 cut(s) 1566
PspGI CCWGG 1 cut(s) 1566
PspLI CGTACG 1 cut(s) 1861
PspN4I GGNNCC 1 cut(s) 948
PspPI GGNCC 5 cut(s) 1099, 1278, 1900, 2301, 2520
PsrI GAACNNNNNNTAC 2 cut(s) 2106, 2138
PstI CTGCAG 3 cut(s) 298, 1885, 2280
PstNI CAGNNNCTG 1 cut(s) 293
PvuII CAGCTG 1 cut(s) 1748
RsaI GTAC 8 cut(s) 800, 969, 984, 1225, 1824, 1863, 1892, 2124
RsaNI GTAC 8 cut(s) 799, 968, 983, 1224, 1823, 1862, 1891, 2123
RseI CAYNNNNRTG 1 cut(s) 1798
SapI GCTCTTC 1 cut(s) 2289
SaqAI TTAA 3 cut(s) 480, 1374, 2226
Sau96I GGNCC 5 cut(s) 1099, 1278, 1900, 2301, 2520
ScaI AGTACT 2 cut(s) 1225, 1824
SchI GAGTC 5 cut(s) 125, 448, 707, 1292, 1508
ScrFI CCNGG 1 cut(s) 1568
SduI GDGCHC 1 cut(s) 634
SfaNI GCATC 5 cut(s) 556, 1022, 1856, 2225, 2356
SfcI CTRYAG 4 cut(s) 294, 324, 1881, 2276
SinI GGWCC 1 cut(s) 1900
SmiMI CAYNNNNRTG 1 cut(s) 1798
SmlI CTYRAG 2 cut(s) 449, 1826
SmoI CTYRAG 2 cut(s) 449, 1826
SpeI ACTAGT 1 cut(s) 1810
SsiI CCGC 7 cut(s) 342, 350, 600, 1026, 1559, 2299, 2498
SspMI CTAG 8 cut(s) 216, 1419, 1619, 1811, 1947, 1964, 1982, 2216
StyD4I CCNGG 1 cut(s) 1566
StyI CCWWGG 1 cut(s) 1114
TaaI ACNGT 7 cut(s) 259, 803, 1196, 1223, 1861, 2024, 2069
TatI WGTACW 3 cut(s) 1223, 1822, 2122
TauI GCSGC 1 cut(s) 2302
TfiI GAWTC 8 cut(s) 431, 461, 496, 1019, 1317, 1363, 2401, 2530
Tru1I TTAA 3 cut(s) 480, 1374, 2226
Tru9I TTAA 3 cut(s) 480, 1374, 2226
TscAI CASTG 3 cut(s) 1101, 1438, 2029
TseFI GTSAC 2 cut(s) 710, 1029
TseI GCWGC 9 cut(s) 5, 296, 1326, 1745, 1869, 1880, 1883, 2312, 2476
Tsp45I GTSAC 2 cut(s) 710, 1029
TspRI CASTG 3 cut(s) 1101, 1438, 2029
Van91I CCANNNNNTGG 1 cut(s) 1506
VpaK11BI GGWCC 1 cut(s) 1900
XapI RAATTY 4 cut(s) 538, 1051, 1640, 2259
XbaI TCTAGA 1 cut(s) 215
XcmI CCANNNNNNNNNTGG 1 cut(s) 1507
XmiI GTMKAC 1 cut(s) 2191
XspI CTAG 8 cut(s) 216, 1419, 1619, 1811, 1947, 1964, 1982, 2216
ZrmI AGTACT 2 cut(s) 1225, 1824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.