MD10G1236600.v1.1

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0006392
Physical Location & Seq
Reverse (-)
33303569 .. 33306485
2917 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1236600.v1.1.491

Sequence Viewer

Length: 2382 bp
ATGGCTTCCTTGAAGGAACTGCTCACCCAAGAACGAGTCGGACTAGAAAAAAATAAGTACCCGAAAGGCCAGAAACCATTGATGTACAGAGAAAGAGATGAACTTACGGCTCTATTTCTGCCTGTGCACATCTGCCAGGATCGAAAAAGTTACGATTTTCCGCACCACAAGGCTCGGACGCGAAAAGGGTCGTCGAGGAGGGTGAGTACTACTTCGGAGAGGTCGAATTCCAAGTCATTGGTTTCGGAGAGTTCGATGGCTAGTGAGCCTGCTGCCATTGATGAAGTTACCACTAGAGCTGTGGTTTCGATACTTAGCGGTTATGTTGGGAGGTATGTGAAGGATGAGGGTTTTCGGGAAACAATCCGCGAAAAGTGCAGGGCTTGCTTGGTGAGAAAGAAAAAGGATCTGGATAATGGGATGTTGGGAAACTTGGAACTGGGTATTGAAAGTGTTGATAAGTTGGTGGAAGATCAATGGTCGGAAAGTATGGAAGTTAGGACGAAAAAAGTGAAGAATACGATTCGGGTTTTGAACGTTGTTGGTTCCTCAAAATCTAGCAATTCTCATCTCTCTGCTTGTGCTCAACTCTACTTGTCGATCGTTCACAAGATTGAGAAAAATGACCGGCTTTCGGCGAGGCAATTGCTTCAAGTGTTCTGTGATTCAGCGAGTTTGGCAAGAACACATTTTCTTCCTGATCTTTGGGAGCATTTCTTTCTTCCACATCTTTTACATGTGAAGATTTGGTATGCCAGGGAAATGGATGTTCTTTCGAGCTCAGAGGACGGCGAGAAGGAGAAGAAAATGAAAGCCGTGGCAAGAGCGTACGATGAACAAATGGATATGGGAACTACAAGGTTTGCTTTGTACTACAAAGAGTGGCTTCAAGTTGGAGCTGAGGCCCGTCCTGTTCCTCCTACTATACCTTTGCCTTCTTCGATACGCAGTTGCAGATCATCAAGAAGGAGATCATCGGATTCTTACACTTCACATTCCTCGCTCAACAAAAATTTATACCACGCTGTGTTTGGCCCCGCGCTTGAGCGAAAATCTGTGGAGCTCAATCATCGAAATGGAGTTTTGAACGATACTTGGGGTCTAGATGAGGTGGAAAAGTTGTGTGTAGATGAAGATGATTACAACCATCTCGGTTATGTTCATAGTGGAGAAAGGTCTAGTCGGAGAAGGTCATCAAGCGAAAATCATAGAAATCCAGTAATCGCGCTATGGCCTGAGTCGGAGGCACAGAAGACGGGCCATTTTGGATTCTTTAGATGCCAGAATGCACCAACAGAATGCTTGGTGAACAAGAACCTCATGGTCAAGAACAATTCAATCCGTAACCAAGATAACTCCCATCTTCCACCTCTAAGCAACTTAAGCCGGGCTATTAGCACTATCTACTCCTCCGATAATCTAAGCGATTGCGAAAGTGCAATTCGTGTGATTACCAAGGCTTGGTTGGACTCCCATGGTGATCCTGTCATTGAGGTTGAGCTATCAAAGCCACCTGTTATTCAGGGAATGCTGGAGGTGTTGTTTGTTTCTAGTAATGACGAAATTTTGGAATTAGTAATCTCGGTTTTAGCTGAATTTGTAGCGAGAAACAAGATGATTAGACATATCATACTGAACTCGGATCCACAGCTTGAGTTTCTTATGAGACTTCTAAAAAGCAGTGGTCTATTTTTGAAAGCTGCAATTCTGCTTTACTTGTTGAAGCCAAAGGCAAAACAGATGATATCTGTCGGATGGGTGGCACTAGTCCTTCGAGTACTAGAGTTTGGAGATCAGTTGCAGACGCTATTCACAGTTCGTTGCAGTCCTCAAGTGGCGGCGTTGTACCTTTTAGACCAGCTTCTTACTGGTTTTGATGAAGACCGAAACTTGGAGAATGCAAGAGAGGTAGTTTCTCTTGGAGGGTTGAGCCTTCTGGTGACAAAAATCGAGAGAGGGGAAACTCGTGAGAGGAACAACGTTGCTTCAGTCATTGCACGTTGTGTTCGAGCTGATGGAAGCTGTCGAAACTACTTGGCTGATTTTCTCAACAAGGCTTCTCTTCTTGAACTCATTGTACTTGGAAATGGTACTGGCTCCGCATTCGCTTTGTTGATCGAAATACTATGCCTTAGTAGACGAACAAAAATCACTGAAATCCTAAATGGACTGAAAGAAGGATCCGGCGGCGTTAACACAATGCAGATTTTGTTGGTCTATCTGCAGAGAGCTCCACTTGAAGAACGCCCGTTGATTGCAGTCGTTTTACTTCAGCTTGATCTTATGGTAAATCCGTCCTTCGTGATTACGCAACTTTCTCGTAGAAATTGTAAAATCTTTCTAAACTCATTTCAACTTCTGGCAACCAAACTGTTCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

794

Amino Acids

89.59

Weight (kDa)

8.97

Isoelectric Point (pI)

47.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_LIN PF23568 97 - 313 3.4e-88 E3 ubiquitin-protein ligase LIN-like, ARM repeat
ARM_LIN_2nd PF23654 458 - 619 3.9e-59 E3 ubiquitin-protein ligase LIN-like, ARM repeat
ARM_LIN_C PF23628 620 - 766 3.5e-52 Putative E3 ubiquitin-protein ligase LIN, ARM-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1461
AccI GTMKAC 1 cut(s) 2137
AccII CGCG 4 cut(s) 181, 369, 1040, 1226
AciI CCGC 7 cut(s) 161, 318, 367, 1038, 1838, 2100, 2187
AclI AACGTT 2 cut(s) 537, 1980
AclWI GGATC 7 cut(s) 147, 414, 1475, 1637, 1650, 2175, 2188
AcsI RAATTY 4 cut(s) 226, 1012, 1563, 1595
AcuI CTGAAG 2 cut(s) 1971, 2255
AdeI CACNNNGTG 2 cut(s) 1027, 2003
AfaI GTAC 9 cut(s) 59, 86, 208, 830, 872, 1779, 1847, 2079, 2092
AfiI CCNNNNNNNGG 3 cut(s) 634, 1461, 1891
AflII CTTAAG 1 cut(s) 1381
AflIII ACRYGT 1 cut(s) 736
AhlI ACTAGT 1 cut(s) 1765
AjnI CCWGG 2 cut(s) 135, 755
Alw21I GWGCWC 5 cut(s) 129, 586, 782, 1065, 2233
Alw26I GTCTC 1 cut(s) 1660
Alw44I GTGCAC 1 cut(s) 125
AlwI GGATC 7 cut(s) 147, 414, 1475, 1637, 1650, 2175, 2188
AoxI GGCC 5 cut(s) 67, 903, 1033, 1232, 1258
ApaLI GTGCAC 1 cut(s) 125
ApeKI GCWGC 2 cut(s) 272, 1700
ApoI RAATTY 4 cut(s) 226, 1012, 1563, 1595
ArsI GACNNNNNNTTYG 2 cut(s) 218, 250
AspLEI GCGC 2 cut(s) 1042, 1228
AspS9I GGNCC 3 cut(s) 904, 1034, 1258
AsuC2I CCSGG 1 cut(s) 1388
AsuHPI GGTGA 6 cut(s) 16, 214, 403, 1318, 1490, 1951
BaeGI GKGCMC 1 cut(s) 129
BamHI GGATCC 2 cut(s) 1642, 2180
BanII GRGCYC 3 cut(s) 782, 1065, 2233
BauI CACGAG 1 cut(s) 1965
BbsI GAAGAC 2 cut(s) 1259, 1887
Bbv12I GWGCWC 5 cut(s) 129, 586, 782, 1065, 2233
BbvCI CCTCAGC 1 cut(s) 900
BbvI GCAGC 2 cut(s) 259, 1687
BccI CCATC 5 cut(s) 250, 1155, 1368, 1749, 2009
BceAI ACGGC 3 cut(s) 123, 800, 805
BcgI CGANNNNNNTGC 4 cut(s) 628, 662, 2300, 2334
BciT130I CCWGG 2 cut(s) 137, 757
BcnI CCSGG 1 cut(s) 1388
BcoDI GTCTC 1 cut(s) 1660
BcuI ACTAGT 1 cut(s) 1765
BfaI CTAG 9 cut(s) 44, 261, 294, 558, 1103, 1179, 1551, 1766, 1781
BfmI CTRYAG 1 cut(s) 2222
BfrI CTTAAG 1 cut(s) 1381
BisI GCNGC 4 cut(s) 273, 1701, 1839, 2188
BlsI GCNGC 4 cut(s) 274, 1702, 1840, 2189
BmcAI AGTACT 2 cut(s) 208, 1779
Bme1390I CCNGG 3 cut(s) 137, 757, 1388
BmgT120I GGNCC 3 cut(s) 904, 1034, 1258
BmiI GGNNCC 5 cut(s) 547, 1036, 1644, 2098, 2182
BmrFI CCNGG 3 cut(s) 137, 757, 1388
BmrI ACTGGG 1 cut(s) 449
BmsI GCATC 1 cut(s) 1268
BmuI ACTGGG 1 cut(s) 449
BpiI GAAGAC 2 cut(s) 1259, 1887
BpmI CTGGAG 1 cut(s) 1553
Bpu10I CCTNAGC 1 cut(s) 900
BpuEI CTTGAG 3 cut(s) 1064, 1673, 1815
BpuMI CCSGG 1 cut(s) 1388
BsaJI CCNNGG 4 cut(s) 756, 816, 1455, 1474
BsaXI ACNNNNNCTCC 4 cut(s) 190, 220, 1526, 1556
Bsc4I CCNNNNNNNGG 3 cut(s) 634, 1461, 1891
Bse118I RCCGGY 1 cut(s) 627
Bse1I ACTGG 4 cut(s) 444, 1217, 1873, 2098
Bse3DI GCAATG 1 cut(s) 1992
BseBI CCWGG 2 cut(s) 137, 757
BseDI CCNNGG 4 cut(s) 756, 816, 1455, 1474
BseGI GGATG 4 cut(s) 349, 426, 772, 1760
BseLI CCNNNNNNNGG 3 cut(s) 634, 1461, 1891
BseMI GCAATG 1 cut(s) 1992
BseMII CTCAG 3 cut(s) 795, 891, 1227
BseNI ACTGG 4 cut(s) 444, 1217, 1873, 2098
BseRI GAGGAG 2 cut(s) 211, 1399
BseSI GKGCMC 1 cut(s) 129
BseXI GCAGC 2 cut(s) 259, 1687
BsgI GTGCAG 1 cut(s) 397
Bsh1236I CGCG 4 cut(s) 181, 369, 1040, 1226
Bsh1285I CGRYCG 1 cut(s) 603
BshFI GGCC 5 cut(s) 69, 905, 1035, 1234, 1260
BsiEI CGRYCG 1 cut(s) 603
BsiHKAI GWGCWC 5 cut(s) 129, 586, 782, 1065, 2233
BsiSI CCGG 3 cut(s) 628, 1387, 2184
BsiWI CGTACG 1 cut(s) 828
BslI CCNNNNNNNGG 3 cut(s) 634, 1461, 1891
BsmAI GTCTC 1 cut(s) 1660
BsmI GAATGC 5 cut(s) 1291, 1304, 1533, 1903, 2102
BsnI GGCC 5 cut(s) 69, 905, 1035, 1234, 1260
Bsp1286I GDGCHC 5 cut(s) 129, 586, 782, 1065, 2233
Bsp1407I TGTACA 1 cut(s) 84
Bsp19I CCATGG 1 cut(s) 1474
BspACI CCGC 7 cut(s) 161, 318, 367, 1038, 1838, 2100, 2187
BspANI GGCC 5 cut(s) 69, 905, 1035, 1234, 1260
BspCNI CTCAG 3 cut(s) 794, 892, 1228
BspFNI CGCG 4 cut(s) 181, 369, 1040, 1226
BspLI GGNNCC 5 cut(s) 547, 1036, 1644, 2098, 2182
BspMAI CTGCAG 1 cut(s) 2226
BspPI GGATC 7 cut(s) 147, 414, 1475, 1637, 1650, 2175, 2188
BspTI CTTAAG 1 cut(s) 1381
BsrDI GCAATG 1 cut(s) 1992
BsrFI RCCGGY 1 cut(s) 627
BsrGI TGTACA 1 cut(s) 84
BsrI ACTGG 4 cut(s) 444, 1217, 1873, 2098
BssAI RCCGGY 1 cut(s) 627
BssECI CCNNGG 4 cut(s) 756, 816, 1455, 1474
BssSI CACGAG 1 cut(s) 1965
BssT1I CCWWGG 2 cut(s) 1455, 1474
Bst2BI CACGAG 1 cut(s) 1965
Bst2UI CCWGG 2 cut(s) 137, 757
Bst4CI ACNGT 2 cut(s) 1816, 2373
Bst6I CTCTTC 1 cut(s) 2067
BstAFI CTTAAG 1 cut(s) 1381
BstAPI GCANNNNNTGC 1 cut(s) 384
BstAUI TGTACA 1 cut(s) 84
BstC8I GCNNGC 2 cut(s) 270, 385
BstDEI CTNAG 7 cut(s) 314, 781, 900, 1236, 1373, 1421, 2132
BstDSI CCRYGG 2 cut(s) 816, 1474
BstF5I GGATG 4 cut(s) 349, 426, 772, 1760
BstFNI CGCG 4 cut(s) 181, 369, 1040, 1226
BstHHI GCGC 2 cut(s) 1042, 1228
BstMAI GTCTC 1 cut(s) 1660
BstMCI CGRYCG 1 cut(s) 603
BstMWI GCNNNNNNNGC 5 cut(s) 375, 384, 677, 1383, 1507
BstNI CCWGG 2 cut(s) 137, 757
BstNSI RCATGY 1 cut(s) 740
BstSCI CCNGG 3 cut(s) 135, 755, 1386
BstSFI CTRYAG 1 cut(s) 2222
BstSLI GKGCMC 1 cut(s) 129
BstUI CGCG 4 cut(s) 181, 369, 1040, 1226
BstV1I GCAGC 2 cut(s) 259, 1687
BstV2I GAAGAC 2 cut(s) 1259, 1887
BstX2I RGATCY 3 cut(s) 406, 1642, 2180
BstXI CCANNNNNNTGG 2 cut(s) 238, 763
BstYI RGATCY 3 cut(s) 406, 1642, 2180
BsuRI GGCC 5 cut(s) 69, 905, 1035, 1234, 1260
BtgI CCRYGG 2 cut(s) 816, 1474
BtsCI GGATG 4 cut(s) 349, 426, 772, 1760
BtsI GCAGTG 1 cut(s) 1687
BtsIMutI CAGTG 2 cut(s) 1687, 2151
Cac8I GCNNGC 2 cut(s) 270, 385
CfoI GCGC 2 cut(s) 1042, 1228
Cfr10I RCCGGY 1 cut(s) 627
Cfr13I GGNCC 3 cut(s) 904, 1034, 1258
CseI GACGC 2 cut(s) 187, 1813
Csp6I GTAC 9 cut(s) 58, 85, 207, 829, 871, 1778, 1846, 2078, 2091
CviAII CATG 3 cut(s) 737, 1321, 1475
CviQI GTAC 9 cut(s) 58, 85, 207, 829, 871, 1778, 1846, 2078, 2091
DdeI CTNAG 7 cut(s) 314, 781, 900, 1236, 1373, 1421, 2132
DraIII CACNNNGTG 2 cut(s) 1027, 2003
Eam1104I CTCTTC 1 cut(s) 2067
EarI CTCTTC 1 cut(s) 2067
Ecl136II GAGCTC 3 cut(s) 780, 1063, 2231
Eco130I CCWWGG 2 cut(s) 1455, 1474
Eco24I GRGCYC 3 cut(s) 782, 1065, 2233
Eco32I GATATC 1 cut(s) 1746
Eco53kI GAGCTC 3 cut(s) 780, 1063, 2231
Eco57I CTGAAG 2 cut(s) 1971, 2255
EcoICRI GAGCTC 3 cut(s) 780, 1063, 2231
EcoRI GAATTC 1 cut(s) 226
EcoRII CCWGG 2 cut(s) 135, 755
EcoRV GATATC 1 cut(s) 1746
EcoT14I CCWWGG 2 cut(s) 1455, 1474
EcoT38I GRGCYC 3 cut(s) 782, 1065, 2233
ErhI CCWWGG 2 cut(s) 1455, 1474
FaeI CATG 3 cut(s) 740, 1324, 1478
FalI AAGNNNNNCTT 4 cut(s) 850, 882, 870, 902
FatI CATG 3 cut(s) 736, 1320, 1474
FauI CCCGC 1 cut(s) 1045
FblI GTMKAC 1 cut(s) 2137
Fnu4HI GCNGC 4 cut(s) 273, 1701, 1839, 2188
FokI GGATG 4 cut(s) 356, 433, 779, 1767
FriOI GRGCYC 3 cut(s) 782, 1065, 2233
Fsp4HI GCNGC 4 cut(s) 273, 1701, 1839, 2188
FspBI CTAG 9 cut(s) 44, 261, 294, 558, 1103, 1179, 1551, 1766, 1781
GlaI GCGC 2 cut(s) 1041, 1227
GluI GCNGC 4 cut(s) 273, 1701, 1839, 2188
GsuI CTGGAG 1 cut(s) 1553
HaeIII GGCC 5 cut(s) 69, 905, 1035, 1234, 1260
HapII CCGG 3 cut(s) 628, 1387, 2184
HgaI GACGC 2 cut(s) 187, 1813
HhaI GCGC 2 cut(s) 1042, 1228
Hin1II CATG 3 cut(s) 740, 1324, 1478
Hin6I GCGC 2 cut(s) 1040, 1226
HinP1I GCGC 2 cut(s) 1040, 1226
HincII GTYRAC 1 cut(s) 2194
HindII GTYRAC 1 cut(s) 2194
HinfI GANTC 7 cut(s) 36, 523, 665, 980, 1238, 1269, 1469
HpaI GTTAAC 1 cut(s) 2194
HpaII CCGG 3 cut(s) 628, 1387, 2184
HphI GGTGA 6 cut(s) 16, 214, 403, 1318, 1490, 1951
Hpy166II GTNNAC 5 cut(s) 127, 607, 1309, 2138, 2194
Hpy8I GTNNAC 5 cut(s) 127, 607, 1309, 2138, 2194
Hpy99I CGWCG 1 cut(s) 196
HpyCH4III ACNGT 2 cut(s) 1816, 2373
HpyCH4IV ACGT 3 cut(s) 537, 1980, 1999
HpyF10VI GCNNNNNNNGC 5 cut(s) 375, 384, 677, 1383, 1507
HpyF3I CTNAG 7 cut(s) 314, 781, 900, 1236, 1373, 1421, 2132
HpySE526I ACGT 3 cut(s) 537, 1980, 1999
Hsp92II CATG 3 cut(s) 740, 1324, 1478
HspAI GCGC 2 cut(s) 1040, 1226
KspAI GTTAAC 1 cut(s) 2194
LmnI GCTCC 5 cut(s) 709, 896, 1060, 2102, 2236
Lsp1109I GCAGC 2 cut(s) 259, 1687
LweI GCATC 1 cut(s) 1268
MaeI CTAG 9 cut(s) 44, 261, 294, 558, 1103, 1179, 1551, 1766, 1781
MaeII ACGT 3 cut(s) 537, 1980, 1999
MaeIII GTNAC 4 cut(s) 149, 286, 1343, 1939
MfeI CAATTG 1 cut(s) 644
MflI RGATCY 3 cut(s) 406, 1642, 2180
MhlI GDGCHC 5 cut(s) 129, 586, 782, 1065, 2233
MlyI GAGTC 3 cut(s) 45, 1247, 1463
MmeI TCCRAC 7 cut(s) 19, 462, 874, 1163, 1221, 1446, 1732
MseI TTAA 2 cut(s) 1382, 2193
MslI CAYNNNNRTG 1 cut(s) 1074
MspCI CTTAAG 1 cut(s) 1381
MspI CCGG 3 cut(s) 628, 1387, 2184
MspR9I CCNGG 3 cut(s) 137, 757, 1388
MunI CAATTG 1 cut(s) 644
Mva1269I GAATGC 5 cut(s) 1291, 1304, 1533, 1903, 2102
MvaI CCWGG 2 cut(s) 137, 757
MvnI CGCG 4 cut(s) 181, 369, 1040, 1226
MwoI GCNNNNNNNGC 5 cut(s) 375, 384, 677, 1383, 1507
NciI CCSGG 1 cut(s) 1388
NcoI CCATGG 1 cut(s) 1474
NlaIII CATG 3 cut(s) 740, 1324, 1478
NlaIV GGNNCC 5 cut(s) 547, 1036, 1644, 2098, 2182
NmuCI GTSAC 1 cut(s) 1939
NspI RCATGY 1 cut(s) 740
PciI ACATGT 1 cut(s) 736
PcsI WCGNNNNNNNCGW 3 cut(s) 221, 251, 2005
PctI GAATGC 5 cut(s) 1291, 1304, 1533, 1903, 2102
PfeI GAWTC 4 cut(s) 523, 665, 980, 1269
Pfl23II CGTACG 1 cut(s) 828
PflMI CCANNNNNTGG 1 cut(s) 1461
PkrI GCNGC 4 cut(s) 274, 1702, 1840, 2189
Ple19I CGATCG 1 cut(s) 603
PleI GAGTC 3 cut(s) 44, 1246, 1463
PpsI GAGTC 3 cut(s) 44, 1246, 1463
PscI ACATGT 1 cut(s) 736
Psp124BI GAGCTC 3 cut(s) 782, 1065, 2233
Psp1406I AACGTT 2 cut(s) 537, 1980
Psp6I CCWGG 2 cut(s) 135, 755
PspGI CCWGG 2 cut(s) 135, 755
PspLI CGTACG 1 cut(s) 828
PspN4I GGNNCC 5 cut(s) 547, 1036, 1644, 2098, 2182
PspPI GGNCC 3 cut(s) 904, 1034, 1258
PsrI GAACNNNNNNTAC 2 cut(s) 2061, 2093
PstI CTGCAG 1 cut(s) 2226
PsuI RGATCY 3 cut(s) 406, 1642, 2180
PvuI CGATCG 1 cut(s) 603
RsaI GTAC 9 cut(s) 59, 86, 208, 830, 872, 1779, 1847, 2079, 2092
RsaNI GTAC 9 cut(s) 58, 85, 207, 829, 871, 1778, 1846, 2078, 2091
RseI CAYNNNNRTG 1 cut(s) 1074
SacI GAGCTC 3 cut(s) 782, 1065, 2233
SaqAI TTAA 2 cut(s) 1382, 2193
SatI GCNGC 4 cut(s) 273, 1701, 1839, 2188
Sau96I GGNCC 3 cut(s) 904, 1034, 1258
ScaI AGTACT 2 cut(s) 208, 1779
SchI GAGTC 3 cut(s) 45, 1247, 1463
ScrFI CCNGG 3 cut(s) 137, 757, 1388
SduI GDGCHC 5 cut(s) 129, 586, 782, 1065, 2233
SfaNI GCATC 1 cut(s) 1268
SfcI CTRYAG 1 cut(s) 2222
SmiMI CAYNNNNRTG 1 cut(s) 1074
SmlI CTYRAG 4 cut(s) 1043, 1381, 1652, 1830
SmoI CTYRAG 4 cut(s) 1043, 1381, 1652, 1830
SpeI ACTAGT 1 cut(s) 1765
SsiI CCGC 7 cut(s) 161, 318, 367, 1038, 1838, 2100, 2187
SspMI CTAG 9 cut(s) 44, 261, 294, 558, 1103, 1179, 1551, 1766, 1781
SstI GAGCTC 3 cut(s) 782, 1065, 2233
StyD4I CCNGG 3 cut(s) 135, 755, 1386
StyI CCWWGG 2 cut(s) 1455, 1474
TaaI ACNGT 2 cut(s) 1816, 2373
TaiI ACGT 3 cut(s) 540, 1983, 2002
TaqII GACCGA 1 cut(s) 1899
TatI WGTACW 5 cut(s) 84, 206, 870, 1777, 2077
TauI GCSGC 2 cut(s) 1841, 2190
TfiI GAWTC 4 cut(s) 523, 665, 980, 1269
Tru1I TTAA 2 cut(s) 1382, 2193
Tru9I TTAA 2 cut(s) 1382, 2193
TscAI CASTG 2 cut(s) 1687, 2158
TseFI GTSAC 1 cut(s) 1939
TseI GCWGC 2 cut(s) 272, 1700
Tsp45I GTSAC 1 cut(s) 1939
TspDTI ATGAA 7 cut(s) 114, 297, 824, 849, 1146, 1151, 1893
TspGWI ACGGA 2 cut(s) 1331, 2283
TspRI CASTG 2 cut(s) 1687, 2158
Van91I CCANNNNNTGG 1 cut(s) 1461
Vha464I CTTAAG 1 cut(s) 1381
VneI GTGCAC 1 cut(s) 125
XapI RAATTY 4 cut(s) 226, 1012, 1563, 1595
XbaI TCTAGA 1 cut(s) 1102
XceI RCATGY 1 cut(s) 740
XcmI CCANNNNNNNNNTGG 4 cut(s) 298, 1028, 1462, 1865
XmiI GTMKAC 1 cut(s) 2137
XspI CTAG 9 cut(s) 44, 261, 294, 558, 1103, 1179, 1551, 1766, 1781
ZrmI AGTACT 2 cut(s) 208, 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.