Rh5AG142500

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0006392
Physical Location & Seq
Forward (+)
14880629 .. 14884367
3739 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG142500.1

Sequence Viewer

Length: 3024 bp
ATGGCTGCTTCTTCCTTGCGAGAGTTGCTTACAGAAGAAGCATATCAACGCAGGAACAACAACAACAACATGTTCGTCGCCAAAACCAAAAAACCAGTGAAGTACAGAGTTGCTCCAGATGAGTCTCTGGCTTTGTTGCCTATACACATCTGCCACGATCGAAAAAGCTACGACTTCTCCAAGCACAAGGCTCAAAACTCTGTTATGCGAAAAGGGTCGTCTAGAAGAGTGAGTTCTACTTCAGAGAGGTCGAATTCCAAGACGGTGGTCTCGGAAAGTAGTTCGAGAAGAACAGAGCCTGCGGCGCTTGATGAAGTTGCCACTAAAGCTGTGGTTTCTATTCTCAGCGGATATGCGGGTCGTTATATAAAGGACGAGGAGTTTAGAGGAGGGATTGAGGACAAGTGTAGGGCTTGTTTGGCGAGGAAGAAAAGAGATTCGGATAGTGGAGTACTTGAGACTTTGGAATCAGGTGTTGAAAATGTTAACAAGTTGGTGGAGAATCCAGTTTTTTCGATGAAAGCACTGAGAAAATGCATTGGGAATTTGAGCAGTGTTGTTGCTTCTCTGGATGCCAATAAGTCCAAGATGAATGCTTCGACTTGTGGTATACCCAATTCAAATCTCTCTGCTTGTGCTCAGCTCTACTTGGCAATTGTTCACAAGCTTGAGAGAAATGACTTGGTTTCTGCTAAGCATTTGCTTCAAGTTTTCTGTGATTCACCATTTTTAGCAAGAACCCATTTGCTTCCTGATCTATGGGAACATCTCTTACTTCCACATCTTCTTCATCTGAAGATATGGTATACCAAGGAGATTGAGGTTGTTTCACACTCATTTGAGAAGGAGAAGAGAATCAAATCCTTAACCAAAGTCTATAATGACCAAATGGATTTGGGGACTACAAAGTCTGCTCAATACTACAAAGAGTGGCTTAAATTTGGGGCTGAGGCTCCTCCTGTTGCTCCAGAAATACCTCTGCCTTCAGTACCAAGTAGCAGATCAAGACGACGGAGAGCATCCGATTCTTTCGCTTCACATTCCTCATTGAACAAAAATTTATATCAGGCTGTGTTTGGCCCCACACTCGAAAGGCGGTCAGTGGACCTTGATGATCGAAATGGAGTTTCAATTGCTTCTTGGGATGTAAATGAAGAGGAGAAGCTGTTTGAAGATGAAGCTAATGCAGACAAGTACAACAGTCTCAGTTTTGTTCATAGGGAAGACAGTAATGGACGAAAGTCATCGAGCCGAAGTCATAGAAATCCAAAAACTGAGTTATGGCCTGAGTCTGATCAGACAAAGAAATCAGACTATTTTGGATTCTTTAGCTGCCAGAATGCACCTACTGAATGCCTAGTGAATAGGAATCTCATATTTAAGAGTAATTCAGTTCAACAAGAAGACAATTCCCACCTTCCTTCAAGCAATTTAGGCAGTGCAATCAGTACTCTTTACTCGTCGGATAGTCTCAGTGATTGCGAAATTGCAGTTCGTGCAATTACCAAAGCTTGGTTGGACTCACATGGTGATCCTGTCATTGAAGCCATGTTATCCGAGCCACCTCTTATCCAGGGAATGCTGGAGGTGTTGTTTGCTTCCACTGATGATGAAATTTTGGAACTAGTAATATCGGTTTTAGCTGAATTTGTAGCAAGAAATGAGCAGAATAGAAAGATAATACTGAATTTTGATCCACAGCTTGAAATCTTCATGAGACTTCTAAGAAGTAGTGGTCTATTTTTGAAAGCAGCTGTTTTGCTGTACCTGTTGTTGCCAAAGGCAAAACAGATGCTATCACTTGAATGGGTGGCACTAGTCCTTCGAGTACTCGAGTTTGGAGACCAGTTGCAGACCCTATTCACCGTACGATGCAGCCCTCAAGCAGCAGCGTTGTACCTTTTGGACCAGCTTCTTACGGGTTTTGATGAAGATCGGAACTTGGAGAATGCCAGACAGGTGGTTTCTCTAGGAGGCTTAAGCCTTCTGGTGACTCAAATTGAGAAAGGGGATACTCATGAGAGGAATAATGTTGCTTCCATAATTTCATGCTGTGTTCGAGCTGATGGAAGCTGTCGAAACTACTTGGCTGATTTTCTGAACAAGCCTTCTCTTCTCGAACTCATTGTACTTGGAAATGGAAGCAACTCAACTTGTTCTGCATTTGCTCTATTGATTGAAATACTCTGCCTTAGTAGACGAACGAAGATCACTCAAATCCTAGAAGGACTGAAAGAAGGATGCTGTGGCTTGAACACAATGCAAATTTTATTGGTCTATCTGCAGAGAGCTTCACCAGAAGAGCGCCCCTTAGTTGCAGCCATATTGCTACAACTTGATCTTATGGGAGATCCTTTTAGATGCAGTGTATATAGAGAAGAAGCCATCGAAGCAATGATAGGCGCTTTAGATTGTCGAACATGTGACGAAAAAGTCCAAGAACGATCAGCGAGATCTCTCTTGATGTTGGGAGGCTGGTTTTCATACACAGGAGAGGCATCCACAGAACATTGGCTTTTACAACAAGCGGGTTTCAGTTATTGGTCAAGGGATTCATTTCACTTCAAAGAAGGTTTTTTACACTCAAATGAAGACGAAGAAGCAACAAAAAATTGGCAGAGGAAAGCAGCCACTGCATTGTTTAGAAGCGGTAGTAAGAAATTACTGGGGGCCCTTTTGGATTCCATAGCAAATGGCATCCCGAGTTTAGCACGAGTGAGCCTTGTGACATTGTCCTGGATGAGTAGCTTTCTCAGTACAGTTGGAGATGAACATTTGAAGTCCATGGCATGCTCAATTCTTGTGCCTCAGTTGCTCGAGTCGCTGAAGTTTCGCAAAGATGTGGAGGAAAGAGTACTTGCTTCTTACTCATTACTGAATCTTGTAAAAAGTTCAGGTGATGAATACATCCCCATGCTCTCATCAGTGGACAAAGAGGTTCTTAGCAAACTCCAGAACCTCTCCTTAGTGACATGGACAGCTAATGACCTTATTTCAATCATCACAAGCAATTATGAGGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1007

Amino Acids

112.68

Weight (kDa)

6.34

Isoelectric Point (pI)

49.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_LIN PF23568 106 - 329 8.7e-89 E3 ubiquitin-protein ligase LIN-like, ARM repeat
ARM_LIN_2nd PF23654 475 - 636 5e-59 E3 ubiquitin-protein ligase LIN-like, ARM repeat
ARM_LIN_C PF23628 637 - 1001 9e-131 Putative E3 ubiquitin-protein ligase LIN, ARM-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 907, 2432
AccB7I CCANNNNNTGG 1 cut(s) 1512
AccI GTMKAC 3 cut(s) 610, 806, 2197
AciI CCGC 6 cut(s) 302, 348, 356, 1096, 2528, 2649
AclWI GGATC 3 cut(s) 1526, 1688, 2345
AcsI RAATTY 8 cut(s) 253, 544, 938, 1057, 1614, 1646, 1687, 2265
AcuI CTGAAG 4 cut(s) 225, 815, 969, 2846
AdeI CACNNNGTG 1 cut(s) 1529
AfiI CCNNNNNNNGG 1 cut(s) 1512
AflII CTTAAG 1 cut(s) 1978
AflIII ACRYGT 2 cut(s) 69, 2420
AhlI ACTAGT 2 cut(s) 1624, 1816
AjnI CCWGG 2 cut(s) 1572, 2735
Alw21I GWGCWC 1 cut(s) 640
Alw26I GTCTC 7 cut(s) 129, 274, 452, 1208, 1475, 1711, 1836
AlwI GGATC 3 cut(s) 1526, 1688, 2345
AlwNI CAGNNNCTG 2 cut(s) 299, 2633
Ama87I CYCGRG 3 cut(s) 1832, 2701, 2816
AoxI GGCC 3 cut(s) 1078, 1283, 2670
ApaI GGGCCC 1 cut(s) 2674
ApeKI GCWGC 8 cut(s) 5, 1332, 1751, 1875, 1886, 1889, 2318, 2627
ApoI RAATTY 8 cut(s) 253, 544, 938, 1057, 1614, 1646, 1687, 2265
AspLEI GCGC 3 cut(s) 307, 2307, 2405
AspS9I GGNCC 5 cut(s) 1079, 1105, 1906, 2670, 2671
AsuHPI GGTGA 6 cut(s) 714, 1541, 1855, 2002, 2286, 2909
AvaI CYCGRG 3 cut(s) 1832, 2701, 2816
AvaII GGWCC 2 cut(s) 1105, 1906
BaeGI GKGCMC 1 cut(s) 2674
BanII GRGCYC 1 cut(s) 2674
BarI GAAGNNNNNNTAC 2 cut(s) 2562, 2594
BauI CACGAG 1 cut(s) 2712
BbsI GAAGAC 3 cut(s) 1230, 1410, 2598
Bbv12I GWGCWC 1 cut(s) 640
BbvCI CCTCAGC 1 cut(s) 948
BbvI GCAGC 7 cut(s) 1319, 1763, 1887, 1898, 1901, 2330, 2639
BccI CCATC 2 cut(s) 2060, 2393
BciT130I CCWGG 2 cut(s) 1574, 2737
BciVI GTATCC 1 cut(s) 2005
BclI TGATCA 1 cut(s) 1294
BcoDI GTCTC 7 cut(s) 129, 274, 452, 1208, 1475, 1711, 1836
BcuI ACTAGT 2 cut(s) 1624, 1816
BfaI CTAG 7 cut(s) 222, 1358, 1625, 1817, 1970, 2222, 3022
BfmI CTRYAG 1 cut(s) 2282
BfoI RGCGCY 3 cut(s) 308, 2308, 2406
BfrI CTTAAG 1 cut(s) 1978
BfuI GTATCC 1 cut(s) 2005
BglII AGATCT 1 cut(s) 2453
BisI GCNGC 9 cut(s) 6, 303, 1333, 1752, 1876, 1887, 1890, 2319, 2628
BlpI GCTNAGC 2 cut(s) 639, 693
BlsI GCNGC 9 cut(s) 7, 304, 1334, 1753, 1877, 1888, 1891, 2320, 2629
BmcAI AGTACT 4 cut(s) 453, 1450, 1830, 2856
Bme1390I CCNGG 2 cut(s) 1574, 2737
Bme18I GGWCC 2 cut(s) 1105, 1906
BmeT110I CYCGRG 3 cut(s) 1832, 2701, 2816
BmgT120I GGNCC 5 cut(s) 1079, 1105, 1906, 2670, 2671
BmiI GGNNCC 4 cut(s) 954, 1081, 2671, 2672
BmrFI CCNGG 2 cut(s) 1574, 2737
BmrI ACTGGG 1 cut(s) 2675
BmsI GCATC 8 cut(s) 562, 1028, 1782, 1862, 2231, 2351, 2507, 2706
BmuI ACTGGG 1 cut(s) 2675
BoxI GACNNNNGTC 2 cut(s) 266, 1240
BpiI GAAGAC 3 cut(s) 1230, 1410, 2598
BpmI CTGGAG 4 cut(s) 99, 951, 1604, 2936
Bpu10I CCTNAGC 1 cut(s) 948
Bpu1102I GCTNAGC 2 cut(s) 639, 693
BpuEI CTTGAG 3 cut(s) 476, 689, 1866
BsaBI GATNNNNATC 1 cut(s) 1932
BsaI GGTCTC 2 cut(s) 274, 1836
BsaJI CCNNGG 3 cut(s) 810, 1573, 2784
BsaXI ACNNNNNCTCC 6 cut(s) 161, 191, 1151, 1181, 1577, 1607
Bsc4I CCNNNNNNNGG 1 cut(s) 1512
Bse1I ACTGG 4 cut(s) 95, 506, 1846, 2670
Bse3DI GCAATG 1 cut(s) 2400
Bse8I GATNNNNATC 1 cut(s) 1932
BseBI CCWGG 2 cut(s) 1574, 2737
BseDI CCNNGG 3 cut(s) 810, 1573, 2784
BseGI GGATG 8 cut(s) 577, 1019, 1150, 2246, 2498, 2697, 2745, 2907
BseJI GATNNNNATC 1 cut(s) 1932
BseLI CCNNNNNNNGG 1 cut(s) 1512
BseMI GCAATG 1 cut(s) 2400
BseNI ACTGG 4 cut(s) 95, 506, 1846, 2670
BseRI GAGGAG 4 cut(s) 392, 402, 945, 1172
BseSI GKGCMC 1 cut(s) 2674
BseXI GCAGC 7 cut(s) 1319, 1763, 1887, 1898, 1901, 2330, 2639
Bsh1285I CGRYCG 1 cut(s) 160
BshFI GGCC 3 cut(s) 1080, 1285, 2672
BsiEI CGRYCG 1 cut(s) 160
BsiHKAI GWGCWC 1 cut(s) 640
BsiHKCI CYCGRG 3 cut(s) 1832, 2701, 2816
BsiWI CGTACG 1 cut(s) 1867
BslFI GGGAC 1 cut(s) 913
BslI CCNNNNNNNGG 1 cut(s) 1512
BsmAI GTCTC 7 cut(s) 129, 274, 452, 1208, 1475, 1711, 1836
BsmFI GGGAC 1 cut(s) 913
BsmI GAATGC 5 cut(s) 598, 1345, 1358, 1584, 1954
BsnI GGCC 3 cut(s) 1080, 1285, 2672
Bso31I GGTCTC 2 cut(s) 274, 1836
BsoBI CYCGRG 3 cut(s) 1832, 2701, 2816
Bsp120I GGGCCC 1 cut(s) 2670
Bsp1286I GDGCHC 2 cut(s) 640, 2674
Bsp1720I GCTNAGC 2 cut(s) 639, 693
Bsp19I CCATGG 1 cut(s) 2784
BspACI CCGC 6 cut(s) 302, 348, 356, 1096, 2528, 2649
BspANI GGCC 3 cut(s) 1080, 1285, 2672
BspHI TCATGA 2 cut(s) 1713, 2017
BspLI GGNNCC 4 cut(s) 954, 1081, 2671, 2672
BspMAI CTGCAG 1 cut(s) 2286
BspPI GGATC 3 cut(s) 1526, 1688, 2345
BspQI GCTCTTC 1 cut(s) 2295
BspTI CTTAAG 1 cut(s) 1978
BspTNI GGTCTC 2 cut(s) 274, 1836
BsrDI GCAATG 1 cut(s) 2400
BsrI ACTGG 4 cut(s) 95, 506, 1846, 2670
BssECI CCNNGG 3 cut(s) 810, 1573, 2784
BssNAI GTATAC 2 cut(s) 611, 807
BssSI CACGAG 1 cut(s) 2712
BssT1I CCWWGG 2 cut(s) 810, 2784
Bst1107I GTATAC 2 cut(s) 611, 807
Bst2BI CACGAG 1 cut(s) 2712
Bst2UI CCWGG 2 cut(s) 1574, 2737
Bst4CI ACNGT 5 cut(s) 265, 1202, 1229, 1867, 2761
Bst6I CTCTTC 5 cut(s) 220, 845, 1149, 2118, 2295
BstAFI CTTAAG 1 cut(s) 1978
BstAPI GCANNNNNTGC 2 cut(s) 1496, 2633
BstC8I GCNNGC 2 cut(s) 300, 2791
BstDSI CCRYGG 1 cut(s) 2784
BstF5I GGATG 8 cut(s) 577, 1019, 1150, 2246, 2498, 2697, 2745, 2907
BstH2I RGCGCY 3 cut(s) 308, 2308, 2406
BstHHI GCGC 3 cut(s) 307, 2307, 2405
BstMAI GTCTC 7 cut(s) 129, 274, 452, 1208, 1475, 1711, 1836
BstMCI CGRYCG 1 cut(s) 160
BstNI CCWGG 2 cut(s) 1574, 2737
BstNSI RCATGY 3 cut(s) 73, 2424, 2793
BstPAI GACNNNNGTC 2 cut(s) 266, 1240
BstSCI CCNGG 2 cut(s) 1572, 2735
BstSFI CTRYAG 1 cut(s) 2282
BstSLI GKGCMC 1 cut(s) 2674
BstV1I GCAGC 7 cut(s) 1319, 1763, 1887, 1898, 1901, 2330, 2639
BstV2I GAAGAC 3 cut(s) 1230, 1410, 2598
BstX2I RGATCY 2 cut(s) 2350, 2453
BstXI CCANNNNNNTGG 2 cut(s) 265, 1960
BstYI RGATCY 2 cut(s) 2350, 2453
BstZ17I GTATAC 2 cut(s) 611, 807
BsuI GTATCC 1 cut(s) 2005
BsuRI GGCC 3 cut(s) 1080, 1285, 2672
BtgI CCRYGG 1 cut(s) 2784
BtsCI GGATG 8 cut(s) 577, 1019, 1150, 2246, 2498, 2697, 2745, 2907
BtsI GCAGTG 4 cut(s) 559, 1444, 2371, 2631
Cac8I GCNNGC 2 cut(s) 300, 2791
CaiI CAGNNNCTG 2 cut(s) 299, 2633
CciI TCATGA 2 cut(s) 1713, 2017
CfoI GCGC 3 cut(s) 307, 2307, 2405
Cfr13I GGNCC 5 cut(s) 1079, 1105, 1906, 2670, 2671
DraIII CACNNNGTG 1 cut(s) 1529
DrdI GACNNNNNNGTC 2 cut(s) 907, 2432
DseDI GACNNNNNNGTC 2 cut(s) 907, 2432
Eam1104I CTCTTC 5 cut(s) 220, 845, 1149, 2118, 2295
EarI CTCTTC 5 cut(s) 220, 845, 1149, 2118, 2295
Eco130I CCWWGG 2 cut(s) 810, 2784
Eco24I GRGCYC 1 cut(s) 2674
Eco31I GGTCTC 2 cut(s) 274, 1836
Eco47I GGWCC 2 cut(s) 1105, 1906
Eco57I CTGAAG 4 cut(s) 225, 815, 969, 2846
Eco88I CYCGRG 3 cut(s) 1832, 2701, 2816
EcoO109I RGGNCCY 2 cut(s) 2670, 2671
EcoRI GAATTC 1 cut(s) 253
EcoRII CCWGG 2 cut(s) 1572, 2735
EcoT14I CCWWGG 2 cut(s) 810, 2784
EcoT22I ATGCAT 1 cut(s) 539
EcoT38I GRGCYC 1 cut(s) 2674
ErhI CCWWGG 2 cut(s) 810, 2784
FalI AAGNNNNNCTT 4 cut(s) 918, 950, 2925, 2957
FaqI GGGAC 1 cut(s) 913
FauI CCCGC 2 cut(s) 349, 2521
FbaI TGATCA 1 cut(s) 1294
FblI GTMKAC 3 cut(s) 610, 806, 2197
Fnu4HI GCNGC 9 cut(s) 6, 303, 1333, 1752, 1876, 1887, 1890, 2319, 2628
FokI GGATG 8 cut(s) 584, 1006, 1157, 2253, 2485, 2684, 2752, 2894
FriOI GRGCYC 1 cut(s) 2674
Fsp4HI GCNGC 9 cut(s) 6, 303, 1333, 1752, 1876, 1887, 1890, 2319, 2628
FspBI CTAG 7 cut(s) 222, 1358, 1625, 1817, 1970, 2222, 3022
GlaI GCGC 3 cut(s) 306, 2306, 2404
GluI GCNGC 9 cut(s) 6, 303, 1333, 1752, 1876, 1887, 1890, 2319, 2628
GsuI CTGGAG 4 cut(s) 99, 951, 1604, 2936
HaeII RGCGCY 3 cut(s) 308, 2308, 2406
HaeIII GGCC 3 cut(s) 1080, 1285, 2672
HhaI GCGC 3 cut(s) 307, 2307, 2405
Hin6I GCGC 3 cut(s) 305, 2305, 2403
HinP1I GCGC 3 cut(s) 305, 2305, 2403
HincII GTYRAC 1 cut(s) 487
HindII GTYRAC 1 cut(s) 487
HindIII AAGCTT 2 cut(s) 665, 1509
HpaI GTTAAC 1 cut(s) 487
HphI GGTGA 6 cut(s) 714, 1541, 1855, 2002, 2286, 2909
Hpy166II GTNNAC 7 cut(s) 487, 611, 661, 807, 1105, 2198, 2929
Hpy8I GTNNAC 7 cut(s) 487, 611, 661, 807, 1105, 2198, 2929
Hpy99I CGWCG 3 cut(s) 80, 1014, 1465
HpyCH4III ACNGT 5 cut(s) 265, 1202, 1229, 1867, 2761
HspAI GCGC 3 cut(s) 305, 2305, 2403
Ksp22I TGATCA 1 cut(s) 1294
KspAI GTTAAC 1 cut(s) 487
LguI GCTCTTC 1 cut(s) 2295
LmnI GCTCC 3 cut(s) 118, 958, 970
Lsp1109I GCAGC 7 cut(s) 1319, 1763, 1887, 1898, 1901, 2330, 2639
LweI GCATC 8 cut(s) 562, 1028, 1782, 1862, 2231, 2351, 2507, 2706
MaeI CTAG 7 cut(s) 222, 1358, 1625, 1817, 1970, 2222, 3022
MaeIII GTNAC 4 cut(s) 1990, 2423, 2725, 2968
MfeI CAATTG 2 cut(s) 654, 1131
MflI RGATCY 2 cut(s) 2350, 2453
MhlI GDGCHC 2 cut(s) 640, 2674
MlyI GAGTC 5 cut(s) 131, 1298, 1514, 1987, 2828
MmeI TCCRAC 3 cut(s) 1443, 1497, 2743
Mph1103I ATGCAT 1 cut(s) 539
MseI TTAA 5 cut(s) 486, 866, 936, 1380, 1979
MslI CAYNNNNRTG 3 cut(s) 1804, 2586, 2912
MspA1I CMGCKG 2 cut(s) 348, 1754
MspCI CTTAAG 1 cut(s) 1978
MspR9I CCNGG 2 cut(s) 1574, 2737
MunI CAATTG 2 cut(s) 654, 1131
Mva1269I GAATGC 5 cut(s) 598, 1345, 1358, 1584, 1954
MvaI CCWGG 2 cut(s) 1574, 2737
NcoI CCATGG 1 cut(s) 2784
NlaIV GGNNCC 4 cut(s) 954, 1081, 2671, 2672
NmuCI GTSAC 4 cut(s) 1990, 2423, 2725, 2968
NsiI ATGCAT 1 cut(s) 539
NspI RCATGY 3 cut(s) 73, 2424, 2793
PaeI GCATGC 1 cut(s) 2793
PaeR7I CTCGAG 2 cut(s) 1832, 2816
PagI TCATGA 2 cut(s) 1713, 2017
PciI ACATGT 2 cut(s) 69, 2420
PciSI GCTCTTC 1 cut(s) 2295
PctI GAATGC 5 cut(s) 598, 1345, 1358, 1584, 1954
Pfl23II CGTACG 1 cut(s) 1867
PflFI GACNNNGTC 1 cut(s) 2731
PflMI CCANNNNNTGG 1 cut(s) 1512
PfoI TCCNGGA 1 cut(s) 2735
PkrI GCNGC 9 cut(s) 7, 304, 1334, 1753, 1877, 1888, 1891, 2320, 2629
Ple19I CGATCG 1 cut(s) 160
PleI GAGTC 5 cut(s) 130, 1297, 1514, 1987, 2827
PpsI GAGTC 5 cut(s) 130, 1297, 1514, 1987, 2827
PscI ACATGT 2 cut(s) 69, 2420
PshAI GACNNNNGTC 2 cut(s) 266, 1240
Psp6I CCWGG 2 cut(s) 1572, 2735
PspGI CCWGG 2 cut(s) 1572, 2735
PspLI CGTACG 1 cut(s) 1867
PspN4I GGNNCC 4 cut(s) 954, 1081, 2671, 2672
PspOMI GGGCCC 1 cut(s) 2670
PspPI GGNCC 5 cut(s) 1079, 1105, 1906, 2670, 2671
PspXI VCTCGAGB 2 cut(s) 1832, 2816
PsrI GAACNNNNNNTAC 4 cut(s) 756, 788, 2112, 2144
PstI CTGCAG 1 cut(s) 2286
PstNI CAGNNNCTG 2 cut(s) 299, 2633
PsuI RGATCY 2 cut(s) 2350, 2453
PsyI GACNNNGTC 1 cut(s) 2731
PvuI CGATCG 1 cut(s) 160
PvuII CAGCTG 1 cut(s) 1754
RseI CAYNNNNRTG 3 cut(s) 1804, 2586, 2912
SapI GCTCTTC 1 cut(s) 2295
SaqAI TTAA 5 cut(s) 486, 866, 936, 1380, 1979
SatI GCNGC 9 cut(s) 6, 303, 1333, 1752, 1876, 1887, 1890, 2319, 2628
Sau96I GGNCC 5 cut(s) 1079, 1105, 1906, 2670, 2671
ScaI AGTACT 4 cut(s) 453, 1450, 1830, 2856
SchI GAGTC 5 cut(s) 131, 1298, 1514, 1987, 2828
ScrFI CCNGG 2 cut(s) 1574, 2737
SduI GDGCHC 2 cut(s) 640, 2674
SfaNI GCATC 8 cut(s) 562, 1028, 1782, 1862, 2231, 2351, 2507, 2706
SfcI CTRYAG 1 cut(s) 2282
Sfr274I CTCGAG 2 cut(s) 1832, 2816
SinI GGWCC 2 cut(s) 1105, 1906
SlaI CTCGAG 2 cut(s) 1832, 2816
SmiMI CAYNNNNRTG 3 cut(s) 1804, 2586, 2912
SmlI CTYRAG 6 cut(s) 455, 668, 1832, 1881, 1978, 2816
SmoI CTYRAG 6 cut(s) 455, 668, 1832, 1881, 1978, 2816
SpeI ACTAGT 2 cut(s) 1624, 1816
SphI GCATGC 1 cut(s) 2793
SsiI CCGC 6 cut(s) 302, 348, 356, 1096, 2528, 2649
SspMI CTAG 7 cut(s) 222, 1358, 1625, 1817, 1970, 2222, 3022
StyD4I CCNGG 2 cut(s) 1572, 2735
StyI CCWWGG 2 cut(s) 810, 2784
TaaI ACNGT 5 cut(s) 265, 1202, 1229, 1867, 2761
TatI WGTACW 8 cut(s) 102, 451, 1194, 1448, 1828, 2128, 2756, 2854
TauI GCSGC 1 cut(s) 305
Tru1I TTAA 5 cut(s) 486, 866, 936, 1380, 1979
Tru9I TTAA 5 cut(s) 486, 866, 936, 1380, 1979
TseFI GTSAC 4 cut(s) 1990, 2423, 2725, 2968
TseI GCWGC 8 cut(s) 5, 1332, 1751, 1875, 1886, 1889, 2318, 2627
Tsp45I GTSAC 4 cut(s) 1990, 2423, 2725, 2968
TspGWI ACGGA 1 cut(s) 1027
Tth111I GACNNNGTC 1 cut(s) 2731
Van91I CCANNNNNTGG 1 cut(s) 1512
Vha464I CTTAAG 1 cut(s) 1978
VpaK11BI GGWCC 2 cut(s) 1105, 1906
XapI RAATTY 8 cut(s) 253, 544, 938, 1057, 1614, 1646, 1687, 2265
XbaI TCTAGA 1 cut(s) 221
XceI RCATGY 3 cut(s) 73, 2424, 2793
XcmI CCANNNNNNNNNTGG 2 cut(s) 328, 1513
XhoI CTCGAG 2 cut(s) 1832, 2816
XmiI GTMKAC 3 cut(s) 610, 806, 2197
XspI CTAG 7 cut(s) 222, 1358, 1625, 1817, 1970, 2222, 3022
ZrmI AGTACT 4 cut(s) 453, 1450, 1830, 2856
Zsp2I ATGCAT 1 cut(s) 539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.