Rw5G012610

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0006392
Physical Location & Seq
Forward (+)
14841186 .. 14845408
4223 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G012610.1

Sequence Viewer

Length: 2385 bp
ATGGCTGCTTCTTCCTTGCGAGAGTTGCTTACAGAAGAAGCATATCAACGCAGGAACAACAACAACAACAACATGTTCGTCGCCAAAACCAAAAAACCAGTGAAGTACAGAGTTGCTCCAGATGAGTCTCTGGCTTTGTTGCCTATACACATCTGCCACGATCGAAAAAGCTACGACTTCTCCAAGCACAAGGCTCAAAACTCTGTTATGCGAAAAGGGTCGTCTAGAAGAGTGAGTTCTACTTCAGAGAGGTCGAATTCCAAGACGGTGGTCTCGGAAAGTAGTTCGAGAAGAACAGAGCCTGCGGCGCTTGATGAAGTTGCCACTAAAGCTGTGGTTTCTATTCTCAGCGGATATGCGGGTCGTTATATAAAGGACGAGGAGTTTAGAGGAGGGATTGAGGACAAGTGTAGGGCTTGTTTGGCGAGGAAGAAAAGAGATTCGGATAGTGGAGTACTTGAGACTTTGGAATCAGGTGTTGAAAATGTTAACAAGTTGGTGGAGAATCCAGTTTTTTCGATGAAAGCACTGAGAAAATGCATTGGGAATTTGAGCAGTGTTGTTGCTTCTCTGGATGCCAATAAGTCCAAGATGAATGCTTCGACTTGTGGTATACCCAATTCAAATCTCTCTGCTTGTGCTCAGCTCTACTTGGCAATTGTTCACAAGCTTGAGAGAAATGACTTGGTTTCTGCTAAGCATTTGCTTCAAGTTTTCTGTGATTCACCATTTTTAGCAAGAACCCATTTGCTTCCTGATCTATGGGAACATCTCTTACTTCCACATCTTCTTCATCTGAAGATATGGTATACCAAGGAGATTGAGGTTGTTTCACACTCATTTGAGAAGGAGAAGAGAATCAAATCCTTAACCAAAGTCTATAATGACCAAATGGATTTGGGGACTACAAAGTCTGCTCAATACTACAAAGAGTGGCTTAAATTTGGGGCTGAGGCTCCTCCTGTTGCTCCAGAAATACCTCTGCCTTCAGTACCAAGTAGCAGATCAAGACGACGGAGAGCATCCGATTCTTTCGCTTCACATTCCTCATTGAACAAAAATTTATATCAGGCTGTGTTTGGCCCCACACTCGAAAGGCGGTCAGTGGACCTTGATGATCGAAATGGAGTTTCAATTGCTTCTTGGGATGTAAATGAAGAGGAGAAGCTGTTTGAAGATGAAGCTAATGCAGACAAGTACAACAGTCTCAGTTTTGTTCATAGGGAAGACAGTAATGGACGAAAGTCATCGAGCCGAAGTCATAGAAATCCAAAAACTGAGTTATGGCCTGAGTCTGATCAGACAAAGAAATCAGACTATTTTGGATTCTTTAGCTGCCAGAATGCACCTACTGAATGCCTAGTGAATAGGAATCTCATATTTAAGAGTAATTCAGTTCAACAAGAAGACAATTCCCACCTTCCTTCAAGCAATTTAGGCAGTGCAATCAGTACTCTTTACTCGTCGGATAGTCTCAGTGATTGCGAAATTGCAGTTCGTGCAATTACCAAAGCTTGGTTGGACTCACATGGTGATCCTGTCATTGAAGCCATGTTATCCGAGCCACCTCTTATCCAGGGAATGCTGGAGGTGTTGTTTGCTTCCACTGATGATGAAATTTTGGAACTAGTAATATCGGTTTTAGCTGAATTTGTAGCAAGAAATGAGCAGAATAGAAAGATAATACTGAATTTTGATCCACAGCTTGAAATCTTCATGAGACTTCTAAGAAGTAGTGGTCTATTTTTGAAAGCAGCTGTTTTGCTGTACCTGTTGTTGCCAAAGGCAAAACAGATGCTATCACTTGAATGGGTGGCACTAGTCCTTCGAGTACTCGAGTTTGGAGACCAGTTGCAGACCCTATTCACCGTACGATGCAGCCCTCAAGCAGCAGCGTTGTACCTTTTGGACCAGCTTCTTACGGGTTTTGATGAAGATCGGAACTTGGAGAATGCCAGACAGGTGGTTTCTCTAGGAGGCTTAAGCCTTCTGGTGACTCAAATTGAGAAAGGGGATACTCATGAGAGGAATAATGTTGCTTCCATAATTTCATGCTGTGTTCGAGCTGATGGAAGCTGTCGAAACTACTTGGCTGATTTTCTGAACAAGCCTTCTCTTCTCGAACTCATTGTACTTGGAAATGGAAGCAACTCAACTTGTTCTGCATTTGCTCTATTGATTGAAATACTCTGCCTTAGTAGACGAACGAAGATCACTCAAATCCTAGAAGGACTGAAAGAAGGATGCTGTGGCTTGAACACAATGCAAATTTTATTGGTCTATCTGCAGAGAGCTTCACCAGAAGAGCGCCCCTTAGTTGCAGCCATATTGCTACAACTTGATCTTATGGTAAATCCATTGTTAATCTTTATGCCTTGCTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

794

Amino Acids

88.8

Weight (kDa)

7.21

Isoelectric Point (pI)

53.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_LIN PF23568 107 - 330 5.7e-89 E3 ubiquitin-protein ligase LIN-like, ARM repeat
ARM_LIN_2nd PF23654 476 - 637 3.4e-59 E3 ubiquitin-protein ligase LIN-like, ARM repeat
ARM_LIN_C PF23628 638 - 786 6.8e-54 Putative E3 ubiquitin-protein ligase LIN, ARM-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 910
AccB7I CCANNNNNTGG 1 cut(s) 1515
AccI GTMKAC 3 cut(s) 613, 809, 2200
AciI CCGC 4 cut(s) 305, 351, 359, 1099
AclWI GGATC 2 cut(s) 1529, 1691
AcsI RAATTY 8 cut(s) 256, 547, 941, 1060, 1617, 1649, 1690, 2268
AcuI CTGAAG 3 cut(s) 228, 818, 972
AdeI CACNNNGTG 1 cut(s) 1532
AfiI CCNNNNNNNGG 1 cut(s) 1515
AflII CTTAAG 1 cut(s) 1981
AflIII ACRYGT 1 cut(s) 72
AhlI ACTAGT 2 cut(s) 1627, 1819
AjnI CCWGG 1 cut(s) 1575
Alw21I GWGCWC 1 cut(s) 643
Alw26I GTCTC 7 cut(s) 132, 277, 455, 1211, 1478, 1714, 1839
AlwI GGATC 2 cut(s) 1529, 1691
AlwNI CAGNNNCTG 1 cut(s) 302
Ama87I CYCGRG 1 cut(s) 1835
AoxI GGCC 2 cut(s) 1081, 1286
ApeKI GCWGC 7 cut(s) 5, 1335, 1754, 1878, 1889, 1892, 2321
ApoI RAATTY 8 cut(s) 256, 547, 941, 1060, 1617, 1649, 1690, 2268
AspLEI GCGC 2 cut(s) 310, 2310
AspS9I GGNCC 3 cut(s) 1082, 1108, 1909
AsuHPI GGTGA 5 cut(s) 717, 1544, 1858, 2005, 2289
AvaI CYCGRG 1 cut(s) 1835
AvaII GGWCC 2 cut(s) 1108, 1909
BbsI GAAGAC 2 cut(s) 1233, 1413
Bbv12I GWGCWC 1 cut(s) 643
BbvCI CCTCAGC 1 cut(s) 951
BbvI GCAGC 6 cut(s) 1322, 1766, 1890, 1901, 1904, 2333
BccI CCATC 1 cut(s) 2063
BciT130I CCWGG 1 cut(s) 1577
BciVI GTATCC 1 cut(s) 2008
BclI TGATCA 1 cut(s) 1297
BcoDI GTCTC 7 cut(s) 132, 277, 455, 1211, 1478, 1714, 1839
BcuI ACTAGT 2 cut(s) 1627, 1819
BfaI CTAG 6 cut(s) 225, 1361, 1628, 1820, 1973, 2225
BfmI CTRYAG 1 cut(s) 2285
BfoI RGCGCY 2 cut(s) 311, 2311
BfrI CTTAAG 1 cut(s) 1981
BfuI GTATCC 1 cut(s) 2008
BisI GCNGC 8 cut(s) 6, 306, 1336, 1755, 1879, 1890, 1893, 2322
BlpI GCTNAGC 2 cut(s) 642, 696
BlsI GCNGC 8 cut(s) 7, 307, 1337, 1756, 1880, 1891, 1894, 2323
BmcAI AGTACT 3 cut(s) 456, 1453, 1833
Bme1390I CCNGG 1 cut(s) 1577
Bme18I GGWCC 2 cut(s) 1108, 1909
BmeT110I CYCGRG 1 cut(s) 1835
BmgT120I GGNCC 3 cut(s) 1082, 1108, 1909
BmiI GGNNCC 2 cut(s) 957, 1084
BmrFI CCNGG 1 cut(s) 1577
BmsI GCATC 5 cut(s) 565, 1031, 1785, 1865, 2234
BoxI GACNNNNGTC 2 cut(s) 269, 1243
BpiI GAAGAC 2 cut(s) 1233, 1413
BpmI CTGGAG 3 cut(s) 102, 954, 1607
Bpu10I CCTNAGC 1 cut(s) 951
Bpu1102I GCTNAGC 2 cut(s) 642, 696
BpuEI CTTGAG 3 cut(s) 479, 692, 1869
BsaBI GATNNNNATC 1 cut(s) 1935
BsaI GGTCTC 2 cut(s) 277, 1839
BsaJI CCNNGG 2 cut(s) 813, 1576
BsaXI ACNNNNNCTCC 6 cut(s) 164, 194, 1154, 1184, 1580, 1610
Bsc4I CCNNNNNNNGG 1 cut(s) 1515
Bse1I ACTGG 3 cut(s) 98, 509, 1849
Bse8I GATNNNNATC 1 cut(s) 1935
BseBI CCWGG 1 cut(s) 1577
BseDI CCNNGG 2 cut(s) 813, 1576
BseGI GGATG 4 cut(s) 580, 1022, 1153, 2249
BseJI GATNNNNATC 1 cut(s) 1935
BseLI CCNNNNNNNGG 1 cut(s) 1515
BseMII CTCAG 8 cut(s) 361, 521, 656, 942, 1222, 1269, 1281, 1489
BseNI ACTGG 3 cut(s) 98, 509, 1849
BseRI GAGGAG 4 cut(s) 395, 405, 948, 1175
BseXI GCAGC 6 cut(s) 1322, 1766, 1890, 1901, 1904, 2333
Bsh1285I CGRYCG 1 cut(s) 163
BshFI GGCC 2 cut(s) 1083, 1288
BsiEI CGRYCG 1 cut(s) 163
BsiHKAI GWGCWC 1 cut(s) 643
BsiHKCI CYCGRG 1 cut(s) 1835
BsiWI CGTACG 1 cut(s) 1870
BslFI GGGAC 1 cut(s) 916
BslI CCNNNNNNNGG 1 cut(s) 1515
BsmAI GTCTC 7 cut(s) 132, 277, 455, 1211, 1478, 1714, 1839
BsmFI GGGAC 1 cut(s) 916
BsmI GAATGC 5 cut(s) 601, 1348, 1361, 1587, 1957
BsnI GGCC 2 cut(s) 1083, 1288
Bso31I GGTCTC 2 cut(s) 277, 1839
BsoBI CYCGRG 1 cut(s) 1835
Bsp1286I GDGCHC 1 cut(s) 643
Bsp1720I GCTNAGC 2 cut(s) 642, 696
BspACI CCGC 4 cut(s) 305, 351, 359, 1099
BspANI GGCC 2 cut(s) 1083, 1288
BspCNI CTCAG 8 cut(s) 360, 522, 655, 943, 1221, 1270, 1282, 1488
BspHI TCATGA 2 cut(s) 1716, 2020
BspLI GGNNCC 2 cut(s) 957, 1084
BspMAI CTGCAG 1 cut(s) 2289
BspPI GGATC 2 cut(s) 1529, 1691
BspQI GCTCTTC 1 cut(s) 2298
BspTI CTTAAG 1 cut(s) 1981
BspTNI GGTCTC 2 cut(s) 277, 1839
BsrI ACTGG 3 cut(s) 98, 509, 1849
BssECI CCNNGG 2 cut(s) 813, 1576
BssNAI GTATAC 2 cut(s) 614, 810
BssT1I CCWWGG 1 cut(s) 813
Bst1107I GTATAC 2 cut(s) 614, 810
Bst2UI CCWGG 1 cut(s) 1577
Bst4CI ACNGT 4 cut(s) 268, 1205, 1232, 1870
Bst6I CTCTTC 5 cut(s) 223, 848, 1152, 2121, 2298
BstAFI CTTAAG 1 cut(s) 1981
BstAPI GCANNNNNTGC 1 cut(s) 1499
BstC8I GCNNGC 1 cut(s) 303
BstF5I GGATG 4 cut(s) 580, 1022, 1153, 2249
BstH2I RGCGCY 2 cut(s) 311, 2311
BstHHI GCGC 2 cut(s) 310, 2310
BstMAI GTCTC 7 cut(s) 132, 277, 455, 1211, 1478, 1714, 1839
BstMCI CGRYCG 1 cut(s) 163
BstMWI GCNNNNNNNGC 6 cut(s) 25, 307, 329, 422, 1437, 1499
BstNI CCWGG 1 cut(s) 1577
BstNSI RCATGY 1 cut(s) 76
BstPAI GACNNNNGTC 2 cut(s) 269, 1243
BstSCI CCNGG 1 cut(s) 1575
BstSFI CTRYAG 1 cut(s) 2285
BstV1I GCAGC 6 cut(s) 1322, 1766, 1890, 1901, 1904, 2333
BstV2I GAAGAC 2 cut(s) 1233, 1413
BstXI CCANNNNNNTGG 2 cut(s) 268, 1963
BstZ17I GTATAC 2 cut(s) 614, 810
BsuI GTATCC 1 cut(s) 2008
BsuRI GGCC 2 cut(s) 1083, 1288
BtsCI GGATG 4 cut(s) 580, 1022, 1153, 2249
BtsI GCAGTG 2 cut(s) 562, 1447
BtsIMutI CAGTG 7 cut(s) 105, 527, 562, 1110, 1447, 1483, 1605
Cac8I GCNNGC 1 cut(s) 303
CaiI CAGNNNCTG 1 cut(s) 302
CciI TCATGA 2 cut(s) 1716, 2020
CfoI GCGC 2 cut(s) 310, 2310
Cfr13I GGNCC 3 cut(s) 1082, 1108, 1909
CviAII CATG 6 cut(s) 73, 1529, 1552, 1717, 2021, 2052
DraIII CACNNNGTG 1 cut(s) 1532
DrdI GACNNNNNNGTC 1 cut(s) 910
DseDI GACNNNNNNGTC 1 cut(s) 910
Eam1104I CTCTTC 5 cut(s) 223, 848, 1152, 2121, 2298
EarI CTCTTC 5 cut(s) 223, 848, 1152, 2121, 2298
Eco130I CCWWGG 1 cut(s) 813
Eco31I GGTCTC 2 cut(s) 277, 1839
Eco47I GGWCC 2 cut(s) 1108, 1909
Eco57I CTGAAG 3 cut(s) 228, 818, 972
Eco88I CYCGRG 1 cut(s) 1835
EcoRI GAATTC 1 cut(s) 256
EcoRII CCWGG 1 cut(s) 1575
EcoT14I CCWWGG 1 cut(s) 813
EcoT22I ATGCAT 1 cut(s) 542
ErhI CCWWGG 1 cut(s) 813
FaeI CATG 6 cut(s) 76, 1532, 1555, 1720, 2024, 2055
FalI AAGNNNNNCTT 2 cut(s) 921, 953
FaqI GGGAC 1 cut(s) 916
FatI CATG 6 cut(s) 72, 1528, 1551, 1716, 2020, 2051
FauI CCCGC 1 cut(s) 352
FbaI TGATCA 1 cut(s) 1297
FblI GTMKAC 3 cut(s) 613, 809, 2200
Fnu4HI GCNGC 8 cut(s) 6, 306, 1336, 1755, 1879, 1890, 1893, 2322
FokI GGATG 4 cut(s) 587, 1009, 1160, 2256
Fsp4HI GCNGC 8 cut(s) 6, 306, 1336, 1755, 1879, 1890, 1893, 2322
FspBI CTAG 6 cut(s) 225, 1361, 1628, 1820, 1973, 2225
GlaI GCGC 2 cut(s) 309, 2309
GluI GCNGC 8 cut(s) 6, 306, 1336, 1755, 1879, 1890, 1893, 2322
GsuI CTGGAG 3 cut(s) 102, 954, 1607
HaeII RGCGCY 2 cut(s) 311, 2311
HaeIII GGCC 2 cut(s) 1083, 1288
HhaI GCGC 2 cut(s) 310, 2310
Hin1II CATG 6 cut(s) 76, 1532, 1555, 1720, 2024, 2055
Hin6I GCGC 2 cut(s) 308, 2308
HinP1I GCGC 2 cut(s) 308, 2308
HincII GTYRAC 1 cut(s) 490
HindII GTYRAC 1 cut(s) 490
HindIII AAGCTT 2 cut(s) 668, 1512
HpaI GTTAAC 1 cut(s) 490
HphI GGTGA 5 cut(s) 717, 1544, 1858, 2005, 2289
Hpy166II GTNNAC 6 cut(s) 490, 614, 664, 810, 1108, 2201
Hpy8I GTNNAC 6 cut(s) 490, 614, 664, 810, 1108, 2201
Hpy99I CGWCG 3 cut(s) 83, 1017, 1468
HpyAV CCTTC 9 cut(s) 841, 996, 1430, 1434, 1835, 1997, 2121, 2222, 2234
HpyCH4III ACNGT 4 cut(s) 268, 1205, 1232, 1870
HpyF10VI GCNNNNNNNGC 6 cut(s) 25, 307, 329, 422, 1437, 1499
Hsp92II CATG 6 cut(s) 76, 1532, 1555, 1720, 2024, 2055
HspAI GCGC 2 cut(s) 308, 2308
Ksp22I TGATCA 1 cut(s) 1297
KspAI GTTAAC 1 cut(s) 490
LguI GCTCTTC 1 cut(s) 2298
LmnI GCTCC 3 cut(s) 121, 961, 973
Lsp1109I GCAGC 6 cut(s) 1322, 1766, 1890, 1901, 1904, 2333
LweI GCATC 5 cut(s) 565, 1031, 1785, 1865, 2234
MaeI CTAG 6 cut(s) 225, 1361, 1628, 1820, 1973, 2225
MaeIII GTNAC 1 cut(s) 1993
MfeI CAATTG 2 cut(s) 657, 1134
MhlI GDGCHC 1 cut(s) 643
MlyI GAGTC 4 cut(s) 134, 1301, 1517, 1990
MmeI TCCRAC 2 cut(s) 1446, 1500
Mph1103I ATGCAT 1 cut(s) 542
MseI TTAA 6 cut(s) 489, 869, 939, 1383, 1982, 2363
MslI CAYNNNNRTG 1 cut(s) 1807
MspA1I CMGCKG 2 cut(s) 351, 1757
MspCI CTTAAG 1 cut(s) 1981
MspR9I CCNGG 1 cut(s) 1577
MunI CAATTG 2 cut(s) 657, 1134
Mva1269I GAATGC 5 cut(s) 601, 1348, 1361, 1587, 1957
MvaI CCWGG 1 cut(s) 1577
MwoI GCNNNNNNNGC 6 cut(s) 25, 307, 329, 422, 1437, 1499
NlaIII CATG 6 cut(s) 76, 1532, 1555, 1720, 2024, 2055
NlaIV GGNNCC 2 cut(s) 957, 1084
NmuCI GTSAC 1 cut(s) 1993
NsiI ATGCAT 1 cut(s) 542
NspI RCATGY 1 cut(s) 76
PaeR7I CTCGAG 1 cut(s) 1835
PagI TCATGA 2 cut(s) 1716, 2020
PciI ACATGT 1 cut(s) 72
PciSI GCTCTTC 1 cut(s) 2298
PctI GAATGC 5 cut(s) 601, 1348, 1361, 1587, 1957
PfeI GAWTC 8 cut(s) 440, 470, 505, 722, 858, 1028, 1326, 1372
Pfl23II CGTACG 1 cut(s) 1870
PflMI CCANNNNNTGG 1 cut(s) 1515
PkrI GCNGC 8 cut(s) 7, 307, 1337, 1756, 1880, 1891, 1894, 2323
Ple19I CGATCG 1 cut(s) 163
PleI GAGTC 4 cut(s) 133, 1300, 1517, 1990
PpsI GAGTC 4 cut(s) 133, 1300, 1517, 1990
PscI ACATGT 1 cut(s) 72
PshAI GACNNNNGTC 2 cut(s) 269, 1243
Psp6I CCWGG 1 cut(s) 1575
PspGI CCWGG 1 cut(s) 1575
PspLI CGTACG 1 cut(s) 1870
PspN4I GGNNCC 2 cut(s) 957, 1084
PspPI GGNCC 3 cut(s) 1082, 1108, 1909
PspXI VCTCGAGB 1 cut(s) 1835
PsrI GAACNNNNNNTAC 4 cut(s) 759, 791, 2115, 2147
PstI CTGCAG 1 cut(s) 2289
PstNI CAGNNNCTG 1 cut(s) 302
PvuI CGATCG 1 cut(s) 163
PvuII CAGCTG 1 cut(s) 1757
RseI CAYNNNNRTG 1 cut(s) 1807
SapI GCTCTTC 1 cut(s) 2298
SaqAI TTAA 6 cut(s) 489, 869, 939, 1383, 1982, 2363
SatI GCNGC 8 cut(s) 6, 306, 1336, 1755, 1879, 1890, 1893, 2322
Sau96I GGNCC 3 cut(s) 1082, 1108, 1909
ScaI AGTACT 3 cut(s) 456, 1453, 1833
SchI GAGTC 4 cut(s) 134, 1301, 1517, 1990
ScrFI CCNGG 1 cut(s) 1577
SduI GDGCHC 1 cut(s) 643
SfaNI GCATC 5 cut(s) 565, 1031, 1785, 1865, 2234
SfcI CTRYAG 1 cut(s) 2285
Sfr274I CTCGAG 1 cut(s) 1835
SinI GGWCC 2 cut(s) 1108, 1909
SlaI CTCGAG 1 cut(s) 1835
SmiMI CAYNNNNRTG 1 cut(s) 1807
SmlI CTYRAG 5 cut(s) 458, 671, 1835, 1884, 1981
SmoI CTYRAG 5 cut(s) 458, 671, 1835, 1884, 1981
SpeI ACTAGT 2 cut(s) 1627, 1819
SsiI CCGC 4 cut(s) 305, 351, 359, 1099
SspMI CTAG 6 cut(s) 225, 1361, 1628, 1820, 1973, 2225
StyD4I CCNGG 1 cut(s) 1575
StyI CCWWGG 1 cut(s) 813
TaaI ACNGT 4 cut(s) 268, 1205, 1232, 1870
TatI WGTACW 6 cut(s) 105, 454, 1197, 1451, 1831, 2131
TauI GCSGC 1 cut(s) 308
TfiI GAWTC 8 cut(s) 440, 470, 505, 722, 858, 1028, 1326, 1372
Tru1I TTAA 6 cut(s) 489, 869, 939, 1383, 1982, 2363
Tru9I TTAA 6 cut(s) 489, 869, 939, 1383, 1982, 2363
TscAI CASTG 7 cut(s) 105, 534, 562, 1110, 1447, 1483, 1612
TseFI GTSAC 1 cut(s) 1993
TseI GCWGC 7 cut(s) 5, 1335, 1754, 1878, 1889, 1892, 2321
Tsp45I GTSAC 1 cut(s) 1993
TspGWI ACGGA 1 cut(s) 1030
TspRI CASTG 7 cut(s) 105, 534, 562, 1110, 1447, 1483, 1612
Van91I CCANNNNNTGG 1 cut(s) 1515
Vha464I CTTAAG 1 cut(s) 1981
VpaK11BI GGWCC 2 cut(s) 1108, 1909
XapI RAATTY 8 cut(s) 256, 547, 941, 1060, 1617, 1649, 1690, 2268
XbaI TCTAGA 1 cut(s) 224
XceI RCATGY 1 cut(s) 76
XcmI CCANNNNNNNNNTGG 2 cut(s) 331, 1516
XhoI CTCGAG 1 cut(s) 1835
XmiI GTMKAC 3 cut(s) 613, 809, 2200
XspI CTAG 6 cut(s) 225, 1361, 1628, 1820, 1973, 2225
ZrmI AGTACT 3 cut(s) 456, 1453, 1833
Zsp2I ATGCAT 1 cut(s) 542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.