Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0004410

Physical Location & Seq

Genomic Coordinates Forward (+)

13851910 .. 13856966

Gene Structure 5057 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g20780.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2535 bp

ATGGTGAAGATGAAACTAGTGAGTTGGGTACCATTGGTTTTGGGTATTGTTGTGTTTATGAGTCATGGAGCCTTTGGTTTATTTAATCCTGTTGATAACTACTTGATTGCTTGTGGTTCTTCGAAAAATGTCACCTTCCAAGGCCGAACCTTTGTTCCTGATACACTGCAATCTTCCGTTGTACTGAAAAGTGCAAATTCTTTAGTTGCTAGCTCCAGTTCCAATGCCCCTTCTCCTATTTACCAATCTGCTCGAATTTTCAAAGAAACATCTTCCTATAAGTTCAAAATTCGCCAAGAAGGCCGGCATTGGGTCCGCCTTTATTTCTACCCGTTAGCAAACTCAGGCCAAAACTTGAAGACTGCTCTGATAACTGTGGTCACTGATAGCTTTGTACTCTTGAACAACTTTACTTTCGAGAACTATAATGGTTCTTATTTGTTCAAGGAGTTTGCACTCAATGTTACTTCAGATAGTTTGACCCTCACCATCATTCCTTCAAACAGTTCAGTTGCTTTTGTTAATGCAATTGAAGTGGTCTCGATCCCGGATGAACTAATCCCTGATCAGGCATATGGTGTAAATCCATCTGCTCCTTTTAGTGGCCTTTCCGCACTTGGGCTTCAAACAATGTACCGATTAAACATGGGGGGTCCTTTACTCACAGCTGACAATGATACCCTTAAAAGAACTTGGGAGAATGATGTGAAATACCTTCATGTCGACAGCTCTGCAGTGAATGTATCAATCAACCCTGCCAGCGTGAAGTATCCGGTGGCTGTCACACCAGAGATAGCACCAAACTGGGTCTATGCCACTGCTGAAGCCATGGGAGATGCAAATGTGCCAAATGGGAACTTCAACATAACTTGGGTCTTCCCGGCAGACCCAAATTACTTGTATCTTGTTCGGGTACATTTCTGTGATATTGTCAGCAAGGCATTGAATAACCTAGTTTTCAATGTTTTCATCAATTCCGACAATGTGCTCTCGAGTCTCGACCTCTCCTCCATTACTGGTGACTTGGGTGTGCCGTACTACAAAGACTTTGTTTCCAACTCCTCAGCAGATTCAAATACTTTGACAGTCAGTGTTGGTCCAGATTCAATGGCTGATGTCTCTAATGCAATTCTAAATGGCTTGGAGATTTTGAAGATCAGCAATGACTTGGGGAGCTTGGATGGGTCTTTGTCTGTCCAGAGTCTCCTTCCCAGTTCATCCTCAAAGAGTAATAACATAGTAATCATTGTTGGGTGTGTTATTGGAGCTGTAGCTCTTGTGGCAATTATTGTTCTCTTGTATTGCTGCTTGGCATCTCGCAAGTCAAAGACTACTCCTAACCAAGGTCCTCCATGGCTGCTTCTCCCCTTGTATGGAAACTCTCAGACAATGACCAAAATGTCAACAACTTCACAAAAGAGTGGAACAGCTAGCTGCATCTCATTAGCTTCCTCTAATCTTGGCCACATATTCATGTTCCAAGAAATCCTGGATGCAACCAACAAATTTGATGAGAGCCTACTTCTCGGGGTTGGTGGTTTTGGCAGGGTTTACAAGGGAACACTAGAAGATGGGACAAAAGTAGCTGTTAAAAGAGGAAACTCTAGATCAGAACAAGGTATTGCTGAATTCCGAACTGAGATTGAAATGTTATCGAAGCTTCGTCACCGCCACCTTGTGTCTCTTATTGGCTATTGTGATGAGAGGTCAGAGATGATACTTGTGTATGAATACATGGCTAATGGACCGCTCCGCAGCCATTTGTATGGAACAGATTTGCCAACCCTATCATGGAAGCTACGCCTTGAAATTTGCATTGGGGCTGCAAGAGGACTCCATTATCTCCATACCGGTGCAGCTCAAAGCATAATTCACCGAGATGTGAAGACAACAAACATTCTCTTGGATGAGAACTTTGTAGCCAAAGTTGCAGATTTTGGCCTCTCAAAAGCAGGTCCAGCTATAGATCAGACTCATGTCAGTACTGCTGTTAAGGGTAGTTTTGGTTACCTTGATCCTGAATACTTTAGAAGGCAGCAGCTCACTGAGAAATCAGATGTGTATTCGTTTGGTGTAGTTCTAATGGAAGTTCTTTGCACAAGACCAGCTTTGAACCCAGTTCTTCCCAGAGAGCAAGTGAACATAGCAGAATGGGCAATGGCCTGGCAAAAGAAGGGTATGCTGGACCAAATCATGGACTCGAATCTGGCTGGGAAGGTAAATCCAGCTTCTCTTAAGAAGTATGGTGAGACAGCTGAGAAGTGCCTTGCCGAGTATGGTGTTGACAGGCCATCAATGGGAGATGTCTTGTGGAATCTTGAATATGCTCTTCAGCTTGAGGAAACTTCTTCTGCGCTCATGGAACCTGAAGATAACAGCACAAACCACATACGAGACATTGAATTGACACCACTAGAGCCATTTGACAACAGTGTGAGTATGATTGAGGGAGGGCACTCCGGCACTGATGATGACGCTGAAGATGCTGCCACAAGTGCTGTGTTCTCTCAGCTAGTTAATCCTCGTGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

845

Amino Acids

92.11

Weight (kDa)

5.34

Isoelectric Point (pI)

39.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	36 - 385	7.6e-30	Malectin-like domain
Pkinase	PF00069	508 - 717	4.4e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	509 - 731	1.4e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54380
fragaria_vesca	FvH4_2g16820 FvH4_2g16820 FvH4_3g20780 FvH4_3g20780 FvH4_3g20780
malus_domestica	MD03G1221300.v1.1 MD11G1238700.v1.1
prunus_persica	Prupe.4G188000_v2.0.a1
pyrus_communis	pycom03g17020 pycom11g21030
rosa_chinensis	RchiOBHm_Chr5g0035071 RchiOBHm_Chr6g0280941
rosa_laevigata	RLG00000013014 RLG00000033592
rosa_multiflora	Rmu_sc0005362.1_g000028 Rmu_sc0023551.1_g000001 Rmu_sc0023552.1_g000001
rosa_roxburghii	Rroxscaffold_1G00045340 Rroxscaffold_7G00187470
rosa_rugosa	Rorug05G0149600 Rorug06G0137100
rosa_samantha	Rh5AG242600 Rh5BG242200 Rh5CG273700 Rh5DG250800 Rh6AG249400 Rh6BG251500 Rh6CG252100 Rh6DG243900
rosa_wichuraiana	Rw5G022160 Rw6G021580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1399
Acc36I	ACCTGC	1 cut(s)	1943
Acc65I	GGTACC	1 cut(s)	28
AccB1I	GGYRCC	1 cut(s)	28
AccB7I	CCANNNNNTGG	1 cut(s)	2194
AccBSI	CCGCTC	1 cut(s)	1750
AccI	GTMKAC	1 cut(s)	723
AciI	CCGC	5 cut(s)	316, 612, 1669, 1748, 1753
AclWI	GGATC	2 cut(s)	538, 2009
AcoI	YGGCCR	1 cut(s)	1462
AcsI	RAATTY	6 cut(s)	196, 255, 288, 1505, 1628, 1809
AcuI	CTGAAG	5 cut(s)	453, 843, 2315, 2388, 2499
AdeI	CACNNNGTG	1 cut(s)	1678
AfaI	GTAC	7 cut(s)	30, 183, 396, 635, 915, 1037, 1984
AfiI	CCNNNNNNNGG	9 cut(s)	310, 568, 602, 618, 1343, 1373, 1791, 2194, 2297
AflII	CTTAAG	1 cut(s)	2234
AgeI	ACCGGT	1 cut(s)	1850
AhlI	ACTAGT	1 cut(s)	16
AjnI	CCWGG	2 cut(s)	1488, 2162
AjuI	GAANNNNNNNTTGG	2 cut(s)	1800, 1832
AloI	GAACNNNNNNTCC	2 cut(s)	139, 171
Alw21I	GWGCWC	1 cut(s)	990
Alw26I	GTCTC	7 cut(s)	544, 1001, 1123, 1208, 1686, 2243, 2388
AlwI	GGATC	2 cut(s)	538, 2009
Ama87I	CYCGRG	2 cut(s)	991, 1526
AoxI	GGCC	8 cut(s)	142, 301, 346, 604, 1462, 1939, 2160, 2288
ApeKI	GCWGC	9 cut(s)	1305, 1357, 1434, 1755, 1823, 1856, 2035, 2038, 2486
ApoI	RAATTY	6 cut(s)	196, 255, 288, 1505, 1628, 1809
AsiGI	ACCGGT	1 cut(s)	1850
Asp718I	GGTACC	1 cut(s)	28
AspLEI	GCGC	1 cut(s)	2356
AspS9I	GGNCC	7 cut(s)	313, 653, 1097, 1346, 1745, 1955, 2185
AsuC2I	CCSGG	2 cut(s)	548, 881
AsuHPI	GGTGA	7 cut(s)	16, 124, 478, 1031, 1658, 1865, 2258
AsuII	TTCGAA	1 cut(s)	122
AsuNHI	GCTAGC	2 cut(s)	209, 1430
AvaI	CYCGRG	2 cut(s)	991, 1526
AvaII	GGWCC	7 cut(s)	313, 653, 1097, 1346, 1745, 1955, 2185
BaeGI	GKGCMC	1 cut(s)	2457
BaeI	ACNNNNGTAYC	2 cut(s)	1709, 1742
BalI	TGGCCA	1 cut(s)	1464
BanI	GGYRCC	1 cut(s)	28
BauI	CACGAG	1 cut(s)	2523
BbsI	GAAGAC	3 cut(s)	365, 868, 1892
Bbv12I	GWGCWC	1 cut(s)	990
BbvCI	CCTCAGC	1 cut(s)	1063
BbvI	GCAGC	9 cut(s)	1292, 1344, 1421, 1767, 1810, 1868, 2047, 2050, 2473
BccI	CCATC	5 cut(s)	497, 595, 1175, 1565, 2299
BceAI	ACGGC	1 cut(s)	1018
BcgI	CGANNNNNNTGC	2 cut(s)	713, 747
BciT130I	CCWGG	2 cut(s)	1490, 2164
BciVI	GTATCC	1 cut(s)	780
BclI	TGATCA	1 cut(s)	565
BcnI	CCSGG	2 cut(s)	548, 881
BcoDI	GTCTC	7 cut(s)	544, 1001, 1123, 1208, 1686, 2243, 2388
BcuI	ACTAGT	1 cut(s)	16
BfaI	CTAG	8 cut(s)	17, 210, 953, 1431, 1565, 1605, 2414, 2513
BfmI	CTRYAG	3 cut(s)	732, 1269, 1962
BfrI	CTTAAG	1 cut(s)	2234
BfuAI	ACCTGC	1 cut(s)	1943
BfuI	GTATCC	1 cut(s)	780
BglI	GCCNNNNNGGC	1 cut(s)	300
BisI	GCNGC	9 cut(s)	1306, 1358, 1435, 1756, 1824, 1857, 2036, 2039, 2487
BlsI	GCNGC	9 cut(s)	1307, 1359, 1436, 1757, 1825, 1858, 2037, 2040, 2488
BmcAI	AGTACT	1 cut(s)	1984
Bme1390I	CCNGG	4 cut(s)	548, 881, 1490, 2164
Bme18I	GGWCC	7 cut(s)	313, 653, 1097, 1346, 1745, 1955, 2185
BmeT110I	CYCGRG	2 cut(s)	991, 1526
BmgT120I	GGNCC	7 cut(s)	313, 653, 1097, 1346, 1745, 1955, 2185
BmiI	GGNNCC	5 cut(s)	30, 70, 314, 654, 2364
BmrFI	CCNGG	4 cut(s)	548, 881, 1490, 2164
BmrI	ACTGGG	3 cut(s)	814, 1206, 2111
BmsI	GCATC	5 cut(s)	826, 1322, 1446, 1483, 2473
BmtI	GCTAGC	2 cut(s)	213, 1434
BmuI	ACTGGG	3 cut(s)	814, 1206, 2111
BoxI	GACNNNNGTC	1 cut(s)	1976
BpiI	GAAGAC	3 cut(s)	365, 868, 1892
BpmI	CTGGAG	1 cut(s)	199
Bpu10I	CCTNAGC	1 cut(s)	1063
Bpu14I	TTCGAA	1 cut(s)	122
BpuEI	CTTGAG	1 cut(s)	2357
BpuMI	CCSGG	2 cut(s)	548, 881
BsaI	GGTCTC	1 cut(s)	544
BsaJI	CCNNGG	4 cut(s)	139, 828, 1342, 1352
BsaWI	WCCGGW	2 cut(s)	772, 1850
BsaXI	ACNNNNNCTCC	2 cut(s)	992, 1022
Bsc4I	CCNNNNNNNGG	9 cut(s)	310, 568, 602, 618, 1343, 1373, 1791, 2194, 2297
Bse118I	RCCGGY	2 cut(s)	303, 1850
Bse1I	ACTGG	5 cut(s)	216, 809, 1021, 1212, 2117
Bse3DI	GCAATG	2 cut(s)	1168, 2163
BseBI	CCWGG	2 cut(s)	1490, 2164
BseDI	CCNNGG	4 cut(s)	139, 828, 1342, 1352
BseGI	GGATG	5 cut(s)	556, 1186, 1217, 1498, 1912
BseLI	CCNNNNNNNGG	9 cut(s)	310, 568, 602, 618, 1343, 1373, 1791, 2194, 2297
BseMI	GCAATG	2 cut(s)	1168, 2163
BseMII	CTCAG	7 cut(s)	357, 1077, 1397, 1629, 2037, 2247, 2522
BseNI	ACTGG	5 cut(s)	216, 809, 1021, 1212, 2117
BseRI	GAGGAG	2 cut(s)	997, 1051
BseSI	GKGCMC	1 cut(s)	2457
BseXI	GCAGC	9 cut(s)	1292, 1344, 1421, 1767, 1810, 1868, 2047, 2050, 2473
BseYI	CCCAGC	1 cut(s)	2210
BsgI	GTGCAG	1 cut(s)	1875
BshFI	GGCC	8 cut(s)	144, 303, 348, 606, 1464, 1941, 2162, 2290
BshNI	GGYRCC	1 cut(s)	28
BshTI	ACCGGT	1 cut(s)	1850
BsiHKAI	GWGCWC	1 cut(s)	990
BsiHKCI	CYCGRG	2 cut(s)	991, 1526
BsiSI	CCGG	6 cut(s)	304, 548, 773, 881, 1851, 2460
BslFI	GGGAC	1 cut(s)	1588
BslI	CCNNNNNNNGG	9 cut(s)	310, 568, 602, 618, 1343, 1373, 1791, 2194, 2297
BsmAI	GTCTC	7 cut(s)	544, 1001, 1123, 1208, 1686, 2243, 2388
BsmFI	GGGAC	1 cut(s)	1588
BsnI	GGCC	8 cut(s)	144, 303, 348, 606, 1464, 1941, 2162, 2290
Bso31I	GGTCTC	1 cut(s)	544
BsoBI	CYCGRG	2 cut(s)	991, 1526
Bsp119I	TTCGAA	1 cut(s)	122
Bsp1286I	GDGCHC	2 cut(s)	990, 2457
Bsp143I	GATC	6 cut(s)	543, 565, 1155, 1607, 1966, 2014
Bsp19I	CCATGG	2 cut(s)	828, 1352
BspACI	CCGC	5 cut(s)	316, 612, 1669, 1748, 1753
BspANI	GGCC	8 cut(s)	144, 303, 348, 606, 1464, 1941, 2162, 2290
BspCNI	CTCAG	7 cut(s)	356, 1076, 1396, 1630, 2038, 2248, 2521
BspLI	GGNNCC	5 cut(s)	30, 70, 314, 654, 2364
BspMAI	CTGCAG	1 cut(s)	736
BspMI	ACCTGC	1 cut(s)	1943
BspOI	GCTAGC	2 cut(s)	213, 1434
BspPI	GGATC	2 cut(s)	538, 2009
BspQI	GCTCTTC	1 cut(s)	2334
BspT104I	TTCGAA	1 cut(s)	122
BspT107I	GGYRCC	1 cut(s)	28
BspTI	CTTAAG	1 cut(s)	2234
BspTNI	GGTCTC	1 cut(s)	544
BsrBI	CCGCTC	1 cut(s)	1750
BsrDI	GCAATG	2 cut(s)	1168, 2163
BsrFI	RCCGGY	2 cut(s)	303, 1850
BsrI	ACTGG	5 cut(s)	216, 809, 1021, 1212, 2117
BssAI	RCCGGY	2 cut(s)	303, 1850
BssECI	CCNNGG	4 cut(s)	139, 828, 1342, 1352
BssMI	GATC	6 cut(s)	543, 565, 1155, 1607, 1966, 2014
BssSI	CACGAG	1 cut(s)	2523
BssT1I	CCWWGG	4 cut(s)	139, 828, 1342, 1352
Bst2BI	CACGAG	1 cut(s)	2523
Bst2UI	CCWGG	2 cut(s)	1490, 2164
Bst4CI	ACNGT	4 cut(s)	376, 506, 1087, 2432
Bst6I	CTCTTC	1 cut(s)	2334
BstAFI	CTTAAG	1 cut(s)	2234
BstBI	TTCGAA	1 cut(s)	122
BstC8I	GCNNGC	4 cut(s)	211, 305, 760, 1432
BstDEI	CTNAG	7 cut(s)	343, 1063, 1383, 1638, 2046, 2256, 2508
BstDSI	CCRYGG	2 cut(s)	828, 1352
BstEII	GGTNACC	1 cut(s)	2006
BstENI	CCTNNNNNAGG	1 cut(s)	1341
BstF5I	GGATG	5 cut(s)	556, 1186, 1217, 1498, 1912
BstHHI	GCGC	1 cut(s)	2356
BstKTI	GATC	6 cut(s)	546, 568, 1158, 1610, 1969, 2017
BstMAI	GTCTC	7 cut(s)	544, 1001, 1123, 1208, 1686, 2243, 2388
BstMBI	GATC	6 cut(s)	543, 565, 1155, 1607, 1966, 2014
BstMWI	GCNNNNNNNGC	7 cut(s)	300, 1280, 1928, 1958, 2153, 2483, 2495
BstNI	CCWGG	2 cut(s)	1490, 2164
BstPAI	GACNNNNGTC	1 cut(s)	1976
BstPI	GGTNACC	1 cut(s)	2006
BstSCI	CCNGG	4 cut(s)	546, 879, 1488, 2162
BstSFI	CTRYAG	3 cut(s)	732, 1269, 1962
BstSLI	GKGCMC	1 cut(s)	2457
BstV1I	GCAGC	9 cut(s)	1292, 1344, 1421, 1767, 1810, 1868, 2047, 2050, 2473
BstV2I	GAAGAC	3 cut(s)	365, 868, 1892
BstXI	CCANNNNNNTGG	1 cut(s)	1766
BsuI	GTATCC	1 cut(s)	780
BsuRI	GGCC	8 cut(s)	144, 303, 348, 606, 1464, 1941, 2162, 2290
BtgI	CCRYGG	2 cut(s)	828, 1352
BtsCI	GGATG	5 cut(s)	556, 1186, 1217, 1498, 1912
BtsI	GCAGTG	3 cut(s)	164, 741, 816
BtsIMutI	CAGTG	8 cut(s)	164, 381, 741, 816, 1096, 2043, 2437, 2463
BveI	ACCTGC	1 cut(s)	1943
Cac8I	GCNNGC	4 cut(s)	211, 305, 760, 1432
CfoI	GCGC	1 cut(s)	2356
Cfr10I	RCCGGY	2 cut(s)	303, 1850
Cfr13I	GGNCC	7 cut(s)	313, 653, 1097, 1346, 1745, 1955, 2185
CseI	GACGC	1 cut(s)	2483
Csp6I	GTAC	7 cut(s)	29, 182, 395, 634, 914, 1036, 1983
CspAI	ACCGGT	1 cut(s)	1850
CspCI	CAANNNNNGTGG	2 cut(s)	516, 551
CviQI	GTAC	7 cut(s)	29, 182, 395, 634, 914, 1036, 1983
DdeI	CTNAG	7 cut(s)	343, 1063, 1383, 1638, 2046, 2256, 2508
DpnI	GATC	6 cut(s)	545, 567, 1157, 1609, 1968, 2016
DpnII	GATC	6 cut(s)	543, 565, 1155, 1607, 1966, 2014
DraIII	CACNNNGTG	1 cut(s)	1678
DrdI	GACNNNNNNGTC	1 cut(s)	1399
DseDI	GACNNNNNNGTC	1 cut(s)	1399
EaeI	YGGCCR	1 cut(s)	1462
Eam1104I	CTCTTC	1 cut(s)	2334
EarI	CTCTTC	1 cut(s)	2334
EciI	GGCGGA	1 cut(s)	305
Eco130I	CCWWGG	4 cut(s)	139, 828, 1342, 1352
Eco31I	GGTCTC	1 cut(s)	544
Eco47I	GGWCC	7 cut(s)	313, 653, 1097, 1346, 1745, 1955, 2185
Eco57I	CTGAAG	5 cut(s)	453, 843, 2315, 2388, 2499
Eco88I	CYCGRG	2 cut(s)	991, 1526
Eco91I	GGTNACC	1 cut(s)	2006
EcoNI	CCTNNNNNAGG	1 cut(s)	1341
EcoO109I	RGGNCCY	2 cut(s)	653, 1346
EcoO65I	GGTNACC	1 cut(s)	2006
EcoRI	GAATTC	1 cut(s)	1628
EcoRII	CCWGG	2 cut(s)	1488, 2162
EcoT14I	CCWWGG	4 cut(s)	139, 828, 1342, 1352
ErhI	CCWWGG	4 cut(s)	139, 828, 1342, 1352
FalI	AAGNNNNNCTT	2 cut(s)	2092, 2124
FaqI	GGGAC	1 cut(s)	1588
FauNDI	CATATG	1 cut(s)	574
FbaI	TGATCA	1 cut(s)	565
FblI	GTMKAC	1 cut(s)	723
Fnu4HI	GCNGC	9 cut(s)	1306, 1358, 1435, 1756, 1824, 1857, 2036, 2039, 2487
FokI	GGATG	5 cut(s)	563, 1193, 1204, 1505, 1919
Fsp4HI	GCNGC	9 cut(s)	1306, 1358, 1435, 1756, 1824, 1857, 2036, 2039, 2487
FspBI	CTAG	8 cut(s)	17, 210, 953, 1431, 1565, 1605, 2414, 2513
GlaI	GCGC	1 cut(s)	2355
GluI	GCNGC	9 cut(s)	1306, 1358, 1435, 1756, 1824, 1857, 2036, 2039, 2487
GsaI	CCCAGC	1 cut(s)	2214
GsuI	CTGGAG	1 cut(s)	199
HaeIII	GGCC	8 cut(s)	144, 303, 348, 606, 1464, 1941, 2162, 2290
HapII	CCGG	6 cut(s)	304, 548, 773, 881, 1851, 2460
HgaI	GACGC	1 cut(s)	2483
HhaI	GCGC	1 cut(s)	2356
Hin6I	GCGC	1 cut(s)	2354
HinP1I	GCGC	1 cut(s)	2354
HincII	GTYRAC	3 cut(s)	724, 1404, 2284
HindII	GTYRAC	3 cut(s)	724, 1404, 2284
HindIII	AAGCTT	1 cut(s)	1658
HpaII	CCGG	6 cut(s)	304, 548, 773, 881, 1851, 2460
HphI	GGTGA	7 cut(s)	16, 124, 478, 1031, 1658, 1865, 2258
Hpy166II	GTNNAC	5 cut(s)	724, 1404, 1552, 2140, 2284
Hpy188I	TCNGA	9 cut(s)	369, 472, 979, 1386, 1612, 1634, 1711, 1971, 2056
Hpy8I	GTNNAC	5 cut(s)	724, 1404, 1552, 2140, 2284
HpyAV	CCTTC	9 cut(s)	145, 240, 293, 507, 725, 1217, 2025, 2167, 2209
HpyCH4III	ACNGT	4 cut(s)	376, 506, 1087, 2432
HpyF10VI	GCNNNNNNNGC	7 cut(s)	300, 1280, 1928, 1958, 2153, 2483, 2495
HpyF3I	CTNAG	7 cut(s)	343, 1063, 1383, 1638, 2046, 2256, 2508
HspAI	GCGC	1 cut(s)	2354
KpnI	GGTACC	1 cut(s)	32
KroI	GCCGGC	1 cut(s)	303
KroNI	GCCGGC	1 cut(s)	305
Ksp22I	TGATCA	1 cut(s)	565
Kzo9I	GATC	6 cut(s)	543, 565, 1155, 1607, 1966, 2014
LguI	GCTCTTC	1 cut(s)	2334
LmnI	GCTCC	6 cut(s)	68, 218, 598, 1173, 1265, 1755
Lsp1109I	GCAGC	9 cut(s)	1292, 1344, 1421, 1767, 1810, 1868, 2047, 2050, 2473
LweI	GCATC	5 cut(s)	826, 1322, 1446, 1483, 2473
MaeI	CTAG	8 cut(s)	17, 210, 953, 1431, 1565, 1605, 2414, 2513
MaeIII	GTNAC	7 cut(s)	130, 379, 463, 781, 1019, 1664, 2006
MalI	GATC	6 cut(s)	545, 567, 1157, 1609, 1968, 2016
MbiI	CCGCTC	1 cut(s)	1750
MboI	GATC	6 cut(s)	543, 565, 1155, 1607, 1966, 2014
MfeI	CAATTG	1 cut(s)	528
MhlI	GDGCHC	2 cut(s)	990, 2457
MlsI	TGGCCA	1 cut(s)	1464
MluNI	TGGCCA	1 cut(s)	1464
MlyI	GAGTC	6 cut(s)	70, 1003, 1210, 1827, 1966, 2192
MmeI	TCCRAC	2 cut(s)	1002, 1080
Mox20I	TGGCCA	1 cut(s)	1464
MroNI	GCCGGC	1 cut(s)	303
MscI	TGGCCA	1 cut(s)	1464
MseI	TTAA	8 cut(s)	84, 522, 641, 684, 1590, 1992, 2235, 2517
MslI	CAYNNNNRTG	5 cut(s)	921, 1472, 1764, 1851, 1878
Msp20I	TGGCCA	1 cut(s)	1464
MspA1I	CMGCKG	2 cut(s)	668, 2255
MspCI	CTTAAG	1 cut(s)	2234
MspI	CCGG	6 cut(s)	304, 548, 773, 881, 1851, 2460
MspR9I	CCNGG	4 cut(s)	548, 881, 1490, 2164
MunI	CAATTG	1 cut(s)	528
MvaI	CCWGG	2 cut(s)	1490, 2164
MwoI	GCNNNNNNNGC	7 cut(s)	300, 1280, 1928, 1958, 2153, 2483, 2495
NaeI	GCCGGC	1 cut(s)	305
NciI	CCSGG	2 cut(s)	548, 881
NcoI	CCATGG	2 cut(s)	828, 1352
NdeI	CATATG	1 cut(s)	574
NdeII	GATC	6 cut(s)	543, 565, 1155, 1607, 1966, 2014
NgoMIV	GCCGGC	1 cut(s)	303
NheI	GCTAGC	2 cut(s)	209, 1430
NlaIV	GGNNCC	5 cut(s)	30, 70, 314, 654, 2364
NmeAIII	GCCGAG	1 cut(s)	2296
NmuCI	GTSAC	5 cut(s)	130, 379, 781, 1019, 1664
NspV	TTCGAA	1 cut(s)	122
PaeR7I	CTCGAG	1 cut(s)	991
PciSI	GCTCTTC	1 cut(s)	2334
PdiI	GCCGGC	1 cut(s)	305
PfeI	GAWTC	4 cut(s)	1070, 1103, 2203, 2314
PflMI	CCANNNNNTGG	1 cut(s)	2194
PfoI	TCCNGGA	2 cut(s)	546, 1488
PinAI	ACCGGT	1 cut(s)	1850
PkrI	GCNGC	9 cut(s)	1307, 1359, 1436, 1757, 1825, 1858, 2037, 2040, 2488
PleI	GAGTC	6 cut(s)	69, 1002, 1209, 1827, 1966, 2192
PpsI	GAGTC	6 cut(s)	69, 1002, 1209, 1827, 1966, 2192
PpuMI	RGGWCCY	2 cut(s)	653, 1346
PshAI	GACNNNNGTC	1 cut(s)	1976
Psp5II	RGGWCCY	2 cut(s)	653, 1346
Psp6I	CCWGG	2 cut(s)	1488, 2162
PspEI	GGTNACC	1 cut(s)	2006
PspFI	CCCAGC	1 cut(s)	2210
PspGI	CCWGG	2 cut(s)	1488, 2162
PspN4I	GGNNCC	5 cut(s)	30, 70, 314, 654, 2364
PspPI	GGNCC	7 cut(s)	313, 653, 1097, 1346, 1745, 1955, 2185
PspPPI	RGGWCCY	2 cut(s)	653, 1346
PstI	CTGCAG	1 cut(s)	736
PvuII	CAGCTG	2 cut(s)	668, 2255
RsaI	GTAC	7 cut(s)	30, 183, 396, 635, 915, 1037, 1984
RsaNI	GTAC	7 cut(s)	29, 182, 395, 634, 914, 1036, 1983
RseI	CAYNNNNRTG	5 cut(s)	921, 1472, 1764, 1851, 1878
SalI	GTCGAC	1 cut(s)	722
SapI	GCTCTTC	1 cut(s)	2334
SaqAI	TTAA	8 cut(s)	84, 522, 641, 684, 1590, 1992, 2235, 2517
SatI	GCNGC	9 cut(s)	1306, 1358, 1435, 1756, 1824, 1857, 2036, 2039, 2487
Sau3AI	GATC	6 cut(s)	543, 565, 1155, 1607, 1966, 2014
Sau96I	GGNCC	7 cut(s)	313, 653, 1097, 1346, 1745, 1955, 2185
ScaI	AGTACT	1 cut(s)	1984
SchI	GAGTC	6 cut(s)	70, 1003, 1210, 1827, 1966, 2192
ScrFI	CCNGG	4 cut(s)	548, 881, 1490, 2164
SduI	GDGCHC	2 cut(s)	990, 2457
SfaNI	GCATC	5 cut(s)	826, 1322, 1446, 1483, 2473
SfcI	CTRYAG	3 cut(s)	732, 1269, 1962
Sfr274I	CTCGAG	1 cut(s)	991
SfuI	TTCGAA	1 cut(s)	122
SinI	GGWCC	7 cut(s)	313, 653, 1097, 1346, 1745, 1955, 2185
SlaI	CTCGAG	1 cut(s)	991
SmiMI	CAYNNNNRTG	5 cut(s)	921, 1472, 1764, 1851, 1878
SmlI	CTYRAG	3 cut(s)	991, 2234, 2336
SmoI	CTYRAG	3 cut(s)	991, 2234, 2336
SpeI	ACTAGT	1 cut(s)	16
SsiI	CCGC	5 cut(s)	316, 612, 1669, 1748, 1753
SspMI	CTAG	8 cut(s)	17, 210, 953, 1431, 1565, 1605, 2414, 2513
StyD4I	CCNGG	4 cut(s)	546, 879, 1488, 2162
StyI	CCWWGG	4 cut(s)	139, 828, 1342, 1352
TaaI	ACNGT	4 cut(s)	376, 506, 1087, 2432
TaqI	TCGA	9 cut(s)	122, 253, 417, 542, 723, 992, 999, 1655, 2201
TatI	WGTACW	3 cut(s)	181, 394, 1982
TfiI	GAWTC	4 cut(s)	1070, 1103, 2203, 2314
Tru1I	TTAA	8 cut(s)	84, 522, 641, 684, 1590, 1992, 2235, 2517
Tru9I	TTAA	8 cut(s)	84, 522, 641, 684, 1590, 1992, 2235, 2517
TscAI	CASTG	8 cut(s)	171, 388, 741, 823, 1096, 2050, 2437, 2470
TseFI	GTSAC	5 cut(s)	130, 379, 781, 1019, 1664
TseI	GCWGC	9 cut(s)	1305, 1357, 1434, 1755, 1823, 1856, 2035, 2038, 2486
Tsp45I	GTSAC	5 cut(s)	130, 379, 781, 1019, 1664
TspDTI	ATGAA	7 cut(s)	26, 567, 707, 958, 1206, 1462, 1743
TspGWI	ACGGA	1 cut(s)	166
TspRI	CASTG	8 cut(s)	171, 388, 741, 823, 1096, 2050, 2437, 2470
Van91I	CCANNNNNTGG	1 cut(s)	2194
Vha464I	CTTAAG	1 cut(s)	2234
VpaK11BI	GGWCC	7 cut(s)	313, 653, 1097, 1346, 1745, 1955, 2185
XagI	CCTNNNNNAGG	1 cut(s)	1341
XapI	RAATTY	6 cut(s)	196, 255, 288, 1505, 1628, 1809
XbaI	TCTAGA	1 cut(s)	1604
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1788
XhoI	CTCGAG	1 cut(s)	991
XmiI	GTMKAC	1 cut(s)	723
XspI	CTAG	8 cut(s)	17, 210, 953, 1431, 1565, 1605, 2414, 2513
ZrmI	AGTACT	1 cut(s)	1984

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.