Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0023551.1

Orthogroup ID

OG0004410

Physical Location & Seq

Genomic Coordinates Reverse (-)

1805 .. 4339

Gene Structure 2535 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0023551.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2535 bp

atggtgaagacgaaactagtcagttgggtacctttggttctggctgttgttgtgtttatgagtcatggagcctgtggtttattcaatcctgttgataactacttgattgcttgtggttcttcgaaaaatgtcacatttcaaggccgaacctatgttcctgatacactgcaaccttcccttgtactgaaaagtgcaaattctgcagttgctagctccagttccaatgccccttctcctatttaccaatctgctcgaattttcaaggaaacatcttcctataaattcaaaatccagcaagaaggccggcattgggtccggctttatttctaccctttagcaaattcgggccaaaatttgacgtctgctccgataactgtggtcaccgatagctttgtactcttgaacaacttcacttttgagaactatactagttcttatctgttcaaggagtatgcaatcaatgtaacttcagatagtttgaccctcaccatcattccttcaaacagttcagttgcttttgttaatgcaattgaagttgtctcgatcccggatgagctaatccctgatcaggcatatgctataaatccatctgctccttttagtgggctttctgcacttgcccttcaaacaatgtaccgattaaacatggggggtcctttgctcactgctgagaatgatacccttaaaagaacttgggagaatgatttgaaataccttcatgtcgacagctctgcagtgaatgtatcaatcaaccctgccagcataaagtatccggtcactgtcacaccagaaatagcaccaaattgggtctatgccactgctgaagctatgggagatgcgaatgtgccaaatggaaacttcaacataacttgggtctttccagcagatccaaattatttgtatcttgttcgggtacatttctgtgatattgtcagcaaggcactgaataacctagttttcaatcttttcatcaattccgataatgtgctcgcgagtcttgacctctcttccattactggtgacttgaatgtgccatattacaaagactttgtttccaactcctcagcagattcaaatactttgacagtcagtgtaggtccagatacaatggctgatgtcactaatgcaattctgaatggcctggagattttgaagatcagcaatgacttggggagcttggacgggtctttgtctgttcagagtctccttcccagttcaccctcgaagagcaataagatactaatcttagttgtgtgtgttgtaggagctgtagctcttgtggcaataattgctctcttttattgctgcctggcagctcgccagtcgaagactactcctaaccaagggcatccatggctgcttctgcccttgtatggaagctctcagacaatgaccaaaatgtccacaacttcacagaagagtgcaacagctagctgcatttcattagcttcctccaatcttggccgcttattcatgttccaagaaatcctagatgcaaccaacaagtttgatgagagcctacttctaggggttggcggctttggcagagtttacaagggaacactagaagatgggacaaaagtagctgttaaaagaggaaaccccagatccgaacaaggtcttgctgaattccgaactgagattgaaatgttgtctaagcttcgtcatcgccaccttgtgtctcttattggttactgtgatgaaaggtcagagatgattcttgtgtatgaatacatggctaatggaccgctccggagccatttgtatggaacagatttgcctaccctatcatggaagcttcgccttgaaatttgcatcggggctgcaagagggctccattatcttcacactggtgcagctcaaagcataattcaccgagacgtgaagacaacaaacattcttttggatgagaactttgttgccaaagttgcagattttggcctctcaaaagcaggtccagctatagatcagactcatgtcagtacagctgttaagggtagttttggttaccttgatcctgaatactttaggaggcagcagctcactgagaaatcagatgtgtattcgtttggtgtagttctaatggaagttctttgcacaagaccagctttgaatccggttcttcccagagagcaagtgaacatagcagaatgggcaatgacctggcaaaagaagggcatgctggaccaaatcatggacccgaatctggctgggaaggtaaatccagcttctcttaagaagtttggtgagacagctgagaagtgccttgccgagtatggtgttgataggccatcaatgggagatgtcttgtggaatcttgaatatgctcttcagcttgaggagacttcatctgcgctcatggaacctgaagataacagcacgaaccacatacgagatattgaattgacaccacttgagccatttgacaacagtgtgagtatgatcgagggagggcactccggcacagatgacgatgctgaagatgctgccacaagtgctgtgttctctcagctagtcaatcctcgtggaagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

844

Amino Acids

92.31

Weight (kDa)

5.29

Isoelectric Point (pI)

40.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54380
fragaria_vesca	FvH4_2g16820 FvH4_2g16820 FvH4_3g20780 FvH4_3g20780 FvH4_3g20780
malus_domestica	MD03G1221300.v1.1 MD11G1238700.v1.1
prunus_persica	Prupe.4G188000_v2.0.a1
pyrus_communis	pycom03g17020 pycom11g21030
rosa_chinensis	RchiOBHm_Chr5g0035071 RchiOBHm_Chr6g0280941
rosa_laevigata	RLG00000013014 RLG00000033592
rosa_multiflora	Rmu_sc0005362.1_g000028 Rmu_sc0023551.1_g000001 Rmu_sc0023552.1_g000001
rosa_roxburghii	Rroxscaffold_1G00045340 Rroxscaffold_7G00187470
rosa_rugosa	Rorug05G0149600 Rorug06G0137100
rosa_samantha	Rh5AG242600 Rh5BG242200 Rh5CG273700 Rh5DG250800 Rh6AG249400 Rh6BG251500 Rh6CG252100 Rh6DG243900
rosa_wichuraiana	Rw5G022160 Rw6G021580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1399
AatII	GACGTC	1 cut(s)	362
Acc36I	ACCTGC	1 cut(s)	1943
Acc65I	GGTACC	1 cut(s)	28
AccB1I	GGYRCC	1 cut(s)	28
AccB7I	CCANNNNNTGG	1 cut(s)	2194
AccBSI	CCGCTC	1 cut(s)	1750
AccI	GTMKAC	1 cut(s)	723
AccII	CGCG	1 cut(s)	992
AccIII	TCCGGA	1 cut(s)	1752
AciI	CCGC	3 cut(s)	1465, 1536, 1748
AclWI	GGATC	4 cut(s)	538, 881, 1602, 2009
AcoI	YGGCCR	1 cut(s)	1462
AcsI	RAATTY	7 cut(s)	196, 255, 281, 340, 352, 1628, 1809
AcuI	CTGAAG	5 cut(s)	453, 843, 2315, 2388, 2499
AcyI	GRCGYC	1 cut(s)	359
AdeI	CACNNNGTG	1 cut(s)	1678
AfaI	GTAC	6 cut(s)	30, 183, 396, 635, 915, 1984
AfiI	CCNNNNNNNGG	9 cut(s)	310, 568, 602, 1343, 1373, 1791, 2194, 2206, 2297
AflII	CTTAAG	1 cut(s)	2234
AhlI	ACTAGT	2 cut(s)	16, 428
AjiI	CACGTC	1 cut(s)	1882
AjnI	CCWGG	3 cut(s)	1140, 1308, 2162
AleI	CACNNNNGTG	1 cut(s)	1851
AloI	GAACNNNNNNTCC	2 cut(s)	139, 171
Alw21I	GWGCWC	1 cut(s)	990
Alw26I	GTCTC	6 cut(s)	544, 1208, 1686, 1872, 2243, 2336
AlwI	GGATC	4 cut(s)	538, 881, 1602, 2009
Aor13HI	TCCGGA	1 cut(s)	1752
AoxI	GGCC	7 cut(s)	142, 301, 346, 1138, 1462, 1939, 2288
ApeKI	GCWGC	9 cut(s)	1305, 1313, 1357, 1434, 1823, 1856, 2035, 2038, 2486
ApoI	RAATTY	7 cut(s)	196, 255, 281, 340, 352, 1628, 1809
Asp700I	GAANNNNTTC	1 cut(s)	407
Asp718I	GGTACC	1 cut(s)	28
AspLEI	GCGC	1 cut(s)	2356
AspS9I	GGNCC	8 cut(s)	313, 346, 653, 1097, 1745, 1955, 2185, 2197
AsuC2I	CCSGG	1 cut(s)	548
AsuHPI	GGTGA	7 cut(s)	16, 373, 478, 1031, 1209, 1865, 2258
AsuII	TTCGAA	1 cut(s)	122
AsuNHI	GCTAGC	2 cut(s)	209, 1430
AvaII	GGWCC	7 cut(s)	313, 653, 1097, 1745, 1955, 2185, 2197
BaeGI	GKGCMC	1 cut(s)	2457
BanI	GGYRCC	1 cut(s)	28
BanII	GRGCYC	1 cut(s)	1836
BauI	CACGAG	1 cut(s)	2523
BbsI	GAAGAC	3 cut(s)	14, 1334, 1892
Bbv12I	GWGCWC	1 cut(s)	990
BbvCI	CCTCAGC	1 cut(s)	1063
BbvI	GCAGC	9 cut(s)	1292, 1325, 1344, 1421, 1810, 1868, 2047, 2050, 2473
BccI	CCATC	4 cut(s)	497, 595, 1565, 2299
BcgI	CGANNNNNNTGC	2 cut(s)	713, 747
BciT130I	CCWGG	3 cut(s)	1142, 1310, 2164
BciVI	GTATCC	1 cut(s)	780
BclI	TGATCA	1 cut(s)	565
BcnI	CCSGG	1 cut(s)	548
BcoDI	GTCTC	6 cut(s)	544, 1208, 1686, 1872, 2243, 2336
BcuI	ACTAGT	2 cut(s)	16, 428
BfaI	CTAG	9 cut(s)	17, 210, 429, 953, 1431, 1490, 1526, 1565, 2513
BfmI	CTRYAG	4 cut(s)	201, 732, 1269, 1962
BfrI	CTTAAG	1 cut(s)	2234
BfuAI	ACCTGC	1 cut(s)	1943
BfuI	GTATCC	1 cut(s)	780
Bme1390I	CCNGG	4 cut(s)	548, 1142, 1310, 2164
Bme18I	GGWCC	7 cut(s)	313, 653, 1097, 1745, 1955, 2185, 2197
BmgBI	CACGTC	1 cut(s)	1882
BmgT120I	GGNCC	8 cut(s)	313, 346, 653, 1097, 1745, 1955, 2185, 2197
BmiI	GGNNCC	8 cut(s)	30, 70, 314, 654, 1757, 1835, 2199, 2364
BmrFI	CCNGG	4 cut(s)	548, 1142, 1310, 2164
BmrI	ACTGGG	1 cut(s)	1206
BmsI	GCATC	6 cut(s)	826, 1357, 1483, 1824, 2464, 2473
BmtI	GCTAGC	2 cut(s)	213, 1434
BmuI	ACTGGG	1 cut(s)	1206
BoxI	GACNNNNGTC	1 cut(s)	1976
BpiI	GAAGAC	3 cut(s)	14, 1334, 1892
BpmI	CTGGAG	2 cut(s)	199, 1163
Bpu10I	CCTNAGC	1 cut(s)	1063
Bpu14I	TTCGAA	1 cut(s)	122
BpuEI	CTTGAG	2 cut(s)	2357, 2435
BpuMI	CCSGG	1 cut(s)	548
BsaBI	GATNNNNATC	1 cut(s)	1241
BsaHI	GRCGYC	1 cut(s)	359
BsaJI	CCNNGG	2 cut(s)	1342, 1352
BsaWI	WCCGGW	3 cut(s)	772, 1752, 2116
BsaXI	ACNNNNNCTCC	2 cut(s)	349, 379
Bsc4I	CCNNNNNNNGG	9 cut(s)	310, 568, 602, 1343, 1373, 1791, 2194, 2206, 2297
Bse118I	RCCGGY	1 cut(s)	303
Bse1I	ACTGG	5 cut(s)	216, 1021, 1212, 1321, 1855
Bse3DI	GCAATG	2 cut(s)	1168, 2163
Bse8I	GATNNNNATC	1 cut(s)	1241
BseAI	TCCGGA	1 cut(s)	1752
BseBI	CCWGG	3 cut(s)	1142, 1310, 2164
BseDI	CCNNGG	2 cut(s)	1342, 1352
BseGI	GGATG	3 cut(s)	556, 1348, 1912
BseJI	GATNNNNATC	1 cut(s)	1241
BseLI	CCNNNNNNNGG	9 cut(s)	310, 568, 602, 1343, 1373, 1791, 2194, 2206, 2297
BseMI	GCAATG	2 cut(s)	1168, 2163
BseMII	CTCAG	7 cut(s)	660, 1077, 1397, 1629, 2037, 2247, 2522
BseNI	ACTGG	5 cut(s)	216, 1021, 1212, 1321, 1855
BseRI	GAGGAG	2 cut(s)	1051, 2354
BseSI	GKGCMC	1 cut(s)	2457
BseXI	GCAGC	9 cut(s)	1292, 1325, 1344, 1421, 1810, 1868, 2047, 2050, 2473
BseYI	CCCAGC	1 cut(s)	2210
BsgI	GTGCAG	2 cut(s)	597, 1875
Bsh1236I	CGCG	1 cut(s)	992
BshFI	GGCC	7 cut(s)	144, 303, 348, 1140, 1464, 1941, 2290
BshNI	GGYRCC	1 cut(s)	28
BsiHKAI	GWGCWC	1 cut(s)	990
BsiSI	CCGG	7 cut(s)	304, 316, 548, 773, 1753, 2117, 2460
BslFI	GGGAC	1 cut(s)	1588
BslI	CCNNNNNNNGG	9 cut(s)	310, 568, 602, 1343, 1373, 1791, 2194, 2206, 2297
BsmAI	GTCTC	6 cut(s)	544, 1208, 1686, 1872, 2243, 2336
BsmBI	CGTCTC	1 cut(s)	1872
BsmFI	GGGAC	1 cut(s)	1588
BsnI	GGCC	7 cut(s)	144, 303, 348, 1140, 1464, 1941, 2290
Bsp119I	TTCGAA	1 cut(s)	122
Bsp1286I	GDGCHC	3 cut(s)	990, 1836, 2457
Bsp13I	TCCGGA	1 cut(s)	1752
Bsp143I	GATC	8 cut(s)	543, 565, 886, 1155, 1607, 1966, 2014, 2442
Bsp19I	CCATGG	1 cut(s)	1352
Bsp68I	TCGCGA	1 cut(s)	992
BspACI	CCGC	3 cut(s)	1465, 1536, 1748
BspANI	GGCC	7 cut(s)	144, 303, 348, 1140, 1464, 1941, 2290
BspCNI	CTCAG	7 cut(s)	661, 1076, 1396, 1630, 2038, 2248, 2521
BspEI	TCCGGA	1 cut(s)	1752
BspFNI	CGCG	1 cut(s)	992
BspLI	GGNNCC	8 cut(s)	30, 70, 314, 654, 1757, 1835, 2199, 2364
BspMAI	CTGCAG	2 cut(s)	205, 736
BspMI	ACCTGC	1 cut(s)	1943
BspOI	GCTAGC	2 cut(s)	213, 1434
BspPI	GGATC	4 cut(s)	538, 881, 1602, 2009
BspQI	GCTCTTC	2 cut(s)	1220, 2334
BspT104I	TTCGAA	1 cut(s)	122
BspT107I	GGYRCC	1 cut(s)	28
BspTI	CTTAAG	1 cut(s)	2234
BsrBI	CCGCTC	1 cut(s)	1750
BsrDI	GCAATG	2 cut(s)	1168, 2163
BsrFI	RCCGGY	1 cut(s)	303
BsrI	ACTGG	5 cut(s)	216, 1021, 1212, 1321, 1855
BssAI	RCCGGY	1 cut(s)	303
BssECI	CCNNGG	2 cut(s)	1342, 1352
BssMI	GATC	8 cut(s)	543, 565, 886, 1155, 1607, 1966, 2014, 2442
BssNI	GRCGYC	1 cut(s)	359
BssSI	CACGAG	1 cut(s)	2523
BssT1I	CCWWGG	2 cut(s)	1342, 1352
Bst2BI	CACGAG	1 cut(s)	2523
Bst2UI	CCWGG	3 cut(s)	1142, 1310, 2164
Bst4CI	ACNGT	6 cut(s)	376, 506, 781, 1087, 1697, 2432
Bst6I	CTCTTC	4 cut(s)	1012, 1220, 1412, 2334
BstACI	GRCGYC	1 cut(s)	359
BstAFI	CTTAAG	1 cut(s)	2234
BstAPI	GCANNNNNTGC	2 cut(s)	200, 1289
BstBI	TTCGAA	1 cut(s)	122
BstC8I	GCNNGC	7 cut(s)	211, 305, 760, 990, 1318, 1432, 2180
BstDEI	CTNAG	9 cut(s)	669, 1063, 1246, 1383, 1638, 1656, 2046, 2256, 2508
BstDSI	CCRYGG	1 cut(s)	1352
BstEII	GGTNACC	2 cut(s)	379, 2006
BstENI	CCTNNNNNAGG	1 cut(s)	1341
BstF5I	GGATG	3 cut(s)	556, 1348, 1912
BstFNI	CGCG	1 cut(s)	992
BstHHI	GCGC	1 cut(s)	2356
BstKTI	GATC	8 cut(s)	546, 568, 889, 1158, 1610, 1969, 2017, 2445
BstMAI	GTCTC	6 cut(s)	544, 1208, 1686, 1872, 2243, 2336
BstMBI	GATC	8 cut(s)	543, 565, 886, 1155, 1607, 1966, 2014, 2442
BstNI	CCWGG	3 cut(s)	1142, 1310, 2164
BstNSI	RCATGY	1 cut(s)	2182
BstPAI	GACNNNNGTC	1 cut(s)	1976
BstPI	GGTNACC	2 cut(s)	379, 2006
BstSCI	CCNGG	4 cut(s)	546, 1140, 1308, 2162
BstSFI	CTRYAG	4 cut(s)	201, 732, 1269, 1962
BstSLI	GKGCMC	1 cut(s)	2457
BstUI	CGCG	1 cut(s)	992
BstV1I	GCAGC	9 cut(s)	1292, 1325, 1344, 1421, 1810, 1868, 2047, 2050, 2473
BstV2I	GAAGAC	3 cut(s)	14, 1334, 1892
BstX2I	RGATCY	2 cut(s)	886, 1607
BstXI	CCANNNNNNTGG	1 cut(s)	1766
BstYI	RGATCY	2 cut(s)	886, 1607
BsuI	GTATCC	1 cut(s)	780
BsuRI	GGCC	7 cut(s)	144, 303, 348, 1140, 1464, 1941, 2290
BtgI	CCRYGG	1 cut(s)	1352
BtgZI	GCGATG	1 cut(s)	1652
BtrI	CACGTC	1 cut(s)	1882
BtsCI	GGATG	3 cut(s)	556, 1348, 1912
BtsI	GCAGTG	4 cut(s)	164, 663, 741, 816
BtuMI	TCGCGA	1 cut(s)	992
BveI	ACCTGC	1 cut(s)	1943
Cac8I	GCNNGC	7 cut(s)	211, 305, 760, 990, 1318, 1432, 2180
CfoI	GCGC	1 cut(s)	2356
Cfr10I	RCCGGY	1 cut(s)	303
Cfr13I	GGNCC	8 cut(s)	313, 346, 653, 1097, 1745, 1955, 2185, 2197
Csp6I	GTAC	6 cut(s)	29, 182, 395, 634, 914, 1983
CspCI	CAANNNNNGTGG	1 cut(s)	2506
CviQI	GTAC	6 cut(s)	29, 182, 395, 634, 914, 1983
DdeI	CTNAG	9 cut(s)	669, 1063, 1246, 1383, 1638, 1656, 2046, 2256, 2508
DpnI	GATC	8 cut(s)	545, 567, 888, 1157, 1609, 1968, 2016, 2444
DpnII	GATC	8 cut(s)	543, 565, 886, 1155, 1607, 1966, 2014, 2442
DraIII	CACNNNGTG	1 cut(s)	1678
DrdI	GACNNNNNNGTC	1 cut(s)	1399
DseDI	GACNNNNNNGTC	1 cut(s)	1399
EaeI	YGGCCR	1 cut(s)	1462
Eam1104I	CTCTTC	4 cut(s)	1012, 1220, 1412, 2334
EarI	CTCTTC	4 cut(s)	1012, 1220, 1412, 2334
Eco130I	CCWWGG	2 cut(s)	1342, 1352
Eco24I	GRGCYC	1 cut(s)	1836
Eco47I	GGWCC	7 cut(s)	313, 653, 1097, 1745, 1955, 2185, 2197
Eco57I	CTGAAG	5 cut(s)	453, 843, 2315, 2388, 2499
Eco91I	GGTNACC	2 cut(s)	379, 2006
EcoNI	CCTNNNNNAGG	1 cut(s)	1341
EcoO109I	RGGNCCY	1 cut(s)	653
EcoO65I	GGTNACC	2 cut(s)	379, 2006
EcoRI	GAATTC	1 cut(s)	1628
EcoRII	CCWGG	3 cut(s)	1140, 1308, 2162
EcoT14I	CCWWGG	2 cut(s)	1342, 1352
EcoT38I	GRGCYC	1 cut(s)	1836
ErhI	CCWWGG	2 cut(s)	1342, 1352
Esp3I	CGTCTC	1 cut(s)	1872
FalI	AAGNNNNNCTT	2 cut(s)	2092, 2124
FaqI	GGGAC	1 cut(s)	1588
FauNDI	CATATG	1 cut(s)	574
FbaI	TGATCA	1 cut(s)	565
FblI	GTMKAC	1 cut(s)	723
FokI	GGATG	3 cut(s)	563, 1335, 1919
FriOI	GRGCYC	1 cut(s)	1836
FspBI	CTAG	9 cut(s)	17, 210, 429, 953, 1431, 1490, 1526, 1565, 2513
GlaI	GCGC	1 cut(s)	2355
GsaI	CCCAGC	1 cut(s)	2214
GsuI	CTGGAG	2 cut(s)	199, 1163
HaeIII	GGCC	7 cut(s)	144, 303, 348, 1140, 1464, 1941, 2290
HapII	CCGG	7 cut(s)	304, 316, 548, 773, 1753, 2117, 2460
HhaI	GCGC	1 cut(s)	2356
Hin1I	GRCGYC	1 cut(s)	359
Hin6I	GCGC	1 cut(s)	2354
HinP1I	GCGC	1 cut(s)	2354
HincII	GTYRAC	1 cut(s)	724
HindII	GTYRAC	1 cut(s)	724
HindIII	AAGCTT	2 cut(s)	1658, 1796
HinfI	GANTC	9 cut(s)	61, 994, 1070, 1201, 1717, 1972, 2113, 2203, 2314
HpaII	CCGG	7 cut(s)	304, 316, 548, 773, 1753, 2117, 2460
HphI	GGTGA	7 cut(s)	16, 373, 478, 1031, 1209, 1865, 2258
Hpy166II	GTNNAC	5 cut(s)	724, 1217, 1404, 1552, 2140
Hpy188III	TCNNGA	9 cut(s)	158, 400, 541, 991, 998, 1100, 1753, 2018, 2318
Hpy8I	GTNNAC	5 cut(s)	724, 1217, 1404, 1552, 2140
HpyAV	CCTTC	9 cut(s)	183, 240, 293, 507, 632, 725, 1217, 2167, 2209
HpyCH4III	ACNGT	6 cut(s)	376, 506, 781, 1087, 1697, 2432
HpyCH4IV	ACGT	2 cut(s)	359, 1881
HpyF3I	CTNAG	9 cut(s)	669, 1063, 1246, 1383, 1638, 1656, 2046, 2256, 2508
HpySE526I	ACGT	2 cut(s)	359, 1881
Hsp92I	GRCGYC	1 cut(s)	359
HspAI	GCGC	1 cut(s)	2354
Kpn2I	TCCGGA	1 cut(s)	1752
KpnI	GGTACC	1 cut(s)	32
KroI	GCCGGC	1 cut(s)	303
KroNI	GCCGGC	1 cut(s)	305
Ksp22I	TGATCA	1 cut(s)	565
Kzo9I	GATC	8 cut(s)	543, 565, 886, 1155, 1607, 1966, 2014, 2442
LguI	GCTCTTC	2 cut(s)	1220, 2334
LmnI	GCTCC	9 cut(s)	68, 218, 370, 598, 1173, 1265, 1755, 1755, 1839
Lsp1109I	GCAGC	9 cut(s)	1292, 1325, 1344, 1421, 1810, 1868, 2047, 2050, 2473
LweI	GCATC	6 cut(s)	826, 1357, 1483, 1824, 2464, 2473
MaeI	CTAG	9 cut(s)	17, 210, 429, 953, 1431, 1490, 1526, 1565, 2513
MaeII	ACGT	2 cut(s)	359, 1881
MaeIII	GTNAC	9 cut(s)	130, 379, 463, 775, 781, 1019, 1117, 1691, 2006
MalI	GATC	8 cut(s)	545, 567, 888, 1157, 1609, 1968, 2016, 2444
MbiI	CCGCTC	1 cut(s)	1750
MboI	GATC	8 cut(s)	543, 565, 886, 1155, 1607, 1966, 2014, 2442
MfeI	CAATTG	1 cut(s)	528
MflI	RGATCY	2 cut(s)	886, 1607
MhlI	GDGCHC	3 cut(s)	990, 1836, 2457
MlyI	GAGTC	4 cut(s)	70, 1003, 1210, 1966
MmeI	TCCRAC	1 cut(s)	1080
MroI	TCCGGA	1 cut(s)	1752
MroNI	GCCGGC	1 cut(s)	303
MroXI	GAANNNNTTC	1 cut(s)	407
MseI	TTAA	6 cut(s)	522, 641, 684, 1590, 1992, 2235
MslI	CAYNNNNRTG	3 cut(s)	921, 1764, 1851
MspA1I	CMGCKG	2 cut(s)	1988, 2255
MspCI	CTTAAG	1 cut(s)	2234
MspI	CCGG	7 cut(s)	304, 316, 548, 773, 1753, 2117, 2460
MspR9I	CCNGG	4 cut(s)	548, 1142, 1310, 2164
MunI	CAATTG	1 cut(s)	528
MvaI	CCWGG	3 cut(s)	1142, 1310, 2164
MvnI	CGCG	1 cut(s)	992
NaeI	GCCGGC	1 cut(s)	305
NciI	CCSGG	1 cut(s)	548
NcoI	CCATGG	1 cut(s)	1352
NdeI	CATATG	1 cut(s)	574
NdeII	GATC	8 cut(s)	543, 565, 886, 1155, 1607, 1966, 2014, 2442
NgoMIV	GCCGGC	1 cut(s)	303
NheI	GCTAGC	2 cut(s)	209, 1430
NlaIV	GGNNCC	8 cut(s)	30, 70, 314, 654, 1757, 1835, 2199, 2364
NmeAIII	GCCGAG	1 cut(s)	2296
NmuCI	GTSAC	6 cut(s)	130, 379, 775, 781, 1019, 1117
NruI	TCGCGA	1 cut(s)	992
NspI	RCATGY	1 cut(s)	2182
NspV	TTCGAA	1 cut(s)	122
OliI	CACNNNNGTG	1 cut(s)	1851
PaeI	GCATGC	1 cut(s)	2182
PciSI	GCTCTTC	2 cut(s)	1220, 2334
PcsI	WCGNNNNNNNCGW	1 cut(s)	365
PdiI	GCCGGC	1 cut(s)	305
PdmI	GAANNNNTTC	1 cut(s)	407
PfeI	GAWTC	5 cut(s)	1070, 1717, 2113, 2203, 2314
PflMI	CCANNNNNTGG	1 cut(s)	2194
PfoI	TCCNGGA	1 cut(s)	546
PleI	GAGTC	4 cut(s)	69, 1002, 1209, 1966
PpsI	GAGTC	4 cut(s)	69, 1002, 1209, 1966
PpuMI	RGGWCCY	1 cut(s)	653
PshAI	GACNNNNGTC	1 cut(s)	1976
Psp5II	RGGWCCY	1 cut(s)	653
Psp6I	CCWGG	3 cut(s)	1140, 1308, 2162
PspEI	GGTNACC	2 cut(s)	379, 2006
PspFI	CCCAGC	1 cut(s)	2210
PspGI	CCWGG	3 cut(s)	1140, 1308, 2162
PspN4I	GGNNCC	8 cut(s)	30, 70, 314, 654, 1757, 1835, 2199, 2364
PspPI	GGNCC	8 cut(s)	313, 346, 653, 1097, 1745, 1955, 2185, 2197
PspPPI	RGGWCCY	1 cut(s)	653
PsrI	GAACNNNNNNTAC	2 cut(s)	21, 53
PstI	CTGCAG	2 cut(s)	205, 736
PsuI	RGATCY	2 cut(s)	886, 1607
PvuII	CAGCTG	2 cut(s)	1988, 2255
RruI	TCGCGA	1 cut(s)	992
RsaI	GTAC	6 cut(s)	30, 183, 396, 635, 915, 1984
RsaNI	GTAC	6 cut(s)	29, 182, 395, 634, 914, 1983
RseI	CAYNNNNRTG	3 cut(s)	921, 1764, 1851
SalI	GTCGAC	1 cut(s)	722
SapI	GCTCTTC	2 cut(s)	1220, 2334
SaqAI	TTAA	6 cut(s)	522, 641, 684, 1590, 1992, 2235
Sau3AI	GATC	8 cut(s)	543, 565, 886, 1155, 1607, 1966, 2014, 2442
Sau96I	GGNCC	8 cut(s)	313, 346, 653, 1097, 1745, 1955, 2185, 2197
SchI	GAGTC	4 cut(s)	70, 1003, 1210, 1966
ScrFI	CCNGG	4 cut(s)	548, 1142, 1310, 2164
SduI	GDGCHC	3 cut(s)	990, 1836, 2457
SfaNI	GCATC	6 cut(s)	826, 1357, 1483, 1824, 2464, 2473
SfcI	CTRYAG	4 cut(s)	201, 732, 1269, 1962
SfuI	TTCGAA	1 cut(s)	122
SinI	GGWCC	7 cut(s)	313, 653, 1097, 1745, 1955, 2185, 2197
SmiMI	CAYNNNNRTG	3 cut(s)	921, 1764, 1851
SmlI	CTYRAG	3 cut(s)	2234, 2336, 2414
SmoI	CTYRAG	3 cut(s)	2234, 2336, 2414
SpeI	ACTAGT	2 cut(s)	16, 428
SphI	GCATGC	1 cut(s)	2182
SsiI	CCGC	3 cut(s)	1465, 1536, 1748
SspMI	CTAG	9 cut(s)	17, 210, 429, 953, 1431, 1490, 1526, 1565, 2513
StyD4I	CCNGG	4 cut(s)	546, 1140, 1308, 2162
StyI	CCWWGG	2 cut(s)	1342, 1352
TaaI	ACNGT	6 cut(s)	376, 506, 781, 1087, 1697, 2432
TaiI	ACGT	2 cut(s)	362, 1884
TaqI	TCGA	7 cut(s)	122, 253, 542, 723, 1223, 1325, 2445
TatI	WGTACW	3 cut(s)	181, 394, 1982
TauI	GCSGC	2 cut(s)	1467, 1539
TfiI	GAWTC	5 cut(s)	1070, 1717, 2113, 2203, 2314
Tru1I	TTAA	6 cut(s)	522, 641, 684, 1590, 1992, 2235
Tru9I	TTAA	6 cut(s)	522, 641, 684, 1590, 1992, 2235
TseFI	GTSAC	6 cut(s)	130, 379, 775, 781, 1019, 1117
TseI	GCWGC	9 cut(s)	1305, 1313, 1357, 1434, 1823, 1856, 2035, 2038, 2486
Tsp45I	GTSAC	6 cut(s)	130, 379, 775, 781, 1019, 1117
TspDTI	ATGAA	7 cut(s)	707, 958, 1431, 1462, 1716, 1743, 2337
Van91I	CCANNNNNTGG	1 cut(s)	2194
Vha464I	CTTAAG	1 cut(s)	2234
VpaK11BI	GGWCC	7 cut(s)	313, 653, 1097, 1745, 1955, 2185, 2197
XagI	CCTNNNNNAGG	1 cut(s)	1341
XapI	RAATTY	7 cut(s)	196, 255, 281, 340, 352, 1628, 1809
XceI	RCATGY	1 cut(s)	2182
XmiI	GTMKAC	1 cut(s)	723
XmnI	GAANNNNTTC	1 cut(s)	407
XspI	CTAG	9 cut(s)	17, 210, 429, 953, 1431, 1490, 1526, 1565, 2513
ZraI	GACGTC	1 cut(s)	360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.