Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0004410

Physical Location & Seq

Genomic Coordinates Reverse (-)

24125340 .. 24127872

Gene Structure 2533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g21030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGGTGAGGATGAAACTAGTAAATTGGGTAGCTTTGATTCTTGCTGTTGTTGTGTTCCTGAGTTATAGGTCATCTGCTTCATTCACGGCTGTCGATAATTACCTAATTGTCTGCGGTTCTTCGAAAAATGTCACATTCCAAGGTCGAACCTTTGTTCCTGATACACAACAATCTTCCCTTGTACTAAAAAGTGCAAATTCCTTAGTTGCTAGTCCCAATGCTAATGCCCCTTCTCCACTTTACCAATCTGCTCGAGTTTTCAAGGCAGCAGCTTCTTACAAATTCAAAATCCAGCAAGAAGGCCGGCATTGGGTCCGCCTTTATTTTTTCCCTCTTACAAGCCCTGGCCAAAACTTGGAGTCTGCTCAAATAACTGTAGTTACTGATAATTTTGTACTCTTGAACAACTTCACCTTCAAGAACTATAATGGTTCTTATCTGTTCAAGGAGTATGCAATTAATGTAACTTCGGATACCTTGACTCTTAACTTCATTCCTTCAAACAATTCAGTTGCTTTTGTTAATGCAATTGAAGTAGTTTCTATCCCGGATGCACTGCTCCCTGACCAGGCATATGCTGTGCATCCATCTGCTCCTTTTAGTGGACTTTCTGAGCTTGCCCTTCAAACAGTTTACAGGTTAAACATGGGGGGTCCTTTGCTCACATCTCAAAATGATACCCTTGGAAGAACTTGGGAGAATGACATGAAGTACCTCCATGTGGACAGTTCTGCAGTGAATGTATCGGTGAACCCTGCAAACATAAAATATCCACAGGCCGTCACACCCGAAATTGCCCCAAACTGGGTCTATGCCACTGCTGAAGCCATGGGAAATGCAAACGTGCCCAATGTGAACTTCAACATAACTTGGGTCTTTACAGTCGATCCAAATTTCATGTATCTTGTTCGGGTACATTTCTGTGATATTGTCAGCAAAGCTCTGAATAGTCTCGTTTTCAATGTTTTCATAAATTCTGACAATGTGCTTGGGAGTCTCGACCTCTCTTCCATTACTGGTGACTTGGGTGTGCCTTATTACAAGGACTTTGTTTCCAACTCCACAGAAGGTGCGGATACTTTGACTGTCAGTGTTGGTCCAGATTCAATGGCTGATATCACCAATGCAATTCTGAATGGGTTGGAGATTATGAAGATCAGCAATGAGTTGGGGAGTTTGGACGGGTCTCTATCCGTGGGGAATTTTCTTCCTAGTTCATCCTCAAAGAAGAATAATATAGGAATCATAGTTGGCTCTGTTGTGGGATCTGTTGCTGTTGTGGCAATTATTGGTTTCCTTTATTGCTGCTTGGCATCCCACAAGTCGAAGACAACTAACCAAGCGACATGGCTGCCCTTGCCCTTGTATGGAAATTCTCAGACCATGACAAAAATGTCGACAACTTCACAAAAAAGTGGAACAGCTAGCTGCATTTCATTAGCTTCCTCCAATCTTGGCAAATTCTTCATGTTCCAGGAAATCCTGGATGCAACCAACAAGTTTGATGAGAGCCTACTTCTTGGCGTCGGTGGTTTTGGCAGGGTTTACAAGGGAACACTTGAAGATGGGACTAAAGTAGCTGTCAAAAGGGGAAATCCCAGATCCGAACAAGGTCTGGCTGAATTCCGAACTGAGATTGAAATGTTATCCAAGCTTCGCCACCGCCACCTTGTGTCTCTTATTGGCTACTGTGATGAAAGATCAGAAATGATTCTTGTCTATGAGTACATGGCCAACGGACCCCTCAGGAGCCATTTGTATGGAACAGACCTGCCAACGCTCTCGTGGAAGCTACGCCTTGAAATTTGCATTGGGGCTGCAAGAGGGCTCCATTATCTCCACACTGGTGCAGCTCAAAGCATAATTCACCGAGATGTGAAGACAACCAACATTCTCTTGGATGAGAACTTTGTAGCCAAAGTTGCTGATTTTGGCCTCTCAAAAGCAGGACCAGCTCTTGATCAGACCCATGTGAGTACAGCTGTTAAGGTTCTAATGGAAGTTCTGTGCACAAGACCTGCTTTAAATCCTGTTCTTCCAAGGGAACAGGTCAACATAGCAGAATGGGCAATGACATGGCAGAAGAAGGGCATGCTAGACCAAATCATGGACCCAAATCTGGTGGGGAAGGTAAATCCAGCTTCTCTTAAGAAGTTCGGGGAGACAGCTGAGAAGTGCCTCGCGGAGTATGGTGTTGACAGGCCATCAATGGGAGATGTCTTGTGGAATCTTGAATATGCTTTTCAGCTCGAGGAGACATCATCTGCACTCATGGAACCCGACGATAACAGCACAAACCACATACCAGGTATCCAATTAACCCAAGGAGAGCCATTTGATAACAGTGTGAGCATGATCGATGGGGGACACTCCGGCACAGATGATGACGCAGAAGATGCTGCCACAAGTGCTGTGTTTTCTCAGCTTGTTAATCCTCGCGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

816

Amino Acids

88.88

Weight (kDa)

5.55

Isoelectric Point (pI)

31.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	38 - 386	1.5e-30	Malectin-like domain
Pkinase	PF00069	506 - 650	3.3e-29	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	507 - 659	1.5e-33	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54380
fragaria_vesca	FvH4_2g16820 FvH4_2g16820 FvH4_3g20780 FvH4_3g20780 FvH4_3g20780
malus_domestica	MD03G1221300.v1.1 MD11G1238700.v1.1
prunus_persica	Prupe.4G188000_v2.0.a1
pyrus_communis	pycom03g17020 pycom11g21030
rosa_chinensis	RchiOBHm_Chr5g0035071 RchiOBHm_Chr6g0280941
rosa_laevigata	RLG00000013014 RLG00000033592
rosa_multiflora	Rmu_sc0005362.1_g000028 Rmu_sc0023551.1_g000001 Rmu_sc0023552.1_g000001
rosa_roxburghii	Rroxscaffold_1G00045340 Rroxscaffold_7G00187470
rosa_rugosa	Rorug05G0149600 Rorug06G0137100
rosa_samantha	Rh5AG242600 Rh5BG242200 Rh5CG273700 Rh5DG250800 Rh6AG249400 Rh6BG251500 Rh6CG252100 Rh6DG243900
rosa_wichuraiana	Rw5G022160 Rw6G021580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1393
Acc36I	ACCTGC	2 cut(s)	1779, 2026
AccB7I	CCANNNNNTGG	2 cut(s)	355, 2107
AccI	GTMKAC	1 cut(s)	1397
AccII	CGCG	2 cut(s)	2183, 2439
AciI	CCGC	6 cut(s)	114, 316, 1073, 1663, 2183, 2439
AclWI	GGATC	3 cut(s)	881, 1273, 1596
AcoI	YGGCCR	2 cut(s)	346, 1731
AcsI	RAATTY	9 cut(s)	196, 281, 892, 973, 1201, 1372, 1460, 1622, 1803
AcuI	CTGAAG	1 cut(s)	843
AcyI	GRCGYC	1 cut(s)	1524
AdeI	CACNNNGTG	1 cut(s)	1672
AfaI	GTAC	6 cut(s)	183, 396, 713, 915, 1727, 1978
AflII	CTTAAG	1 cut(s)	2147
AhlI	ACTAGT	1 cut(s)	16
AjnI	CCWGG	5 cut(s)	343, 567, 1473, 1482, 2305
AjuI	GAANNNNNNNTTGG	4 cut(s)	842, 874, 1794, 1826
AleI	CACNNNNGTG	1 cut(s)	1845
AloI	GAACNNNNNNTCC	2 cut(s)	139, 171
Alw21I	GWGCWC	1 cut(s)	2012
Alw26I	GTCTC	6 cut(s)	956, 1001, 1191, 1680, 2156, 2249
Alw44I	GTGCAC	1 cut(s)	2008
AlwI	GGATC	3 cut(s)	881, 1273, 1596
Ama87I	CYCGRG	2 cut(s)	252, 2249
AoxI	GGCC	6 cut(s)	301, 346, 777, 1731, 1933, 2201
ApaLI	GTGCAC	1 cut(s)	2008
ApeKI	GCWGC	8 cut(s)	266, 269, 1305, 1351, 1428, 1817, 1850, 2399
ApoI	RAATTY	9 cut(s)	196, 281, 892, 973, 1201, 1372, 1460, 1622, 1803
AseI	ATTAAT	1 cut(s)	459
Asp700I	GAANNNNTTC	2 cut(s)	407, 1710
AspS9I	GGNCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2110
AsuC2I	CCSGG	1 cut(s)	548
AsuHPI	GGTGA	6 cut(s)	16, 403, 760, 1031, 1111, 1859
AsuII	TTCGAA	1 cut(s)	122
AsuNHI	GCTAGC	1 cut(s)	1424
AvaI	CYCGRG	2 cut(s)	252, 2249
AvaII	GGWCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2110
AxyI	CCTNAGG	1 cut(s)	1745
BaeGI	GKGCMC	2 cut(s)	849, 2012
BalI	TGGCCA	2 cut(s)	348, 1733
BanII	GRGCYC	1 cut(s)	1830
BauI	CACGAG	1 cut(s)	1783
BbsI	GAAGAC	2 cut(s)	1334, 1886
Bbv12I	GWGCWC	1 cut(s)	2012
BbvI	GCAGC	8 cut(s)	278, 281, 1292, 1338, 1415, 1804, 1862, 2386
BccI	CCATC	4 cut(s)	595, 1559, 2212, 2354
BceAI	ACGGC	2 cut(s)	102, 764
BcgI	CGANNNNNNTGC	2 cut(s)	1333, 1367
BciT130I	CCWGG	5 cut(s)	345, 569, 1475, 1484, 2307
BciVI	GTATCC	3 cut(s)	466, 1069, 2321
BclI	TGATCA	1 cut(s)	1960
BcnI	CCSGG	1 cut(s)	548
BcoDI	GTCTC	6 cut(s)	956, 1001, 1191, 1680, 2156, 2249
BcuI	ACTAGT	1 cut(s)	16
BfaI	CTAG	5 cut(s)	17, 210, 1212, 1425, 2096
BfmI	CTRYAG	2 cut(s)	375, 732
BfrI	CTTAAG	1 cut(s)	2147
BfuAI	ACCTGC	2 cut(s)	1779, 2026
BfuI	GTATCC	3 cut(s)	466, 1069, 2321
BisI	GCNGC	8 cut(s)	267, 270, 1306, 1352, 1429, 1818, 1851, 2400
BlsI	GCNGC	8 cut(s)	268, 271, 1307, 1353, 1430, 1819, 1852, 2401
Bme1390I	CCNGG	6 cut(s)	345, 548, 569, 1475, 1484, 2307
Bme18I	GGWCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2110
BmeT110I	CYCGRG	2 cut(s)	252, 2249
BmgT120I	GGNCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2110
BmiI	GGNNCC	7 cut(s)	314, 654, 1741, 1751, 1829, 2112, 2277
BmrFI	CCNGG	6 cut(s)	345, 548, 569, 1475, 1484, 2307
BmrI	ACTGGG	1 cut(s)	814
BmsI	GCATC	5 cut(s)	541, 592, 1322, 1477, 2386
BmtI	GCTAGC	1 cut(s)	1428
BmuI	ACTGGG	1 cut(s)	814
BpiI	GAAGAC	2 cut(s)	1334, 1886
Bpu14I	TTCGAA	1 cut(s)	122
BpuMI	CCSGG	1 cut(s)	548
Bsa29I	ATCGAT	1 cut(s)	2358
BsaHI	GRCGYC	1 cut(s)	1524
BsaI	GGTCTC	1 cut(s)	1191
BsaJI	CCNNGG	7 cut(s)	139, 343, 682, 828, 1194, 2039, 2323
Bse118I	RCCGGY	1 cut(s)	303
Bse1I	ACTGG	3 cut(s)	809, 1021, 1849
Bse21I	CCTNAGG	1 cut(s)	1745
Bse3DI	GCAATG	2 cut(s)	1168, 2076
BseBI	CCWGG	5 cut(s)	345, 569, 1475, 1484, 2307
BseCI	ATCGAT	1 cut(s)	2358
BseDI	CCNNGG	7 cut(s)	139, 343, 682, 828, 1194, 2039, 2323
BseGI	GGATG	7 cut(s)	15, 556, 583, 1217, 1313, 1492, 1906
BseMI	GCAATG	2 cut(s)	1168, 2076
BseMII	CTCAG	7 cut(s)	50, 603, 1391, 1623, 1759, 2160, 2435
BseNI	ACTGG	3 cut(s)	809, 1021, 1849
BseRI	GAGGAG	1 cut(s)	2267
BseSI	GKGCMC	2 cut(s)	849, 2012
BseXI	GCAGC	8 cut(s)	278, 281, 1292, 1338, 1415, 1804, 1862, 2386
BsgI	GTGCAG	2 cut(s)	1869, 2250
Bsh1236I	CGCG	2 cut(s)	2183, 2439
BshFI	GGCC	6 cut(s)	303, 348, 779, 1733, 1935, 2203
BshVI	ATCGAT	1 cut(s)	2358
BsiHKAI	GWGCWC	1 cut(s)	2012
BsiHKCI	CYCGRG	2 cut(s)	252, 2249
BsiSI	CCGG	3 cut(s)	304, 548, 2373
BslFI	GGGAC	3 cut(s)	198, 1582, 2379
BsmAI	GTCTC	6 cut(s)	956, 1001, 1191, 1680, 2156, 2249
BsmFI	GGGAC	3 cut(s)	198, 1582, 2379
BsnI	GGCC	6 cut(s)	303, 348, 779, 1733, 1935, 2203
Bso31I	GGTCTC	1 cut(s)	1191
BsoBI	CYCGRG	2 cut(s)	252, 2249
Bsp119I	TTCGAA	1 cut(s)	122
Bsp1286I	GDGCHC	3 cut(s)	849, 1830, 2012
Bsp143I	GATC	7 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2355
Bsp19I	CCATGG	1 cut(s)	828
BspACI	CCGC	6 cut(s)	114, 316, 1073, 1663, 2183, 2439
BspANI	GGCC	6 cut(s)	303, 348, 779, 1733, 1935, 2203
BspCNI	CTCAG	7 cut(s)	51, 604, 1390, 1624, 1758, 2161, 2434
BspDI	ATCGAT	1 cut(s)	2358
BspFNI	CGCG	2 cut(s)	2183, 2439
BspLI	GGNNCC	7 cut(s)	314, 654, 1741, 1751, 1829, 2112, 2277
BspMAI	CTGCAG	1 cut(s)	736
BspMI	ACCTGC	2 cut(s)	1779, 2026
BspOI	GCTAGC	1 cut(s)	1428
BspPI	GGATC	3 cut(s)	881, 1273, 1596
BspT104I	TTCGAA	1 cut(s)	122
BspTI	CTTAAG	1 cut(s)	2147
BspTNI	GGTCTC	1 cut(s)	1191
BsrDI	GCAATG	2 cut(s)	1168, 2076
BsrFI	RCCGGY	1 cut(s)	303
BsrI	ACTGG	3 cut(s)	809, 1021, 1849
BssAI	RCCGGY	1 cut(s)	303
BssECI	CCNNGG	7 cut(s)	139, 343, 682, 828, 1194, 2039, 2323
BssMI	GATC	7 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2355
BssNI	GRCGYC	1 cut(s)	1524
BssSI	CACGAG	1 cut(s)	1783
BssT1I	CCWWGG	5 cut(s)	139, 682, 828, 2039, 2323
Bst2BI	CACGAG	1 cut(s)	1783
Bst2UI	CCWGG	5 cut(s)	345, 569, 1475, 1484, 2307
Bst4CI	ACNGT	7 cut(s)	376, 631, 728, 883, 1087, 1691, 2345
Bst6I	CTCTTC	1 cut(s)	1012
BstACI	GRCGYC	1 cut(s)	1524
BstAFI	CTTAAG	1 cut(s)	2147
BstAPI	GCANNNNNTGC	1 cut(s)	2396
BstBI	TTCGAA	1 cut(s)	122
BstC8I	GCNNGC	4 cut(s)	305, 618, 1426, 2093
BstDEI	CTNAG	8 cut(s)	59, 202, 612, 1377, 1632, 1745, 2169, 2421
BstDSI	CCRYGG	2 cut(s)	828, 1194
BstF5I	GGATG	7 cut(s)	15, 556, 583, 1217, 1313, 1492, 1906
BstFNI	CGCG	2 cut(s)	2183, 2439
BstKTI	GATC	7 cut(s)	889, 1158, 1268, 1604, 1703, 1963, 2358
BstMAI	GTCTC	6 cut(s)	956, 1001, 1191, 1680, 2156, 2249
BstMBI	GATC	7 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2355
BstMWI	GCNNNNNNNGC	7 cut(s)	1280, 1357, 1922, 1952, 2066, 2396, 2408
BstNI	CCWGG	5 cut(s)	345, 569, 1475, 1484, 2307
BstNSI	RCATGY	1 cut(s)	2095
BstSCI	CCNGG	6 cut(s)	343, 546, 567, 1473, 1482, 2305
BstSFI	CTRYAG	2 cut(s)	375, 732
BstSLI	GKGCMC	2 cut(s)	849, 2012
BstUI	CGCG	2 cut(s)	2183, 2439
BstV1I	GCAGC	8 cut(s)	278, 281, 1292, 1338, 1415, 1804, 1862, 2386
BstV2I	GAAGAC	2 cut(s)	1334, 1886
BstX2I	RGATCY	2 cut(s)	1265, 1601
BstXI	CCANNNNNNTGG	1 cut(s)	1760
BstYI	RGATCY	2 cut(s)	1265, 1601
Bsu15I	ATCGAT	1 cut(s)	2358
Bsu36I	CCTNAGG	1 cut(s)	1745
BsuI	GTATCC	3 cut(s)	466, 1069, 2321
BsuRI	GGCC	6 cut(s)	303, 348, 779, 1733, 1935, 2203
BsuTUI	ATCGAT	1 cut(s)	2358
BtgI	CCRYGG	2 cut(s)	828, 1194
BtsCI	GGATG	7 cut(s)	15, 556, 583, 1217, 1313, 1492, 1906
BtsI	GCAGTG	3 cut(s)	554, 741, 816
BtsIMutI	CAGTG	6 cut(s)	554, 741, 816, 1096, 1842, 2350
BveI	ACCTGC	2 cut(s)	1779, 2026
Cac8I	GCNNGC	4 cut(s)	305, 618, 1426, 2093
Cfr10I	RCCGGY	1 cut(s)	303
Cfr13I	GGNCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2110
ClaI	ATCGAT	1 cut(s)	2358
CseI	GACGC	2 cut(s)	1513, 2396
CsiI	ACCWGGT	1 cut(s)	2305
Csp6I	GTAC	6 cut(s)	182, 395, 712, 914, 1726, 1977
CspCI	CAANNNNNGTGG	2 cut(s)	2103, 2138
CviQI	GTAC	6 cut(s)	182, 395, 712, 914, 1726, 1977
DdeI	CTNAG	8 cut(s)	59, 202, 612, 1377, 1632, 1745, 2169, 2421
DpnI	GATC	7 cut(s)	888, 1157, 1267, 1603, 1702, 1962, 2357
DpnII	GATC	7 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2355
DraI	TTTAAA	1 cut(s)	2025
DraIII	CACNNNGTG	1 cut(s)	1672
DrdI	GACNNNNNNGTC	1 cut(s)	1393
DseDI	GACNNNNNNGTC	1 cut(s)	1393
EaeI	YGGCCR	2 cut(s)	346, 1731
Eam1104I	CTCTTC	1 cut(s)	1012
EarI	CTCTTC	1 cut(s)	1012
EciI	GGCGGA	1 cut(s)	305
Eco130I	CCWWGG	5 cut(s)	139, 682, 828, 2039, 2323
Eco24I	GRGCYC	1 cut(s)	1830
Eco31I	GGTCTC	1 cut(s)	1191
Eco32I	GATATC	1 cut(s)	1117
Eco47I	GGWCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2110
Eco57I	CTGAAG	1 cut(s)	843
Eco81I	CCTNAGG	1 cut(s)	1745
Eco88I	CYCGRG	2 cut(s)	252, 2249
EcoO109I	RGGNCCY	1 cut(s)	653
EcoRI	GAATTC	1 cut(s)	1622
EcoRII	CCWGG	5 cut(s)	343, 567, 1473, 1482, 2305
EcoRV	GATATC	1 cut(s)	1117
EcoT14I	CCWWGG	5 cut(s)	139, 682, 828, 2039, 2323
EcoT38I	GRGCYC	1 cut(s)	1830
ErhI	CCWWGG	5 cut(s)	139, 682, 828, 2039, 2323
FalI	AAGNNNNNCTT	2 cut(s)	2005, 2037
FaqI	GGGAC	3 cut(s)	198, 1582, 2379
FauNDI	CATATG	1 cut(s)	574
FbaI	TGATCA	1 cut(s)	1960
FblI	GTMKAC	1 cut(s)	1397
Fnu4HI	GCNGC	8 cut(s)	267, 270, 1306, 1352, 1429, 1818, 1851, 2400
FokI	GGATG	7 cut(s)	22, 563, 570, 1204, 1300, 1499, 1913
FriOI	GRGCYC	1 cut(s)	1830
Fsp4HI	GCNGC	8 cut(s)	267, 270, 1306, 1352, 1429, 1818, 1851, 2400
FspBI	CTAG	5 cut(s)	17, 210, 1212, 1425, 2096
GluI	GCNGC	8 cut(s)	267, 270, 1306, 1352, 1429, 1818, 1851, 2400
HaeIII	GGCC	6 cut(s)	303, 348, 779, 1733, 1935, 2203
HapII	CCGG	3 cut(s)	304, 548, 2373
HgaI	GACGC	2 cut(s)	1513, 2396
Hin1I	GRCGYC	1 cut(s)	1524
HincII	GTYRAC	3 cut(s)	1398, 2053, 2197
HindII	GTYRAC	3 cut(s)	1398, 2053, 2197
HindIII	AAGCTT	1 cut(s)	1652
HinfI	GANTC	8 cut(s)	37, 359, 481, 994, 1103, 1242, 1711, 2227
HpaII	CCGG	3 cut(s)	304, 548, 2373
HphI	GGTGA	6 cut(s)	16, 403, 760, 1031, 1111, 1859
Hpy188III	TCNNGA	9 cut(s)	58, 158, 400, 418, 998, 1100, 1747, 1958, 2231
Hpy99I	CGWCG	2 cut(s)	1529, 2285
HpyAV	CCTTC	8 cut(s)	240, 293, 424, 507, 632, 1061, 2080, 2122
HpyCH4III	ACNGT	7 cut(s)	376, 631, 728, 883, 1087, 1691, 2345
HpyCH4IV	ACGT	1 cut(s)	843
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1280, 1357, 1922, 1952, 2066, 2396, 2408
HpyF3I	CTNAG	8 cut(s)	59, 202, 612, 1377, 1632, 1745, 2169, 2421
HpySE526I	ACGT	1 cut(s)	843
Hsp92I	GRCGYC	1 cut(s)	1524
KroI	GCCGGC	1 cut(s)	303
KroNI	GCCGGC	1 cut(s)	305
Ksp22I	TGATCA	1 cut(s)	1960
Kzo9I	GATC	7 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2355
LmnI	GCTCC	4 cut(s)	564, 598, 1749, 1833
Lsp1109I	GCAGC	8 cut(s)	278, 281, 1292, 1338, 1415, 1804, 1862, 2386
LweI	GCATC	5 cut(s)	541, 592, 1322, 1477, 2386
MabI	ACCWGGT	1 cut(s)	2305
MaeI	CTAG	5 cut(s)	17, 210, 1212, 1425, 2096
MaeII	ACGT	1 cut(s)	843
MaeIII	GTNAC	5 cut(s)	130, 379, 463, 781, 1019
MalI	GATC	7 cut(s)	888, 1157, 1267, 1603, 1702, 1962, 2357
MboI	GATC	7 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2355
MfeI	CAATTG	1 cut(s)	528
MflI	RGATCY	2 cut(s)	1265, 1601
MhlI	GDGCHC	3 cut(s)	849, 1830, 2012
MlsI	TGGCCA	2 cut(s)	348, 1733
MluNI	TGGCCA	2 cut(s)	348, 1733
MlyI	GAGTC	3 cut(s)	368, 475, 1003
MmeI	TCCRAC	2 cut(s)	1080, 1122
Mox20I	TGGCCA	2 cut(s)	348, 1733
MroNI	GCCGGC	1 cut(s)	303
MroXI	GAANNNNTTC	2 cut(s)	407, 1710
MscI	TGGCCA	2 cut(s)	348, 1733
MseI	TTAA	9 cut(s)	459, 486, 522, 641, 1986, 2024, 2148, 2318, 2430
MslI	CAYNNNNRTG	4 cut(s)	921, 1758, 1845, 1872
Msp20I	TGGCCA	2 cut(s)	348, 1733
MspA1I	CMGCKG	2 cut(s)	1982, 2168
MspCI	CTTAAG	1 cut(s)	2147
MspI	CCGG	3 cut(s)	304, 548, 2373
MspR9I	CCNGG	6 cut(s)	345, 548, 569, 1475, 1484, 2307
MunI	CAATTG	1 cut(s)	528
MvaI	CCWGG	5 cut(s)	345, 569, 1475, 1484, 2307
MvnI	CGCG	2 cut(s)	2183, 2439
MwoI	GCNNNNNNNGC	7 cut(s)	1280, 1357, 1922, 1952, 2066, 2396, 2408
NaeI	GCCGGC	1 cut(s)	305
NciI	CCSGG	1 cut(s)	548
NcoI	CCATGG	1 cut(s)	828
NdeI	CATATG	1 cut(s)	574
NdeII	GATC	7 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2355
NgoMIV	GCCGGC	1 cut(s)	303
NheI	GCTAGC	1 cut(s)	1424
NlaIV	GGNNCC	7 cut(s)	314, 654, 1741, 1751, 1829, 2112, 2277
NmuCI	GTSAC	3 cut(s)	130, 781, 1019
NspI	RCATGY	1 cut(s)	2095
NspV	TTCGAA	1 cut(s)	122
OliI	CACNNNNGTG	1 cut(s)	1845
PaeI	GCATGC	1 cut(s)	2095
PaeR7I	CTCGAG	2 cut(s)	252, 2249
PdiI	GCCGGC	1 cut(s)	305
PdmI	GAANNNNTTC	2 cut(s)	407, 1710
PfeI	GAWTC	5 cut(s)	37, 1103, 1242, 1711, 2227
PflMI	CCANNNNNTGG	2 cut(s)	355, 2107
PfoI	TCCNGGA	3 cut(s)	546, 1473, 1482
PkrI	GCNGC	8 cut(s)	268, 271, 1307, 1353, 1430, 1819, 1852, 2401
PleI	GAGTC	3 cut(s)	367, 475, 1002
PpsI	GAGTC	3 cut(s)	367, 475, 1002
PpuMI	RGGWCCY	1 cut(s)	653
PshBI	ATTAAT	1 cut(s)	459
Psp5II	RGGWCCY	1 cut(s)	653
Psp6I	CCWGG	5 cut(s)	343, 567, 1473, 1482, 2305
PspGI	CCWGG	5 cut(s)	343, 567, 1473, 1482, 2305
PspN4I	GGNNCC	7 cut(s)	314, 654, 1741, 1751, 1829, 2112, 2277
PspPI	GGNCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2110
PspPPI	RGGWCCY	1 cut(s)	653
PspXI	VCTCGAGB	2 cut(s)	252, 2249
PstI	CTGCAG	1 cut(s)	736
PsuI	RGATCY	2 cut(s)	1265, 1601
PvuII	CAGCTG	2 cut(s)	1982, 2168
RsaI	GTAC	6 cut(s)	183, 396, 713, 915, 1727, 1978
RsaNI	GTAC	6 cut(s)	182, 395, 712, 914, 1726, 1977
RseI	CAYNNNNRTG	4 cut(s)	921, 1758, 1845, 1872
SalI	GTCGAC	1 cut(s)	1396
SaqAI	TTAA	9 cut(s)	459, 486, 522, 641, 1986, 2024, 2148, 2318, 2430
SatI	GCNGC	8 cut(s)	267, 270, 1306, 1352, 1429, 1818, 1851, 2400
Sau3AI	GATC	7 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2355
Sau96I	GGNCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2110
SchI	GAGTC	3 cut(s)	368, 475, 1003
ScrFI	CCNGG	6 cut(s)	345, 548, 569, 1475, 1484, 2307
SduI	GDGCHC	3 cut(s)	849, 1830, 2012
SexAI	ACCWGGT	1 cut(s)	2305
SfaNI	GCATC	5 cut(s)	541, 592, 1322, 1477, 2386
SfcI	CTRYAG	2 cut(s)	375, 732
Sfr274I	CTCGAG	2 cut(s)	252, 2249
SfuI	TTCGAA	1 cut(s)	122
SinI	GGWCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2110
SlaI	CTCGAG	2 cut(s)	252, 2249
SmiMI	CAYNNNNRTG	4 cut(s)	921, 1758, 1845, 1872
SmlI	CTYRAG	3 cut(s)	252, 2147, 2249
SmoI	CTYRAG	3 cut(s)	252, 2147, 2249
SpeI	ACTAGT	1 cut(s)	16
SphI	GCATGC	1 cut(s)	2095
SsiI	CCGC	6 cut(s)	114, 316, 1073, 1663, 2183, 2439
SspMI	CTAG	5 cut(s)	17, 210, 1212, 1425, 2096
StyD4I	CCNGG	6 cut(s)	343, 546, 567, 1473, 1482, 2305
StyI	CCWWGG	5 cut(s)	139, 682, 828, 2039, 2323
TaaI	ACNGT	7 cut(s)	376, 631, 728, 883, 1087, 1691, 2345
TaiI	ACGT	1 cut(s)	846
TatI	WGTACW	4 cut(s)	181, 394, 1725, 1976
TfiI	GAWTC	5 cut(s)	37, 1103, 1242, 1711, 2227
Tru1I	TTAA	9 cut(s)	459, 486, 522, 641, 1986, 2024, 2148, 2318, 2430
Tru9I	TTAA	9 cut(s)	459, 486, 522, 641, 1986, 2024, 2148, 2318, 2430
TscAI	CASTG	6 cut(s)	561, 741, 823, 1096, 1849, 2350
TseFI	GTSAC	3 cut(s)	130, 781, 1019
TseI	GCWGC	8 cut(s)	266, 269, 1305, 1351, 1428, 1817, 1850, 2399
Tsp45I	GTSAC	3 cut(s)	130, 781, 1019
TspGWI	ACGGA	2 cut(s)	1183, 1752
TspRI	CASTG	6 cut(s)	561, 741, 823, 1096, 1849, 2350
Van91I	CCANNNNNTGG	2 cut(s)	355, 2107
Vha464I	CTTAAG	1 cut(s)	2147
VneI	GTGCAC	1 cut(s)	2008
VpaK11BI	GGWCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2110
VspI	ATTAAT	1 cut(s)	459
XapI	RAATTY	9 cut(s)	196, 281, 892, 973, 1201, 1372, 1460, 1622, 1803
XceI	RCATGY	1 cut(s)	2095
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1782, 1894
XhoI	CTCGAG	2 cut(s)	252, 2249
XmiI	GTMKAC	1 cut(s)	1397
XmnI	GAANNNNTTC	2 cut(s)	407, 1710
XspI	CTAG	5 cut(s)	17, 210, 1212, 1425, 2096

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.