Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004410

Physical Location & Seq

Genomic Coordinates Forward (+)

28992823 .. 28996907

Gene Structure 4085 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ31399

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2526 bp

ATGAAACTACTGAGTTGGGTACCATTGGTTTTGGCCATTGTTGTGTTTATGAGTCATGGAGCCTCTGGTTCATTTAATCCTCTCGATAACTACTTGATTGCTTGTGGTTCTTCGAAAAATATCACATTCCAAGGCCGAACCTTTGTTCCTGATACACTGCAATCTTCATTTGTACTGAAAAGTGCAAATTCTTCAGTTGCTAGCTCCAGTTCCAATGCCCCTTCTCCTATTTACCAATCTGCTCGAATTTTCAAGGAAACATCTTCCTATAAGTTCAAAATCCAGCAAGAAGGCCGGCATTGGGTCCGCCTTTATTTCTACCCATTAGCAAACTCAGGCCAAAACTTGGCTTCTGCTCCGATAACTGTGGTCACTGATAGCTTTGTACTCTTGAACAACTTCACTTTCAAGAACTATAATGGTTCTTACTTGTTCAAGGAGTATGTAATCAACGTTACTTCAGATAGTTTGACCCTCACCATCATTCCTTCAAACAGTTCAGTTGCTTTTGTTAATGCAATTGAAGTGGTCTCAATCCCAGATGAACTTATCCCTGATCAGGCATATGGTGTAAATCCATCTGCTCCTTTTAGTGGCCTTTCTGCACTTGCCCTTCAAACAATGTACCGATTAAACATGGGGGGTCCTTTACTCACCGCTGACAATGATACCCTTGAAAGAACTTGGGAGAATGATGTGAAATACCTTCATGTCGACAGCTCTGCAGTGAATGTATCAATCAACCCTGCCAGTGTGAAGTATCATGTGGGTGTCACACCAGAGATAGCACCAAACTGGGTCTATGCCACTGCTGAAGCCATGGGAGATGCAAATGTGCCAAATGGGAACTTCAACATAACTTGGGTCTTTCAGGCAGACCCAAATTATTTGTATCTTGTTCGGGTACATTTCTGTGATATTGTCAGCAAGGCACTGAATAACCTAGTTTTCAATCTTTTCATCAATTCCAACAATGTGCTCTCGAGTCTCGACCTGTCCTCCATTACTGGTGACTTGGGTGTGCCGTATTACAAAGACTTTGTTTCCAACTCCTCAGCAGATTCAAATACTTTGACAGTCAGTGTTGGTCCAGATTCAATGGCTGATGTCACTAATGCAATTCTGAATGGCTTGGAGATTTTGAAGATCAGCAATGACTTGGGGAGCTTGGATGGGTCTTTGTCTGTCCAGAGTCTCCTTCCCAGTTCACCCTCAAAGAGTAATAACATGGTAATCATCATTGGGTGTGTTGTCGGAGCTGTAGCTCTTGTGGCAATTATTGCTCTCTTATATTGGTACTTGGCATCTCGCAATTCAAAGACTACTCCTAACCAAGGTCATCCATGGCCACATCTGCCCTCGTATGGAAACTCTCAGACAATGACCAAAATGTCAACAACTTCACAAAAGAGTGGAACAGCTAGCTGCATCTCATTAGCTTCCTCCAATCTTGGCCGCTTATTCATGTTCCAAGAAATCCTGGATGCAACCAACAAGTTTGATGAGAGCCTACTTCTCGGGGTTGGCGGTTTTGGCAGGGTTTACAAGGGAACACTAGAAGATGGGACAAAAGTAGCTGTTAAAAGAGGAAACCCCAGATCAGAACAAGGTCTTGCTGAATTCCGAACTGAGATTGAAATGTTATCGAAGCTTCGTCACCGCCACCTTGTGTCTCTTATCGGTTATTGTGATGAAAGGTCAGAGATGATTCTTGTGTATGAATACATGGCTAATGGACCGCTCCGGAGCCATTTGTATGGAACAGATTTGCCAAACTTGTCATGGAAGCTACGCCTTGAAATTTGCATTGGGGCTGCAAGAGGACTCCATTATCTCCACACCGGTGCAGCTCAAAGCATAATTCACCGAGATGTCAAGACAACAAACATTCTCTTGGATGAGAACTTTTTAGCCAAAGTTGCAGATTTTGGCCTCTCAAAAGCAGGTCCAGCTATAGATCAGACTCATGTCAGTACGGCTGTTAAGGGTAGTTTTGGTTACCTTGATCCTGAATACTTTAGAAGGCAGCAGCTCACTGAGAAATCAGACGTGTATTCATTTGGAGTAGTTCTAATGGAAGTTCTTTGCACAAGACCAGCTTTGAACCCGGTTCTTCCCAGAGAGCAAGTGAACATTGCAGAATGGGCAATGACCTGGCAAAAGAAGGGCATGCTGGACCAAATCATGGACTCGAATCTGGCTGGGAAGGTAAATTCAGCTTCTCTTAAGAAGTTTGGTGAGACAGCTGAGAAGTGCCTTGCCGAGTATGGTGTTGACAGGCCATCAATGGGAGATGTCTTGTGGAATCTTGAATATGCTCTTCAGCTTGAGGAGACTTCGTCTGCGCTCATGGAACCAGAAGATAACAGCACAAACCACATACAAGACATCGAATTGACACCACCAGAGCCATTTGACAACAGTGTGAGTATGATTGAGGGAGGGCACTCTGGCACTGATGATGACACTCAAGATGCTGCCACAAGTGCTGTGTTCTCTCAGCTAGTAAATCCTCGTGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

841

Amino Acids

91.96

Weight (kDa)

5.31

Isoelectric Point (pI)

37.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	33 - 382	2e-31	Malectin-like domain
Pkinase	PF00069	505 - 766	6.1e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	506 - 765	2.6e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54380
fragaria_vesca	FvH4_2g16820 FvH4_2g16820 FvH4_3g20780 FvH4_3g20780 FvH4_3g20780
malus_domestica	MD03G1221300.v1.1 MD11G1238700.v1.1
prunus_persica	Prupe.4G188000_v2.0.a1
pyrus_communis	pycom03g17020 pycom11g21030
rosa_chinensis	RchiOBHm_Chr5g0035071 RchiOBHm_Chr6g0280941
rosa_laevigata	RLG00000013014 RLG00000033592
rosa_multiflora	Rmu_sc0005362.1_g000028 Rmu_sc0023551.1_g000001 Rmu_sc0023552.1_g000001
rosa_roxburghii	Rroxscaffold_1G00045340 Rroxscaffold_7G00187470
rosa_rugosa	Rorug05G0149600 Rorug06G0137100
rosa_samantha	Rh5AG242600 Rh5BG242200 Rh5CG273700 Rh5DG250800 Rh6AG249400 Rh6BG251500 Rh6CG252100 Rh6DG243900
rosa_wichuraiana	Rw5G022160 Rw6G021580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1390
Acc36I	ACCTGC	1 cut(s)	1934
Acc65I	GGTACC	1 cut(s)	19
AccB1I	GGYRCC	1 cut(s)	19
AccB7I	CCANNNNNTGG	2 cut(s)	346, 2185
AccBSI	CCGCTC	1 cut(s)	1741
AccI	GTMKAC	1 cut(s)	714
AccIII	TCCGGA	1 cut(s)	1743
AciI	CCGC	6 cut(s)	307, 657, 1456, 1527, 1660, 1739
AclI	AACGTT	1 cut(s)	453
AclWI	GGATC	1 cut(s)	2000
AcoI	YGGCCR	3 cut(s)	33, 1346, 1453
AcsI	RAATTY	5 cut(s)	187, 246, 1619, 1800, 2212
AcuI	CTGAAG	4 cut(s)	177, 444, 834, 2306
AdeI	CACNNNGTG	1 cut(s)	1669
AfaI	GTAC	7 cut(s)	21, 174, 387, 626, 906, 1298, 1975
AfiI	CCNNNNNNNGG	8 cut(s)	301, 346, 559, 593, 1334, 1364, 2185, 2288
AflII	CTTAAG	1 cut(s)	2225
AflIII	ACRYGT	1 cut(s)	2049
AgeI	ACCGGT	1 cut(s)	1841
AjiI	CACGTC	1 cut(s)	2050
AjnI	CCWGG	2 cut(s)	1479, 2153
AjuI	GAANNNNNNNTTGG	2 cut(s)	1791, 1823
AleI	CACNNNNGTG	1 cut(s)	1842
AloI	GAACNNNNNNTCC	2 cut(s)	130, 162
Alw21I	GWGCWC	1 cut(s)	981
Alw26I	GTCTC	6 cut(s)	535, 992, 1199, 1677, 2234, 2327
AlwI	GGATC	1 cut(s)	2000
Ama87I	CYCGRG	2 cut(s)	982, 1517
Aor13HI	TCCGGA	1 cut(s)	1743
AoxI	GGCC	9 cut(s)	33, 133, 292, 337, 595, 1346, 1453, 1930, 2279
ApeKI	GCWGC	6 cut(s)	1425, 1814, 1847, 2026, 2029, 2477
ApoI	RAATTY	5 cut(s)	187, 246, 1619, 1800, 2212
AsiGI	ACCGGT	1 cut(s)	1841
Asp700I	GAANNNNTTC	1 cut(s)	398
Asp718I	GGTACC	1 cut(s)	19
AspLEI	GCGC	1 cut(s)	2347
AspS9I	GGNCC	6 cut(s)	304, 644, 1088, 1736, 1946, 2176
AsuC2I	CCSGG	1 cut(s)	2108
AsuHPI	GGTGA	7 cut(s)	469, 646, 1022, 1200, 1649, 1856, 2249
AsuII	TTCGAA	1 cut(s)	113
AsuNHI	GCTAGC	2 cut(s)	200, 1421
AvaI	CYCGRG	2 cut(s)	982, 1517
AvaII	GGWCC	6 cut(s)	304, 644, 1088, 1736, 1946, 2176
BaeGI	GKGCMC	1 cut(s)	2448
BalI	TGGCCA	2 cut(s)	35, 1348
BanI	GGYRCC	1 cut(s)	19
BauI	CACGAG	1 cut(s)	2514
Bbv12I	GWGCWC	1 cut(s)	981
BbvCI	CCTCAGC	1 cut(s)	1054
BbvI	GCAGC	6 cut(s)	1412, 1801, 1859, 2038, 2041, 2464
BccI	CCATC	5 cut(s)	488, 586, 1166, 1556, 2290
BceAI	ACGGC	2 cut(s)	1009, 1992
BcgI	CGANNNNNNTGC	2 cut(s)	704, 738
BciT130I	CCWGG	2 cut(s)	1481, 2155
BclI	TGATCA	1 cut(s)	556
BcnI	CCSGG	1 cut(s)	2108
BcoDI	GTCTC	6 cut(s)	535, 992, 1199, 1677, 2234, 2327
BfaI	CTAG	5 cut(s)	201, 944, 1422, 1556, 2504
BfmI	CTRYAG	3 cut(s)	723, 1260, 1953
BfrI	CTTAAG	1 cut(s)	2225
BfuAI	ACCTGC	1 cut(s)	1934
BisI	GCNGC	7 cut(s)	1426, 1456, 1815, 1848, 2027, 2030, 2478
BlsI	GCNGC	7 cut(s)	1427, 1457, 1816, 1849, 2028, 2031, 2479
Bme1390I	CCNGG	3 cut(s)	1481, 2108, 2155
Bme18I	GGWCC	6 cut(s)	304, 644, 1088, 1736, 1946, 2176
BmeT110I	CYCGRG	2 cut(s)	982, 1517
BmgBI	CACGTC	1 cut(s)	2050
BmgT120I	GGNCC	6 cut(s)	304, 644, 1088, 1736, 1946, 2176
BmiI	GGNNCC	6 cut(s)	21, 61, 305, 645, 1748, 2355
BmrFI	CCNGG	3 cut(s)	1481, 2108, 2155
BmrI	ACTGGG	2 cut(s)	805, 1197
BmsI	GCATC	5 cut(s)	817, 1313, 1437, 1474, 2464
BmtI	GCTAGC	2 cut(s)	204, 1425
BmuI	ACTGGG	2 cut(s)	805, 1197
BoxI	GACNNNNGTC	1 cut(s)	1967
BpmI	CTGGAG	1 cut(s)	190
Bpu10I	CCTNAGC	1 cut(s)	1054
Bpu14I	TTCGAA	1 cut(s)	113
BpuEI	CTTGAG	2 cut(s)	2348, 2454
BpuMI	CCSGG	1 cut(s)	2108
BsaI	GGTCTC	1 cut(s)	535
BsaJI	CCNNGG	4 cut(s)	130, 819, 1333, 1343
BsaWI	WCCGGW	2 cut(s)	1743, 1841
BsaXI	ACNNNNNCTCC	4 cut(s)	983, 1013, 2324, 2354
Bsc4I	CCNNNNNNNGG	8 cut(s)	301, 346, 559, 593, 1334, 1364, 2185, 2288
Bse118I	RCCGGY	2 cut(s)	294, 1841
Bse1I	ACTGG	5 cut(s)	207, 750, 800, 1012, 1203
Bse3DI	GCAATG	3 cut(s)	1159, 2133, 2154
BseAI	TCCGGA	1 cut(s)	1743
BseBI	CCWGG	2 cut(s)	1481, 2155
BseDI	CCNNGG	4 cut(s)	130, 819, 1333, 1343
BseGI	GGATG	4 cut(s)	1177, 1339, 1489, 1903
BseLI	CCNNNNNNNGG	8 cut(s)	301, 346, 559, 593, 1334, 1364, 2185, 2288
BseMI	GCAATG	3 cut(s)	1159, 2133, 2154
BseMII	CTCAG	7 cut(s)	348, 1068, 1388, 1620, 2028, 2238, 2513
BseNI	ACTGG	5 cut(s)	207, 750, 800, 1012, 1203
BseRI	GAGGAG	2 cut(s)	1042, 2345
BseSI	GKGCMC	1 cut(s)	2448
BseXI	GCAGC	6 cut(s)	1412, 1801, 1859, 2038, 2041, 2464
BseYI	CCCAGC	1 cut(s)	2201
BsgI	GTGCAG	2 cut(s)	588, 1866
BshFI	GGCC	9 cut(s)	35, 135, 294, 339, 597, 1348, 1455, 1932, 2281
BshNI	GGYRCC	1 cut(s)	19
BshTI	ACCGGT	1 cut(s)	1841
BsiHKAI	GWGCWC	1 cut(s)	981
BsiHKCI	CYCGRG	2 cut(s)	982, 1517
BsiSI	CCGG	4 cut(s)	295, 1744, 1842, 2108
BslFI	GGGAC	1 cut(s)	1579
BslI	CCNNNNNNNGG	8 cut(s)	301, 346, 559, 593, 1334, 1364, 2185, 2288
BsmAI	GTCTC	6 cut(s)	535, 992, 1199, 1677, 2234, 2327
BsmFI	GGGAC	1 cut(s)	1579
BsnI	GGCC	9 cut(s)	35, 135, 294, 339, 597, 1348, 1455, 1932, 2281
Bso31I	GGTCTC	1 cut(s)	535
BsoBI	CYCGRG	2 cut(s)	982, 1517
Bsp119I	TTCGAA	1 cut(s)	113
Bsp1286I	GDGCHC	2 cut(s)	981, 2448
Bsp13I	TCCGGA	1 cut(s)	1743
Bsp143I	GATC	5 cut(s)	556, 1146, 1598, 1957, 2005
Bsp19I	CCATGG	2 cut(s)	819, 1343
BspACI	CCGC	6 cut(s)	307, 657, 1456, 1527, 1660, 1739
BspANI	GGCC	9 cut(s)	35, 135, 294, 339, 597, 1348, 1455, 1932, 2281
BspCNI	CTCAG	7 cut(s)	347, 1067, 1387, 1621, 2029, 2239, 2512
BspEI	TCCGGA	1 cut(s)	1743
BspLI	GGNNCC	6 cut(s)	21, 61, 305, 645, 1748, 2355
BspMAI	CTGCAG	1 cut(s)	727
BspMI	ACCTGC	1 cut(s)	1934
BspOI	GCTAGC	2 cut(s)	204, 1425
BspPI	GGATC	1 cut(s)	2000
BspQI	GCTCTTC	1 cut(s)	2325
BspT104I	TTCGAA	1 cut(s)	113
BspT107I	GGYRCC	1 cut(s)	19
BspTI	CTTAAG	1 cut(s)	2225
BspTNI	GGTCTC	1 cut(s)	535
BsrBI	CCGCTC	1 cut(s)	1741
BsrDI	GCAATG	3 cut(s)	1159, 2133, 2154
BsrFI	RCCGGY	2 cut(s)	294, 1841
BsrI	ACTGG	5 cut(s)	207, 750, 800, 1012, 1203
BssAI	RCCGGY	2 cut(s)	294, 1841
BssECI	CCNNGG	4 cut(s)	130, 819, 1333, 1343
BssMI	GATC	5 cut(s)	556, 1146, 1598, 1957, 2005
BssSI	CACGAG	1 cut(s)	2514
BssT1I	CCWWGG	4 cut(s)	130, 819, 1333, 1343
Bst2BI	CACGAG	1 cut(s)	2514
Bst2UI	CCWGG	2 cut(s)	1481, 2155
Bst4CI	ACNGT	4 cut(s)	367, 497, 1078, 2423
Bst6I	CTCTTC	1 cut(s)	2325
BstAFI	CTTAAG	1 cut(s)	2225
BstAPI	GCANNNNNTGC	1 cut(s)	1280
BstBI	TTCGAA	1 cut(s)	113
BstC8I	GCNNGC	4 cut(s)	202, 296, 1423, 2171
BstDEI	CTNAG	8 cut(s)	11, 334, 1054, 1374, 1629, 2037, 2247, 2499
BstDSI	CCRYGG	2 cut(s)	819, 1343
BstEII	GGTNACC	1 cut(s)	1997
BstENI	CCTNNNNNAGG	1 cut(s)	1332
BstF5I	GGATG	4 cut(s)	1177, 1339, 1489, 1903
BstHHI	GCGC	1 cut(s)	2347
BstKTI	GATC	5 cut(s)	559, 1149, 1601, 1960, 2008
BstMAI	GTCTC	6 cut(s)	535, 992, 1199, 1677, 2234, 2327
BstMBI	GATC	5 cut(s)	556, 1146, 1598, 1957, 2005
BstMWI	GCNNNNNNNGC	8 cut(s)	1271, 1280, 1354, 1533, 1919, 1949, 2144, 2486
BstNI	CCWGG	2 cut(s)	1481, 2155
BstNSI	RCATGY	1 cut(s)	2173
BstPAI	GACNNNNGTC	1 cut(s)	1967
BstPI	GGTNACC	1 cut(s)	1997
BstSCI	CCNGG	3 cut(s)	1479, 2106, 2153
BstSFI	CTRYAG	3 cut(s)	723, 1260, 1953
BstSLI	GKGCMC	1 cut(s)	2448
BstV1I	GCAGC	6 cut(s)	1412, 1801, 1859, 2038, 2041, 2464
BstXI	CCANNNNNNTGG	1 cut(s)	1757
BsuRI	GGCC	9 cut(s)	35, 135, 294, 339, 597, 1348, 1455, 1932, 2281
BtgI	CCRYGG	2 cut(s)	819, 1343
BtrI	CACGTC	1 cut(s)	2050
BtsCI	GGATG	4 cut(s)	1177, 1339, 1489, 1903
BtsI	GCAGTG	3 cut(s)	155, 732, 807
BveI	ACCTGC	1 cut(s)	1934
Cac8I	GCNNGC	4 cut(s)	202, 296, 1423, 2171
CfoI	GCGC	1 cut(s)	2347
Cfr10I	RCCGGY	2 cut(s)	294, 1841
Cfr13I	GGNCC	6 cut(s)	304, 644, 1088, 1736, 1946, 2176
Csp6I	GTAC	7 cut(s)	20, 173, 386, 625, 905, 1297, 1974
CspAI	ACCGGT	1 cut(s)	1841
CspCI	CAANNNNNGTGG	2 cut(s)	507, 542
CviQI	GTAC	7 cut(s)	20, 173, 386, 625, 905, 1297, 1974
DdeI	CTNAG	8 cut(s)	11, 334, 1054, 1374, 1629, 2037, 2247, 2499
DpnI	GATC	5 cut(s)	558, 1148, 1600, 1959, 2007
DpnII	GATC	5 cut(s)	556, 1146, 1598, 1957, 2005
DraIII	CACNNNGTG	1 cut(s)	1669
DrdI	GACNNNNNNGTC	1 cut(s)	1390
DseDI	GACNNNNNNGTC	1 cut(s)	1390
EaeI	YGGCCR	3 cut(s)	33, 1346, 1453
Eam1104I	CTCTTC	1 cut(s)	2325
EarI	CTCTTC	1 cut(s)	2325
EciI	GGCGGA	1 cut(s)	296
Eco130I	CCWWGG	4 cut(s)	130, 819, 1333, 1343
Eco31I	GGTCTC	1 cut(s)	535
Eco47I	GGWCC	6 cut(s)	304, 644, 1088, 1736, 1946, 2176
Eco57I	CTGAAG	4 cut(s)	177, 444, 834, 2306
Eco88I	CYCGRG	2 cut(s)	982, 1517
Eco91I	GGTNACC	1 cut(s)	1997
EcoNI	CCTNNNNNAGG	1 cut(s)	1332
EcoO109I	RGGNCCY	1 cut(s)	644
EcoO65I	GGTNACC	1 cut(s)	1997
EcoRI	GAATTC	1 cut(s)	1619
EcoRII	CCWGG	2 cut(s)	1479, 2153
EcoT14I	CCWWGG	4 cut(s)	130, 819, 1333, 1343
ErhI	CCWWGG	4 cut(s)	130, 819, 1333, 1343
FalI	AAGNNNNNCTT	2 cut(s)	2083, 2115
FaqI	GGGAC	1 cut(s)	1579
FauNDI	CATATG	1 cut(s)	565
FbaI	TGATCA	1 cut(s)	556
FblI	GTMKAC	1 cut(s)	714
Fnu4HI	GCNGC	7 cut(s)	1426, 1456, 1815, 1848, 2027, 2030, 2478
FokI	GGATG	4 cut(s)	1184, 1326, 1496, 1910
Fsp4HI	GCNGC	7 cut(s)	1426, 1456, 1815, 1848, 2027, 2030, 2478
FspBI	CTAG	5 cut(s)	201, 944, 1422, 1556, 2504
GlaI	GCGC	1 cut(s)	2346
GluI	GCNGC	7 cut(s)	1426, 1456, 1815, 1848, 2027, 2030, 2478
GsaI	CCCAGC	1 cut(s)	2205
GsuI	CTGGAG	1 cut(s)	190
HaeIII	GGCC	9 cut(s)	35, 135, 294, 339, 597, 1348, 1455, 1932, 2281
HapII	CCGG	4 cut(s)	295, 1744, 1842, 2108
HhaI	GCGC	1 cut(s)	2347
Hin6I	GCGC	1 cut(s)	2345
HinP1I	GCGC	1 cut(s)	2345
HincII	GTYRAC	3 cut(s)	715, 1395, 2275
HindII	GTYRAC	3 cut(s)	715, 1395, 2275
HindIII	AAGCTT	1 cut(s)	1649
HpaII	CCGG	4 cut(s)	295, 1744, 1842, 2108
HphI	GGTGA	7 cut(s)	469, 646, 1022, 1200, 1649, 1856, 2249
Hpy166II	GTNNAC	6 cut(s)	715, 1208, 1395, 1543, 2131, 2275
Hpy8I	GTNNAC	6 cut(s)	715, 1208, 1395, 1543, 2131, 2275
HpyAV	CCTTC	9 cut(s)	231, 284, 498, 623, 716, 1208, 2016, 2158, 2200
HpyCH4III	ACNGT	4 cut(s)	367, 497, 1078, 2423
HpyCH4IV	ACGT	2 cut(s)	453, 2049
HpyF10VI	GCNNNNNNNGC	8 cut(s)	1271, 1280, 1354, 1533, 1919, 1949, 2144, 2486
HpyF3I	CTNAG	8 cut(s)	11, 334, 1054, 1374, 1629, 2037, 2247, 2499
HpySE526I	ACGT	2 cut(s)	453, 2049
HspAI	GCGC	1 cut(s)	2345
Kpn2I	TCCGGA	1 cut(s)	1743
KpnI	GGTACC	1 cut(s)	23
KroI	GCCGGC	1 cut(s)	294
KroNI	GCCGGC	1 cut(s)	296
Ksp22I	TGATCA	1 cut(s)	556
Kzo9I	GATC	5 cut(s)	556, 1146, 1598, 1957, 2005
LguI	GCTCTTC	1 cut(s)	2325
LmnI	GCTCC	8 cut(s)	59, 209, 361, 589, 1164, 1256, 1746, 1746
Lsp1109I	GCAGC	6 cut(s)	1412, 1801, 1859, 2038, 2041, 2464
LweI	GCATC	5 cut(s)	817, 1313, 1437, 1474, 2464
MaeI	CTAG	5 cut(s)	201, 944, 1422, 1556, 2504
MaeII	ACGT	2 cut(s)	453, 2049
MaeIII	GTNAC	7 cut(s)	370, 454, 772, 1010, 1108, 1655, 1997
MalI	GATC	5 cut(s)	558, 1148, 1600, 1959, 2007
MbiI	CCGCTC	1 cut(s)	1741
MboI	GATC	5 cut(s)	556, 1146, 1598, 1957, 2005
MboII	GAAGA	9 cut(s)	102, 156, 183, 255, 1156, 1571, 2105, 2312, 2372
MfeI	CAATTG	1 cut(s)	519
MhlI	GDGCHC	2 cut(s)	981, 2448
MlsI	TGGCCA	2 cut(s)	35, 1348
MluNI	TGGCCA	2 cut(s)	35, 1348
MlyI	GAGTC	6 cut(s)	61, 994, 1201, 1818, 1957, 2183
MmeI	TCCRAC	3 cut(s)	993, 1071, 1234
Mox20I	TGGCCA	2 cut(s)	35, 1348
MroI	TCCGGA	1 cut(s)	1743
MroNI	GCCGGC	1 cut(s)	294
MroXI	GAANNNNTTC	1 cut(s)	398
MscI	TGGCCA	2 cut(s)	35, 1348
MseI	TTAA	6 cut(s)	75, 513, 632, 1581, 1983, 2226
MslI	CAYNNNNRTG	6 cut(s)	41, 768, 912, 1755, 1842, 1869
Msp20I	TGGCCA	2 cut(s)	35, 1348
MspA1I	CMGCKG	2 cut(s)	659, 2246
MspCI	CTTAAG	1 cut(s)	2225
MspI	CCGG	4 cut(s)	295, 1744, 1842, 2108
MspR9I	CCNGG	3 cut(s)	1481, 2108, 2155
MunI	CAATTG	1 cut(s)	519
MvaI	CCWGG	2 cut(s)	1481, 2155
MwoI	GCNNNNNNNGC	8 cut(s)	1271, 1280, 1354, 1533, 1919, 1949, 2144, 2486
NaeI	GCCGGC	1 cut(s)	296
NciI	CCSGG	1 cut(s)	2108
NcoI	CCATGG	2 cut(s)	819, 1343
NdeI	CATATG	1 cut(s)	565
NdeII	GATC	5 cut(s)	556, 1146, 1598, 1957, 2005
NgoMIV	GCCGGC	1 cut(s)	294
NheI	GCTAGC	2 cut(s)	200, 1421
NlaIV	GGNNCC	6 cut(s)	21, 61, 305, 645, 1748, 2355
NmeAIII	GCCGAG	1 cut(s)	2287
NmuCI	GTSAC	5 cut(s)	370, 772, 1010, 1108, 1655
NspI	RCATGY	1 cut(s)	2173
NspV	TTCGAA	1 cut(s)	113
OliI	CACNNNNGTG	1 cut(s)	1842
PaeI	GCATGC	1 cut(s)	2173
PaeR7I	CTCGAG	1 cut(s)	982
PciSI	GCTCTTC	1 cut(s)	2325
PdiI	GCCGGC	1 cut(s)	296
PdmI	GAANNNNTTC	1 cut(s)	398
PfeI	GAWTC	5 cut(s)	1061, 1094, 1708, 2194, 2305
PflFI	GACNNNGTC	1 cut(s)	2338
PflMI	CCANNNNNTGG	2 cut(s)	346, 2185
PfoI	TCCNGGA	1 cut(s)	1479
PinAI	ACCGGT	1 cut(s)	1841
PkrI	GCNGC	7 cut(s)	1427, 1457, 1816, 1849, 2028, 2031, 2479
PleI	GAGTC	6 cut(s)	60, 993, 1200, 1818, 1957, 2183
PpsI	GAGTC	6 cut(s)	60, 993, 1200, 1818, 1957, 2183
PpuMI	RGGWCCY	1 cut(s)	644
PshAI	GACNNNNGTC	1 cut(s)	1967
Psp1406I	AACGTT	1 cut(s)	453
Psp5II	RGGWCCY	1 cut(s)	644
Psp6I	CCWGG	2 cut(s)	1479, 2153
PspEI	GGTNACC	1 cut(s)	1997
PspFI	CCCAGC	1 cut(s)	2201
PspGI	CCWGG	2 cut(s)	1479, 2153
PspN4I	GGNNCC	6 cut(s)	21, 61, 305, 645, 1748, 2355
PspPI	GGNCC	6 cut(s)	304, 644, 1088, 1736, 1946, 2176
PspPPI	RGGWCCY	1 cut(s)	644
PstI	CTGCAG	1 cut(s)	727
PsyI	GACNNNGTC	1 cut(s)	2338
PvuII	CAGCTG	1 cut(s)	2246
RsaI	GTAC	7 cut(s)	21, 174, 387, 626, 906, 1298, 1975
RsaNI	GTAC	7 cut(s)	20, 173, 386, 625, 905, 1297, 1974
RseI	CAYNNNNRTG	6 cut(s)	41, 768, 912, 1755, 1842, 1869
SalI	GTCGAC	1 cut(s)	713
SapI	GCTCTTC	1 cut(s)	2325
SaqAI	TTAA	6 cut(s)	75, 513, 632, 1581, 1983, 2226
SatI	GCNGC	7 cut(s)	1426, 1456, 1815, 1848, 2027, 2030, 2478
Sau3AI	GATC	5 cut(s)	556, 1146, 1598, 1957, 2005
Sau96I	GGNCC	6 cut(s)	304, 644, 1088, 1736, 1946, 2176
SchI	GAGTC	6 cut(s)	61, 994, 1201, 1818, 1957, 2183
ScrFI	CCNGG	3 cut(s)	1481, 2108, 2155
SduI	GDGCHC	2 cut(s)	981, 2448
SfaNI	GCATC	5 cut(s)	817, 1313, 1437, 1474, 2464
SfcI	CTRYAG	3 cut(s)	723, 1260, 1953
Sfr274I	CTCGAG	1 cut(s)	982
SfuI	TTCGAA	1 cut(s)	113
SgrAI	CRCCGGYG	1 cut(s)	1841
SinI	GGWCC	6 cut(s)	304, 644, 1088, 1736, 1946, 2176
SlaI	CTCGAG	1 cut(s)	982
SmiMI	CAYNNNNRTG	6 cut(s)	41, 768, 912, 1755, 1842, 1869
SmlI	CTYRAG	4 cut(s)	982, 2225, 2327, 2469
SmoI	CTYRAG	4 cut(s)	982, 2225, 2327, 2469
SphI	GCATGC	1 cut(s)	2173
SsiI	CCGC	6 cut(s)	307, 657, 1456, 1527, 1660, 1739
SspMI	CTAG	5 cut(s)	201, 944, 1422, 1556, 2504
StyD4I	CCNGG	3 cut(s)	1479, 2106, 2153
StyI	CCWWGG	4 cut(s)	130, 819, 1333, 1343
TaaI	ACNGT	4 cut(s)	367, 497, 1078, 2423
TaiI	ACGT	2 cut(s)	456, 2052
TaqI	TCGA	9 cut(s)	84, 113, 244, 714, 983, 990, 1646, 2192, 2391
TatI	WGTACW	2 cut(s)	172, 385
TauI	GCSGC	1 cut(s)	1458
TfiI	GAWTC	5 cut(s)	1061, 1094, 1708, 2194, 2305
Tru1I	TTAA	6 cut(s)	75, 513, 632, 1581, 1983, 2226
Tru9I	TTAA	6 cut(s)	75, 513, 632, 1581, 1983, 2226
TseFI	GTSAC	5 cut(s)	370, 772, 1010, 1108, 1655
TseI	GCWGC	6 cut(s)	1425, 1814, 1847, 2026, 2029, 2477
Tsp45I	GTSAC	5 cut(s)	370, 772, 1010, 1108, 1655
Tth111I	GACNNNGTC	1 cut(s)	2338
Van91I	CCANNNNNTGG	2 cut(s)	346, 2185
Vha464I	CTTAAG	1 cut(s)	2225
VpaK11BI	GGWCC	6 cut(s)	304, 644, 1088, 1736, 1946, 2176
XagI	CCTNNNNNAGG	1 cut(s)	1332
XapI	RAATTY	5 cut(s)	187, 246, 1619, 1800, 2212
XceI	RCATGY	1 cut(s)	2173
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1779
XhoI	CTCGAG	1 cut(s)	982
XmiI	GTMKAC	1 cut(s)	714
XmnI	GAANNNNTTC	1 cut(s)	398
XspI	CTAG	5 cut(s)	201, 944, 1422, 1556, 2504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.