Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0004410

Physical Location & Seq

Genomic Coordinates Reverse (-)

34624569 .. 34627808

Gene Structure 3240 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1238700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGTTAAGGATGAAACTAGTAAATTGGGTAGCTTTGATTCTTGCTGTTGTTGTGTTCATGAGTTATAGGTCATCTGCTTCATTCACGGCTGTCGATAACTACCTAATTGTCTGCGGTTCTTCGAAAAATGTCACATTCCAAGGTCGTACCTTTGTTCCTGATACACAACAATCTTCCCTTGTACTAAAAAGTGCAAATTCCTTAGTTGCTAGCCCCAATGCTAATGCCCCTTCTCCACTTTACCAATCTGCTCGAGTTCTCAAGGGAGCAGCTTCTTACAAATTCAAAATCCAGCAAGAAGGCCGACATTGGGTCCGCCTTTATTTTTTCCCTCTTACAAGCCCTGGCCAAGATTTGGAGTCTGCTCAAATAACTGTAGTTACTGATAATTTTGTACTCTTGAACAACTTCACCTTCAAGAACTATAATGGTTCTTATCTGTTCAAGGAGTATGCAATTAATGTAACTTTGGATACCTTGACTCTTAACTTCATTCCTTCAAACAATTCAGTTGCTTTTGTTAATGCAATTGAAGTAGTTTCTATCCCGGATGCACTGCTTCCTGACCAGGCATATGCTGTGAATCCATCTGCTCCTTTTAGTGGACTTTCTGAGCTAGCCCTTCAAACAGTTTACAGGTTAAACATGGGGGGTCCTTTGCTCACATCTCAAAATGATACCCTTGGAAGAACTTGGGAGAATGACATGAAGTACCTCCATGTGGACAGTTCTGCAGTGAATGTATCAGTGAACCCTGCAAACATAAAATATCCACAGGCTGTCACACCCGAAATTGCCCCAAACTGGGTCTATGCCACTGCTGAAGCCATGGGAAATGCAAACGTGCCCAATGTGAACTTCAACATAACTTGGGTCTTTACAGTAGATCCAAATTTCATGTATCTTGTTCGGGTACATTTCTGTGATATTGTTAGCAAAGCTCTGAATAGTCTCGTTTTCAATGTTTTCATAAATTCTGACAATGTGCTTGGGAGTCTTGACCTCTCTTCCATTACTGGTGACTTGGGCGTGCCTTATTACAAAGACTTTGTTTCCAACTCCACAGAAGGTGCAGATACTTTGACCGTCAGTGTTGGTCCAGATTCAATGGCTGATACCACCAATGCAATTCTGAATGGGTTGGAGATTATGAAGATCAGCAATGAGTTGGGGAGTTTGGATGGGTCTCAATCCGTGGGGAATTTTCTTCCTAGTTCATCCTCAAAGAAGAATAATATAGGAATCATAGTTGGCTCTGTTGTGGGATCTGTTGCTGTTGTGGCAATTATTGGTTTCCTTTATTGCTGCTTGGCATCCCGCAAGTCGAAGACAACTAACCAAGCGACATGGCTGCCCTTGCCCTTGCATGGAAATTCTCAGACCATGACAAAAATGTCGACAACTTCACAAAAGAGTGGAACAGCTAGCTGCATTTCATTAGCTTCCTCCAATCTTGGCAAATTCTTCATGTTCCAGGAAATCCTGGATGCAACCAACAAGTTTGATGAGAGCCTACTTCTTGGCGTTGGTGGTTTTGGCAGGGTTTACAAGGGAACACTTGAAGATGGGACTAAAGTAGCTGTCAAAAGGGGAAATCCCAGATCCGAACAAGGTCTGGCTGAATTCCGAACTGAGATTGAAATGTTATCCAAGCTCCGCCACCGCCACCTTGTGTCTCTTATTGGCTACTGTGATGAAAGATCAGAAATGATTCTTGTCTATGAGTACATGGCCAATGGACCCCTCAGGAGCCATTTGTATGGAACAGACCTGCCAACGCTCTCATGGAAGCTACGCCTTGAAATTTGCATTGGGGCTGCAAGAGGGCTCCATTATCTCCACACTGGTGCAGCTCAAAGCATAATTCACCGAGATGTGAAGACAACCAACATTCTCTTGGATGAGAACTTTGTAGCCAAAGTTGCTGATTTTGGCCTCTCAAAAGCAGGACCAGCTCTTGATCAGACCCATGTGAGTACAGCTGTTAAGGGTAGTTTCGGTTACCTTGATCCTGAATACTTCCGAAGGCAACAACTCACTGAGAAATCTGATGTGTATTCGTTCGGGGTAGTTCTAATGGAAGTTCTGTGCACAAGACCTGCTTTAAATCCTGTTCTTCCAAGGGAGCAGGTCAACATAGCAGAATGGGCAATGACATGGCAGAAGAAGGGCATGCTAGACCAAATCATGGACCCAAATCTGGCAGGGAAGCTCGAGGAGACATCATCTGCACTCATGGAACCTGACGATAACAGCACAAACCACATACCTGGTATCCAATTAACCCAAGGAGAGCCGTTTGATAACAGTGTGAGCATGATCGATGGGGGACACTCCGGCACAGATGATGACACAGAAGATGCTGCCACAAGTGCTGTGTTTTCTCAGCTTGTTAATCCTCGCGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

804

Amino Acids

87.68

Weight (kDa)

5.56

Isoelectric Point (pI)

34.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	38 - 386	1.4e-28	Malectin-like domain
Pkinase	PF00069	506 - 703	1.3e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	507 - 697	6.6e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54380
fragaria_vesca	FvH4_2g16820 FvH4_2g16820 FvH4_3g20780 FvH4_3g20780 FvH4_3g20780
malus_domestica	MD03G1221300.v1.1 MD11G1238700.v1.1
prunus_persica	Prupe.4G188000_v2.0.a1
pyrus_communis	pycom03g17020 pycom11g21030
rosa_chinensis	RchiOBHm_Chr5g0035071 RchiOBHm_Chr6g0280941
rosa_laevigata	RLG00000013014 RLG00000033592
rosa_multiflora	Rmu_sc0005362.1_g000028 Rmu_sc0023551.1_g000001 Rmu_sc0023552.1_g000001
rosa_roxburghii	Rroxscaffold_1G00045340 Rroxscaffold_7G00187470
rosa_rugosa	Rorug05G0149600 Rorug06G0137100
rosa_samantha	Rh5AG242600 Rh5BG242200 Rh5CG273700 Rh5DG250800 Rh6AG249400 Rh6BG251500 Rh6CG252100 Rh6DG243900
rosa_wichuraiana	Rw5G022160 Rw6G021580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1393
Acc36I	ACCTGC	3 cut(s)	1779, 2107, 2119
AccB7I	CCANNNNNTGG	2 cut(s)	355, 2188
AccI	GTMKAC	1 cut(s)	1397
AccII	CGCG	1 cut(s)	2403
AciI	CCGC	6 cut(s)	114, 316, 1318, 1657, 1663, 2403
AclWI	GGATC	4 cut(s)	881, 1273, 1596, 2003
AcoI	YGGCCR	2 cut(s)	346, 1731
AcsI	RAATTY	9 cut(s)	196, 281, 892, 973, 1201, 1372, 1460, 1622, 1803
AcuI	CTGAAG	1 cut(s)	843
AdeI	CACNNNGTG	1 cut(s)	1672
AfaI	GTAC	7 cut(s)	148, 183, 396, 713, 915, 1727, 1978
AfiI	CCNNNNNNNGG	9 cut(s)	310, 355, 602, 721, 804, 805, 1367, 2188, 2200
AhdI	GACNNNNNGTC	1 cut(s)	311
AhlI	ACTAGT	1 cut(s)	16
AjnI	CCWGG	5 cut(s)	343, 567, 1473, 1482, 2269
AjuI	GAANNNNNNNTTGG	4 cut(s)	842, 874, 1794, 1826
AleI	CACNNNNGTG	1 cut(s)	1845
Alw21I	GWGCWC	1 cut(s)	2093
Alw26I	GTCTC	4 cut(s)	956, 1191, 1680, 2213
Alw44I	GTGCAC	1 cut(s)	2089
AlwI	GGATC	4 cut(s)	881, 1273, 1596, 2003
Ama87I	CYCGRG	2 cut(s)	252, 2213
AoxI	GGCC	4 cut(s)	301, 346, 1731, 1933
ApaLI	GTGCAC	1 cut(s)	2089
ApeKI	GCWGC	7 cut(s)	269, 1305, 1351, 1428, 1817, 1850, 2363
ApoI	RAATTY	9 cut(s)	196, 281, 892, 973, 1201, 1372, 1460, 1622, 1803
AseI	ATTAAT	1 cut(s)	459
Asp700I	GAANNNNTTC	2 cut(s)	407, 1710
AspS9I	GGNCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2191
AsuC2I	CCSGG	1 cut(s)	548
AsuHPI	GGTGA	3 cut(s)	403, 1031, 1859
AsuII	TTCGAA	1 cut(s)	122
AsuNHI	GCTAGC	3 cut(s)	209, 616, 1424
AvaI	CYCGRG	2 cut(s)	252, 2213
AvaII	GGWCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2191
AxyI	CCTNAGG	1 cut(s)	1745
BaeGI	GKGCMC	2 cut(s)	849, 2093
BalI	TGGCCA	2 cut(s)	348, 1733
BanII	GRGCYC	1 cut(s)	1830
BbsI	GAAGAC	2 cut(s)	1334, 1886
Bbv12I	GWGCWC	1 cut(s)	2093
BbvI	GCAGC	7 cut(s)	281, 1292, 1338, 1415, 1804, 1862, 2350
BccI	CCATC	4 cut(s)	595, 1175, 1559, 2318
BceAI	ACGGC	2 cut(s)	102, 2281
BcgI	CGANNNNNNTGC	2 cut(s)	1333, 1367
BciT130I	CCWGG	5 cut(s)	345, 569, 1475, 1484, 2271
BciVI	GTATCC	2 cut(s)	466, 2285
BclI	TGATCA	1 cut(s)	1960
BcnI	CCSGG	1 cut(s)	548
BcoDI	GTCTC	4 cut(s)	956, 1191, 1680, 2213
BcuI	ACTAGT	1 cut(s)	16
BfaI	CTAG	6 cut(s)	17, 210, 617, 1212, 1425, 2177
BfmI	CTRYAG	2 cut(s)	375, 732
BfuAI	ACCTGC	3 cut(s)	1779, 2107, 2119
BfuI	GTATCC	2 cut(s)	466, 2285
BisI	GCNGC	7 cut(s)	270, 1306, 1352, 1429, 1818, 1851, 2364
BlsI	GCNGC	7 cut(s)	271, 1307, 1353, 1430, 1819, 1852, 2365
Bme1390I	CCNGG	6 cut(s)	345, 548, 569, 1475, 1484, 2271
Bme18I	GGWCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2191
BmeRI	GACNNNNNGTC	1 cut(s)	311
BmeT110I	CYCGRG	2 cut(s)	252, 2213
BmgT120I	GGNCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2191
BmiI	GGNNCC	7 cut(s)	314, 654, 1741, 1751, 1829, 2193, 2241
BmrFI	CCNGG	6 cut(s)	345, 548, 569, 1475, 1484, 2271
BmrI	ACTGGG	1 cut(s)	814
BmsI	GCATC	4 cut(s)	541, 1322, 1477, 2350
BmtI	GCTAGC	3 cut(s)	213, 620, 1428
BmuI	ACTGGG	1 cut(s)	814
BpiI	GAAGAC	2 cut(s)	1334, 1886
Bpu14I	TTCGAA	1 cut(s)	122
BpuEI	CTTGAG	1 cut(s)	245
BpuMI	CCSGG	1 cut(s)	548
Bsa29I	ATCGAT	1 cut(s)	2322
BsaI	GGTCTC	1 cut(s)	1191
BsaJI	CCNNGG	7 cut(s)	139, 343, 682, 828, 1194, 2120, 2287
Bsc4I	CCNNNNNNNGG	9 cut(s)	310, 355, 602, 721, 804, 805, 1367, 2188, 2200
Bse1I	ACTGG	3 cut(s)	809, 1021, 1849
Bse21I	CCTNAGG	1 cut(s)	1745
Bse3DI	GCAATG	2 cut(s)	1168, 2157
BseBI	CCWGG	5 cut(s)	345, 569, 1475, 1484, 2271
BseCI	ATCGAT	1 cut(s)	2322
BseDI	CCNNGG	7 cut(s)	139, 343, 682, 828, 1194, 2120, 2287
BseGI	GGATG	7 cut(s)	15, 556, 1186, 1217, 1313, 1492, 1906
BseLI	CCNNNNNNNGG	9 cut(s)	310, 355, 602, 721, 804, 805, 1367, 2188, 2200
BseMI	GCAATG	2 cut(s)	1168, 2157
BseMII	CTCAG	6 cut(s)	603, 1391, 1623, 1759, 2031, 2399
BseNI	ACTGG	3 cut(s)	809, 1021, 1849
BseRI	GAGGAG	1 cut(s)	2231
BseSI	GKGCMC	2 cut(s)	849, 2093
BseXI	GCAGC	7 cut(s)	281, 1292, 1338, 1415, 1804, 1862, 2350
BsgI	GTGCAG	3 cut(s)	1092, 1869, 2214
Bsh1236I	CGCG	1 cut(s)	2403
BshFI	GGCC	4 cut(s)	303, 348, 1733, 1935
BshVI	ATCGAT	1 cut(s)	2322
BsiHKAI	GWGCWC	1 cut(s)	2093
BsiHKCI	CYCGRG	2 cut(s)	252, 2213
BsiSI	CCGG	2 cut(s)	548, 2337
BslFI	GGGAC	2 cut(s)	1582, 2343
BslI	CCNNNNNNNGG	9 cut(s)	310, 355, 602, 721, 804, 805, 1367, 2188, 2200
BsmAI	GTCTC	4 cut(s)	956, 1191, 1680, 2213
BsmFI	GGGAC	2 cut(s)	1582, 2343
BsnI	GGCC	4 cut(s)	303, 348, 1733, 1935
Bso31I	GGTCTC	1 cut(s)	1191
BsoBI	CYCGRG	2 cut(s)	252, 2213
Bsp119I	TTCGAA	1 cut(s)	122
Bsp1286I	GDGCHC	3 cut(s)	849, 1830, 2093
Bsp143I	GATC	8 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2008, 2319
Bsp19I	CCATGG	1 cut(s)	828
BspACI	CCGC	6 cut(s)	114, 316, 1318, 1657, 1663, 2403
BspANI	GGCC	4 cut(s)	303, 348, 1733, 1935
BspCNI	CTCAG	6 cut(s)	604, 1390, 1624, 1758, 2032, 2398
BspDI	ATCGAT	1 cut(s)	2322
BspFNI	CGCG	1 cut(s)	2403
BspHI	TCATGA	1 cut(s)	57
BspLI	GGNNCC	7 cut(s)	314, 654, 1741, 1751, 1829, 2193, 2241
BspMAI	CTGCAG	1 cut(s)	736
BspMI	ACCTGC	3 cut(s)	1779, 2107, 2119
BspOI	GCTAGC	3 cut(s)	213, 620, 1428
BspPI	GGATC	4 cut(s)	881, 1273, 1596, 2003
BspT104I	TTCGAA	1 cut(s)	122
BspTNI	GGTCTC	1 cut(s)	1191
BsrDI	GCAATG	2 cut(s)	1168, 2157
BsrI	ACTGG	3 cut(s)	809, 1021, 1849
BssECI	CCNNGG	7 cut(s)	139, 343, 682, 828, 1194, 2120, 2287
BssMI	GATC	8 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2008, 2319
BssT1I	CCWWGG	5 cut(s)	139, 682, 828, 2120, 2287
Bst2UI	CCWGG	5 cut(s)	345, 569, 1475, 1484, 2271
Bst4CI	ACNGT	7 cut(s)	376, 631, 728, 883, 1087, 1691, 2309
Bst6I	CTCTTC	1 cut(s)	1012
BstBI	TTCGAA	1 cut(s)	122
BstC8I	GCNNGC	5 cut(s)	211, 618, 1031, 1426, 2174
BstDEI	CTNAG	7 cut(s)	202, 612, 1377, 1632, 1745, 2040, 2385
BstDSI	CCRYGG	2 cut(s)	828, 1194
BstEII	GGTNACC	1 cut(s)	2000
BstF5I	GGATG	7 cut(s)	15, 556, 1186, 1217, 1313, 1492, 1906
BstFNI	CGCG	1 cut(s)	2403
BstKTI	GATC	8 cut(s)	889, 1158, 1268, 1604, 1703, 1963, 2011, 2322
BstMAI	GTCTC	4 cut(s)	956, 1191, 1680, 2213
BstMBI	GATC	8 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2008, 2319
BstMWI	GCNNNNNNNGC	6 cut(s)	1280, 1357, 1922, 1952, 2147, 2372
BstNI	CCWGG	5 cut(s)	345, 569, 1475, 1484, 2271
BstNSI	RCATGY	1 cut(s)	2176
BstPI	GGTNACC	1 cut(s)	2000
BstSCI	CCNGG	6 cut(s)	343, 546, 567, 1473, 1482, 2269
BstSFI	CTRYAG	2 cut(s)	375, 732
BstSLI	GKGCMC	2 cut(s)	849, 2093
BstUI	CGCG	1 cut(s)	2403
BstV1I	GCAGC	7 cut(s)	281, 1292, 1338, 1415, 1804, 1862, 2350
BstV2I	GAAGAC	2 cut(s)	1334, 1886
BstX2I	RGATCY	3 cut(s)	886, 1265, 1601
BstXI	CCANNNNNNTGG	2 cut(s)	1760, 2270
BstYI	RGATCY	3 cut(s)	886, 1265, 1601
Bsu15I	ATCGAT	1 cut(s)	2322
Bsu36I	CCTNAGG	1 cut(s)	1745
BsuI	GTATCC	2 cut(s)	466, 2285
BsuRI	GGCC	4 cut(s)	303, 348, 1733, 1935
BsuTUI	ATCGAT	1 cut(s)	2322
BtgI	CCRYGG	2 cut(s)	828, 1194
BtsCI	GGATG	7 cut(s)	15, 556, 1186, 1217, 1313, 1492, 1906
BtsI	GCAGTG	3 cut(s)	554, 741, 816
BtsIMutI	CAGTG	8 cut(s)	554, 741, 753, 816, 1096, 1842, 2037, 2314
BveI	ACCTGC	3 cut(s)	1779, 2107, 2119
Cac8I	GCNNGC	5 cut(s)	211, 618, 1031, 1426, 2174
CciI	TCATGA	1 cut(s)	57
Cfr13I	GGNCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2191
ClaI	ATCGAT	1 cut(s)	2322
CsiI	ACCWGGT	1 cut(s)	2269
Csp6I	GTAC	7 cut(s)	147, 182, 395, 712, 914, 1726, 1977
CviQI	GTAC	7 cut(s)	147, 182, 395, 712, 914, 1726, 1977
DdeI	CTNAG	7 cut(s)	202, 612, 1377, 1632, 1745, 2040, 2385
DpnI	GATC	8 cut(s)	888, 1157, 1267, 1603, 1702, 1962, 2010, 2321
DpnII	GATC	8 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2008, 2319
DraI	TTTAAA	1 cut(s)	2106
DraIII	CACNNNGTG	1 cut(s)	1672
DrdI	GACNNNNNNGTC	1 cut(s)	1393
DriI	GACNNNNNGTC	1 cut(s)	311
DseDI	GACNNNNNNGTC	1 cut(s)	1393
EaeI	YGGCCR	2 cut(s)	346, 1731
Eam1104I	CTCTTC	1 cut(s)	1012
Eam1105I	GACNNNNNGTC	1 cut(s)	311
EarI	CTCTTC	1 cut(s)	1012
EciI	GGCGGA	2 cut(s)	305, 1646
Eco130I	CCWWGG	5 cut(s)	139, 682, 828, 2120, 2287
Eco24I	GRGCYC	1 cut(s)	1830
Eco31I	GGTCTC	1 cut(s)	1191
Eco47I	GGWCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2191
Eco57I	CTGAAG	1 cut(s)	843
Eco81I	CCTNAGG	1 cut(s)	1745
Eco88I	CYCGRG	2 cut(s)	252, 2213
Eco91I	GGTNACC	1 cut(s)	2000
EcoO109I	RGGNCCY	1 cut(s)	653
EcoO65I	GGTNACC	1 cut(s)	2000
EcoRI	GAATTC	1 cut(s)	1622
EcoRII	CCWGG	5 cut(s)	343, 567, 1473, 1482, 2269
EcoT14I	CCWWGG	5 cut(s)	139, 682, 828, 2120, 2287
EcoT38I	GRGCYC	1 cut(s)	1830
ErhI	CCWWGG	5 cut(s)	139, 682, 828, 2120, 2287
FalI	AAGNNNNNCTT	2 cut(s)	2086, 2118
FaqI	GGGAC	2 cut(s)	1582, 2343
FauI	CCCGC	1 cut(s)	1325
FauNDI	CATATG	1 cut(s)	574
FbaI	TGATCA	1 cut(s)	1960
FblI	GTMKAC	1 cut(s)	1397
Fnu4HI	GCNGC	7 cut(s)	270, 1306, 1352, 1429, 1818, 1851, 2364
FokI	GGATG	7 cut(s)	22, 563, 1193, 1204, 1300, 1499, 1913
FriOI	GRGCYC	1 cut(s)	1830
Fsp4HI	GCNGC	7 cut(s)	270, 1306, 1352, 1429, 1818, 1851, 2364
FspBI	CTAG	6 cut(s)	17, 210, 617, 1212, 1425, 2177
GluI	GCNGC	7 cut(s)	270, 1306, 1352, 1429, 1818, 1851, 2364
HaeIII	GGCC	4 cut(s)	303, 348, 1733, 1935
HapII	CCGG	2 cut(s)	548, 2337
HincII	GTYRAC	2 cut(s)	1398, 2134
HindII	GTYRAC	2 cut(s)	1398, 2134
HinfI	GANTC	8 cut(s)	37, 359, 481, 583, 994, 1103, 1242, 1711
HpaII	CCGG	2 cut(s)	548, 2337
HphI	GGTGA	3 cut(s)	403, 1031, 1859
Hpy166II	GTNNAC	9 cut(s)	605, 634, 724, 751, 856, 1398, 1546, 2091, 2134
Hpy8I	GTNNAC	9 cut(s)	605, 634, 724, 751, 856, 1398, 1546, 2091, 2134
HpyAV	CCTTC	8 cut(s)	240, 293, 424, 507, 632, 1061, 2019, 2161
HpyCH4III	ACNGT	7 cut(s)	376, 631, 728, 883, 1087, 1691, 2309
HpyCH4IV	ACGT	1 cut(s)	843
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1280, 1357, 1922, 1952, 2147, 2372
HpyF3I	CTNAG	7 cut(s)	202, 612, 1377, 1632, 1745, 2040, 2385
HpySE526I	ACGT	1 cut(s)	843
Ksp22I	TGATCA	1 cut(s)	1960
Kzo9I	GATC	8 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2008, 2319
LmnI	GCTCC	6 cut(s)	266, 598, 1659, 1749, 1833, 2125
Lsp1109I	GCAGC	7 cut(s)	281, 1292, 1338, 1415, 1804, 1862, 2350
LweI	GCATC	4 cut(s)	541, 1322, 1477, 2350
MabI	ACCWGGT	1 cut(s)	2269
MaeI	CTAG	6 cut(s)	17, 210, 617, 1212, 1425, 2177
MaeII	ACGT	1 cut(s)	843
MaeIII	GTNAC	6 cut(s)	130, 379, 463, 781, 1019, 2000
MalI	GATC	8 cut(s)	888, 1157, 1267, 1603, 1702, 1962, 2010, 2321
MboI	GATC	8 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2008, 2319
MfeI	CAATTG	1 cut(s)	528
MflI	RGATCY	3 cut(s)	886, 1265, 1601
MhlI	GDGCHC	3 cut(s)	849, 1830, 2093
MlsI	TGGCCA	2 cut(s)	348, 1733
MluNI	TGGCCA	2 cut(s)	348, 1733
MlyI	GAGTC	3 cut(s)	368, 475, 1003
MmeI	TCCRAC	2 cut(s)	1080, 1122
Mox20I	TGGCCA	2 cut(s)	348, 1733
MroXI	GAANNNNTTC	2 cut(s)	407, 1710
MscI	TGGCCA	2 cut(s)	348, 1733
MseI	TTAA	9 cut(s)	5, 459, 486, 522, 641, 1986, 2105, 2282, 2394
MslI	CAYNNNNRTG	4 cut(s)	921, 1758, 1845, 1872
Msp20I	TGGCCA	2 cut(s)	348, 1733
MspA1I	CMGCKG	1 cut(s)	1982
MspI	CCGG	2 cut(s)	548, 2337
MspR9I	CCNGG	6 cut(s)	345, 548, 569, 1475, 1484, 2271
MunI	CAATTG	1 cut(s)	528
MvaI	CCWGG	5 cut(s)	345, 569, 1475, 1484, 2271
MvnI	CGCG	1 cut(s)	2403
MwoI	GCNNNNNNNGC	6 cut(s)	1280, 1357, 1922, 1952, 2147, 2372
NciI	CCSGG	1 cut(s)	548
NcoI	CCATGG	1 cut(s)	828
NdeI	CATATG	1 cut(s)	574
NdeII	GATC	8 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2008, 2319
NheI	GCTAGC	3 cut(s)	209, 616, 1424
NlaIV	GGNNCC	7 cut(s)	314, 654, 1741, 1751, 1829, 2193, 2241
NmuCI	GTSAC	3 cut(s)	130, 781, 1019
NspI	RCATGY	1 cut(s)	2176
NspV	TTCGAA	1 cut(s)	122
OliI	CACNNNNGTG	1 cut(s)	1845
PaeI	GCATGC	1 cut(s)	2176
PaeR7I	CTCGAG	2 cut(s)	252, 2213
PagI	TCATGA	1 cut(s)	57
PdmI	GAANNNNTTC	2 cut(s)	407, 1710
PfeI	GAWTC	5 cut(s)	37, 583, 1103, 1242, 1711
PflMI	CCANNNNNTGG	2 cut(s)	355, 2188
PfoI	TCCNGGA	3 cut(s)	546, 1473, 1482
PkrI	GCNGC	7 cut(s)	271, 1307, 1353, 1430, 1819, 1852, 2365
PleI	GAGTC	3 cut(s)	367, 475, 1002
PpsI	GAGTC	3 cut(s)	367, 475, 1002
PpuMI	RGGWCCY	1 cut(s)	653
PshBI	ATTAAT	1 cut(s)	459
Psp5II	RGGWCCY	1 cut(s)	653
Psp6I	CCWGG	5 cut(s)	343, 567, 1473, 1482, 2269
PspEI	GGTNACC	1 cut(s)	2000
PspGI	CCWGG	5 cut(s)	343, 567, 1473, 1482, 2269
PspN4I	GGNNCC	7 cut(s)	314, 654, 1741, 1751, 1829, 2193, 2241
PspPI	GGNCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2191
PspPPI	RGGWCCY	1 cut(s)	653
PspXI	VCTCGAGB	2 cut(s)	252, 2213
PstI	CTGCAG	1 cut(s)	736
PsuI	RGATCY	3 cut(s)	886, 1265, 1601
PvuII	CAGCTG	1 cut(s)	1982
RsaI	GTAC	7 cut(s)	148, 183, 396, 713, 915, 1727, 1978
RsaNI	GTAC	7 cut(s)	147, 182, 395, 712, 914, 1726, 1977
RseI	CAYNNNNRTG	4 cut(s)	921, 1758, 1845, 1872
SalI	GTCGAC	1 cut(s)	1396
SaqAI	TTAA	9 cut(s)	5, 459, 486, 522, 641, 1986, 2105, 2282, 2394
SatI	GCNGC	7 cut(s)	270, 1306, 1352, 1429, 1818, 1851, 2364
Sau3AI	GATC	8 cut(s)	886, 1155, 1265, 1601, 1700, 1960, 2008, 2319
Sau96I	GGNCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2191
SchI	GAGTC	3 cut(s)	368, 475, 1003
ScrFI	CCNGG	6 cut(s)	345, 548, 569, 1475, 1484, 2271
SduI	GDGCHC	3 cut(s)	849, 1830, 2093
SexAI	ACCWGGT	1 cut(s)	2269
SfaNI	GCATC	4 cut(s)	541, 1322, 1477, 2350
SfcI	CTRYAG	2 cut(s)	375, 732
Sfr274I	CTCGAG	2 cut(s)	252, 2213
SfuI	TTCGAA	1 cut(s)	122
SinI	GGWCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2191
SlaI	CTCGAG	2 cut(s)	252, 2213
SmiMI	CAYNNNNRTG	4 cut(s)	921, 1758, 1845, 1872
SmlI	CTYRAG	3 cut(s)	252, 260, 2213
SmoI	CTYRAG	3 cut(s)	252, 260, 2213
SpeI	ACTAGT	1 cut(s)	16
SphI	GCATGC	1 cut(s)	2176
SsiI	CCGC	6 cut(s)	114, 316, 1318, 1657, 1663, 2403
SspMI	CTAG	6 cut(s)	17, 210, 617, 1212, 1425, 2177
StyD4I	CCNGG	6 cut(s)	343, 546, 567, 1473, 1482, 2269
StyI	CCWWGG	5 cut(s)	139, 682, 828, 2120, 2287
TaaI	ACNGT	7 cut(s)	376, 631, 728, 883, 1087, 1691, 2309
TaiI	ACGT	1 cut(s)	846
TaqI	TCGA	7 cut(s)	93, 122, 253, 1325, 1397, 2214, 2322
TatI	WGTACW	4 cut(s)	181, 394, 1725, 1976
TfiI	GAWTC	5 cut(s)	37, 583, 1103, 1242, 1711
Tru1I	TTAA	9 cut(s)	5, 459, 486, 522, 641, 1986, 2105, 2282, 2394
Tru9I	TTAA	9 cut(s)	5, 459, 486, 522, 641, 1986, 2105, 2282, 2394
TscAI	CASTG	8 cut(s)	561, 741, 753, 823, 1096, 1849, 2044, 2314
TseFI	GTSAC	3 cut(s)	130, 781, 1019
TseI	GCWGC	7 cut(s)	269, 1305, 1351, 1428, 1817, 1850, 2363
Tsp45I	GTSAC	3 cut(s)	130, 781, 1019
TspGWI	ACGGA	1 cut(s)	1183
TspRI	CASTG	8 cut(s)	561, 741, 753, 823, 1096, 1849, 2044, 2314
Van91I	CCANNNNNTGG	2 cut(s)	355, 2188
VneI	GTGCAC	1 cut(s)	2089
VpaK11BI	GGWCC	6 cut(s)	313, 653, 1097, 1739, 1949, 2191
VspI	ATTAAT	1 cut(s)	459
XapI	RAATTY	9 cut(s)	196, 281, 892, 973, 1201, 1372, 1460, 1622, 1803
XceI	RCATGY	1 cut(s)	2176
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1782, 1894
XhoI	CTCGAG	2 cut(s)	252, 2213
XmiI	GTMKAC	1 cut(s)	1397
XmnI	GAANNNNTTC	2 cut(s)	407, 1710
XspI	CTAG	6 cut(s)	17, 210, 617, 1212, 1425, 2177

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.