Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0004410

Physical Location & Seq

Genomic Coordinates Reverse (-)

18144479 .. 18146995

Gene Structure 2517 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g17020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2517 bp

ATGAAACTTGTAACTTGGGCAGCTTTGTTTCTTGCTGTTGTTGTGTTCATGAGTTATAGATCATCCGCTTCATTCACTCCTGTCGATAACTACTTAATTGCCTGCGGTTCTCCGAAAAATGTCACATTCCAAGGTCGAACCTTTGTTCCCGATACACAACAATCTTCCCTTGTACTAAAGACTGCAAATTCTTTAGTTGCCAGCCCCAATGCTAATGCCCCTTCTCCAATTTACCAATCTGCTCGAGTTTTCCAGGCAACAGCTTCTTACAAATTCAAAGTCCAGCAAGAAGGCCGGCATTGGGTCCGCCTTTACTTTTTCCCTCTTACAAGCCCTGGCCAAAACTTGGATTCTGCTCAAATGACTGTAGTTACTGAAAATTTTGTACTCTTGAACAACTTCACTTTCAAGAACTATAACGGTTCTTATCTGTTCAAGGAGTATGCAATTAATGTAACTTCGGATACTTTGACTCTTAACTTCATTCCTTCAAACAATTCAGTTGCTTTTGTTAATGCAATTGAAGTAGTTTCTATCCCGGATGCACTGCTCCCTGACCAGGCATATGCTGTGAATCCATCTGCTCCTTTTAGTGGACTTTCTAAGCTTGCCCTTCAAACAGTTTACCGGTTAAACATGGGGGGCCCTTTGCTCACATCTCAAAATGATACCCTTGGAAGAACTTGGGAGAATGACGTGAAGTACCTCCATGTGGACAGTTCTGCAGTGAATGTATCGGTGAACCTTGCAAGCATAAAATATCCGCCTACTGTCACACCTGAAATTGCCCCAAATTGGGTCTATGCCACAGCTGAAGCCATGGGAAATGCAAACGTGCCCAATGTGAACTTCAACATAACTTGGGTCTTTACAGTAGATCCAAATTTTATGTATCTTGTTCGGGTACACTTTTGTGATATTGTCAGCAAAGCTCTGAATAATCTCGTTTTCAATGTTTTCATAAATTCTGACAATGTGCTTGGTAGTCTTGACCTCTCTTCGATTACTGGTGACTTGGGTGTGCCATATTACAAAGACTTCATTTCCAACTCCACAGAAGATGCAGGTACTTTGACTGTCAGTGTTGGTCCAGATTCATCGGCTGATATTACCAATGCAATTCTGAATGGGTTGGAGATTATGAAGATCAGCAGTGAGTTGGGGAGCTTGGACGGGTCTCTATCCGTGGGGAATCTTCTTCCTAGTCCATCCTCAAAGAAGAATAATATAGGAATCATAGTTGGCTCTGTTGTGGGATGTGTTGCTGTTGTGGCAATTATTGGTTTCCTTTATTGCTGCTTGGCATCCCGCAAGTCGAAGACAACTAACCAAGCGACATGGCTGCCCTTGCCCTTGTATGGAAATTCTCAGACCATGACAAAAATGTCTACAACTTCACAAAAGAGTGGAACAGCTAGCTGCATTTCATTAGCCTCCTCCAATCTTGGCAAAATCTTCATGTTCCAGGAAATCCTGGATGCAACCAATAAGTTCGATGAGAGCCTACTTCTTGGGGTTGGTGGTTTTGGCAGGGTTTACAAGGGAACACTTGAAGATGGGACTAGAGTAGCTGTCAAAAGGGGAAACCCCAGATCTGAACAAGGTCTTGCTGAATTCCGAACTGAGATTGAAATGTTATCCAAGCTCCGCCACCGCCACCTTGTGTCTCTTATTGGCTACTGTGATGAAAGGTCAGAAATGATTCTTGTCTATGAATACATGGCCAATGGACCCCTCAGGAGCCATTTGTACGGAACAGACCTGCCAACGCTCTCATGGAAGCTACGCCTTGAAATTTGCATTGGGGCTGCAAGAGGGCTCCATTATCTCCACACTGGTGCAGCTCAAAGCATAATTCACCGAGATGTGAAGACAACAAACATTCTCTTGGATGAGAACTTTGTAGCCAAAGTTGCTGATTTTGGCCTCTCAAAAGCAGGTCCAGCTCTAGATCAGACCCATGTGAGTACAGCTGTTAAGGGTAGTTTCGGTTACCTTGATCCTGAATACTTCCGAAGGCAACAGCTCACGGAGAAATCTGATGTGTATTCGTTCGGGGTAGTTCTAATGGAAGTTCTGTGCACAAGACCAGCTTTAAATCCTGTTCTTCCAAGGGAGCAGGTCAACATAGCAGAGTGGGCGATGACATGGCAGAAGAAGGGCATGCTAGACCAAATCATGGACCCAAATCTGGCAGGGAAGGTAAATCCAGCTTCTCTTAAGAAGTTCGGGGAGACAGCTGAGAAGTGCCTTGCTGAGTATGGTGTTGACAGGCCATCAATGGGAGATGTCTTGTGGAATCTTGAATATGCTCTTCAGCTCGAGGAGACATCATCTGCACTCATGGAACCTGATGATAACAGCACAAACCACATACCTGGTATCCAATTAACCCAAGGAGAGCCATTTGATAACAGTGTGAGCATGATTGATGGGGGACACTCCGGCGCAGATGACACAGAAAATGCTGCCTCAAGTGCTGTGTTTTCTCAGCTTGTTAATCCTCGCGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

839

Amino Acids

91.45

Weight (kDa)

5.59

Isoelectric Point (pI)

35.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	33 - 383	1.6e-31	Malectin-like domain
Pkinase	PF00069	503 - 761	8.7e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	504 - 695	7.3e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54380
fragaria_vesca	FvH4_2g16820 FvH4_2g16820 FvH4_3g20780 FvH4_3g20780 FvH4_3g20780
malus_domestica	MD03G1221300.v1.1 MD11G1238700.v1.1
prunus_persica	Prupe.4G188000_v2.0.a1
pyrus_communis	pycom03g17020 pycom11g21030
rosa_chinensis	RchiOBHm_Chr5g0035071 RchiOBHm_Chr6g0280941
rosa_laevigata	RLG00000013014 RLG00000033592
rosa_multiflora	Rmu_sc0005362.1_g000028 Rmu_sc0023551.1_g000001 Rmu_sc0023552.1_g000001
rosa_roxburghii	Rroxscaffold_1G00045340 Rroxscaffold_7G00187470
rosa_rugosa	Rorug05G0149600 Rorug06G0137100
rosa_samantha	Rh5AG242600 Rh5BG242200 Rh5CG273700 Rh5DG250800 Rh6AG249400 Rh6BG251500 Rh6CG252100 Rh6DG243900
rosa_wichuraiana	Rw5G022160 Rw6G021580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1384
Acc36I	ACCTGC	4 cut(s)	1055, 1770, 1928, 2110
AccB7I	CCANNNNNTGG	2 cut(s)	346, 2179
AccI	GTMKAC	1 cut(s)	1388
AccII	CGCG	1 cut(s)	2508
AciI	CCGC	8 cut(s)	66, 105, 307, 764, 1309, 1648, 1654, 2508
AclWI	GGATC	2 cut(s)	872, 1994
AcoI	YGGCCR	2 cut(s)	337, 1722
AcsI	RAATTY	8 cut(s)	187, 272, 379, 883, 964, 1363, 1613, 1794
AcuI	CTGAAG	2 cut(s)	834, 2300
AdeI	CACNNNGTG	1 cut(s)	1663
AfaI	GTAC	7 cut(s)	174, 387, 704, 906, 1069, 1751, 1969
AflII	CTTAAG	1 cut(s)	2219
AgeI	ACCGGT	1 cut(s)	627
AjiI	CACGTC	1 cut(s)	697
AjnI	CCWGG	6 cut(s)	252, 334, 558, 1464, 1473, 2377
AjuI	GAANNNNNNNTTGG	4 cut(s)	833, 865, 1785, 1817
AleI	CACNNNNGTG	2 cut(s)	912, 1836
AloI	GAACNNNNNNTCC	2 cut(s)	130, 162
Alw21I	GWGCWC	1 cut(s)	2084
Alw26I	GTCTC	4 cut(s)	1182, 1671, 2228, 2321
Alw44I	GTGCAC	1 cut(s)	2080
AlwI	GGATC	2 cut(s)	872, 1994
Ama87I	CYCGRG	2 cut(s)	243, 2321
AoxI	GGCC	6 cut(s)	292, 337, 643, 1722, 1924, 2273
ApaI	GGGCCC	1 cut(s)	647
ApaLI	GTGCAC	1 cut(s)	2080
ApeKI	GCWGC	7 cut(s)	20, 1296, 1342, 1419, 1808, 1841, 2468
ApoI	RAATTY	8 cut(s)	187, 272, 379, 883, 964, 1363, 1613, 1794
ArsI	GACNNNNNNTTYG	2 cut(s)	264, 296
AseI	ATTAAT	1 cut(s)	450
AsiGI	ACCGGT	1 cut(s)	627
Asp700I	GAANNNNTTC	2 cut(s)	398, 1701
AspLEI	GCGC	1 cut(s)	2450
AspS9I	GGNCC	7 cut(s)	304, 643, 644, 1088, 1730, 1940, 2182
AsuC2I	CCSGG	1 cut(s)	539
AsuHPI	GGTGA	3 cut(s)	751, 1022, 1850
AsuNHI	GCTAGC	1 cut(s)	1415
AvaI	CYCGRG	2 cut(s)	243, 2321
AvaII	GGWCC	5 cut(s)	304, 1088, 1730, 1940, 2182
AxyI	CCTNAGG	1 cut(s)	1736
BaeGI	GKGCMC	3 cut(s)	647, 840, 2084
BalI	TGGCCA	2 cut(s)	339, 1724
BanII	GRGCYC	2 cut(s)	647, 1821
BbsI	GAAGAC	2 cut(s)	1325, 1877
Bbv12I	GWGCWC	1 cut(s)	2084
BbvI	GCAGC	7 cut(s)	32, 1283, 1329, 1406, 1795, 1853, 2455
BccI	CCATC	5 cut(s)	586, 1216, 1550, 2284, 2426
BcgI	CGANNNNNNTGC	2 cut(s)	1324, 1358
BciT130I	CCWGG	6 cut(s)	254, 336, 560, 1466, 1475, 2379
BciVI	GTATCC	2 cut(s)	457, 2393
BcnI	CCSGG	1 cut(s)	539
BcoDI	GTCTC	4 cut(s)	1182, 1671, 2228, 2321
BfaI	CTAG	5 cut(s)	1203, 1416, 1563, 1949, 2168
BfmI	CTRYAG	2 cut(s)	366, 723
BfrI	CTTAAG	1 cut(s)	2219
BfuAI	ACCTGC	4 cut(s)	1055, 1770, 1928, 2110
BfuI	GTATCC	2 cut(s)	457, 2393
BglII	AGATCT	1 cut(s)	1592
BisI	GCNGC	7 cut(s)	21, 1297, 1343, 1420, 1809, 1842, 2469
BlsI	GCNGC	7 cut(s)	22, 1298, 1344, 1421, 1810, 1843, 2470
Bme1390I	CCNGG	7 cut(s)	254, 336, 539, 560, 1466, 1475, 2379
Bme18I	GGWCC	5 cut(s)	304, 1088, 1730, 1940, 2182
BmeT110I	CYCGRG	2 cut(s)	243, 2321
BmgBI	CACGTC	1 cut(s)	697
BmgT120I	GGNCC	7 cut(s)	304, 643, 644, 1088, 1730, 1940, 2182
BmiI	GGNNCC	8 cut(s)	305, 644, 645, 1732, 1742, 1820, 2184, 2349
BmrFI	CCNGG	7 cut(s)	254, 336, 539, 560, 1466, 1475, 2379
BmsI	GCATC	4 cut(s)	532, 1051, 1313, 1468
BmtI	GCTAGC	1 cut(s)	1419
BpiI	GAAGAC	2 cut(s)	1325, 1877
BpuEI	CTTGAG	1 cut(s)	2458
BpuMI	CCSGG	1 cut(s)	539
BsaI	GGTCTC	1 cut(s)	1182
BsaJI	CCNNGG	7 cut(s)	130, 334, 673, 819, 1185, 2111, 2395
BsaWI	WCCGGW	1 cut(s)	627
Bse118I	RCCGGY	2 cut(s)	294, 627
Bse1I	ACTGG	2 cut(s)	1012, 1840
Bse21I	CCTNAGG	1 cut(s)	1736
BseBI	CCWGG	6 cut(s)	254, 336, 560, 1466, 1475, 2379
BseDI	CCNNGG	7 cut(s)	130, 334, 673, 819, 1185, 2111, 2395
BseGI	GGATG	7 cut(s)	62, 547, 1208, 1262, 1304, 1483, 1897
BseMII	CTCAG	6 cut(s)	1382, 1614, 1750, 2232, 2247, 2504
BseNI	ACTGG	2 cut(s)	1012, 1840
BseRI	GAGGAG	2 cut(s)	1426, 2339
BseSI	GKGCMC	3 cut(s)	647, 840, 2084
BseXI	GCAGC	7 cut(s)	32, 1283, 1329, 1406, 1795, 1853, 2455
BsgI	GTGCAG	2 cut(s)	1860, 2322
Bsh1236I	CGCG	1 cut(s)	2508
BshFI	GGCC	6 cut(s)	294, 339, 645, 1724, 1926, 2275
BshTI	ACCGGT	1 cut(s)	627
BsiHKAI	GWGCWC	1 cut(s)	2084
BsiHKCI	CYCGRG	2 cut(s)	243, 2321
BsiSI	CCGG	4 cut(s)	295, 539, 628, 2445
BslFI	GGGAC	2 cut(s)	1573, 2451
BsmAI	GTCTC	4 cut(s)	1182, 1671, 2228, 2321
BsmFI	GGGAC	2 cut(s)	1573, 2451
BsnI	GGCC	6 cut(s)	294, 339, 645, 1724, 1926, 2275
Bso31I	GGTCTC	1 cut(s)	1182
BsoBI	CYCGRG	2 cut(s)	243, 2321
Bsp120I	GGGCCC	1 cut(s)	643
Bsp1286I	GDGCHC	4 cut(s)	647, 840, 1821, 2084
Bsp143I	GATC	6 cut(s)	59, 877, 1146, 1592, 1951, 1999
Bsp19I	CCATGG	1 cut(s)	819
BspACI	CCGC	8 cut(s)	66, 105, 307, 764, 1309, 1648, 1654, 2508
BspANI	GGCC	6 cut(s)	294, 339, 645, 1724, 1926, 2275
BspCNI	CTCAG	6 cut(s)	1381, 1615, 1749, 2233, 2248, 2503
BspFNI	CGCG	1 cut(s)	2508
BspHI	TCATGA	1 cut(s)	48
BspLI	GGNNCC	8 cut(s)	305, 644, 645, 1732, 1742, 1820, 2184, 2349
BspMAI	CTGCAG	1 cut(s)	727
BspMI	ACCTGC	4 cut(s)	1055, 1770, 1928, 2110
BspOI	GCTAGC	1 cut(s)	1419
BspPI	GGATC	2 cut(s)	872, 1994
BspQI	GCTCTTC	1 cut(s)	2319
BspTI	CTTAAG	1 cut(s)	2219
BspTNI	GGTCTC	1 cut(s)	1182
BsrFI	RCCGGY	2 cut(s)	294, 627
BsrI	ACTGG	2 cut(s)	1012, 1840
BssAI	RCCGGY	2 cut(s)	294, 627
BssECI	CCNNGG	7 cut(s)	130, 334, 673, 819, 1185, 2111, 2395
BssMI	GATC	6 cut(s)	59, 877, 1146, 1592, 1951, 1999
BssT1I	CCWWGG	5 cut(s)	130, 673, 819, 2111, 2395
Bst2UI	CCWGG	6 cut(s)	254, 336, 560, 1466, 1475, 2379
Bst4CI	ACNGT	9 cut(s)	367, 422, 622, 719, 772, 874, 1078, 1682, 2417
Bst6I	CTCTTC	2 cut(s)	1003, 2319
BstAFI	CTTAAG	1 cut(s)	2219
BstC8I	GCNNGC	7 cut(s)	103, 202, 296, 609, 751, 1417, 2165
BstDEI	CTNAG	7 cut(s)	603, 1368, 1623, 1736, 2241, 2256, 2490
BstDSI	CCRYGG	2 cut(s)	819, 1185
BstEII	GGTNACC	1 cut(s)	1991
BstF5I	GGATG	7 cut(s)	62, 547, 1208, 1262, 1304, 1483, 1897
BstFNI	CGCG	1 cut(s)	2508
BstHHI	GCGC	1 cut(s)	2450
BstKTI	GATC	6 cut(s)	62, 880, 1149, 1595, 1954, 2002
BstMAI	GTCTC	4 cut(s)	1182, 1671, 2228, 2321
BstMBI	GATC	6 cut(s)	59, 877, 1146, 1592, 1951, 1999
BstMWI	GCNNNNNNNGC	6 cut(s)	1271, 1348, 1913, 1943, 2138, 2477
BstNI	CCWGG	6 cut(s)	254, 336, 560, 1466, 1475, 2379
BstNSI	RCATGY	1 cut(s)	2167
BstPI	GGTNACC	1 cut(s)	1991
BstSCI	CCNGG	7 cut(s)	252, 334, 537, 558, 1464, 1473, 2377
BstSFI	CTRYAG	2 cut(s)	366, 723
BstSLI	GKGCMC	3 cut(s)	647, 840, 2084
BstUI	CGCG	1 cut(s)	2508
BstV1I	GCAGC	7 cut(s)	32, 1283, 1329, 1406, 1795, 1853, 2455
BstV2I	GAAGAC	2 cut(s)	1325, 1877
BstX2I	RGATCY	2 cut(s)	877, 1592
BstXI	CCANNNNNNTGG	1 cut(s)	2378
BstYI	RGATCY	2 cut(s)	877, 1592
Bsu36I	CCTNAGG	1 cut(s)	1736
BsuI	GTATCC	2 cut(s)	457, 2393
BsuRI	GGCC	6 cut(s)	294, 339, 645, 1724, 1926, 2275
BtgI	CCRYGG	2 cut(s)	819, 1185
BtgZI	GCGATG	1 cut(s)	2156
BtrI	CACGTC	1 cut(s)	697
BtsCI	GGATG	7 cut(s)	62, 547, 1208, 1262, 1304, 1483, 1897
BtsI	GCAGTG	3 cut(s)	545, 732, 1159
BtsIMutI	CAGTG	6 cut(s)	545, 732, 1087, 1159, 1833, 2422
BveI	ACCTGC	4 cut(s)	1055, 1770, 1928, 2110
Cac8I	GCNNGC	7 cut(s)	103, 202, 296, 609, 751, 1417, 2165
CciI	TCATGA	1 cut(s)	48
CfoI	GCGC	1 cut(s)	2450
Cfr10I	RCCGGY	2 cut(s)	294, 627
Cfr13I	GGNCC	7 cut(s)	304, 643, 644, 1088, 1730, 1940, 2182
CsiI	ACCWGGT	1 cut(s)	2377
Csp6I	GTAC	7 cut(s)	173, 386, 703, 905, 1068, 1750, 1968
CspAI	ACCGGT	1 cut(s)	627
CviQI	GTAC	7 cut(s)	173, 386, 703, 905, 1068, 1750, 1968
DdeI	CTNAG	7 cut(s)	603, 1368, 1623, 1736, 2241, 2256, 2490
DpnI	GATC	6 cut(s)	61, 879, 1148, 1594, 1953, 2001
DpnII	GATC	6 cut(s)	59, 877, 1146, 1592, 1951, 1999
DraI	TTTAAA	1 cut(s)	2097
DraIII	CACNNNGTG	1 cut(s)	1663
DrdI	GACNNNNNNGTC	1 cut(s)	1384
DseDI	GACNNNNNNGTC	1 cut(s)	1384
EaeI	YGGCCR	2 cut(s)	337, 1722
Eam1104I	CTCTTC	2 cut(s)	1003, 2319
EarI	CTCTTC	2 cut(s)	1003, 2319
EciI	GGCGGA	3 cut(s)	296, 753, 1637
Eco130I	CCWWGG	5 cut(s)	130, 673, 819, 2111, 2395
Eco24I	GRGCYC	2 cut(s)	647, 1821
Eco31I	GGTCTC	1 cut(s)	1182
Eco47I	GGWCC	5 cut(s)	304, 1088, 1730, 1940, 2182
Eco57I	CTGAAG	2 cut(s)	834, 2300
Eco81I	CCTNAGG	1 cut(s)	1736
Eco88I	CYCGRG	2 cut(s)	243, 2321
Eco91I	GGTNACC	1 cut(s)	1991
EcoO109I	RGGNCCY	2 cut(s)	643, 644
EcoO65I	GGTNACC	1 cut(s)	1991
EcoRI	GAATTC	1 cut(s)	1613
EcoRII	CCWGG	6 cut(s)	252, 334, 558, 1464, 1473, 2377
EcoT14I	CCWWGG	5 cut(s)	130, 673, 819, 2111, 2395
EcoT38I	GRGCYC	2 cut(s)	647, 1821
ErhI	CCWWGG	5 cut(s)	130, 673, 819, 2111, 2395
FalI	AAGNNNNNCTT	2 cut(s)	2077, 2109
FaqI	GGGAC	2 cut(s)	1573, 2451
FauI	CCCGC	1 cut(s)	1316
FauNDI	CATATG	1 cut(s)	565
FblI	GTMKAC	1 cut(s)	1388
Fnu4HI	GCNGC	7 cut(s)	21, 1297, 1343, 1420, 1809, 1842, 2469
FokI	GGATG	7 cut(s)	49, 554, 1195, 1269, 1291, 1490, 1904
FriOI	GRGCYC	2 cut(s)	647, 1821
Fsp4HI	GCNGC	7 cut(s)	21, 1297, 1343, 1420, 1809, 1842, 2469
FspBI	CTAG	5 cut(s)	1203, 1416, 1563, 1949, 2168
GlaI	GCGC	1 cut(s)	2449
GluI	GCNGC	7 cut(s)	21, 1297, 1343, 1420, 1809, 1842, 2469
HaeIII	GGCC	6 cut(s)	294, 339, 645, 1724, 1926, 2275
HapII	CCGG	4 cut(s)	295, 539, 628, 2445
HhaI	GCGC	1 cut(s)	2450
Hin6I	GCGC	1 cut(s)	2448
HinP1I	GCGC	1 cut(s)	2448
HincII	GTYRAC	2 cut(s)	2125, 2269
HindII	GTYRAC	2 cut(s)	2125, 2269
HindIII	AAGCTT	1 cut(s)	605
HinfI	GANTC	8 cut(s)	350, 472, 574, 1094, 1192, 1233, 1702, 2299
HpaII	CCGG	4 cut(s)	295, 539, 628, 2445
HphI	GGTGA	3 cut(s)	751, 1022, 1850
HpyAV	CCTTC	7 cut(s)	231, 284, 498, 623, 2010, 2152, 2194
HpyCH4III	ACNGT	9 cut(s)	367, 422, 622, 719, 772, 874, 1078, 1682, 2417
HpyCH4IV	ACGT	2 cut(s)	696, 834
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1271, 1348, 1913, 1943, 2138, 2477
HpyF3I	CTNAG	7 cut(s)	603, 1368, 1623, 1736, 2241, 2256, 2490
HpySE526I	ACGT	2 cut(s)	696, 834
HspAI	GCGC	1 cut(s)	2448
KroI	GCCGGC	1 cut(s)	294
KroNI	GCCGGC	1 cut(s)	296
Kzo9I	GATC	6 cut(s)	59, 877, 1146, 1592, 1951, 1999
LguI	GCTCTTC	1 cut(s)	2319
LmnI	GCTCC	7 cut(s)	555, 589, 1164, 1650, 1740, 1824, 2116
Lsp1109I	GCAGC	7 cut(s)	32, 1283, 1329, 1406, 1795, 1853, 2455
LweI	GCATC	4 cut(s)	532, 1051, 1313, 1468
MabI	ACCWGGT	1 cut(s)	2377
MaeI	CTAG	5 cut(s)	1203, 1416, 1563, 1949, 2168
MaeII	ACGT	2 cut(s)	696, 834
MaeIII	GTNAC	7 cut(s)	10, 121, 370, 454, 772, 1010, 1991
MalI	GATC	6 cut(s)	61, 879, 1148, 1594, 1953, 2001
MboI	GATC	6 cut(s)	59, 877, 1146, 1592, 1951, 1999
MfeI	CAATTG	1 cut(s)	519
MflI	RGATCY	2 cut(s)	877, 1592
MhlI	GDGCHC	4 cut(s)	647, 840, 1821, 2084
MlsI	TGGCCA	2 cut(s)	339, 1724
MluNI	TGGCCA	2 cut(s)	339, 1724
MlyI	GAGTC	1 cut(s)	466
MmeI	TCCRAC	2 cut(s)	1071, 1113
Mox20I	TGGCCA	2 cut(s)	339, 1724
MroNI	GCCGGC	1 cut(s)	294
MroXI	GAANNNNTTC	2 cut(s)	398, 1701
MscI	TGGCCA	2 cut(s)	339, 1724
MslI	CAYNNNNRTG	3 cut(s)	912, 1836, 1863
Msp20I	TGGCCA	2 cut(s)	339, 1724
MspA1I	CMGCKG	3 cut(s)	812, 1973, 2240
MspCI	CTTAAG	1 cut(s)	2219
MspI	CCGG	4 cut(s)	295, 539, 628, 2445
MspR9I	CCNGG	7 cut(s)	254, 336, 539, 560, 1466, 1475, 2379
MunI	CAATTG	1 cut(s)	519
MvaI	CCWGG	6 cut(s)	254, 336, 560, 1466, 1475, 2379
MvnI	CGCG	1 cut(s)	2508
MwoI	GCNNNNNNNGC	6 cut(s)	1271, 1348, 1913, 1943, 2138, 2477
NaeI	GCCGGC	1 cut(s)	296
NciI	CCSGG	1 cut(s)	539
NcoI	CCATGG	1 cut(s)	819
NdeI	CATATG	1 cut(s)	565
NdeII	GATC	6 cut(s)	59, 877, 1146, 1592, 1951, 1999
NgoMIV	GCCGGC	1 cut(s)	294
NheI	GCTAGC	1 cut(s)	1415
NlaIV	GGNNCC	8 cut(s)	305, 644, 645, 1732, 1742, 1820, 2184, 2349
NmuCI	GTSAC	3 cut(s)	121, 772, 1010
NspI	RCATGY	1 cut(s)	2167
OliI	CACNNNNGTG	2 cut(s)	912, 1836
PaeI	GCATGC	1 cut(s)	2167
PaeR7I	CTCGAG	2 cut(s)	243, 2321
PagI	TCATGA	1 cut(s)	48
PciSI	GCTCTTC	1 cut(s)	2319
PdiI	GCCGGC	1 cut(s)	296
PdmI	GAANNNNTTC	2 cut(s)	398, 1701
PfeI	GAWTC	7 cut(s)	350, 574, 1094, 1192, 1233, 1702, 2299
PflMI	CCANNNNNTGG	2 cut(s)	346, 2179
PfoI	TCCNGGA	3 cut(s)	537, 1464, 1473
PinAI	ACCGGT	1 cut(s)	627
PkrI	GCNGC	7 cut(s)	22, 1298, 1344, 1421, 1810, 1843, 2470
PleI	GAGTC	1 cut(s)	466
PpsI	GAGTC	1 cut(s)	466
PshBI	ATTAAT	1 cut(s)	450
Psp6I	CCWGG	6 cut(s)	252, 334, 558, 1464, 1473, 2377
PspEI	GGTNACC	1 cut(s)	1991
PspGI	CCWGG	6 cut(s)	252, 334, 558, 1464, 1473, 2377
PspN4I	GGNNCC	8 cut(s)	305, 644, 645, 1732, 1742, 1820, 2184, 2349
PspOMI	GGGCCC	1 cut(s)	643
PspPI	GGNCC	7 cut(s)	304, 643, 644, 1088, 1730, 1940, 2182
PspXI	VCTCGAGB	2 cut(s)	243, 2321
PstI	CTGCAG	1 cut(s)	727
PsuI	RGATCY	2 cut(s)	877, 1592
PvuII	CAGCTG	3 cut(s)	812, 1973, 2240
RsaI	GTAC	7 cut(s)	174, 387, 704, 906, 1069, 1751, 1969
RsaNI	GTAC	7 cut(s)	173, 386, 703, 905, 1068, 1750, 1968
RseI	CAYNNNNRTG	3 cut(s)	912, 1836, 1863
SapI	GCTCTTC	1 cut(s)	2319
SatI	GCNGC	7 cut(s)	21, 1297, 1343, 1420, 1809, 1842, 2469
Sau3AI	GATC	6 cut(s)	59, 877, 1146, 1592, 1951, 1999
Sau96I	GGNCC	7 cut(s)	304, 643, 644, 1088, 1730, 1940, 2182
SchI	GAGTC	1 cut(s)	466
ScrFI	CCNGG	7 cut(s)	254, 336, 539, 560, 1466, 1475, 2379
SduI	GDGCHC	4 cut(s)	647, 840, 1821, 2084
SexAI	ACCWGGT	1 cut(s)	2377
SfaNI	GCATC	4 cut(s)	532, 1051, 1313, 1468
SfcI	CTRYAG	2 cut(s)	366, 723
Sfr274I	CTCGAG	2 cut(s)	243, 2321
SinI	GGWCC	5 cut(s)	304, 1088, 1730, 1940, 2182
SlaI	CTCGAG	2 cut(s)	243, 2321
SmiMI	CAYNNNNRTG	3 cut(s)	912, 1836, 1863
SmlI	CTYRAG	4 cut(s)	243, 2219, 2321, 2473
SmoI	CTYRAG	4 cut(s)	243, 2219, 2321, 2473
SphI	GCATGC	1 cut(s)	2167
SsiI	CCGC	8 cut(s)	66, 105, 307, 764, 1309, 1648, 1654, 2508
SspMI	CTAG	5 cut(s)	1203, 1416, 1563, 1949, 2168
StyD4I	CCNGG	7 cut(s)	252, 334, 537, 558, 1464, 1473, 2377
StyI	CCWWGG	5 cut(s)	130, 673, 819, 2111, 2395
TaaI	ACNGT	9 cut(s)	367, 422, 622, 719, 772, 874, 1078, 1682, 2417
TaiI	ACGT	2 cut(s)	699, 837
TaqI	TCGA	7 cut(s)	84, 136, 244, 1001, 1316, 1494, 2322
TatI	WGTACW	3 cut(s)	172, 385, 1967
TfiI	GAWTC	7 cut(s)	350, 574, 1094, 1192, 1233, 1702, 2299
TscAI	CASTG	6 cut(s)	552, 732, 1087, 1159, 1840, 2422
TseFI	GTSAC	3 cut(s)	121, 772, 1010
TseI	GCWGC	7 cut(s)	20, 1296, 1342, 1419, 1808, 1841, 2468
Tsp45I	GTSAC	3 cut(s)	121, 772, 1010
TspGWI	ACGGA	3 cut(s)	1174, 1767, 2045
TspRI	CASTG	6 cut(s)	552, 732, 1087, 1159, 1840, 2422
Van91I	CCANNNNNTGG	2 cut(s)	346, 2179
Vha464I	CTTAAG	1 cut(s)	2219
VneI	GTGCAC	1 cut(s)	2080
VpaK11BI	GGWCC	5 cut(s)	304, 1088, 1730, 1940, 2182
VspI	ATTAAT	1 cut(s)	450
XapI	RAATTY	8 cut(s)	187, 272, 379, 883, 964, 1363, 1613, 1794
XbaI	TCTAGA	1 cut(s)	1948
XceI	RCATGY	1 cut(s)	2167
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1773
XhoI	CTCGAG	2 cut(s)	243, 2321
XmiI	GTMKAC	1 cut(s)	1388
XmnI	GAANNNNTTC	2 cut(s)	398, 1701
XspI	CTAG	5 cut(s)	1203, 1416, 1563, 1949, 2168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.