FvH4_3g24000

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0013187
Physical Location & Seq
Forward (+)
17069467 .. 17073827
4361 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g24000.t1

Sequence Viewer

Length: 1635 bp
ATGGCGACGACGGCGGAAACAATCACAGCGGCTATGCAACTGATAGAGCCAAAGAAAGAGAAGCTAAAGAAGGCCTTCGACGACCTCCAATCCCGGTCCGACGTCCTCTCTCTCTTCTCTCTCTCCTGGTCCGACCTCGACTCCCATTTCACCTCCCTCCACAACTCCCTCTCGCAAAAACTCCACCTCCTCCAAACCCTCGAGTCCCAATCCCCAAACCCTCAAACCCACACGACCCAACACCCTTCTTCCTCGAATTCACAGACCCAGTTGCCAAAGGTCTCATCTTTAGAACCCAAACCGCCGACCCAGATAGAAAACGACCCGAATTCGTCGACCCGGGTGGAAAAGGATCCGACTTTGCCGACCCGGAACAGTGTTGAGGCGAGTAATAGTGATGATTCCGATGCGGTGGCTCCTCGGCCCGAGTTGGTGGCGTTTTGTGAGAGAATGGATGCAATTGGGTTGAGGAAGTATATGAATGACACCAAAAGTAACCGGAATACGATGCGGTTGGAGCTCATTGGGGCTTTGCGGCGCGCTCCGGACCCGGCATTGATGGTTCTGAATGCAATGGAGGGGTTTTACGTGGAGAATAAAGGGGTTAAGGACGCGGAGGTGAGTGGTGTGAGGAGGACTTGTGTGCTGTTGTTGGAAGTGTTGTGTGGAGTTTCGCCGAATGTGGGAGTGGAGGTGAGGGAGAAGGCCAAGAAGTTGGCAGTGGAGTGGAAAGGGAAGGTTAATTTGGAGGTGGAGAACCAGTTCGAGGCGATGGGGTTCTTGCATTTGGTGGCGGCTTTTGGATTGGTGTCTGAATTCAACATGGATGAGCTTGTGGATCATATGGTCGTGGTTGCGAGGTATAGACAAGCTACTGACTTGTGCCGGACACTTGGCTTGGGGGATAAGATTACAGTTCTGATTCAGAAACTCATGAGCAAGGGCAAACATCTTTTGGCTATCAAGTTCATTTCTGAATTTGATATGACTGATAAGTTTCCACCTGTTCCCATCTTAAAAGCCTACGTGAAGGAGTCTAAAAGGCTGGCTAAGAAAGTTTCTGAGGAAGGAAATAACTCTAAGAAAGCGGCGAATGAGGCCATAGCCAAAGAAACTGGTGCTCTGAAATCAGTAATTAAAATTATAGAAGATTTAAAGCTCGAGTCTGAATATCCACCGTCTTCTCTTGAAAAGCGAATTGACCAATTGGAGAAGAAGAAGGCAAACAGAAAACGCCAGGCAGCAGCTCCTGCTGGGAAGCCTTTCCAACAGCAGCAGCAGCAGCAGTATGGTAACAAGCGTCCTCGAATGATAGCTCCTGTTGGCTCCACAGCAGTCTCAAATGCCGCAGCAGGTTTGTTGGTACAGTCTCCTACTGCATATGTGAGCTCTGCAGCTGCACCCTATGTCGTGTCAGGCACTGCTCCTCCAGTTGCCCCTTATGTGGGTTCATCAACTGGGCAGTATGGTTATGCAGGAGGCCAGATGGGTTTTCCTGGGAACCCAGGCCCTTCTAGTACCCATTTATACTCATCCGAACAGTATGTGCCCTCGGGCTATCCCAACAGGCTAACTGCCTATGGTGGATATAGTGTACCCACTCAATACCATCCATCTTACTATTCTCAGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009791 GO:0010228 GO:0022414 GO:0032501 GO:0032502 GO:0048608 GO:0048731 GO:0048856 GO:0061458
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

545

Amino Acids

59.62

Weight (kDa)

8.96

Isoelectric Point (pI)

45.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 138 - 414 1.4e-100 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013187)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31814 AT5G16320
fragaria_vesca FvH4_3g24000
malus_domestica MD11G1205100.v1.1
prunus_persica Prupe.4G232500_v2.0.a1
pyrus_communis pycom11g17780
rosa_chinensis RchiOBHm_Chr5g0042571
rosa_laevigata RLG00000034141
rosa_multiflora Rmu_sc0004704.1_g000003
rosa_roxburghii Rroxscaffold_1G00038070
rosa_rugosa Rorug05G0202600 Rorug05G0202700 Rorug05G0202800
rosa_samantha Rh5AG287800 Rh5BG292200 Rh5CG324600 Rh5DG302000
rosa_wichuraiana Rw5G026720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 105
Acc36I ACCTGC 1 cut(s) 1343
AccI GTMKAC 1 cut(s) 335
AccII CGCG 2 cut(s) 540, 614
AccIII TCCGGA 1 cut(s) 544
AclWI GGATC 3 cut(s) 347, 360, 846
AcsI RAATTY 4 cut(s) 256, 328, 815, 977
AcyI GRCGYC 1 cut(s) 102
AfaI GTAC 3 cut(s) 1365, 1519, 1596
AfiI CCNNNNNNNGG 4 cut(s) 683, 766, 1444, 1445
AgsI TTSAA 2 cut(s) 820, 1190
AjnI CCWGG 4 cut(s) 125, 1236, 1495, 1504
AjuI GAANNNNNNNTTGG 2 cut(s) 728, 760
AloI GAACNNNNNNTCC 2 cut(s) 746, 778
AluBI AGCT 9 cut(s) 64, 520, 832, 872, 1159, 1247, 1316, 1389, 1397
AluI AGCT 9 cut(s) 64, 520, 832, 872, 1159, 1247, 1316, 1389, 1397
Alw21I GWGCWC 3 cut(s) 522, 1123, 1391
Alw26I GTCTC 3 cut(s) 286, 1342, 1374
AlwI GGATC 3 cut(s) 347, 360, 846
AlwNI CAGNNNCTG 2 cut(s) 1250, 1421
Ama87I CYCGRG 5 cut(s) 200, 339, 425, 1160, 1552
Aor13HI TCCGGA 1 cut(s) 544
AoxI GGCC 6 cut(s) 72, 422, 705, 1098, 1480, 1507
ApeKI GCWGC 9 cut(s) 1241, 1244, 1273, 1276, 1279, 1282, 1349, 1394, 1397
ApoI RAATTY 4 cut(s) 256, 328, 815, 977
Asp700I GAANNNNTTC 3 cut(s) 74, 761, 1262
AspLEI GCGC 2 cut(s) 540, 542
AspS9I GGNCC 5 cut(s) 96, 129, 423, 547, 1508
AsuC2I CCSGG 5 cut(s) 94, 340, 341, 370, 551
AsuHPI GGTGA 3 cut(s) 142, 631, 706
AvaI CYCGRG 5 cut(s) 200, 339, 425, 1160, 1552
AvaII GGWCC 3 cut(s) 96, 129, 547
BaeGI GKGCMC 1 cut(s) 1551
BamHI GGATCC 1 cut(s) 352
BanII GRGCYC 2 cut(s) 522, 1391
BbsI GAAGAC 1 cut(s) 1173
Bbv12I GWGCWC 3 cut(s) 522, 1123, 1391
BbvI GCAGC 9 cut(s) 1253, 1256, 1285, 1288, 1291, 1294, 1361, 1384, 1406
BccI CCATC 6 cut(s) 553, 766, 1019, 1480, 1617, 1621
BceAI ACGGC 1 cut(s) 27
BciT130I CCWGG 4 cut(s) 127, 1238, 1497, 1506
BcnI CCSGG 5 cut(s) 94, 340, 341, 370, 551
BcoDI GTCTC 3 cut(s) 286, 1342, 1374
BfaI CTAG 1 cut(s) 1515
BfmI CTRYAG 1 cut(s) 1392
BfuAI ACCTGC 1 cut(s) 1343
Bme1390I CCNGG 9 cut(s) 94, 127, 340, 341, 370, 551, 1238, 1497, 1506
Bme18I GGWCC 3 cut(s) 96, 129, 547
BmeT110I CYCGRG 5 cut(s) 200, 339, 425, 1160, 1552
BmgT120I GGNCC 5 cut(s) 96, 129, 423, 547, 1508
BmiI GGNNCC 5 cut(s) 354, 417, 549, 1327, 1502
BmrFI CCNGG 9 cut(s) 94, 127, 340, 341, 370, 551, 1238, 1497, 1506
BmrI ACTGGG 2 cut(s) 262, 1467
BmsI GCATC 3 cut(s) 397, 445, 498
BmuI ACTGGG 2 cut(s) 262, 1467
BpiI GAAGAC 1 cut(s) 1173
BpmI CTGGAG 1 cut(s) 1413
BpuMI CCSGG 5 cut(s) 94, 340, 341, 370, 551
BsaAI YACGTR 2 cut(s) 589, 1027
BsaHI GRCGYC 1 cut(s) 102
BsaI GGTCTC 1 cut(s) 286
BsaJI CCNNGG 5 cut(s) 339, 419, 1496, 1504, 1551
BsaWI WCCGGW 2 cut(s) 498, 544
Bsc4I CCNNNNNNNGG 4 cut(s) 683, 766, 1444, 1445
Bse1I ACTGG 5 cut(s) 268, 760, 1120, 1430, 1462
Bse3DI GCAATG 1 cut(s) 579
BseAI TCCGGA 1 cut(s) 544
BseBI CCWGG 4 cut(s) 127, 1238, 1497, 1506
BseDI CCNNGG 5 cut(s) 339, 419, 1496, 1504, 1551
BseGI GGATG 4 cut(s) 460, 832, 1532, 1609
BseLI CCNNNNNNNGG 4 cut(s) 683, 766, 1444, 1445
BseMI GCAATG 1 cut(s) 579
BseMII CTCAG 1 cut(s) 1053
BseNI ACTGG 5 cut(s) 268, 760, 1120, 1430, 1462
BsePI GCGCGC 1 cut(s) 538
BseRI GAGGAG 4 cut(s) 179, 408, 646, 1416
BseSI GKGCMC 1 cut(s) 1551
BseXI GCAGC 9 cut(s) 1253, 1256, 1285, 1288, 1291, 1294, 1361, 1384, 1406
BseYI CCCAGC 1 cut(s) 1253
BsgI GTGCAG 1 cut(s) 1383
Bsh1236I CGCG 2 cut(s) 540, 614
BshFI GGCC 6 cut(s) 74, 424, 707, 1100, 1482, 1509
BsiHKAI GWGCWC 3 cut(s) 522, 1123, 1391
BsiHKCI CYCGRG 5 cut(s) 200, 339, 425, 1160, 1552
BsiSI CCGG 7 cut(s) 94, 340, 370, 499, 545, 551, 886
BslFI GGGAC 1 cut(s) 190
BslI CCNNNNNNNGG 4 cut(s) 683, 766, 1444, 1445
BsmAI GTCTC 3 cut(s) 286, 1342, 1374
BsmFI GGGAC 1 cut(s) 190
BsmI GAATGC 1 cut(s) 574
BsnI GGCC 6 cut(s) 74, 424, 707, 1100, 1482, 1509
Bso31I GGTCTC 1 cut(s) 286
BsoBI CYCGRG 5 cut(s) 200, 339, 425, 1160, 1552
Bsp1286I GDGCHC 4 cut(s) 522, 1123, 1391, 1551
Bsp13I TCCGGA 1 cut(s) 544
Bsp143I GATC 2 cut(s) 352, 838
BspANI GGCC 6 cut(s) 74, 424, 707, 1100, 1482, 1509
BspCNI CTCAG 1 cut(s) 1054
BspEI TCCGGA 1 cut(s) 544
BspFNI CGCG 2 cut(s) 540, 614
BspHI TCATGA 1 cut(s) 933
BspLI GGNNCC 5 cut(s) 354, 417, 549, 1327, 1502
BspMAI CTGCAG 1 cut(s) 1396
BspMI ACCTGC 1 cut(s) 1343
BspPI GGATC 3 cut(s) 347, 360, 846
BspTNI GGTCTC 1 cut(s) 286
BsrDI GCAATG 1 cut(s) 579
BsrI ACTGG 5 cut(s) 268, 760, 1120, 1430, 1462
BssECI CCNNGG 5 cut(s) 339, 419, 1496, 1504, 1551
BssHII GCGCGC 1 cut(s) 538
BssMI GATC 2 cut(s) 352, 838
BssNI GRCGYC 1 cut(s) 102
Bst2UI CCWGG 4 cut(s) 127, 1238, 1497, 1506
Bst4CI ACNGT 5 cut(s) 377, 916, 1179, 1368, 1542
Bst6I CTCTTC 1 cut(s) 119
BstACI GRCGYC 1 cut(s) 102
BstAPI GCANNNNNTGC 1 cut(s) 1250
BstBAI YACGTR 2 cut(s) 589, 1027
BstC8I GCNNGC 2 cut(s) 540, 1047
BstDEI CTNAG 4 cut(s) 1050, 1062, 1080, 1626
BstF5I GGATG 4 cut(s) 460, 832, 1532, 1609
BstFNI CGCG 2 cut(s) 540, 614
BstHHI GCGC 2 cut(s) 540, 542
BstKTI GATC 2 cut(s) 355, 841
BstMAI GTCTC 3 cut(s) 286, 1342, 1374
BstMBI GATC 2 cut(s) 352, 838
BstMWI GCNNNNNNNGC 6 cut(s) 11, 517, 1097, 1250, 1279, 1282
BstNI CCWGG 4 cut(s) 127, 1238, 1497, 1506
BstSCI CCNGG 9 cut(s) 92, 125, 338, 339, 368, 549, 1236, 1495, 1504
BstSFI CTRYAG 1 cut(s) 1392
BstSLI GKGCMC 1 cut(s) 1551
BstUI CGCG 2 cut(s) 540, 614
BstV1I GCAGC 9 cut(s) 1253, 1256, 1285, 1288, 1291, 1294, 1361, 1384, 1406
BstV2I GAAGAC 1 cut(s) 1173
BstX2I RGATCY 1 cut(s) 352
BstXI CCANNNNNNTGG 1 cut(s) 715
BstYI RGATCY 1 cut(s) 352
BsuRI GGCC 6 cut(s) 74, 424, 707, 1100, 1482, 1509
BtgZI GCGATG 1 cut(s) 785
BtsCI GGATG 4 cut(s) 460, 832, 1532, 1609
BtsI GCAGTG 2 cut(s) 726, 1419
BtsIMutI CAGTG 3 cut(s) 382, 726, 1419
BveI ACCTGC 1 cut(s) 1343
Cac8I GCNNGC 2 cut(s) 540, 1047
CaiI CAGNNNCTG 2 cut(s) 1250, 1421
CciI TCATGA 1 cut(s) 933
CfoI GCGC 2 cut(s) 540, 542
Cfr13I GGNCC 5 cut(s) 96, 129, 423, 547, 1508
Cfr9I CCCGGG 1 cut(s) 339
CpoI CGGWCCG 1 cut(s) 96
CseI GACGC 2 cut(s) 620, 1289
Csp6I GTAC 3 cut(s) 1364, 1518, 1595
CspI CGGWCCG 1 cut(s) 96
CviAII CATG 2 cut(s) 823, 934
CviQI GTAC 3 cut(s) 1364, 1518, 1595
DdeI CTNAG 4 cut(s) 1050, 1062, 1080, 1626
DpnI GATC 2 cut(s) 354, 840
DpnII GATC 2 cut(s) 352, 838
DraI TTTAAA 1 cut(s) 1155
Eam1104I CTCTTC 1 cut(s) 119
EarI CTCTTC 1 cut(s) 119
EciI GGCGGA 1 cut(s) 29
Ecl136II GAGCTC 2 cut(s) 520, 1389
Eco147I AGGCCT 1 cut(s) 74
Eco24I GRGCYC 2 cut(s) 522, 1391
Eco31I GGTCTC 1 cut(s) 286
Eco47I GGWCC 3 cut(s) 96, 129, 547
Eco53kI GAGCTC 2 cut(s) 520, 1389
Eco88I CYCGRG 5 cut(s) 200, 339, 425, 1160, 1552
EcoICRI GAGCTC 2 cut(s) 520, 1389
EcoO109I RGGNCCY 1 cut(s) 1508
EcoRI GAATTC 3 cut(s) 256, 328, 815
EcoRII CCWGG 4 cut(s) 125, 1236, 1495, 1504
EcoT38I GRGCYC 2 cut(s) 522, 1391
FaeI CATG 2 cut(s) 826, 937
FalI AAGNNNNNCTT 2 cut(s) 59, 91
FaqI GGGAC 1 cut(s) 190
FatI CATG 2 cut(s) 822, 933
FauNDI CATATG 2 cut(s) 843, 1381
FblI GTMKAC 1 cut(s) 335
FokI GGATG 4 cut(s) 467, 839, 1519, 1596
FriOI GRGCYC 2 cut(s) 522, 1391
FspBI CTAG 1 cut(s) 1515
GlaI GCGC 2 cut(s) 539, 541
GsaI CCCAGC 1 cut(s) 1257
GsuI CTGGAG 1 cut(s) 1413
HaeIII GGCC 6 cut(s) 74, 424, 707, 1100, 1482, 1509
HapII CCGG 7 cut(s) 94, 340, 370, 499, 545, 551, 886
HgaI GACGC 2 cut(s) 620, 1289
HhaI GCGC 2 cut(s) 540, 542
Hin1I GRCGYC 1 cut(s) 102
Hin1II CATG 2 cut(s) 826, 937
Hin6I GCGC 2 cut(s) 538, 540
HinP1I GCGC 2 cut(s) 538, 540
HincII GTYRAC 1 cut(s) 336
HindII GTYRAC 1 cut(s) 336
HinfI GANTC 6 cut(s) 140, 203, 401, 922, 1034, 1163
HpaII CCGG 7 cut(s) 94, 340, 370, 499, 545, 551, 886
HphI GGTGA 3 cut(s) 142, 631, 706
Hpy166II GTNNAC 2 cut(s) 336, 1595
Hpy188III TCNNGA 3 cut(s) 545, 934, 1187
Hpy8I GTNNAC 2 cut(s) 336, 1595
Hpy99I CGWCG 5 cut(s) 10, 13, 83, 104, 337
HpyAV CCTTC 9 cut(s) 64, 85, 255, 697, 730, 1024, 1061, 1213, 1521
HpyCH4III ACNGT 5 cut(s) 377, 916, 1179, 1368, 1542
HpyCH4IV ACGT 3 cut(s) 102, 588, 1026
HpyCH4V TGCA 8 cut(s) 37, 458, 572, 784, 1379, 1394, 1400, 1475
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 517, 1097, 1250, 1279, 1282
HpyF3I CTNAG 4 cut(s) 1050, 1062, 1080, 1626
HpySE526I ACGT 3 cut(s) 102, 588, 1026
Hsp92I GRCGYC 1 cut(s) 102
Hsp92II CATG 2 cut(s) 826, 937
HspAI GCGC 2 cut(s) 538, 540
Kpn2I TCCGGA 1 cut(s) 544
Kzo9I GATC 2 cut(s) 352, 838
LmnI GCTCC 7 cut(s) 421, 517, 547, 1252, 1321, 1331, 1429
Lsp1109I GCAGC 9 cut(s) 1253, 1256, 1285, 1288, 1291, 1294, 1361, 1384, 1406
LweI GCATC 3 cut(s) 397, 445, 498
MaeI CTAG 1 cut(s) 1515
MaeII ACGT 3 cut(s) 102, 588, 1026
MaeIII GTNAC 2 cut(s) 494, 1292
MalI GATC 2 cut(s) 354, 840
MboI GATC 2 cut(s) 352, 838
MboII GAAGA 6 cut(s) 106, 240, 1160, 1173, 1225, 1228
MfeI CAATTG 2 cut(s) 459, 1205
MflI RGATCY 1 cut(s) 352
MhlI GDGCHC 4 cut(s) 522, 1123, 1391, 1551
MlyI GAGTC 4 cut(s) 134, 212, 1043, 1172
MmeI TCCRAC 6 cut(s) 123, 156, 380, 495, 633, 1291
MroI TCCGGA 1 cut(s) 544
MroXI GAANNNNTTC 3 cut(s) 74, 761, 1262
MseI TTAA 5 cut(s) 606, 741, 1016, 1137, 1154
MspA1I CMGCKG 2 cut(s) 29, 1397
MspI CCGG 7 cut(s) 94, 340, 370, 499, 545, 551, 886
MspR9I CCNGG 9 cut(s) 94, 127, 340, 341, 370, 551, 1238, 1497, 1506
MunI CAATTG 2 cut(s) 459, 1205
Mva1269I GAATGC 1 cut(s) 574
MvaI CCWGG 4 cut(s) 127, 1238, 1497, 1506
MvnI CGCG 2 cut(s) 540, 614
MwoI GCNNNNNNNGC 6 cut(s) 11, 517, 1097, 1250, 1279, 1282
NciI CCSGG 5 cut(s) 94, 340, 341, 370, 551
NdeI CATATG 2 cut(s) 843, 1381
NdeII GATC 2 cut(s) 352, 838
NlaIII CATG 2 cut(s) 826, 937
NlaIV GGNNCC 5 cut(s) 354, 417, 549, 1327, 1502
NmeAIII GCCGAG 1 cut(s) 400
PaeR7I CTCGAG 2 cut(s) 200, 1160
PagI TCATGA 1 cut(s) 933
PauI GCGCGC 1 cut(s) 538
PceI AGGCCT 1 cut(s) 74
PctI GAATGC 1 cut(s) 574
PdmI GAANNNNTTC 3 cut(s) 74, 761, 1262
PfeI GAWTC 2 cut(s) 401, 922
PleI GAGTC 4 cut(s) 134, 211, 1042, 1171
PpsI GAGTC 4 cut(s) 134, 211, 1042, 1171
Ppu21I YACGTR 2 cut(s) 589, 1027
Psp124BI GAGCTC 2 cut(s) 522, 1391
Psp6I CCWGG 4 cut(s) 125, 1236, 1495, 1504
PspFI CCCAGC 1 cut(s) 1253
PspGI CCWGG 4 cut(s) 125, 1236, 1495, 1504
PspN4I GGNNCC 5 cut(s) 354, 417, 549, 1327, 1502
PspPI GGNCC 5 cut(s) 96, 129, 423, 547, 1508
PspXI VCTCGAGB 2 cut(s) 200, 1160
PstI CTGCAG 1 cut(s) 1396
PstNI CAGNNNCTG 2 cut(s) 1250, 1421
PsuI RGATCY 1 cut(s) 352
PteI GCGCGC 1 cut(s) 538
PvuII CAGCTG 1 cut(s) 1397
RsaI GTAC 3 cut(s) 1365, 1519, 1596
RsaNI GTAC 3 cut(s) 1364, 1518, 1595
Rsr2I CGGWCCG 1 cut(s) 96
RsrII CGGWCCG 1 cut(s) 96
SacI GAGCTC 2 cut(s) 522, 1391
SalI GTCGAC 1 cut(s) 334
SaqAI TTAA 5 cut(s) 606, 741, 1016, 1137, 1154
Sau3AI GATC 2 cut(s) 352, 838
Sau96I GGNCC 5 cut(s) 96, 129, 423, 547, 1508
SchI GAGTC 4 cut(s) 134, 212, 1043, 1172
ScrFI CCNGG 9 cut(s) 94, 127, 340, 341, 370, 551, 1238, 1497, 1506
SduI GDGCHC 4 cut(s) 522, 1123, 1391, 1551
SfaNI GCATC 3 cut(s) 397, 445, 498
SfcI CTRYAG 1 cut(s) 1392
Sfr274I CTCGAG 2 cut(s) 200, 1160
SinI GGWCC 3 cut(s) 96, 129, 547
SlaI CTCGAG 2 cut(s) 200, 1160
SmaI CCCGGG 1 cut(s) 341
SmlI CTYRAG 2 cut(s) 200, 1160
SmoI CTYRAG 2 cut(s) 200, 1160
SseBI AGGCCT 1 cut(s) 74
SspMI CTAG 1 cut(s) 1515
SstI GAGCTC 2 cut(s) 522, 1391
StuI AGGCCT 1 cut(s) 74
StyD4I CCNGG 9 cut(s) 92, 125, 338, 339, 368, 549, 1236, 1495, 1504
TaaI ACNGT 5 cut(s) 377, 916, 1179, 1368, 1542
TaiI ACGT 3 cut(s) 105, 591, 1029
TaqI TCGA 8 cut(s) 78, 138, 201, 254, 335, 765, 1161, 1306
TauI GCSGC 5 cut(s) 32, 538, 797, 1091, 1349
TfiI GAWTC 2 cut(s) 401, 922
Tru1I TTAA 5 cut(s) 606, 741, 1016, 1137, 1154
Tru9I TTAA 5 cut(s) 606, 741, 1016, 1137, 1154
TscAI CASTG 3 cut(s) 382, 726, 1426
TseI GCWGC 9 cut(s) 1241, 1244, 1273, 1276, 1279, 1282, 1349, 1394, 1397
TspDTI ATGAA 3 cut(s) 494, 958, 1440
TspMI CCCGGG 1 cut(s) 339
TspRI CASTG 3 cut(s) 382, 726, 1426
VpaK11BI GGWCC 3 cut(s) 96, 129, 547
XapI RAATTY 4 cut(s) 256, 328, 815, 977
XhoI CTCGAG 2 cut(s) 200, 1160
XmaI CCCGGG 1 cut(s) 339
XmiI GTMKAC 1 cut(s) 335
XmnI GAANNNNTTC 3 cut(s) 74, 761, 1262
XspI CTAG 1 cut(s) 1515
ZraI GACGTC 1 cut(s) 103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.