Belongs to the Frigida family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G31814 AT5G16320 |
| fragaria_vesca | FvH4_3g24000 |
| malus_domestica | MD11G1205100.v1.1 |
| prunus_persica | Prupe.4G232500_v2.0.a1 |
| pyrus_communis | pycom11g17780 |
| rosa_chinensis | RchiOBHm_Chr5g0042571 |
| rosa_laevigata | RLG00000034141 |
| rosa_multiflora | Rmu_sc0004704.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00038070 |
| rosa_rugosa | Rorug05G0202600 Rorug05G0202700 Rorug05G0202800 |
| rosa_samantha | Rh5AG287800 Rh5BG292200 Rh5CG324600 Rh5DG302000 |
| rosa_wichuraiana | Rw5G026720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 422 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 590 |
| Acc36I | ACCTGC | 1 cut(s) | 422 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 195 |
| AclI | AACGTT | 1 cut(s) | 854 |
| AclWI | GGATC | 7 cut(s) | 664, 674, 812, 825, 1162, 1164, 1175 |
| AcsI | RAATTY | 3 cut(s) | 640, 691, 844 |
| AcuI | CTGAAG | 1 cut(s) | 525 |
| AfaI | GTAC | 3 cut(s) | 219, 288, 633 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 195, 542, 543, 634 |
| AluBI | AGCT | 3 cut(s) | 76, 613, 793 |
| AluI | AGCT | 3 cut(s) | 76, 613, 793 |
| Alw26I | GTCTC | 3 cut(s) | 17, 570, 706 |
| AlwI | GGATC | 7 cut(s) | 664, 674, 812, 825, 1162, 1164, 1175 |
| Ama87I | CYCGRG | 1 cut(s) | 450 |
| AoxI | GGCC | 1 cut(s) | 210 |
| ApeKI | GCWGC | 2 cut(s) | 624, 765 |
| ApoI | RAATTY | 3 cut(s) | 640, 691, 844 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 166, 198 |
| AseI | ATTAAT | 1 cut(s) | 780 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 801 |
| AspLEI | GCGC | 1 cut(s) | 709 |
| AspS9I | GGNCC | 2 cut(s) | 210, 969 |
| AsuC2I | CCSGG | 1 cut(s) | 251 |
| AsuHPI | GGTGA | 5 cut(s) | 16, 32, 437, 446, 1089 |
| AsuII | TTCGAA | 1 cut(s) | 316 |
| AvaI | CYCGRG | 1 cut(s) | 450 |
| AvaII | GGWCC | 1 cut(s) | 969 |
| BamHI | GGATCC | 2 cut(s) | 817, 1167 |
| BbsI | GAAGAC | 2 cut(s) | 504, 725 |
| BbvI | GCAGC | 2 cut(s) | 611, 752 |
| BccI | CCATC | 5 cut(s) | 189, 333, 490, 594, 1246 |
| BclI | TGATCA | 2 cut(s) | 442, 1318 |
| BcnI | CCSGG | 1 cut(s) | 251 |
| BcoDI | GTCTC | 3 cut(s) | 17, 570, 706 |
| BfaI | CTAG | 4 cut(s) | 960, 966, 1188, 1444 |
| BfmI | CTRYAG | 4 cut(s) | 329, 417, 825, 903 |
| BfuAI | ACCTGC | 1 cut(s) | 422 |
| BglII | AGATCT | 1 cut(s) | 36 |
| BisI | GCNGC | 2 cut(s) | 625, 766 |
| BlsI | GCNGC | 2 cut(s) | 626, 767 |
| Bme1390I | CCNGG | 1 cut(s) | 251 |
| Bme18I | GGWCC | 1 cut(s) | 969 |
| BmeT110I | CYCGRG | 1 cut(s) | 450 |
| BmgT120I | GGNCC | 2 cut(s) | 210, 969 |
| BmiI | GGNNCC | 2 cut(s) | 819, 1169 |
| BmrFI | CCNGG | 1 cut(s) | 251 |
| BmrI | ACTGGG | 2 cut(s) | 216, 1075 |
| BmsI | GCATC | 2 cut(s) | 109, 154 |
| BmuI | ACTGGG | 2 cut(s) | 216, 1075 |
| BpiI | GAAGAC | 2 cut(s) | 504, 725 |
| Bpu14I | TTCGAA | 1 cut(s) | 316 |
| BpuEI | CTTGAG | 3 cut(s) | 545, 1073, 1193 |
| BpuMI | CCSGG | 1 cut(s) | 251 |
| BsaBI | GATNNNNATC | 1 cut(s) | 441 |
| BsaJI | CCNNGG | 3 cut(s) | 449, 931, 1152 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 517, 547, 730, 760 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 195, 542, 543, 634 |
| Bse1I | ACTGG | 4 cut(s) | 222, 590, 639, 1070 |
| Bse8I | GATNNNNATC | 1 cut(s) | 441 |
| BseDI | CCNNGG | 3 cut(s) | 449, 931, 1152 |
| BseGI | GGATG | 3 cut(s) | 135, 586, 1261 |
| BseJI | GATNNNNATC | 1 cut(s) | 441 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 195, 542, 543, 634 |
| BseMII | CTCAG | 3 cut(s) | 47, 459, 1416 |
| BseNI | ACTGG | 4 cut(s) | 222, 590, 639, 1070 |
| BseXI | GCAGC | 2 cut(s) | 611, 752 |
| BsgI | GTGCAG | 1 cut(s) | 596 |
| BshFI | GGCC | 1 cut(s) | 212 |
| BsiHKCI | CYCGRG | 1 cut(s) | 450 |
| BsiSI | CCGG | 1 cut(s) | 251 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 195, 542, 543, 634 |
| BsmAI | GTCTC | 3 cut(s) | 17, 570, 706 |
| BsmI | GAATGC | 2 cut(s) | 672, 1139 |
| BsnI | GGCC | 1 cut(s) | 212 |
| BsoBI | CYCGRG | 1 cut(s) | 450 |
| Bsp119I | TTCGAA | 1 cut(s) | 316 |
| BspANI | GGCC | 1 cut(s) | 212 |
| BspCNI | CTCAG | 3 cut(s) | 46, 460, 1415 |
| BspLI | GGNNCC | 2 cut(s) | 819, 1169 |
| BspMAI | CTGCAG | 2 cut(s) | 333, 907 |
| BspMI | ACCTGC | 1 cut(s) | 422 |
| BspPI | GGATC | 7 cut(s) | 664, 674, 812, 825, 1162, 1164, 1175 |
| BspQI | GCTCTTC | 1 cut(s) | 948 |
| BspT104I | TTCGAA | 1 cut(s) | 316 |
| BsrI | ACTGG | 4 cut(s) | 222, 590, 639, 1070 |
| BssECI | CCNNGG | 3 cut(s) | 449, 931, 1152 |
| Bst4CI | ACNGT | 3 cut(s) | 28, 257, 1179 |
| Bst6I | CTCTTC | 3 cut(s) | 296, 948, 1332 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1424 |
| BstBI | TTCGAA | 1 cut(s) | 316 |
| BstDEI | CTNAG | 3 cut(s) | 33, 468, 1402 |
| BstDSI | CCRYGG | 1 cut(s) | 931 |
| BstF5I | GGATG | 3 cut(s) | 135, 586, 1261 |
| BstHHI | GCGC | 1 cut(s) | 709 |
| BstMAI | GTCTC | 3 cut(s) | 17, 570, 706 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1424 |
| BstNSI | RCATGY | 1 cut(s) | 486 |
| BstSCI | CCNGG | 1 cut(s) | 249 |
| BstSFI | CTRYAG | 4 cut(s) | 329, 417, 825, 903 |
| BstV1I | GCAGC | 2 cut(s) | 611, 752 |
| BstV2I | GAAGAC | 2 cut(s) | 504, 725 |
| BstX2I | RGATCY | 3 cut(s) | 36, 817, 1167 |
| BstYI | RGATCY | 3 cut(s) | 36, 817, 1167 |
| BsuRI | GGCC | 1 cut(s) | 212 |
| BtgI | CCRYGG | 1 cut(s) | 931 |
| BtgZI | GCGATG | 2 cut(s) | 252, 902 |
| BtsCI | GGATG | 3 cut(s) | 135, 586, 1261 |
| BtsI | GCAGTG | 1 cut(s) | 378 |
| BtsIMutI | CAGTG | 5 cut(s) | 112, 378, 491, 1373, 1383 |
| BveI | ACCTGC | 1 cut(s) | 422 |
| CfoI | GCGC | 1 cut(s) | 709 |
| Cfr13I | GGNCC | 2 cut(s) | 210, 969 |
| Csp6I | GTAC | 3 cut(s) | 218, 287, 632 |
| CviAII | CATG | 5 cut(s) | 483, 662, 744, 893, 1330 |
| CviJI | RGCY | 6 cut(s) | 76, 212, 558, 613, 793, 1114 |
| CviKI_1 | RGCY | 6 cut(s) | 76, 212, 558, 613, 793, 1114 |
| CviQI | GTAC | 3 cut(s) | 218, 287, 632 |
| DdeI | CTNAG | 3 cut(s) | 33, 468, 1402 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 590 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 590 |
| Eam1104I | CTCTTC | 3 cut(s) | 296, 948, 1332 |
| EarI | CTCTTC | 3 cut(s) | 296, 948, 1332 |
| Eco47I | GGWCC | 1 cut(s) | 969 |
| Eco57I | CTGAAG | 1 cut(s) | 525 |
| Eco88I | CYCGRG | 1 cut(s) | 450 |
| EcoO109I | RGGNCCY | 1 cut(s) | 969 |
| EcoRI | GAATTC | 1 cut(s) | 844 |
| FaeI | CATG | 5 cut(s) | 486, 665, 747, 896, 1333 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1380, 1412 |
| FatI | CATG | 5 cut(s) | 482, 661, 743, 892, 1329 |
| FbaI | TGATCA | 2 cut(s) | 442, 1318 |
| Fnu4HI | GCNGC | 2 cut(s) | 625, 766 |
| FokI | GGATG | 3 cut(s) | 122, 573, 1268 |
| Fsp4HI | GCNGC | 2 cut(s) | 625, 766 |
| FspBI | CTAG | 4 cut(s) | 960, 966, 1188, 1444 |
| GlaI | GCGC | 1 cut(s) | 708 |
| GluI | GCNGC | 2 cut(s) | 625, 766 |
| HaeIII | GGCC | 1 cut(s) | 212 |
| HapII | CCGG | 1 cut(s) | 251 |
| HhaI | GCGC | 1 cut(s) | 709 |
| Hin1II | CATG | 5 cut(s) | 486, 665, 747, 896, 1333 |
| Hin6I | GCGC | 1 cut(s) | 707 |
| HinP1I | GCGC | 1 cut(s) | 707 |
| HindIII | AAGCTT | 2 cut(s) | 611, 791 |
| HinfI | GANTC | 4 cut(s) | 102, 1045, 1148, 1230 |
| HpaII | CCGG | 1 cut(s) | 251 |
| HphI | GGTGA | 5 cut(s) | 16, 32, 437, 446, 1089 |
| Hpy188I | TCNGA | 6 cut(s) | 36, 73, 684, 948, 1156, 1405 |
| Hpy188III | TCNNGA | 3 cut(s) | 1090, 1106, 1210 |
| HpyAV | CCTTC | 1 cut(s) | 1280 |
| HpyCH4III | ACNGT | 3 cut(s) | 28, 257, 1179 |
| HpyCH4IV | ACGT | 2 cut(s) | 722, 854 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1424 |
| HpyF3I | CTNAG | 3 cut(s) | 33, 468, 1402 |
| HpySE526I | ACGT | 2 cut(s) | 722, 854 |
| Hsp92II | CATG | 5 cut(s) | 486, 665, 747, 896, 1333 |
| HspAI | GCGC | 1 cut(s) | 707 |
| Ksp22I | TGATCA | 2 cut(s) | 442, 1318 |
| LguI | GCTCTTC | 1 cut(s) | 948 |
| Lsp1109I | GCAGC | 2 cut(s) | 611, 752 |
| LweI | GCATC | 2 cut(s) | 109, 154 |
| MaeI | CTAG | 4 cut(s) | 960, 966, 1188, 1444 |
| MaeII | ACGT | 2 cut(s) | 722, 854 |
| MaeIII | GTNAC | 6 cut(s) | 131, 169, 865, 881, 1200, 1378 |
| MfeI | CAATTG | 1 cut(s) | 1054 |
| MflI | RGATCY | 3 cut(s) | 36, 817, 1167 |
| MluCI | AATT | 9 cut(s) | 640, 691, 713, 844, 898, 1054, 1070, 1352, 1420 |
| MmeI | TCCRAC | 2 cut(s) | 350, 1254 |
| MnlI | CCTC | 9 cut(s) | 10, 223, 264, 415, 459, 543, 569, 831, 1162 |
| MroXI | GAANNNNTTC | 1 cut(s) | 801 |
| MseI | TTAA | 6 cut(s) | 93, 345, 696, 725, 780, 1128 |
| MslI | CAYNNNNRTG | 1 cut(s) | 780 |
| MspI | CCGG | 1 cut(s) | 251 |
| MspR9I | CCNGG | 1 cut(s) | 251 |
| MunI | CAATTG | 1 cut(s) | 1054 |
| Mva1269I | GAATGC | 2 cut(s) | 672, 1139 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1424 |
| NciI | CCSGG | 1 cut(s) | 251 |
| NlaIII | CATG | 5 cut(s) | 486, 665, 747, 896, 1333 |
| NlaIV | GGNNCC | 2 cut(s) | 819, 1169 |
| NmeAIII | GCCGAG | 1 cut(s) | 38 |
| NmuCI | GTSAC | 5 cut(s) | 131, 169, 881, 1200, 1378 |
| NspI | RCATGY | 1 cut(s) | 486 |
| NspV | TTCGAA | 1 cut(s) | 316 |
| PaqCI | CACCTGC | 1 cut(s) | 422 |
| PciSI | GCTCTTC | 1 cut(s) | 948 |
| PctI | GAATGC | 2 cut(s) | 672, 1139 |
| PdmI | GAANNNNTTC | 1 cut(s) | 801 |
| PfeI | GAWTC | 4 cut(s) | 102, 1045, 1148, 1230 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 195 |
| PkrI | GCNGC | 2 cut(s) | 626, 767 |
| PpuMI | RGGWCCY | 1 cut(s) | 969 |
| PshBI | ATTAAT | 1 cut(s) | 780 |
| Psp1406I | AACGTT | 1 cut(s) | 854 |
| Psp5II | RGGWCCY | 1 cut(s) | 969 |
| PspN4I | GGNNCC | 2 cut(s) | 819, 1169 |
| PspPI | GGNCC | 2 cut(s) | 210, 969 |
| PspPPI | RGGWCCY | 1 cut(s) | 969 |
| PstI | CTGCAG | 2 cut(s) | 333, 907 |
| PsuI | RGATCY | 3 cut(s) | 36, 817, 1167 |
| RsaI | GTAC | 3 cut(s) | 219, 288, 633 |
| RsaNI | GTAC | 3 cut(s) | 218, 287, 632 |
| RseI | CAYNNNNRTG | 1 cut(s) | 780 |
| SapI | GCTCTTC | 1 cut(s) | 948 |
| SaqAI | TTAA | 6 cut(s) | 93, 345, 696, 725, 780, 1128 |
| SatI | GCNGC | 2 cut(s) | 625, 766 |
| Sau96I | GGNCC | 2 cut(s) | 210, 969 |
| ScrFI | CCNGG | 1 cut(s) | 251 |
| SfaNI | GCATC | 2 cut(s) | 109, 154 |
| SfcI | CTRYAG | 4 cut(s) | 329, 417, 825, 903 |
| SfuI | TTCGAA | 1 cut(s) | 316 |
| SinI | GGWCC | 1 cut(s) | 969 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 780 |
| SmlI | CTYRAG | 3 cut(s) | 560, 1088, 1208 |
| SmoI | CTYRAG | 3 cut(s) | 560, 1088, 1208 |
| Sse9I | AATT | 9 cut(s) | 640, 691, 713, 844, 898, 1054, 1070, 1352, 1420 |
| SspMI | CTAG | 4 cut(s) | 960, 966, 1188, 1444 |
| StyD4I | CCNGG | 1 cut(s) | 249 |
| TaaI | ACNGT | 3 cut(s) | 28, 257, 1179 |
| TaiI | ACGT | 2 cut(s) | 725, 857 |
| TaqI | TCGA | 2 cut(s) | 316, 408 |
| TasI | AATT | 9 cut(s) | 640, 691, 713, 844, 898, 1054, 1070, 1352, 1420 |
| TatI | WGTACW | 2 cut(s) | 286, 631 |
| TfiI | GAWTC | 4 cut(s) | 102, 1045, 1148, 1230 |
| Tru1I | TTAA | 6 cut(s) | 93, 345, 696, 725, 780, 1128 |
| Tru9I | TTAA | 6 cut(s) | 93, 345, 696, 725, 780, 1128 |
| TscAI | CASTG | 5 cut(s) | 112, 385, 498, 1373, 1383 |
| TseFI | GTSAC | 5 cut(s) | 131, 169, 881, 1200, 1378 |
| TseI | GCWGC | 2 cut(s) | 624, 765 |
| Tsp45I | GTSAC | 5 cut(s) | 131, 169, 881, 1200, 1378 |
| TspDTI | ATGAA | 7 cut(s) | 132, 255, 732, 764, 794, 1146, 1346 |
| TspGWI | ACGGA | 1 cut(s) | 920 |
| TspRI | CASTG | 5 cut(s) | 112, 385, 498, 1373, 1383 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 195 |
| VpaK11BI | GGWCC | 1 cut(s) | 969 |
| VspI | ATTAAT | 1 cut(s) | 780 |
| XapI | RAATTY | 3 cut(s) | 640, 691, 844 |
| XceI | RCATGY | 1 cut(s) | 486 |
| XmnI | GAANNNNTTC | 1 cut(s) | 801 |
| XspI | CTAG | 4 cut(s) | 960, 966, 1188, 1444 |