Prupe.4G232500_v2.0.a1

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0013187
Physical Location & Seq
Forward (+)
14956240 .. 14960777
4538 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G232500.1

Sequence Viewer

Length: 1767 bp
ATGGCTACGACAGTGGAAACAATGTCTGCGGCCATGGAACTGATCGAGACAAAGAAAGAGAACCTAAAGAAGGCCTTCGATGAGCTTCAAGCCCACTACAACGTCCTCTCCTCCTTCAATCTCACCTGGTCTGACCTCGATTCCCACTTCACCTCCATCAAAGACTCCCTTAACCAAAAACTCCAGCTCCTCCAAACCCTCGAGTCCCAATCCTCAAATCCTTCTTCTTCTATACCCCAAGACCCCTGTTCATCAAACCCTCCATCTCAGAAACCACAAGACCCTTCTTATTCTTCATATCAGATACCAAAGGACCCCTCTTCTTCGTCGAATTTACCGACCCATATAGCAGAAGACCCGTCTTTGTCATCGTTGACGTTGGCCCAGATAACGGAAGACACCAAAACACTAACCCAGATAAAAAAGGACCCACCTTCCTCATCAATTTCGTCGACCCAGGTGGTAAAGGACCCTTCTTCATCAAACCCTCCGACCCGGAACACGGTTGAGCTTGGTACGAGTCTTCGGTCGGTTTCAGTTCCTCCTCGGCCAGAGTTGGTGGCATTTTGTGAGCGAATGGATGCAATGGGGTTGAGAAAGTATATGAATGAGACCTTGGATAACCGAAACACCATCCGGGCCGAGCTCCTGGGAGCTATACGGTACGCCAAGGACCCTGCTGCGATGGTTTTAGATGCAGTAGATGACTTTTATAGTGAGAACGGGAGGGATAAGGGAGATAAGGACCCGGAATTGTTTGCTGTGAGGAGAAGTGGTGTGCTGTTATTGGAAGTGCTAATGGGGGTTTCACCGGATGTAGGATTCGAAGTGAGAGAGAGAGCCAAGGAGTTGGCGTTGGCTTGGAAAGGGAAGGTGAGTATGGATGGTGAAAACCCGTTTGAGGCGTTGGGATTCTTGCATTTGGTGGCAGCTTATGGACTGCAGTCTGAATTCAAGATGGATGAGCTTGTTGATCATTTTGTTATTATTGCGCGGTATAGGCAAGCTATCGAATTGTGCCAGAAAATTGGTTTGGGAGATAAGATTGCAGATCTCATTCAGAAACTTGTAAGTAAGGGAAAACATCTTTTGGCTGTTAAATTCATTTCTGAATTTGATCTGACTGATAAGTTCCCACCAGTTCCCCTCTTGAAGTCCTATTTGAAAGAGTCTAAGAAGCTCGCTAAGAAAGTTTGTAAGGATGGAAATAACTCCCGCAAGTCAATGAATGAGGCCACAGCCAAAGAAACCGGTGCTTTGAAATCAGTAATCAAAGTTATTGAAGACCTCAAGCTCCAATCTGATTATCCACCGGCTGTTCTTCAAAAGCGACTTGAGCAGCTGGAGAAAGAGAAAGCAAACAGAAAACGCCATGCAGAAGCTCCTGCTGTCAAGCCTCAGCAACATAAACAGCAGACAGCAAAGCAGCAAAAACTGAAGCAGCAGCAGTATGGAAACAAGCATCCTCGAATGACTGCTCCAGTTGGCCCTGCAGCAGTCTCAAATAGTATCAATGCAGCAGGTTTGTTGCCAGCCTATGCCTTGTCAGGCACCGCTACTCCAATTCCCCCTTATGCGGGTTCATCAGCTGGGCTGTATGGTTTTGCAGGAGGCCAGATGGGTTTTCTTGGGAACCCGGGCCCTGCTAGTAACCATTTATACTCATCTGACCATTATGTGCCGTCGGGCTATTATAACAGGCAAACTGCCTATGGTGGATATGGTGTACCCCCTGAGTACCGTCCTCCATCTCACTATCCTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009791 GO:0010228 GO:0022414 GO:0032501 GO:0032502 GO:0048608 GO:0048731 GO:0048856 GO:0061458
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

589

Amino Acids

64.63

Weight (kDa)

8.62

Isoelectric Point (pI)

49.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013187)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31814 AT5G16320
fragaria_vesca FvH4_3g24000
malus_domestica MD11G1205100.v1.1
prunus_persica Prupe.4G232500_v2.0.a1
pyrus_communis pycom11g17780
rosa_chinensis RchiOBHm_Chr5g0042571
rosa_laevigata RLG00000034141
rosa_multiflora Rmu_sc0004704.1_g000003
rosa_roxburghii Rroxscaffold_1G00038070
rosa_rugosa Rorug05G0202600 Rorug05G0202700 Rorug05G0202800
rosa_samantha Rh5AG287800 Rh5BG292200 Rh5CG324600 Rh5DG302000
rosa_wichuraiana Rw5G026720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1695
Acc36I ACCTGC 1 cut(s) 1511
AccB1I GGYRCC 1 cut(s) 1550
AccI GTMKAC 1 cut(s) 452
AccII CGCG 1 cut(s) 994
AciI CCGC 5 cut(s) 29, 994, 1216, 1554, 1577
AcoI YGGCCR 2 cut(s) 30, 548
AcsI RAATTY 4 cut(s) 331, 950, 1100, 1112
AcuI CTGAAG 1 cut(s) 1457
AfaI GTAC 4 cut(s) 517, 665, 1728, 1739
AfiI CCNNNNNNNGG 7 cut(s) 70, 391, 502, 818, 901, 1576, 1577
AgeI ACCGGT 1 cut(s) 1250
AgsI TTSAA 8 cut(s) 89, 118, 955, 1153, 1165, 1261, 1283, 1325
AjnI CCWGG 3 cut(s) 125, 456, 648
AjuI GAANNNNNNNTTGG 4 cut(s) 599, 631, 1016, 1048
Alw21I GWGCWC 1 cut(s) 648
Alw26I GTCTC 3 cut(s) 41, 605, 1504
Ama87I CYCGRG 2 cut(s) 200, 1636
AoxI GGCC 9 cut(s) 30, 72, 381, 548, 639, 1233, 1486, 1612, 1639
ApaI GGGCCC 1 cut(s) 1643
ApeKI GCWGC 8 cut(s) 680, 929, 1339, 1426, 1441, 1444, 1493, 1517
ApoI RAATTY 4 cut(s) 331, 950, 1100, 1112
AsiGI ACCGGT 1 cut(s) 1250
Asp700I GAANNNNTTC 1 cut(s) 74
AspLEI GCGC 1 cut(s) 994
AsuC2I CCSGG 5 cut(s) 496, 638, 749, 1637, 1638
AsuHPI GGTGA 5 cut(s) 115, 142, 801, 886, 899
AsuII TTCGAA 1 cut(s) 825
AvaI CYCGRG 2 cut(s) 200, 1636
AvaII GGWCC 5 cut(s) 313, 427, 469, 673, 745
BaeGI GKGCMC 1 cut(s) 1643
BanI GGYRCC 1 cut(s) 1550
BanII GRGCYC 2 cut(s) 648, 1643
BbsI GAAGAC 4 cut(s) 360, 402, 515, 1290
Bbv12I GWGCWC 1 cut(s) 648
BbvCI CCTCAGC 1 cut(s) 1398
BbvI GCAGC 8 cut(s) 667, 941, 1351, 1438, 1453, 1456, 1505, 1529
BccI CCATC 9 cut(s) 164, 271, 641, 679, 878, 952, 1196, 1612, 1756
BceAI ACGGC 1 cut(s) 1666
BciT130I CCWGG 3 cut(s) 127, 458, 650
BclI TGATCA 1 cut(s) 973
BcnI CCSGG 5 cut(s) 496, 638, 749, 1637, 1638
BcoDI GTCTC 3 cut(s) 41, 605, 1504
BfaI CTAG 1 cut(s) 1647
BfmI CTRYAG 2 cut(s) 941, 1491
BfuAI ACCTGC 1 cut(s) 1511
BglII AGATCT 1 cut(s) 1051
BisI GCNGC 9 cut(s) 30, 681, 930, 1340, 1427, 1442, 1445, 1494, 1518
BlsI GCNGC 9 cut(s) 31, 682, 931, 1341, 1428, 1443, 1446, 1495, 1519
Bme1390I CCNGG 8 cut(s) 127, 458, 496, 638, 650, 749, 1637, 1638
Bme18I GGWCC 5 cut(s) 313, 427, 469, 673, 745
BmeT110I CYCGRG 2 cut(s) 200, 1636
BmiI GGNNCC 8 cut(s) 315, 429, 471, 675, 747, 1552, 1634, 1641
BmrFI CCNGG 8 cut(s) 127, 458, 496, 638, 650, 749, 1637, 1638
BmsI GCATC 3 cut(s) 571, 685, 1471
BoxI GACNNNNGTC 1 cut(s) 943
BpiI GAAGAC 4 cut(s) 360, 402, 515, 1290
BpmI CTGGAG 3 cut(s) 167, 1364, 1464
Bpu10I CCTNAGC 1 cut(s) 1398
Bpu14I TTCGAA 1 cut(s) 825
BpuEI CTTGAG 2 cut(s) 1274, 1355
BpuMI CCSGG 5 cut(s) 496, 638, 749, 1637, 1638
BsaI GGTCTC 1 cut(s) 605
BsaJI CCNNGG 8 cut(s) 33, 456, 545, 615, 649, 669, 843, 1636
BsaWI WCCGGW 2 cut(s) 811, 1250
Bsc4I CCNNNNNNNGG 7 cut(s) 70, 391, 502, 818, 901, 1576, 1577
Bse118I RCCGGY 2 cut(s) 1250, 1312
Bse1I ACTGG 2 cut(s) 1139, 1481
Bse3DI GCAATG 1 cut(s) 591
BseBI CCWGG 3 cut(s) 127, 458, 650
BseDI CCNNGG 8 cut(s) 33, 456, 545, 615, 649, 669, 843, 1636
BseGI GGATG 7 cut(s) 586, 633, 820, 889, 967, 1207, 1462
BseLI CCNNNNNNNGG 7 cut(s) 70, 391, 502, 818, 901, 1576, 1577
BseMI GCAATG 1 cut(s) 591
BseMII CTCAG 3 cut(s) 281, 1412, 1725
BseNI ACTGG 2 cut(s) 1139, 1481
BseRI GAGGAG 4 cut(s) 100, 179, 534, 781
BseSI GKGCMC 1 cut(s) 1643
BseXI GCAGC 8 cut(s) 667, 941, 1351, 1438, 1453, 1456, 1505, 1529
BseYI CCCAGC 1 cut(s) 1589
Bsh1236I CGCG 1 cut(s) 994
Bsh1285I CGRYCG 1 cut(s) 530
BshFI GGCC 9 cut(s) 32, 74, 383, 550, 641, 1235, 1488, 1614, 1641
BshNI GGYRCC 1 cut(s) 1550
BshTI ACCGGT 1 cut(s) 1250
BsiEI CGRYCG 1 cut(s) 530
BsiHKAI GWGCWC 1 cut(s) 648
BsiHKCI CYCGRG 2 cut(s) 200, 1636
BsiSI CCGG 7 cut(s) 496, 637, 749, 812, 1251, 1313, 1637
BslFI GGGAC 1 cut(s) 190
BslI CCNNNNNNNGG 7 cut(s) 70, 391, 502, 818, 901, 1576, 1577
BsmAI GTCTC 3 cut(s) 41, 605, 1504
BsmFI GGGAC 1 cut(s) 190
BsnI GGCC 9 cut(s) 32, 74, 383, 550, 641, 1235, 1488, 1614, 1641
Bso31I GGTCTC 1 cut(s) 605
BsoBI CYCGRG 2 cut(s) 200, 1636
Bsp119I TTCGAA 1 cut(s) 825
Bsp120I GGGCCC 1 cut(s) 1639
Bsp1286I GDGCHC 2 cut(s) 648, 1643
Bsp143I GATC 4 cut(s) 42, 973, 1051, 1117
Bsp19I CCATGG 1 cut(s) 33
BspACI CCGC 5 cut(s) 29, 994, 1216, 1554, 1577
BspANI GGCC 9 cut(s) 32, 74, 383, 550, 641, 1235, 1488, 1614, 1641
BspCNI CTCAG 3 cut(s) 280, 1411, 1726
BspFNI CGCG 1 cut(s) 994
BspLI GGNNCC 8 cut(s) 315, 429, 471, 675, 747, 1552, 1634, 1641
BspMAI CTGCAG 2 cut(s) 945, 1495
BspMI ACCTGC 1 cut(s) 1511
BspT104I TTCGAA 1 cut(s) 825
BspT107I GGYRCC 1 cut(s) 1550
BspTNI GGTCTC 1 cut(s) 605
BsrDI GCAATG 1 cut(s) 591
BsrFI RCCGGY 2 cut(s) 1250, 1312
BsrI ACTGG 2 cut(s) 1139, 1481
BssAI RCCGGY 2 cut(s) 1250, 1312
BssECI CCNNGG 8 cut(s) 33, 456, 545, 615, 649, 669, 843, 1636
BssMI GATC 4 cut(s) 42, 973, 1051, 1117
BssT1I CCWWGG 4 cut(s) 33, 615, 669, 843
Bst2UI CCWGG 3 cut(s) 127, 458, 650
Bst4CI ACNGT 4 cut(s) 13, 505, 663, 1742
Bst6I CTCTTC 1 cut(s) 325
BstBI TTCGAA 1 cut(s) 825
BstC8I GCNNGC 3 cut(s) 1005, 1182, 1533
BstDEI CTNAG 6 cut(s) 267, 1173, 1185, 1398, 1734, 1761
BstDSI CCRYGG 1 cut(s) 33
BstENI CCTNNNNNAGG 1 cut(s) 68
BstF5I GGATG 7 cut(s) 586, 633, 820, 889, 967, 1207, 1462
BstFNI CGCG 1 cut(s) 994
BstHHI GCGC 1 cut(s) 994
BstKTI GATC 4 cut(s) 45, 976, 1054, 1120
BstMAI GTCTC 3 cut(s) 41, 605, 1504
BstMBI GATC 4 cut(s) 42, 973, 1051, 1117
BstMCI CGRYCG 1 cut(s) 530
BstMWI GCNNNNNNNGC 2 cut(s) 1000, 1336
BstNI CCWGG 3 cut(s) 127, 458, 650
BstPAI GACNNNNGTC 1 cut(s) 943
BstSCI CCNGG 8 cut(s) 125, 456, 494, 636, 648, 747, 1635, 1636
BstSFI CTRYAG 2 cut(s) 941, 1491
BstSLI GKGCMC 1 cut(s) 1643
BstUI CGCG 1 cut(s) 994
BstV1I GCAGC 8 cut(s) 667, 941, 1351, 1438, 1453, 1456, 1505, 1529
BstV2I GAAGAC 4 cut(s) 360, 402, 515, 1290
BstX2I RGATCY 1 cut(s) 1051
BstXI CCANNNNNNTGG 2 cut(s) 850, 1028
BstYI RGATCY 1 cut(s) 1051
BsuRI GGCC 9 cut(s) 32, 74, 383, 550, 641, 1235, 1488, 1614, 1641
BtgI CCRYGG 1 cut(s) 33
BtgZI GCGATG 1 cut(s) 698
BtsCI GGATG 7 cut(s) 586, 633, 820, 889, 967, 1207, 1462
BtsIMutI CAGTG 1 cut(s) 18
BveI ACCTGC 1 cut(s) 1511
Cac8I GCNNGC 3 cut(s) 1005, 1182, 1533
CfoI GCGC 1 cut(s) 994
Cfr10I RCCGGY 2 cut(s) 1250, 1312
Cfr9I CCCGGG 1 cut(s) 1636
CsiI ACCWGGT 1 cut(s) 125
Csp6I GTAC 4 cut(s) 516, 664, 1727, 1738
CspAI ACCGGT 1 cut(s) 1250
CviAII CATG 2 cut(s) 34, 1373
CviQI GTAC 4 cut(s) 516, 664, 1727, 1738
DdeI CTNAG 6 cut(s) 267, 1173, 1185, 1398, 1734, 1761
DpnI GATC 4 cut(s) 44, 975, 1053, 1119
DpnII GATC 4 cut(s) 42, 973, 1051, 1117
EaeI YGGCCR 2 cut(s) 30, 548
Eam1104I CTCTTC 1 cut(s) 325
EarI CTCTTC 1 cut(s) 325
Ecl136II GAGCTC 1 cut(s) 646
Eco130I CCWWGG 4 cut(s) 33, 615, 669, 843
Eco147I AGGCCT 1 cut(s) 74
Eco24I GRGCYC 2 cut(s) 648, 1643
Eco31I GGTCTC 1 cut(s) 605
Eco47I GGWCC 5 cut(s) 313, 427, 469, 673, 745
Eco53kI GAGCTC 1 cut(s) 646
Eco57I CTGAAG 1 cut(s) 1457
Eco88I CYCGRG 2 cut(s) 200, 1636
EcoICRI GAGCTC 1 cut(s) 646
EcoNI CCTNNNNNAGG 1 cut(s) 68
EcoO109I RGGNCCY 6 cut(s) 313, 427, 469, 673, 745, 1640
EcoRI GAATTC 1 cut(s) 950
EcoRII CCWGG 3 cut(s) 125, 456, 648
EcoT14I CCWWGG 4 cut(s) 33, 615, 669, 843
EcoT38I GRGCYC 2 cut(s) 648, 1643
ErhI CCWWGG 4 cut(s) 33, 615, 669, 843
FaeI CATG 2 cut(s) 37, 1376
FalI AAGNNNNNCTT 4 cut(s) 59, 91, 153, 185
FaqI GGGAC 1 cut(s) 190
FatI CATG 2 cut(s) 33, 1372
FauI CCCGC 2 cut(s) 1223, 1570
FbaI TGATCA 1 cut(s) 973
FblI GTMKAC 1 cut(s) 452
Fnu4HI GCNGC 9 cut(s) 30, 681, 930, 1340, 1427, 1442, 1445, 1494, 1518
FokI GGATG 7 cut(s) 593, 620, 827, 896, 974, 1214, 1449
FriOI GRGCYC 2 cut(s) 648, 1643
Fsp4HI GCNGC 9 cut(s) 30, 681, 930, 1340, 1427, 1442, 1445, 1494, 1518
FspBI CTAG 1 cut(s) 1647
GlaI GCGC 1 cut(s) 993
GluI GCNGC 9 cut(s) 30, 681, 930, 1340, 1427, 1442, 1445, 1494, 1518
GsaI CCCAGC 1 cut(s) 1593
GsuI CTGGAG 3 cut(s) 167, 1364, 1464
HaeIII GGCC 9 cut(s) 32, 74, 383, 550, 641, 1235, 1488, 1614, 1641
HapII CCGG 7 cut(s) 496, 637, 749, 812, 1251, 1313, 1637
HhaI GCGC 1 cut(s) 994
Hin1II CATG 2 cut(s) 37, 1376
Hin6I GCGC 1 cut(s) 992
HinP1I GCGC 1 cut(s) 992
HincII GTYRAC 2 cut(s) 375, 453
HindII GTYRAC 2 cut(s) 375, 453
HinfI GANTC 7 cut(s) 140, 164, 203, 520, 822, 912, 1169
HpaII CCGG 7 cut(s) 496, 637, 749, 812, 1251, 1313, 1637
HphI GGTGA 5 cut(s) 115, 142, 801, 886, 899
Hpy166II GTNNAC 3 cut(s) 375, 453, 1727
Hpy188III TCNNGA 3 cut(s) 46, 955, 1150
Hpy8I GTNNAC 3 cut(s) 375, 453, 1727
Hpy99I CGWCG 3 cut(s) 331, 454, 1687
HpyAV CCTTC 8 cut(s) 64, 85, 124, 231, 294, 444, 483, 865
HpyCH4III ACNGT 4 cut(s) 13, 505, 663, 1742
HpyCH4IV ACGT 2 cut(s) 102, 377
HpyCH4V TGCA 9 cut(s) 584, 698, 919, 943, 1049, 1376, 1493, 1517, 1607
HpyF10VI GCNNNNNNNGC 2 cut(s) 1000, 1336
HpyF3I CTNAG 6 cut(s) 267, 1173, 1185, 1398, 1734, 1761
HpySE526I ACGT 2 cut(s) 102, 377
Hsp92II CATG 2 cut(s) 37, 1376
HspAI GCGC 1 cut(s) 992
Ksp22I TGATCA 1 cut(s) 973
Kzo9I GATC 4 cut(s) 42, 973, 1051, 1117
LmnI GCTCC 6 cut(s) 192, 651, 653, 1299, 1387, 1483
Lsp1109I GCAGC 8 cut(s) 667, 941, 1351, 1438, 1453, 1456, 1505, 1529
LweI GCATC 3 cut(s) 571, 685, 1471
MabI ACCWGGT 1 cut(s) 125
MaeI CTAG 1 cut(s) 1647
MaeII ACGT 2 cut(s) 102, 377
MaeIII GTNAC 1 cut(s) 1649
MalI GATC 4 cut(s) 44, 975, 1053, 1119
MboI GATC 4 cut(s) 42, 973, 1051, 1117
MflI RGATCY 1 cut(s) 1051
MhlI GDGCHC 2 cut(s) 648, 1643
MluCI AATT 9 cut(s) 331, 444, 752, 950, 1013, 1026, 1100, 1112, 1563
MlyI GAGTC 4 cut(s) 158, 212, 529, 1178
MmeI TCCRAC 1 cut(s) 515
MroXI GAANNNNTTC 1 cut(s) 74
MseI TTAA 2 cut(s) 171, 1098
MspA1I CMGCKG 2 cut(s) 1342, 1589
MspI CCGG 7 cut(s) 496, 637, 749, 812, 1251, 1313, 1637
MspR9I CCNGG 8 cut(s) 127, 458, 496, 638, 650, 749, 1637, 1638
MvaI CCWGG 3 cut(s) 127, 458, 650
MvnI CGCG 1 cut(s) 994
MwoI GCNNNNNNNGC 2 cut(s) 1000, 1336
NciI CCSGG 5 cut(s) 496, 638, 749, 1637, 1638
NcoI CCATGG 1 cut(s) 33
NdeII GATC 4 cut(s) 42, 973, 1051, 1117
NlaIII CATG 2 cut(s) 37, 1376
NlaIV GGNNCC 8 cut(s) 315, 429, 471, 675, 747, 1552, 1634, 1641
NmeAIII GCCGAG 2 cut(s) 526, 667
NspV TTCGAA 1 cut(s) 825
PaeR7I CTCGAG 1 cut(s) 200
PceI AGGCCT 1 cut(s) 74
PcsI WCGNNNNNNNCGW 1 cut(s) 335
PdmI GAANNNNTTC 1 cut(s) 74
PfeI GAWTC 3 cut(s) 140, 822, 912
PinAI ACCGGT 1 cut(s) 1250
PkrI GCNGC 9 cut(s) 31, 682, 931, 1341, 1428, 1443, 1446, 1495, 1519
PleI GAGTC 4 cut(s) 158, 211, 528, 1177
PpsI GAGTC 4 cut(s) 158, 211, 528, 1177
PpuMI RGGWCCY 5 cut(s) 313, 427, 469, 673, 745
PshAI GACNNNNGTC 1 cut(s) 943
PsiI TTATAA 1 cut(s) 1695
Psp124BI GAGCTC 1 cut(s) 648
Psp5II RGGWCCY 5 cut(s) 313, 427, 469, 673, 745
Psp6I CCWGG 3 cut(s) 125, 456, 648
PspFI CCCAGC 1 cut(s) 1589
PspGI CCWGG 3 cut(s) 125, 456, 648
PspN4I GGNNCC 8 cut(s) 315, 429, 471, 675, 747, 1552, 1634, 1641
PspOMI GGGCCC 1 cut(s) 1639
PspPPI RGGWCCY 5 cut(s) 313, 427, 469, 673, 745
PspXI VCTCGAGB 1 cut(s) 200
PstI CTGCAG 2 cut(s) 945, 1495
PsuI RGATCY 1 cut(s) 1051
PvuII CAGCTG 2 cut(s) 1342, 1589
RsaI GTAC 4 cut(s) 517, 665, 1728, 1739
RsaNI GTAC 4 cut(s) 516, 664, 1727, 1738
SacI GAGCTC 1 cut(s) 648
SalI GTCGAC 1 cut(s) 451
SaqAI TTAA 2 cut(s) 171, 1098
SatI GCNGC 9 cut(s) 30, 681, 930, 1340, 1427, 1442, 1445, 1494, 1518
Sau3AI GATC 4 cut(s) 42, 973, 1051, 1117
SchI GAGTC 4 cut(s) 158, 212, 529, 1178
ScrFI CCNGG 8 cut(s) 127, 458, 496, 638, 650, 749, 1637, 1638
SduI GDGCHC 2 cut(s) 648, 1643
SexAI ACCWGGT 1 cut(s) 125
SfaNI GCATC 3 cut(s) 571, 685, 1471
SfcI CTRYAG 2 cut(s) 941, 1491
Sfr274I CTCGAG 1 cut(s) 200
SfuI TTCGAA 1 cut(s) 825
SinI GGWCC 5 cut(s) 313, 427, 469, 673, 745
SlaI CTCGAG 1 cut(s) 200
SmaI CCCGGG 1 cut(s) 1638
SmlI CTYRAG 3 cut(s) 200, 1289, 1334
SmoI CTYRAG 3 cut(s) 200, 1289, 1334
Sse9I AATT 9 cut(s) 331, 444, 752, 950, 1013, 1026, 1100, 1112, 1563
SseBI AGGCCT 1 cut(s) 74
SsiI CCGC 5 cut(s) 29, 994, 1216, 1554, 1577
SspMI CTAG 1 cut(s) 1647
SstI GAGCTC 1 cut(s) 648
StuI AGGCCT 1 cut(s) 74
StyD4I CCNGG 8 cut(s) 125, 456, 494, 636, 648, 747, 1635, 1636
StyI CCWWGG 4 cut(s) 33, 615, 669, 843
TaaI ACNGT 4 cut(s) 13, 505, 663, 1742
TaiI ACGT 2 cut(s) 105, 380
TaqI TCGA 9 cut(s) 45, 78, 138, 201, 329, 452, 825, 1011, 1468
TaqII GACCGA 1 cut(s) 516
TasI AATT 9 cut(s) 331, 444, 752, 950, 1013, 1026, 1100, 1112, 1563
TauI GCSGC 1 cut(s) 32
TfiI GAWTC 3 cut(s) 140, 822, 912
Tru1I TTAA 2 cut(s) 171, 1098
Tru9I TTAA 2 cut(s) 171, 1098
TscAI CASTG 1 cut(s) 18
TseI GCWGC 8 cut(s) 680, 929, 1339, 1426, 1441, 1444, 1493, 1517
TspDTI ATGAA 7 cut(s) 240, 285, 468, 620, 1093, 1241, 1572
TspGWI ACGGA 1 cut(s) 407
TspMI CCCGGG 1 cut(s) 1636
TspRI CASTG 1 cut(s) 18
VpaK11BI GGWCC 5 cut(s) 313, 427, 469, 673, 745
XagI CCTNNNNNAGG 1 cut(s) 68
XapI RAATTY 4 cut(s) 331, 950, 1100, 1112
XhoI CTCGAG 1 cut(s) 200
XmaI CCCGGG 1 cut(s) 1636
XmiI GTMKAC 1 cut(s) 452
XmnI GAANNNNTTC 1 cut(s) 74
XspI CTAG 1 cut(s) 1647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.