RLG00000034141

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0013187
Physical Location & Seq
Forward (+)
37282247 .. 37284692
2446 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034141

Sequence Viewer

Length: 1761 bp
ATGGCGACGACAGAGGAAACAATCTCAGCGGCTATGCAACTGATCGACCCAAAGAAAGAGAACCTAAAGAAGGCCTTCGACGACCTTCAATCCCACTCCGACGTCCTCTCTCTCTTCTCTCTCACCTGGTCCGACCTCGATTCCCATTTCACCTCCCTCCAAAACTCCCTTTCCCAAAAACTCCAACTCCTCCAAACCCTAGAGTCCCAATCCCCAAACCCTTCTTCCTCTGCCCCAATCCCAGAAACCCAGATAACCCAAGACCCGTCTTCATCGAATTTACAGACCCAGATACCAAAGGACTCATCTTTGGACCCCAAAGCACCAACCCAGATAGCGAAGGATCCGAATTTGTGTACCCAGGTAGCAAAGGACTCATTTTTGGAGCCCAAAGCACCAACCCAGATAGCAAAGGATCCGAATTTGTCGACCCAGGGAGCAAAGGACCCGAATTTGTCGACTCAGGTAGCGAAAGAGTCTTCTTCTTCATTGAAACCGCCGAGCCGGAACAGTGTTGAGCTCAACAATGGTCATGACGCAGATGCAGTGCCTCCTCGGCCTGAGTTGGTGGCGTTTTGTGAGAAAATGGATGCAATTGGGCTGAGGAAGTATATGAATGACACTAAAAATAACCGGAACACGATCCGGTCCGAGCTCCATGGGGCTTTACGGCACGCTCAGGACCCGGCATTGATGGTTCTCAATGCAATGGATGGGTTTTACGTGGAGAATAAGGGTGATAAGGACCTGGAAGTGAGTAGTGTGAGGAGAACTGGTGTGCTGTTGTTGGAAGTGTTGTGTGGAGTTTCGCCAAATGTAGGAGTGGAGGTGAGGGAGAGAGCCAAGAAGTTGGCATTGGAGTGGAAAGGGAAGGTTAGTATGGAGGGAGAGAACCAGTTTGAGGCGTTGGGATTCTTGCATTTGGTGGCAGCTTATGGACTGGTGTCTGAATTCAACATGGATGAGCTTGTGGATCATTTGGTTGTTGTTGCAAGGTACAGGCAAGCTACTGATTTGTGCCGCAGACTTGGCTTGGGAGATAAGCTTGCAGATCTGATTCAGAAACTCATGAGCAATGGCAAACATCTTTTGGCTATCAAGTTCATTTCTGAATTTGATATGACTGATAAGTTTCCACCTGTTCCCATCTTAAAAGCGTATGTGAAGGAGTCTAAAAGGTTGGCCAAGAAAGTTTGTGAGGAAGGAAATAACTCTAAGAAGGCGGCGAATGAGGCCATAGCCAAAGAAACCGGTGCTCTGAAATCAGTAATTAAAATTATTGAGGACCTCAAGCTCCAATCTGAATATCCACCGTCTTCTCTTGAAAAGCGAATTGACCAGTTGGAGAAGGAGAAGGCAAACAGAAAACGGCAAGCAGGAGCTCCTGCTGGGAAGCCTTTTCAACTGCAGCAGCAGTATGGTAACAAGCGTCCTCGAATGACTGCTCCTGTTGGCTCCACAGCAGTCTCAAATGGTGCAGCAGGTTTGTTGGTAGAGTCTCCTGCTCCACATGTGAGCTCTGCAGCTGCACCCTATGTCGTGTCGGGCACTGCTCCTCCAGTTGCCCCTTATGTGGGTTCATCAACTGGGCAGTATGGTTTTGCAGGAGGCCAGATGGGTTTCCCTGGGAACCCAGGCCCCTCTAGTACCCATTTATACTCATCCGAACAGTATGTGCCCTCGGGCTATTACAACAGGCTAACTGCCTATGGTGGATATGGTGTACCCCCTCAATACCATCCATCTTACTATTCTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009791 GO:0010228 GO:0022414 GO:0032501 GO:0032502 GO:0048608 GO:0048731 GO:0048856 GO:0061458
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

587

Amino Acids

63.77

Weight (kDa)

7.62

Isoelectric Point (pI)

46.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 183 - 459 4.6e-100 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013187)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31814 AT5G16320
fragaria_vesca FvH4_3g24000
malus_domestica MD11G1205100.v1.1
prunus_persica Prupe.4G232500_v2.0.a1
pyrus_communis pycom11g17780
rosa_chinensis RchiOBHm_Chr5g0042571
rosa_laevigata RLG00000034141
rosa_multiflora Rmu_sc0004704.1_g000003
rosa_roxburghii Rroxscaffold_1G00038070
rosa_rugosa Rorug05G0202600 Rorug05G0202700 Rorug05G0202800
rosa_samantha Rh5AG287800 Rh5BG292200 Rh5CG324600 Rh5DG302000
rosa_wichuraiana Rw5G026720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 105
Acc36I ACCTGC 1 cut(s) 1472
AccI GTMKAC 2 cut(s) 428, 458
AciI CCGC 4 cut(s) 29, 497, 1021, 1223
AclWI GGATC 6 cut(s) 338, 351, 410, 423, 637, 981
AcoI YGGCCR 1 cut(s) 1182
AcsI RAATTY 6 cut(s) 277, 349, 421, 451, 950, 1112
AcyI GRCGYC 1 cut(s) 102
AfaI GTAC 4 cut(s) 358, 998, 1648, 1725
AfiI CCNNNNNNNGG 5 cut(s) 70, 818, 901, 1573, 1574
AflIII ACRYGT 1 cut(s) 1510
AgeI ACCGGT 1 cut(s) 1250
AgsI TTSAA 5 cut(s) 89, 493, 955, 1325, 1403
AjnI CCWGG 6 cut(s) 125, 360, 432, 747, 1624, 1633
AjuI GAANNNNNNNTTGG 4 cut(s) 208, 240, 839, 871
Alw21I GWGCWC 5 cut(s) 522, 657, 1258, 1384, 1520
Alw26I GTCTC 2 cut(s) 1471, 1503
AlwI GGATC 6 cut(s) 338, 351, 410, 423, 637, 981
Ama87I CYCGRG 1 cut(s) 1681
AoxI GGCC 6 cut(s) 72, 557, 1182, 1233, 1609, 1636
ApeKI GCWGC 6 cut(s) 929, 1408, 1411, 1478, 1523, 1526
ApoI RAATTY 6 cut(s) 277, 349, 421, 451, 950, 1112
AsiGI ACCGGT 1 cut(s) 1250
Asp700I GAANNNNTTC 1 cut(s) 74
AspS9I GGNCC 8 cut(s) 129, 313, 445, 648, 682, 745, 1285, 1637
AsuC2I CCSGG 1 cut(s) 686
AsuHPI GGTGA 4 cut(s) 115, 142, 749, 841
AvaI CYCGRG 1 cut(s) 1681
AvaII GGWCC 7 cut(s) 129, 313, 445, 648, 682, 745, 1285
BaeGI GKGCMC 2 cut(s) 1550, 1680
BalI TGGCCA 1 cut(s) 1184
BamHI GGATCC 2 cut(s) 343, 415
BanII GRGCYC 5 cut(s) 390, 522, 657, 1384, 1520
BbsI GAAGAC 3 cut(s) 261, 471, 1308
Bbv12I GWGCWC 5 cut(s) 522, 657, 1258, 1384, 1520
BbvCI CCTCAGC 1 cut(s) 602
BbvI GCAGC 6 cut(s) 941, 1420, 1423, 1490, 1513, 1535
BccI CCATC 6 cut(s) 688, 707, 1154, 1609, 1746, 1750
BceAI ACGGC 2 cut(s) 686, 1385
BciT130I CCWGG 6 cut(s) 127, 362, 434, 749, 1626, 1635
BcnI CCSGG 1 cut(s) 686
BcoDI GTCTC 2 cut(s) 1471, 1503
BfaI CTAG 2 cut(s) 200, 1644
BfmI CTRYAG 2 cut(s) 1406, 1521
BfuAI ACCTGC 1 cut(s) 1472
BglI GCCNNNNNGGC 1 cut(s) 556
BglII AGATCT 1 cut(s) 1051
BisI GCNGC 9 cut(s) 30, 930, 1021, 1224, 1409, 1412, 1479, 1524, 1527
BlsI GCNGC 9 cut(s) 31, 931, 1022, 1225, 1410, 1413, 1480, 1525, 1528
Bme1390I CCNGG 7 cut(s) 127, 362, 434, 686, 749, 1626, 1635
Bme18I GGWCC 7 cut(s) 129, 313, 445, 648, 682, 745, 1285
BmeT110I CYCGRG 1 cut(s) 1681
BmgT120I GGNCC 8 cut(s) 129, 313, 445, 648, 682, 745, 1285, 1637
BmiI GGNNCC 9 cut(s) 315, 345, 387, 417, 447, 684, 1456, 1631, 1639
BmrFI CCNGG 7 cut(s) 127, 362, 434, 686, 749, 1626, 1635
BmrI ACTGGG 1 cut(s) 1596
BmsI GCATC 2 cut(s) 532, 580
BmuI ACTGGG 1 cut(s) 1596
BoxI GACNNNNGTC 1 cut(s) 943
BpiI GAAGAC 3 cut(s) 261, 471, 1308
BpmI CTGGAG 1 cut(s) 1542
Bpu10I CCTNAGC 2 cut(s) 602, 678
BpuEI CTTGAG 1 cut(s) 1274
BpuMI CCSGG 1 cut(s) 686
BsaAI YACGTR 1 cut(s) 724
BsaHI GRCGYC 1 cut(s) 102
BsaJI CCNNGG 9 cut(s) 360, 432, 433, 554, 658, 1624, 1625, 1633, 1680
BsaWI WCCGGW 3 cut(s) 633, 645, 1250
BsaXI ACNNNNNCTCC 8 cut(s) 171, 201, 760, 790, 813, 843, 1540, 1570
Bsc4I CCNNNNNNNGG 5 cut(s) 70, 818, 901, 1573, 1574
Bse118I RCCGGY 1 cut(s) 1250
Bse1I ACTGG 6 cut(s) 778, 895, 945, 1339, 1559, 1591
Bse3DI GCAATG 2 cut(s) 714, 1081
BseBI CCWGG 6 cut(s) 127, 362, 434, 749, 1626, 1635
BseDI CCNNGG 9 cut(s) 360, 432, 433, 554, 658, 1624, 1625, 1633, 1680
BseGI GGATG 5 cut(s) 595, 718, 967, 1661, 1738
BseLI CCNNNNNNNGG 5 cut(s) 70, 818, 901, 1573, 1574
BseMI GCAATG 2 cut(s) 714, 1081
BseMII CTCAG 5 cut(s) 39, 476, 552, 593, 692
BseNI ACTGG 6 cut(s) 778, 895, 945, 1339, 1559, 1591
BseRI GAGGAG 4 cut(s) 179, 543, 781, 1545
BseSI GKGCMC 2 cut(s) 1550, 1680
BseXI GCAGC 6 cut(s) 941, 1420, 1423, 1490, 1513, 1535
BseYI CCCAGC 1 cut(s) 1388
BsgI GTGCAG 2 cut(s) 1497, 1512
BshFI GGCC 6 cut(s) 74, 559, 1184, 1235, 1611, 1638
BshTI ACCGGT 1 cut(s) 1250
BsiHKAI GWGCWC 5 cut(s) 522, 657, 1258, 1384, 1520
BsiHKCI CYCGRG 1 cut(s) 1681
BsiSI CCGG 5 cut(s) 505, 634, 646, 686, 1251
BslFI GGGAC 1 cut(s) 190
BslI CCNNNNNNNGG 5 cut(s) 70, 818, 901, 1573, 1574
BsmAI GTCTC 2 cut(s) 1471, 1503
BsmFI GGGAC 1 cut(s) 190
BsnI GGCC 6 cut(s) 74, 559, 1184, 1235, 1611, 1638
BsoBI CYCGRG 1 cut(s) 1681
Bsp1286I GDGCHC 8 cut(s) 390, 522, 657, 1258, 1384, 1520, 1550, 1680
Bsp143I GATC 6 cut(s) 42, 343, 415, 642, 973, 1051
Bsp19I CCATGG 1 cut(s) 658
BspACI CCGC 4 cut(s) 29, 497, 1021, 1223
BspANI GGCC 6 cut(s) 74, 559, 1184, 1235, 1611, 1638
BspCNI CTCAG 5 cut(s) 38, 475, 553, 594, 691
BspHI TCATGA 2 cut(s) 532, 1068
BspLI GGNNCC 9 cut(s) 315, 345, 387, 417, 447, 684, 1456, 1631, 1639
BspMAI CTGCAG 2 cut(s) 1410, 1525
BspMI ACCTGC 1 cut(s) 1472
BspPI GGATC 6 cut(s) 338, 351, 410, 423, 637, 981
BsrDI GCAATG 2 cut(s) 714, 1081
BsrFI RCCGGY 1 cut(s) 1250
BsrI ACTGG 6 cut(s) 778, 895, 945, 1339, 1559, 1591
BssAI RCCGGY 1 cut(s) 1250
BssECI CCNNGG 9 cut(s) 360, 432, 433, 554, 658, 1624, 1625, 1633, 1680
BssMI GATC 6 cut(s) 42, 343, 415, 642, 973, 1051
BssNI GRCGYC 1 cut(s) 102
BssT1I CCWWGG 1 cut(s) 658
Bst2UI CCWGG 6 cut(s) 127, 362, 434, 749, 1626, 1635
Bst4CI ACNGT 3 cut(s) 512, 1314, 1671
Bst6I CTCTTC 1 cut(s) 119
BstACI GRCGYC 1 cut(s) 102
BstBAI YACGTR 1 cut(s) 724
BstC8I GCNNGC 4 cut(s) 675, 1005, 1047, 1374
BstDEI CTNAG 7 cut(s) 25, 462, 561, 602, 678, 1215, 1755
BstDSI CCRYGG 1 cut(s) 658
BstENI CCTNNNNNAGG 1 cut(s) 68
BstF5I GGATG 5 cut(s) 595, 718, 967, 1661, 1738
BstKTI GATC 6 cut(s) 45, 346, 418, 645, 976, 1054
BstMAI GTCTC 2 cut(s) 1471, 1503
BstMBI GATC 6 cut(s) 42, 343, 415, 642, 973, 1051
BstMWI GCNNNNNNNGC 3 cut(s) 556, 1029, 1232
BstNI CCWGG 6 cut(s) 127, 362, 434, 749, 1626, 1635
BstNSI RCATGY 1 cut(s) 1514
BstPAI GACNNNNGTC 1 cut(s) 943
BstSCI CCNGG 7 cut(s) 125, 360, 432, 684, 747, 1624, 1633
BstSFI CTRYAG 2 cut(s) 1406, 1521
BstSLI GKGCMC 2 cut(s) 1550, 1680
BstV1I GCAGC 6 cut(s) 941, 1420, 1423, 1490, 1513, 1535
BstV2I GAAGAC 3 cut(s) 261, 471, 1308
BstX2I RGATCY 3 cut(s) 343, 415, 1051
BstXI CCANNNNNNTGG 1 cut(s) 850
BstYI RGATCY 3 cut(s) 343, 415, 1051
BsuRI GGCC 6 cut(s) 74, 559, 1184, 1235, 1611, 1638
BtgI CCRYGG 1 cut(s) 658
BtsCI GGATG 5 cut(s) 595, 718, 967, 1661, 1738
BtsI GCAGTG 2 cut(s) 552, 1548
BtsIMutI CAGTG 3 cut(s) 517, 552, 1548
BveI ACCTGC 1 cut(s) 1472
Cac8I GCNNGC 4 cut(s) 675, 1005, 1047, 1374
CciI TCATGA 2 cut(s) 532, 1068
Cfr10I RCCGGY 1 cut(s) 1250
Cfr13I GGNCC 8 cut(s) 129, 313, 445, 648, 682, 745, 1285, 1637
CpoI CGGWCCG 1 cut(s) 648
CseI GACGC 2 cut(s) 545, 1418
CsiI ACCWGGT 1 cut(s) 125
Csp6I GTAC 4 cut(s) 357, 997, 1647, 1724
CspAI ACCGGT 1 cut(s) 1250
CspI CGGWCCG 1 cut(s) 648
CviAII CATG 5 cut(s) 533, 659, 958, 1069, 1511
CviQI GTAC 4 cut(s) 357, 997, 1647, 1724
DdeI CTNAG 7 cut(s) 25, 462, 561, 602, 678, 1215, 1755
DpnI GATC 6 cut(s) 44, 345, 417, 644, 975, 1053
DpnII GATC 6 cut(s) 42, 343, 415, 642, 973, 1051
EaeI YGGCCR 1 cut(s) 1182
Eam1104I CTCTTC 1 cut(s) 119
EarI CTCTTC 1 cut(s) 119
Ecl136II GAGCTC 4 cut(s) 520, 655, 1382, 1518
Eco130I CCWWGG 1 cut(s) 658
Eco147I AGGCCT 1 cut(s) 74
Eco24I GRGCYC 5 cut(s) 390, 522, 657, 1384, 1520
Eco47I GGWCC 7 cut(s) 129, 313, 445, 648, 682, 745, 1285
Eco53kI GAGCTC 4 cut(s) 520, 655, 1382, 1518
Eco88I CYCGRG 1 cut(s) 1681
EcoICRI GAGCTC 4 cut(s) 520, 655, 1382, 1518
EcoNI CCTNNNNNAGG 1 cut(s) 68
EcoO109I RGGNCCY 5 cut(s) 445, 682, 745, 1285, 1637
EcoRI GAATTC 1 cut(s) 950
EcoRII CCWGG 6 cut(s) 125, 360, 432, 747, 1624, 1633
EcoT14I CCWWGG 1 cut(s) 658
EcoT38I GRGCYC 5 cut(s) 390, 522, 657, 1384, 1520
ErhI CCWWGG 1 cut(s) 658
FaeI CATG 5 cut(s) 536, 662, 961, 1072, 1514
FalI AAGNNNNNCTT 2 cut(s) 59, 91
FaqI GGGAC 1 cut(s) 190
FatI CATG 5 cut(s) 532, 658, 957, 1068, 1510
FblI GTMKAC 2 cut(s) 428, 458
Fnu4HI GCNGC 9 cut(s) 30, 930, 1021, 1224, 1409, 1412, 1479, 1524, 1527
FokI GGATG 5 cut(s) 602, 725, 974, 1648, 1725
FriOI GRGCYC 5 cut(s) 390, 522, 657, 1384, 1520
Fsp4HI GCNGC 9 cut(s) 30, 930, 1021, 1224, 1409, 1412, 1479, 1524, 1527
FspBI CTAG 2 cut(s) 200, 1644
GluI GCNGC 9 cut(s) 30, 930, 1021, 1224, 1409, 1412, 1479, 1524, 1527
GsaI CCCAGC 1 cut(s) 1392
GsuI CTGGAG 1 cut(s) 1542
HaeIII GGCC 6 cut(s) 74, 559, 1184, 1235, 1611, 1638
HapII CCGG 5 cut(s) 505, 634, 646, 686, 1251
HgaI GACGC 2 cut(s) 545, 1418
Hin1I GRCGYC 1 cut(s) 102
Hin1II CATG 5 cut(s) 536, 662, 961, 1072, 1514
HincII GTYRAC 2 cut(s) 429, 459
HindII GTYRAC 2 cut(s) 429, 459
HindIII AAGCTT 1 cut(s) 1043
HpaII CCGG 5 cut(s) 505, 634, 646, 686, 1251
HphI GGTGA 4 cut(s) 115, 142, 749, 841
Hpy166II GTNNAC 4 cut(s) 357, 429, 459, 1724
Hpy188III TCNNGA 4 cut(s) 533, 680, 1069, 1322
Hpy8I GTNNAC 4 cut(s) 357, 429, 459, 1724
Hpy99I CGWCG 3 cut(s) 10, 83, 104
HpyCH4III ACNGT 3 cut(s) 512, 1314, 1671
HpyCH4IV ACGT 2 cut(s) 102, 723
HpyF10VI GCNNNNNNNGC 3 cut(s) 556, 1029, 1232
HpyF3I CTNAG 7 cut(s) 25, 462, 561, 602, 678, 1215, 1755
HpySE526I ACGT 2 cut(s) 102, 723
Hsp92I GRCGYC 1 cut(s) 102
Hsp92II CATG 5 cut(s) 536, 662, 961, 1072, 1514
Kzo9I GATC 6 cut(s) 42, 343, 415, 642, 973, 1051
Lsp1109I GCAGC 6 cut(s) 941, 1420, 1423, 1490, 1513, 1535
LweI GCATC 2 cut(s) 532, 580
MabI ACCWGGT 1 cut(s) 125
MaeI CTAG 2 cut(s) 200, 1644
MaeII ACGT 2 cut(s) 102, 723
MaeIII GTNAC 1 cut(s) 1421
MalI GATC 6 cut(s) 44, 345, 417, 644, 975, 1053
MboI GATC 6 cut(s) 42, 343, 415, 642, 973, 1051
MboII GAAGA 7 cut(s) 106, 216, 261, 471, 474, 477, 1308
MfeI CAATTG 1 cut(s) 594
MflI RGATCY 3 cut(s) 343, 415, 1051
MhlI GDGCHC 8 cut(s) 390, 522, 657, 1258, 1384, 1520, 1550, 1680
MlsI TGGCCA 1 cut(s) 1184
MluNI TGGCCA 1 cut(s) 1184
MlyI GAGTC 7 cut(s) 212, 296, 368, 454, 485, 1178, 1505
MmeI TCCRAC 5 cut(s) 123, 156, 208, 768, 1323
Mox20I TGGCCA 1 cut(s) 1184
MroXI GAANNNNTTC 1 cut(s) 74
MscI TGGCCA 1 cut(s) 1184
MseI TTAA 2 cut(s) 1151, 1272
MslI CAYNNNNRTG 1 cut(s) 859
Msp20I TGGCCA 1 cut(s) 1184
MspA1I CMGCKG 2 cut(s) 29, 1526
MspI CCGG 5 cut(s) 505, 634, 646, 686, 1251
MspR9I CCNGG 7 cut(s) 127, 362, 434, 686, 749, 1626, 1635
MunI CAATTG 1 cut(s) 594
MvaI CCWGG 6 cut(s) 127, 362, 434, 749, 1626, 1635
MwoI GCNNNNNNNGC 3 cut(s) 556, 1029, 1232
NciI CCSGG 1 cut(s) 686
NcoI CCATGG 1 cut(s) 658
NdeII GATC 6 cut(s) 42, 343, 415, 642, 973, 1051
NlaIII CATG 5 cut(s) 536, 662, 961, 1072, 1514
NlaIV GGNNCC 9 cut(s) 315, 345, 387, 417, 447, 684, 1456, 1631, 1639
NmeAIII GCCGAG 2 cut(s) 525, 535
NspI RCATGY 1 cut(s) 1514
PagI TCATGA 2 cut(s) 532, 1068
PasI CCCWGGG 2 cut(s) 433, 1625
PceI AGGCCT 1 cut(s) 74
PciI ACATGT 1 cut(s) 1510
PdmI GAANNNNTTC 1 cut(s) 74
PfeI GAWTC 3 cut(s) 140, 912, 1057
PinAI ACCGGT 1 cut(s) 1250
PkrI GCNGC 9 cut(s) 31, 931, 1022, 1225, 1410, 1413, 1480, 1525, 1528
PleI GAGTC 7 cut(s) 211, 296, 368, 454, 484, 1177, 1504
PpsI GAGTC 7 cut(s) 211, 296, 368, 454, 484, 1177, 1504
Ppu21I YACGTR 1 cut(s) 724
PpuMI RGGWCCY 4 cut(s) 445, 682, 745, 1285
PscI ACATGT 1 cut(s) 1510
PshAI GACNNNNGTC 1 cut(s) 943
Psp124BI GAGCTC 4 cut(s) 522, 657, 1384, 1520
Psp5II RGGWCCY 4 cut(s) 445, 682, 745, 1285
Psp6I CCWGG 6 cut(s) 125, 360, 432, 747, 1624, 1633
PspFI CCCAGC 1 cut(s) 1388
PspGI CCWGG 6 cut(s) 125, 360, 432, 747, 1624, 1633
PspN4I GGNNCC 9 cut(s) 315, 345, 387, 417, 447, 684, 1456, 1631, 1639
PspPI GGNCC 8 cut(s) 129, 313, 445, 648, 682, 745, 1285, 1637
PspPPI RGGWCCY 4 cut(s) 445, 682, 745, 1285
PstI CTGCAG 2 cut(s) 1410, 1525
PsuI RGATCY 3 cut(s) 343, 415, 1051
PvuII CAGCTG 1 cut(s) 1526
RsaI GTAC 4 cut(s) 358, 998, 1648, 1725
RsaNI GTAC 4 cut(s) 357, 997, 1647, 1724
RseI CAYNNNNRTG 1 cut(s) 859
Rsr2I CGGWCCG 1 cut(s) 648
RsrII CGGWCCG 1 cut(s) 648
SacI GAGCTC 4 cut(s) 522, 657, 1384, 1520
SalI GTCGAC 2 cut(s) 427, 457
SaqAI TTAA 2 cut(s) 1151, 1272
SatI GCNGC 9 cut(s) 30, 930, 1021, 1224, 1409, 1412, 1479, 1524, 1527
Sau3AI GATC 6 cut(s) 42, 343, 415, 642, 973, 1051
Sau96I GGNCC 8 cut(s) 129, 313, 445, 648, 682, 745, 1285, 1637
SchI GAGTC 7 cut(s) 212, 296, 368, 454, 485, 1178, 1505
ScrFI CCNGG 7 cut(s) 127, 362, 434, 686, 749, 1626, 1635
SduI GDGCHC 8 cut(s) 390, 522, 657, 1258, 1384, 1520, 1550, 1680
SexAI ACCWGGT 1 cut(s) 125
SfaNI GCATC 2 cut(s) 532, 580
SfcI CTRYAG 2 cut(s) 1406, 1521
SinI GGWCC 7 cut(s) 129, 313, 445, 648, 682, 745, 1285
SmiMI CAYNNNNRTG 1 cut(s) 859
SmlI CTYRAG 1 cut(s) 1289
SmoI CTYRAG 1 cut(s) 1289
SseBI AGGCCT 1 cut(s) 74
SsiI CCGC 4 cut(s) 29, 497, 1021, 1223
SspMI CTAG 2 cut(s) 200, 1644
SstI GAGCTC 4 cut(s) 522, 657, 1384, 1520
StuI AGGCCT 1 cut(s) 74
StyD4I CCNGG 7 cut(s) 125, 360, 432, 684, 747, 1624, 1633
StyI CCWWGG 1 cut(s) 658
TaaI ACNGT 3 cut(s) 512, 1314, 1671
TaiI ACGT 2 cut(s) 105, 726
TaqI TCGA 7 cut(s) 45, 78, 138, 275, 428, 458, 1435
TauI GCSGC 3 cut(s) 32, 1023, 1226
TfiI GAWTC 3 cut(s) 140, 912, 1057
Tru1I TTAA 2 cut(s) 1151, 1272
Tru9I TTAA 2 cut(s) 1151, 1272
TscAI CASTG 3 cut(s) 517, 552, 1555
TseI GCWGC 6 cut(s) 929, 1408, 1411, 1478, 1523, 1526
TspDTI ATGAA 5 cut(s) 261, 477, 629, 1093, 1569
TspRI CASTG 3 cut(s) 517, 552, 1555
VpaK11BI GGWCC 7 cut(s) 129, 313, 445, 648, 682, 745, 1285
XagI CCTNNNNNAGG 1 cut(s) 68
XapI RAATTY 6 cut(s) 277, 349, 421, 451, 950, 1112
XceI RCATGY 1 cut(s) 1514
XmiI GTMKAC 2 cut(s) 428, 458
XmnI GAANNNNTTC 1 cut(s) 74
XspI CTAG 2 cut(s) 200, 1644
ZraI GACGTC 1 cut(s) 103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.