Rorug05G0202700

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0013187
Physical Location & Seq
Forward (+)
20144114 .. 20156312
12199 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0202700.1

Sequence Viewer

Length: 2838 bp
ATGGCTTCCGAGTCAAAGCCTCAAGAAGAAGCTGATGAAGACAGGATCAGCAAACTGCCAGATGATGTTCTTTGTCATATTCTTTCATTACTTGATACACATGAAGTGGTGCGTACAACTATCCTGTCAAAAAAATGGAACAACTTCTGGACTTCACTTCCAAATCTTGAATTCTATGACAAATATTTCCCTACATCATATTCATGGCTCGAATATGAATGTGATCCTTTTATGACGTTTGTTGATCGTGTAATGCTTCTTCATGACTCAAAAGACATCCGAAAATTCTCTCTTTCTCGTATGCATAGAGAAGTTGAATTTGTGGTTGAGGATGTATATCATATTCATCGCTGGATTGACGCTGCCATTGAGCATAACATTGTTGAACTTGATCTTTCTCTTGTGGACTGCAAGGGAATGAATTTTTATTTGCCTCAGAGCCTTTACACATGCACAACGCTAGTTGTTTTGAAGGTAGAATCAAATTGTATTTCCTATGATCCTCCCATCACAGGTTGTTTTCCAAGGCTTAAGGTGCTTGTTGTTTCATTTACGAATCCTGATAGTCCTGATCCAGTTAGGAGACTCTTTTCTTGTTGCCCTGTACTCGAAGATCTAGCTATATATGGATATCCTGGAAGAGATGCTTTGGATATTACTATCTCTGCACCTGAATTGAAGACATTAAAGATACATTTGAGCTGCAATGAATATTATATGTATGACCCTGCATACACTTTTAATATTGATGCCCCAAAGCTGGAAAACTTCAGTCTCAAGGATCCTTGGTTTCTTTCAAACTATCATTTGGAGAATAGAAATTCTTTAGTTAAAGCTAAAATTGTACTCAACGACTCAGAGGATTATGATCCTATCGACTTTGCTGATCGTACAACTGCCTTACTAGGAAGAATTTCAAATGTTGAATGCTTGTCTTTTTCAGCTGCATTTCTGGAGGATTTTCATCTTTCCACTTTTGATACTCTGTACCAATTGGAGCTGAGTCTTGGTGGTTGCAATAACTGGGAATTGCTAATAGAGTTTCTCAAGAAATCTCCAAATCTGAAACATCTCGTCTTAAAAAATAAGGGCCGTTTACCATATTTTGAATTAGATGAGCTTGAAAGTAATCTGGTTAGTCCACCAGTGTCACCAAATTGTTTGCTTTCATCCCTAGAGACTATCTCTATTAAGCAATTCACGGGACAGCAGGATGAGATGGAAGTGGCAGAATATTTGTTAAAGAACGGTGAGGTGTTGAAAACAATGAAGATCTATATTATGAATCCTAGATCTACAGGTGAGCCTACAAAAGAAGAGTTATCCAATAAACTTTTAATGTATGAAAAGGGTTCAAAAACTTGTCAAGTTGAAGTTATCTATGATGAAAATTGGACGAAGTATACTAATGTTATAAGCTGTAGTGAGATAAGGGAATCGGTTGAGAAGTATAAGAGACTTTCAAACGATTTGATGTCAGAGGTTCAAGCAAAAAGAGTTAATAAAGATAGGATCAGTGCACTACCAGATGAAGTCCTTTATCACATCCTTTCGTTCCTTAAAACCGAAGATGTTGTGATGACCATCTTTTTGTCTAGAAGATGGAAGAACATTTGGGCCTCTGTTCCGAGTCTAGATTTCTGTGACCAAGAAAACCCTGACACTATTCCTTTTTCGAGGTTTATTGATAATGTACTCTTCTTCCGTGACTCAACAGACATTCATAAGTTTCGTCTCCATTCCATTAGTGTTGAGGATTTTGATCGTATTTGTGGTTGGATTGGCGCTGCCATTAGGCGCAATGTTGTTGAACTTGATCTTTCTGTTAAGTATTATGGAGGTGATGAGGATCACCAGCAGATCTTTAAGTTGCCTAAGAGTGTTTTCACATGTAAAACTCTGAGGGTTTTGAAATTGTGGTCAAATTTTATTATCAATGCTCCTGAATCAGGGTGTTTCCCGAATCTCAAATCTCTCTGTGTTCATTTTGATCTTCCTGTTAATAACTCAATGGAGAAACTTTTTTCTTGCTGCCCTGTGCTGGAAGATTTGAGCATACATGGAAATCATGGATTTTATGGTTTGAATTTCACCGTATCTGCACCTGAACTGAAGACACTGAAAGTAGAATGGACGACGCATGGTGATTATGAGAGGTGCAACTTTTATGTTGTTGCCCCAAAGCTTGAAAATTTTCATCTCTGGCAGTATCCTTCAACAGACTGTTTTTTGGAGAATGCAAAATCTCTAGTCAGAGTTACTATTTCTCTACAAGACCACTTTGCCGATGAAGACCGTCTCTTTGCTATCCGTGGAACTGCGCTTCTGGCAGTAATTTCCAATGTTAGATACTTGTCTCTTTCAGCACATTGTTTGAAAGGGTGTTGTCTTCCTGTCTTTGATAAGTTGAGCCGATTGGAGCTTGCTCTCTACAGTTGCTATTACTGGAAACTGCTAAAAGAGCTTCTCAGGAGATCACCTAAACTGGAATATCTTGTCTTAGAGCTGAAAGACTTCATATGCTCCACGGCACCTTCGAGTCATCAATGGAGTCCACCAGAGTCGATACCTATCTGTTTGTTGACGCATCTCAAGACTGTCTCTATAAGGGGATTCAAGGGAAAACTGGATGAGATGGATGTGGCAAAGTATTTGTTAAACAACGGTGAAGTTTTGAAGAAGATGACTTTTTATAGTGAGGATCTTTTGCGTACCAAAGAGGAGTTAAAAATGGAGCTGTCAATGTGTCATTGGGGTTCAAAGACTTGCCAAGTTGAATTTTTCCCGGACCAAAAAGACGAAGGCTTGTCATTTTTAGGTATGCGTTCTTGGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009791 GO:0010228 GO:0022414 GO:0032501 GO:0032502 GO:0048608 GO:0048731 GO:0048856 GO:0061458
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

945

Amino Acids

109.41

Weight (kDa)

5.42

Isoelectric Point (pI)

44.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 56 4.2e-09 F-box domain
LRR_At1g61320_AtMIF1 PF23622 86 - 428 4.2e-10 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 116 - 273 6.4e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 385 - 425 2.9e-14 FBD
F-box PF00646 505 - 544 1.3e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 574 - 899 7.1e-11 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 592 - 738 8.3e-14 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 853 - 897 1.3e-15 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013187)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31814 AT5G16320
fragaria_vesca FvH4_3g24000
malus_domestica MD11G1205100.v1.1
prunus_persica Prupe.4G232500_v2.0.a1
pyrus_communis pycom11g17780
rosa_chinensis RchiOBHm_Chr5g0042571
rosa_laevigata RLG00000034141
rosa_multiflora Rmu_sc0004704.1_g000003
rosa_roxburghii Rroxscaffold_1G00038070
rosa_rugosa Rorug05G0202600 Rorug05G0202700 Rorug05G0202800
rosa_samantha Rh5AG287800 Rh5BG292200 Rh5CG324600 Rh5DG302000
rosa_wichuraiana Rw5G026720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1415
AccB1I GGYRCC 1 cut(s) 2530
AccI GTMKAC 1 cut(s) 1403
AcuI CTGAAG 2 cut(s) 754, 2132
AfaI GTAC 7 cut(s) 115, 606, 846, 892, 989, 1695, 2713
AfiI CCNNNNNNNGG 4 cut(s) 512, 760, 1949, 2041
AflII CTTAAG 1 cut(s) 530
AflIII ACRYGT 1 cut(s) 1889
AjnI CCWGG 1 cut(s) 634
Alw21I GWGCWC 1 cut(s) 1522
Alw26I GTCTC 8 cut(s) 577, 779, 1172, 1450, 1739, 2303, 2361, 2605
Alw44I GTGCAC 1 cut(s) 1518
AoxI GGCC 2 cut(s) 1090, 1617
ApaLI GTGCAC 1 cut(s) 1518
ApeKI GCWGC 5 cut(s) 362, 702, 944, 1787, 2031
ArsI GACNNNNNNTTYG 4 cut(s) 1573, 1605, 2285, 2317
Asp700I GAANNNNTTC 4 cut(s) 143, 913, 2193, 2513
AspLEI GCGC 3 cut(s) 1787, 1800, 2323
AspS9I GGNCC 3 cut(s) 1090, 1617, 2788
AsuC2I CCSGG 1 cut(s) 2786
AsuHPI GGTGA 9 cut(s) 1143, 1262, 1313, 1844, 1853, 2083, 2156, 2469, 2678
AvaII GGWCC 1 cut(s) 2788
BaeGI GKGCMC 1 cut(s) 1522
BamHI GGATCC 1 cut(s) 781
BanI GGYRCC 1 cut(s) 2530
BarI GAAGNNNNNNTAC 2 cut(s) 243, 275
BbsI GAAGAC 5 cut(s) 45, 686, 2120, 2298, 2381
Bbv12I GWGCWC 1 cut(s) 1522
BbvI GCAGC 5 cut(s) 349, 689, 931, 1774, 2018
BccI CCATC 5 cut(s) 515, 1213, 1592, 1596, 2629
BceAI ACGGC 2 cut(s) 1077, 2544
BciT130I CCWGG 1 cut(s) 636
BciVI GTATCC 1 cut(s) 2220
BcnI CCSGG 1 cut(s) 2786
BcoDI GTCTC 8 cut(s) 577, 779, 1172, 1450, 1739, 2303, 2361, 2605
BfaI CTAG 8 cut(s) 461, 617, 905, 1175, 1290, 1596, 1634, 2249
BfmI CTRYAG 3 cut(s) 1296, 1420, 2431
BfoI RGCGCY 1 cut(s) 1788
BfrI CTTAAG 1 cut(s) 530
BfuI GTATCC 1 cut(s) 2220
BglII AGATCT 4 cut(s) 613, 1272, 1292, 1860
BisI GCNGC 5 cut(s) 363, 703, 945, 1788, 2032
BlsI GCNGC 5 cut(s) 364, 704, 946, 1789, 2033
Bme1390I CCNGG 2 cut(s) 636, 2786
Bme18I GGWCC 1 cut(s) 2788
BmgT120I GGNCC 3 cut(s) 1090, 1617, 2788
BmiI GGNNCC 2 cut(s) 783, 2532
BmrFI CCNGG 2 cut(s) 636, 2786
BmrI ACTGGG 1 cut(s) 1033
BmsI GCATC 3 cut(s) 634, 739, 2596
BmuI ACTGGG 1 cut(s) 1033
BpiI GAAGAC 5 cut(s) 45, 686, 2120, 2298, 2381
BplI GAGNNNNNCTC 2 cut(s) 1169, 1201
BpmI CTGGAG 1 cut(s) 974
BpuEI CTTGAG 4 cut(s) 6, 761, 1031, 2576
BpuMI CCSGG 1 cut(s) 2786
BsaBI GATNNNNATC 7 cut(s) 336, 867, 963, 1583, 1761, 1848, 2570
BsaJI CCNNGG 4 cut(s) 524, 785, 2311, 2526
Bsc4I CCNNNNNNNGG 4 cut(s) 512, 760, 1949, 2041
Bse1I ACTGG 6 cut(s) 575, 1028, 1145, 2450, 2490, 2631
Bse3DI GCAATG 2 cut(s) 712, 1807
Bse8I GATNNNNATC 7 cut(s) 336, 867, 963, 1583, 1761, 1848, 2570
BseBI CCWGG 1 cut(s) 636
BseDI CCNNGG 4 cut(s) 524, 785, 2311, 2526
BseGI GGATG 7 cut(s) 276, 337, 1169, 1219, 1545, 2635, 2644
BseJI GATNNNNATC 7 cut(s) 336, 867, 963, 1583, 1761, 1848, 2570
BseLI CCNNNNNNNGG 4 cut(s) 512, 760, 1949, 2041
BseMI GCAATG 2 cut(s) 712, 1807
BseMII CTCAG 5 cut(s) 449, 870, 992, 1892, 2482
BseNI ACTGG 6 cut(s) 575, 1028, 1145, 2450, 2490, 2631
BseRI GAGGAG 1 cut(s) 2735
BseSI GKGCMC 1 cut(s) 1522
BseXI GCAGC 5 cut(s) 349, 689, 931, 1774, 2018
BsgI GTGCAG 2 cut(s) 651, 2085
BshFI GGCC 2 cut(s) 1092, 1619
BshNI GGYRCC 1 cut(s) 2530
BsiHKAI GWGCWC 1 cut(s) 1522
BsiSI CCGG 1 cut(s) 2786
BslFI GGGAC 1 cut(s) 1218
BslI CCNNNNNNNGG 4 cut(s) 512, 760, 1949, 2041
BsmAI GTCTC 8 cut(s) 577, 779, 1172, 1450, 1739, 2303, 2361, 2605
BsmBI CGTCTC 2 cut(s) 1739, 2303
BsmFI GGGAC 1 cut(s) 1218
BsmI GAATGC 2 cut(s) 932, 2242
BsnI GGCC 2 cut(s) 1092, 1619
Bsp1286I GDGCHC 1 cut(s) 1522
BspANI GGCC 2 cut(s) 1092, 1619
BspCNI CTCAG 5 cut(s) 448, 869, 993, 1893, 2481
BspHI TCATGA 1 cut(s) 262
BspLI GGNNCC 2 cut(s) 783, 2532
BspT107I GGYRCC 1 cut(s) 2530
BspTI CTTAAG 1 cut(s) 530
BsrDI GCAATG 2 cut(s) 712, 1807
BsrI ACTGG 6 cut(s) 575, 1028, 1145, 2450, 2490, 2631
BssECI CCNNGG 4 cut(s) 524, 785, 2311, 2526
BssNAI GTATAC 1 cut(s) 1404
BssT1I CCWWGG 2 cut(s) 524, 785
Bst1107I GTATAC 1 cut(s) 1404
Bst2UI CCWGG 1 cut(s) 636
Bst4CI ACNGT 7 cut(s) 1250, 2095, 2225, 2297, 2435, 2599, 2666
Bst6I CTCTTC 3 cut(s) 634, 1311, 1703
BstAFI CTTAAG 1 cut(s) 530
BstC8I GCNNGC 1 cut(s) 2424
BstDEI CTNAG 7 cut(s) 435, 856, 1001, 1875, 1901, 2468, 2500
BstDSI CCRYGG 2 cut(s) 2311, 2526
BstENI CCTNNNNNAGG 1 cut(s) 1947
BstF5I GGATG 7 cut(s) 276, 337, 1169, 1219, 1545, 2635, 2644
BstH2I RGCGCY 1 cut(s) 1788
BstHHI GCGC 3 cut(s) 1787, 1800, 2323
BstMAI GTCTC 8 cut(s) 577, 779, 1172, 1450, 1739, 2303, 2361, 2605
BstMWI GCNNNNNNNGC 3 cut(s) 535, 2327, 2461
BstNI CCWGG 1 cut(s) 636
BstNSI RCATGY 2 cut(s) 453, 1893
BstSCI CCNGG 2 cut(s) 634, 2784
BstSFI CTRYAG 3 cut(s) 1296, 1420, 2431
BstSLI GKGCMC 1 cut(s) 1522
BstV1I GCAGC 5 cut(s) 349, 689, 931, 1774, 2018
BstV2I GAAGAC 5 cut(s) 45, 686, 2120, 2298, 2381
BstX2I RGATCY 6 cut(s) 613, 781, 1272, 1292, 1860, 2701
BstYI RGATCY 6 cut(s) 613, 781, 1272, 1292, 1860, 2701
BstZ17I GTATAC 1 cut(s) 1404
BsuI GTATCC 1 cut(s) 2220
BsuRI GGCC 2 cut(s) 1092, 1619
BtgI CCRYGG 2 cut(s) 2311, 2526
BtgZI GCGATG 1 cut(s) 332
BtsCI GGATG 7 cut(s) 276, 337, 1169, 1219, 1545, 2635, 2644
BtsIMutI CAGTG 3 cut(s) 1152, 1522, 2117
Cac8I GCNNGC 1 cut(s) 2424
CciI TCATGA 1 cut(s) 262
CfoI GCGC 3 cut(s) 1787, 1800, 2323
Cfr13I GGNCC 3 cut(s) 1090, 1617, 2788
CseI GACGC 3 cut(s) 368, 2146, 2593
Csp6I GTAC 7 cut(s) 114, 605, 845, 891, 988, 1694, 2712
CviAII CATG 8 cut(s) 101, 204, 263, 450, 1890, 2060, 2069, 2141
CviQI GTAC 7 cut(s) 114, 605, 845, 891, 988, 1694, 2712
DdeI CTNAG 7 cut(s) 435, 856, 1001, 1875, 1901, 2468, 2500
Eam1104I CTCTTC 3 cut(s) 634, 1311, 1703
EarI CTCTTC 3 cut(s) 634, 1311, 1703
Eco130I CCWWGG 2 cut(s) 524, 785
Eco32I GATATC 1 cut(s) 632
Eco47I GGWCC 1 cut(s) 2788
Eco57I CTGAAG 2 cut(s) 754, 2132
EcoNI CCTNNNNNAGG 1 cut(s) 1947
EcoRI GAATTC 1 cut(s) 170
EcoRII CCWGG 1 cut(s) 634
EcoRV GATATC 1 cut(s) 632
EcoT14I CCWWGG 2 cut(s) 524, 785
EcoT22I ATGCAT 1 cut(s) 306
ErhI CCWWGG 2 cut(s) 524, 785
Esp3I CGTCTC 2 cut(s) 1739, 2303
FaeI CATG 8 cut(s) 104, 207, 266, 453, 1893, 2063, 2072, 2144
FalI AAGNNNNNCTT 2 cut(s) 631, 663
FaqI GGGAC 1 cut(s) 1218
FatI CATG 8 cut(s) 100, 203, 262, 449, 1889, 2059, 2068, 2140
FauNDI CATATG 1 cut(s) 2519
FblI GTMKAC 1 cut(s) 1403
Fnu4HI GCNGC 5 cut(s) 363, 703, 945, 1788, 2032
FokI GGATG 7 cut(s) 263, 344, 1156, 1226, 1532, 2642, 2651
Fsp4HI GCNGC 5 cut(s) 363, 703, 945, 1788, 2032
FspBI CTAG 8 cut(s) 461, 617, 905, 1175, 1290, 1596, 1634, 2249
GlaI GCGC 3 cut(s) 1786, 1799, 2322
GluI GCNGC 5 cut(s) 363, 703, 945, 1788, 2032
GsuI CTGGAG 1 cut(s) 974
HaeII RGCGCY 1 cut(s) 1788
HaeIII GGCC 2 cut(s) 1092, 1619
HapII CCGG 1 cut(s) 2786
HgaI GACGC 3 cut(s) 368, 2146, 2593
HhaI GCGC 3 cut(s) 1787, 1800, 2323
Hin1II CATG 8 cut(s) 104, 207, 266, 453, 1893, 2063, 2072, 2144
Hin6I GCGC 3 cut(s) 1785, 1798, 2321
HinP1I GCGC 3 cut(s) 1785, 1798, 2321
HincII GTYRAC 1 cut(s) 2583
HindII GTYRAC 1 cut(s) 2583
HindIII AAGCTT 1 cut(s) 2183
HpaII CCGG 1 cut(s) 2786
HphI GGTGA 9 cut(s) 1143, 1262, 1313, 1844, 1853, 2083, 2156, 2469, 2678
Hpy166II GTNNAC 7 cut(s) 406, 1097, 1142, 1404, 1520, 2555, 2583
Hpy188I TCNGA 9 cut(s) 10, 281, 438, 859, 1065, 1480, 1629, 1902, 2255
Hpy8I GTNNAC 7 cut(s) 406, 1097, 1142, 1404, 1520, 2555, 2583
Hpy99I CGWCG 1 cut(s) 2140
HpyAV CCTTC 4 cut(s) 466, 2223, 2544, 2795
HpyCH4III ACNGT 7 cut(s) 1250, 2095, 2225, 2297, 2435, 2599, 2666
HpyCH4IV ACGT 1 cut(s) 236
HpyF10VI GCNNNNNNNGC 3 cut(s) 535, 2327, 2461
HpyF3I CTNAG 7 cut(s) 435, 856, 1001, 1875, 1901, 2468, 2500
HpySE526I ACGT 1 cut(s) 236
Hsp92II CATG 8 cut(s) 104, 207, 266, 453, 1893, 2063, 2072, 2144
HspAI GCGC 3 cut(s) 1785, 1798, 2321
LmnI GCTCC 5 cut(s) 997, 1945, 2419, 2528, 2734
Lsp1109I GCAGC 5 cut(s) 349, 689, 931, 1774, 2018
LweI GCATC 3 cut(s) 634, 739, 2596
MaeI CTAG 8 cut(s) 461, 617, 905, 1175, 1290, 1596, 1634, 2249
MaeII ACGT 1 cut(s) 236
MaeIII GTNAC 4 cut(s) 1149, 1643, 1706, 2257
MfeI CAATTG 1 cut(s) 992
MflI RGATCY 6 cut(s) 613, 781, 1272, 1292, 1860, 2701
MhlI GDGCHC 1 cut(s) 1522
MmeI TCCRAC 1 cut(s) 1757
Mph1103I ATGCAT 1 cut(s) 306
MroXI GAANNNNTTC 4 cut(s) 143, 913, 2193, 2513
MslI CAYNNNNRTG 1 cut(s) 202
MspA1I CMGCKG 1 cut(s) 944
MspCI CTTAAG 1 cut(s) 530
MspI CCGG 1 cut(s) 2786
MspR9I CCNGG 2 cut(s) 636, 2786
MunI CAATTG 1 cut(s) 992
Mva1269I GAATGC 2 cut(s) 932, 2242
MvaI CCWGG 1 cut(s) 636
MwoI GCNNNNNNNGC 3 cut(s) 535, 2327, 2461
NciI CCSGG 1 cut(s) 2786
NdeI CATATG 1 cut(s) 2519
NlaIII CATG 8 cut(s) 104, 207, 266, 453, 1893, 2063, 2072, 2144
NlaIV GGNNCC 2 cut(s) 783, 2532
NmuCI GTSAC 3 cut(s) 1149, 1643, 1706
NsiI ATGCAT 1 cut(s) 306
NspI RCATGY 2 cut(s) 453, 1893
PagI TCATGA 1 cut(s) 262
PciI ACATGT 1 cut(s) 1889
PcsI WCGNNNNNNNCGW 1 cut(s) 2534
PctI GAATGC 2 cut(s) 932, 2242
PdmI GAANNNNTTC 4 cut(s) 143, 913, 2193, 2513
PfeI GAWTC 7 cut(s) 479, 556, 1285, 1436, 1946, 1963, 2613
PfoI TCCNGGA 2 cut(s) 634, 2784
PkrI GCNGC 5 cut(s) 364, 704, 946, 1789, 2033
PscI ACATGT 1 cut(s) 1889
PsiI TTATAA 1 cut(s) 1415
Psp6I CCWGG 1 cut(s) 634
PspGI CCWGG 1 cut(s) 634
PspN4I GGNNCC 2 cut(s) 783, 2532
PspPI GGNCC 3 cut(s) 1090, 1617, 2788
PsuI RGATCY 6 cut(s) 613, 781, 1272, 1292, 1860, 2701
PvuII CAGCTG 1 cut(s) 944
RsaI GTAC 7 cut(s) 115, 606, 846, 892, 989, 1695, 2713
RsaNI GTAC 7 cut(s) 114, 605, 845, 891, 988, 1694, 2712
RseI CAYNNNNRTG 1 cut(s) 202
SatI GCNGC 5 cut(s) 363, 703, 945, 1788, 2032
Sau96I GGNCC 3 cut(s) 1090, 1617, 2788
ScrFI CCNGG 2 cut(s) 636, 2786
SduI GDGCHC 1 cut(s) 1522
SfaNI GCATC 3 cut(s) 634, 739, 2596
SfcI CTRYAG 3 cut(s) 1296, 1420, 2431
SinI GGWCC 1 cut(s) 2788
SmiMI CAYNNNNRTG 1 cut(s) 202
SmlI CTYRAG 5 cut(s) 21, 530, 776, 1046, 2591
SmoI CTYRAG 5 cut(s) 21, 530, 776, 1046, 2591
SspI AATATT 4 cut(s) 185, 713, 745, 1235
SspMI CTAG 8 cut(s) 461, 617, 905, 1175, 1290, 1596, 1634, 2249
StyD4I CCNGG 2 cut(s) 634, 2784
StyI CCWWGG 2 cut(s) 524, 785
TaaI ACNGT 7 cut(s) 1250, 2095, 2225, 2297, 2435, 2599, 2666
TaiI ACGT 1 cut(s) 239
TaqI TCGA 6 cut(s) 210, 609, 876, 1676, 2537, 2564
TatI WGTACW 3 cut(s) 604, 844, 1693
TfiI GAWTC 7 cut(s) 479, 556, 1285, 1436, 1946, 1963, 2613
TscAI CASTG 3 cut(s) 1152, 1522, 2124
TseFI GTSAC 3 cut(s) 1149, 1643, 1706
TseI GCWGC 5 cut(s) 362, 702, 944, 1787, 2031
Tsp45I GTSAC 3 cut(s) 1149, 1643, 1706
TspGWI ACGGA 2 cut(s) 1694, 2300
TspRI CASTG 3 cut(s) 1152, 1522, 2124
Vha464I CTTAAG 1 cut(s) 530
VneI GTGCAC 1 cut(s) 1518
VpaK11BI GGWCC 1 cut(s) 2788
XagI CCTNNNNNAGG 1 cut(s) 1947
XbaI TCTAGA 2 cut(s) 1595, 1633
XceI RCATGY 2 cut(s) 453, 1893
XmiI GTMKAC 1 cut(s) 1403
XmnI GAANNNNTTC 4 cut(s) 143, 913, 2193, 2513
XspI CTAG 8 cut(s) 461, 617, 905, 1175, 1290, 1596, 1634, 2249
Zsp2I ATGCAT 1 cut(s) 306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.