Rroxscaffold_1G00038070

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0013187
Physical Location & Seq
Reverse (-)
55449127 .. 55453471
4345 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00038070.1

Sequence Viewer

Length: 1764 bp
ATGGCGACGACAGCGGAAACAATCTCAGCGGCTATGCAACTGATCGACCCAAAGAAAGAGAACCTAAAGAAGGCCTTCGACGACCTTCAATCCCAGTCCGACGTCCTCTCTCTCTTCTCTCTCACCTGGTCCGACCTCGATTCCCATTTCACCTCCCTCCAAAACTCCCTTTCCCAAAAACTCCAACTCCTCCAAACCCTAGAGTCCCAATCCCCAAACCCTTCTTCCTCTGCCCCAATCCCACATACCCAGATAACCCAAGACCCGTCTTCATCGAATTTACAGACCCAGATACCAAAGGACTCATCTTTGGACCCCAAAGCACCAACCCAGATGGCAAAGGATCCGAATTTGTCGACCCAGGTAGGAAAGGGCTCATTTTTGGAGCCCAAAGCACCAACCCAGGTAGCAAAGGATCCGAATTTGTCGACCCAGGGAGCAAAGGACCCGAATTTGTCGACTCAGGTAGCAAAAGAGTCTTCTTCTTCTTCATTGAACCCTCCGAGCCGGAACAGTGTTGAGCTCAACAATGGTCATGATGCAGATGCAGTGCCTCCTCGGCCTGAGTTGGTGGCGTTTTGTGAGAAAATGGATGCAATTGGGCTGAGGAAGTATATGAATGACACTAAAAATAACCGGAACACGATCCGGTCCGAGCTCCATGGGGCTTTACGGCACGCTCAGGACCCGGCATTGATGGTTCTCAATGCAATGGAGGGGTTTTTCGTGGAGAATAAGGGTGATAAGGACCTGGAAGTGAGTAGTGTGAGGAGAACTGGTGTGCTGTTGTTGGAAGTGTTGTGTGGAGTTTCGCCAAATGTAGGAGTGGAGGTGAGGGAGAGAGCCAAGAAGTTGGCATTGGAGTGGAAAGGGAAGGTTAGTATGGAGGGAGAGAACCAGTTTGAGGCATTGGGATTCTTGCATTTGGTGGCAGCTTATGGACTGGTGTCGGAATTCAACATGGATGAGCTTGTGGATCATTTGGTTGTTGTTGCAAGGTATAGGCAAGCTACTGATTTGTGCCGCAGACTTGGCTTGGGAGATAAGCTTGCAGATCTGATTCAGAAACTCATCAGCAATGGCAAACATCTTTTGGCTATCAAGTTCATTTCTGAATTTGATATGACTGATAAGTTTCCACCTGTTCCCATCTTAAAAGCATATGTAAAGGAGTCTAAAAGGTTGGCCAAGAAAGTTTGTGAGGAAGGAAATAACTCTAAGAAGGCGGCGAATGAGGCCATAGCCAAAGAAACCGGTGCTCTGAAATCAGTAATTAAAATTATTGAGGACCTCAAGCTCGAATCTGAATATCCACCGTCTTCTCTTGAAAAGCGAATTGACCAGTTGGAGAAGGAGAAGGCAAACAGAAAACGGCAAGCAGGAGCTCCTGCTGGGAAACCTTTTCAACTGCAGCAACAGTATGGTAACAAGCGTCCTCGAATGACTGCTCCTGTTGGCTCCACAGCAGTCTCAAATGGTGCCGCAGGTTTGTTGGTAGAGTCTCCAGCTCCATATGTGAGCTCTGCAGCTGCACCCTATGTTGTGTCGGGCACTGCCCCTCCAGTTGCCCCTTATGTGGGTTCATCAACTGGGCAGTATGGTTTTGCAGGAGGCCAGATGGGTTTTCCTGGGAACCCAGGCCCCTCTAGTACCCATTTATACACATCCGAACAGTTTGTGCCCTCGGGCTATTACAACAGGCTAACTGCCTATGGTGGATATGGTGTACCCCCTCAATACCATCCATCTTACTATTCTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009791 GO:0010228 GO:0022414 GO:0032501 GO:0032502 GO:0048608 GO:0048731 GO:0048856 GO:0061458
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

587

Amino Acids

63.7

Weight (kDa)

8.08

Isoelectric Point (pI)

42.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 184 - 460 3.1e-101 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013187)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31814 AT5G16320
fragaria_vesca FvH4_3g24000
malus_domestica MD11G1205100.v1.1
prunus_persica Prupe.4G232500_v2.0.a1
pyrus_communis pycom11g17780
rosa_chinensis RchiOBHm_Chr5g0042571
rosa_laevigata RLG00000034141
rosa_multiflora Rmu_sc0004704.1_g000003
rosa_roxburghii Rroxscaffold_1G00038070
rosa_rugosa Rorug05G0202600 Rorug05G0202700 Rorug05G0202800
rosa_samantha Rh5AG287800 Rh5BG292200 Rh5CG324600 Rh5DG302000
rosa_wichuraiana Rw5G026720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 105
Acc36I ACCTGC 1 cut(s) 1475
AccB1I GGYRCC 1 cut(s) 1478
AccI GTMKAC 3 cut(s) 356, 428, 458
AciI CCGC 5 cut(s) 14, 29, 1024, 1226, 1482
AclWI GGATC 6 cut(s) 338, 351, 410, 423, 640, 984
AcoI YGGCCR 1 cut(s) 1185
AcsI RAATTY 6 cut(s) 277, 349, 421, 451, 953, 1115
AcyI GRCGYC 1 cut(s) 102
AfaI GTAC 2 cut(s) 1651, 1728
AfiI CCNNNNNNNGG 5 cut(s) 70, 821, 904, 1576, 1577
AgeI ACCGGT 1 cut(s) 1253
AgsI TTSAA 5 cut(s) 89, 496, 958, 1328, 1406
AjnI CCWGG 7 cut(s) 125, 360, 402, 432, 750, 1627, 1636
AjuI GAANNNNNNNTTGG 4 cut(s) 208, 240, 842, 874
Alw21I GWGCWC 5 cut(s) 525, 660, 1261, 1387, 1523
Alw26I GTCTC 2 cut(s) 1474, 1506
AlwI GGATC 6 cut(s) 338, 351, 410, 423, 640, 984
Ama87I CYCGRG 1 cut(s) 1684
AoxI GGCC 6 cut(s) 72, 560, 1185, 1236, 1612, 1639
ApeKI GCWGC 4 cut(s) 932, 1411, 1526, 1529
ApoI RAATTY 6 cut(s) 277, 349, 421, 451, 953, 1115
AsiGI ACCGGT 1 cut(s) 1253
Asp700I GAANNNNTTC 1 cut(s) 74
AspS9I GGNCC 8 cut(s) 129, 313, 445, 651, 685, 748, 1288, 1640
AsuC2I CCSGG 1 cut(s) 689
AsuHPI GGTGA 4 cut(s) 115, 142, 752, 844
AvaI CYCGRG 1 cut(s) 1684
AvaII GGWCC 7 cut(s) 129, 313, 445, 651, 685, 748, 1288
BaeGI GKGCMC 2 cut(s) 1553, 1683
BalI TGGCCA 1 cut(s) 1187
BamHI GGATCC 2 cut(s) 343, 415
BanI GGYRCC 1 cut(s) 1478
BanII GRGCYC 6 cut(s) 377, 390, 525, 660, 1387, 1523
BbsI GAAGAC 3 cut(s) 261, 471, 1311
Bbv12I GWGCWC 5 cut(s) 525, 660, 1261, 1387, 1523
BbvCI CCTCAGC 1 cut(s) 605
BbvI GCAGC 4 cut(s) 944, 1423, 1516, 1538
BccI CCATC 6 cut(s) 328, 691, 1157, 1612, 1749, 1753
BceAI ACGGC 2 cut(s) 689, 1388
BciT130I CCWGG 7 cut(s) 127, 362, 404, 434, 752, 1629, 1638
BcnI CCSGG 1 cut(s) 689
BcoDI GTCTC 2 cut(s) 1474, 1506
BfaI CTAG 2 cut(s) 200, 1647
BfmI CTRYAG 2 cut(s) 1409, 1524
BfuAI ACCTGC 1 cut(s) 1475
BglI GCCNNNNNGGC 1 cut(s) 559
BglII AGATCT 1 cut(s) 1054
BisI GCNGC 8 cut(s) 30, 933, 1024, 1227, 1412, 1482, 1527, 1530
BlsI GCNGC 8 cut(s) 31, 934, 1025, 1228, 1413, 1483, 1528, 1531
Bme1390I CCNGG 8 cut(s) 127, 362, 404, 434, 689, 752, 1629, 1638
Bme18I GGWCC 7 cut(s) 129, 313, 445, 651, 685, 748, 1288
BmeT110I CYCGRG 1 cut(s) 1684
BmgT120I GGNCC 8 cut(s) 129, 313, 445, 651, 685, 748, 1288, 1640
BmrFI CCNGG 8 cut(s) 127, 362, 404, 434, 689, 752, 1629, 1638
BmrI ACTGGG 2 cut(s) 88, 1599
BmsI GCATC 3 cut(s) 529, 535, 583
BmuI ACTGGG 2 cut(s) 88, 1599
BoxI GACNNNNGTC 1 cut(s) 946
BpiI GAAGAC 3 cut(s) 261, 471, 1311
BpmI CTGGAG 2 cut(s) 1488, 1545
Bpu10I CCTNAGC 2 cut(s) 605, 681
BpuEI CTTGAG 1 cut(s) 1277
BpuMI CCSGG 1 cut(s) 689
BsaHI GRCGYC 1 cut(s) 102
BsaJI CCNNGG 9 cut(s) 360, 402, 432, 433, 557, 661, 1628, 1636, 1683
BsaWI WCCGGW 3 cut(s) 636, 648, 1253
BsaXI ACNNNNNCTCC 8 cut(s) 171, 201, 763, 793, 816, 846, 1543, 1573
Bsc4I CCNNNNNNNGG 5 cut(s) 70, 821, 904, 1576, 1577
Bse118I RCCGGY 1 cut(s) 1253
Bse1I ACTGG 7 cut(s) 94, 781, 898, 948, 1342, 1562, 1594
Bse3DI GCAATG 2 cut(s) 717, 1084
BseBI CCWGG 7 cut(s) 127, 362, 404, 434, 752, 1629, 1638
BseDI CCNNGG 9 cut(s) 360, 402, 432, 433, 557, 661, 1628, 1636, 1683
BseGI GGATG 4 cut(s) 598, 970, 1664, 1741
BseLI CCNNNNNNNGG 5 cut(s) 70, 821, 904, 1576, 1577
BseMI GCAATG 2 cut(s) 717, 1084
BseMII CTCAG 5 cut(s) 39, 476, 555, 596, 695
BseNI ACTGG 7 cut(s) 94, 781, 898, 948, 1342, 1562, 1594
BseRI GAGGAG 3 cut(s) 179, 546, 784
BseSI GKGCMC 2 cut(s) 1553, 1683
BseXI GCAGC 4 cut(s) 944, 1423, 1516, 1538
BseYI CCCAGC 1 cut(s) 1391
BsgI GTGCAG 1 cut(s) 1515
BshFI GGCC 6 cut(s) 74, 562, 1187, 1238, 1614, 1641
BshNI GGYRCC 1 cut(s) 1478
BshTI ACCGGT 1 cut(s) 1253
BsiHKAI GWGCWC 5 cut(s) 525, 660, 1261, 1387, 1523
BsiHKCI CYCGRG 1 cut(s) 1684
BsiSI CCGG 5 cut(s) 508, 637, 649, 689, 1254
BslFI GGGAC 1 cut(s) 190
BslI CCNNNNNNNGG 5 cut(s) 70, 821, 904, 1576, 1577
BsmAI GTCTC 2 cut(s) 1474, 1506
BsmFI GGGAC 1 cut(s) 190
BsnI GGCC 6 cut(s) 74, 562, 1187, 1238, 1614, 1641
BsoBI CYCGRG 1 cut(s) 1684
Bsp1286I GDGCHC 9 cut(s) 377, 390, 525, 660, 1261, 1387, 1523, 1553, 1683
Bsp143I GATC 6 cut(s) 42, 343, 415, 645, 976, 1054
Bsp19I CCATGG 1 cut(s) 661
BspACI CCGC 5 cut(s) 14, 29, 1024, 1226, 1482
BspANI GGCC 6 cut(s) 74, 562, 1187, 1238, 1614, 1641
BspCNI CTCAG 5 cut(s) 38, 475, 556, 597, 694
BspHI TCATGA 1 cut(s) 535
BspMAI CTGCAG 2 cut(s) 1413, 1528
BspMI ACCTGC 1 cut(s) 1475
BspPI GGATC 6 cut(s) 338, 351, 410, 423, 640, 984
BspT107I GGYRCC 1 cut(s) 1478
BsrDI GCAATG 2 cut(s) 717, 1084
BsrFI RCCGGY 1 cut(s) 1253
BsrI ACTGG 7 cut(s) 94, 781, 898, 948, 1342, 1562, 1594
BssAI RCCGGY 1 cut(s) 1253
BssECI CCNNGG 9 cut(s) 360, 402, 432, 433, 557, 661, 1628, 1636, 1683
BssMI GATC 6 cut(s) 42, 343, 415, 645, 976, 1054
BssNI GRCGYC 1 cut(s) 102
BssT1I CCWWGG 1 cut(s) 661
Bst2UI CCWGG 7 cut(s) 127, 362, 404, 434, 752, 1629, 1638
Bst4CI ACNGT 4 cut(s) 515, 1317, 1419, 1674
Bst6I CTCTTC 1 cut(s) 119
BstACI GRCGYC 1 cut(s) 102
BstC8I GCNNGC 4 cut(s) 678, 1008, 1050, 1377
BstDEI CTNAG 7 cut(s) 25, 462, 564, 605, 681, 1218, 1758
BstDSI CCRYGG 1 cut(s) 661
BstENI CCTNNNNNAGG 1 cut(s) 68
BstF5I GGATG 4 cut(s) 598, 970, 1664, 1741
BstKTI GATC 6 cut(s) 45, 346, 418, 648, 979, 1057
BstMAI GTCTC 2 cut(s) 1474, 1506
BstMBI GATC 6 cut(s) 42, 343, 415, 645, 976, 1054
BstMWI GCNNNNNNNGC 4 cut(s) 11, 559, 1032, 1235
BstNI CCWGG 7 cut(s) 127, 362, 404, 434, 752, 1629, 1638
BstPAI GACNNNNGTC 1 cut(s) 946
BstSCI CCNGG 8 cut(s) 125, 360, 402, 432, 687, 750, 1627, 1636
BstSFI CTRYAG 2 cut(s) 1409, 1524
BstSLI GKGCMC 2 cut(s) 1553, 1683
BstV1I GCAGC 4 cut(s) 944, 1423, 1516, 1538
BstV2I GAAGAC 3 cut(s) 261, 471, 1311
BstX2I RGATCY 3 cut(s) 343, 415, 1054
BstXI CCANNNNNNTGG 1 cut(s) 853
BstYI RGATCY 3 cut(s) 343, 415, 1054
BsuRI GGCC 6 cut(s) 74, 562, 1187, 1238, 1614, 1641
BtgI CCRYGG 1 cut(s) 661
BtsCI GGATG 4 cut(s) 598, 970, 1664, 1741
BtsI GCAGTG 2 cut(s) 555, 1551
BtsIMutI CAGTG 3 cut(s) 520, 555, 1551
BveI ACCTGC 1 cut(s) 1475
Cac8I GCNNGC 4 cut(s) 678, 1008, 1050, 1377
CciI TCATGA 1 cut(s) 535
Cfr10I RCCGGY 1 cut(s) 1253
Cfr13I GGNCC 8 cut(s) 129, 313, 445, 651, 685, 748, 1288, 1640
CpoI CGGWCCG 1 cut(s) 651
CseI GACGC 1 cut(s) 1421
CsiI ACCWGGT 1 cut(s) 125
Csp6I GTAC 2 cut(s) 1650, 1727
CspAI ACCGGT 1 cut(s) 1253
CspI CGGWCCG 1 cut(s) 651
CviAII CATG 3 cut(s) 536, 662, 961
CviQI GTAC 2 cut(s) 1650, 1727
DdeI CTNAG 7 cut(s) 25, 462, 564, 605, 681, 1218, 1758
DpnI GATC 6 cut(s) 44, 345, 417, 647, 978, 1056
DpnII GATC 6 cut(s) 42, 343, 415, 645, 976, 1054
EaeI YGGCCR 1 cut(s) 1185
Eam1104I CTCTTC 1 cut(s) 119
EarI CTCTTC 1 cut(s) 119
Ecl136II GAGCTC 4 cut(s) 523, 658, 1385, 1521
Eco130I CCWWGG 1 cut(s) 661
Eco147I AGGCCT 1 cut(s) 74
Eco24I GRGCYC 6 cut(s) 377, 390, 525, 660, 1387, 1523
Eco47I GGWCC 7 cut(s) 129, 313, 445, 651, 685, 748, 1288
Eco53kI GAGCTC 4 cut(s) 523, 658, 1385, 1521
Eco88I CYCGRG 1 cut(s) 1684
EcoICRI GAGCTC 4 cut(s) 523, 658, 1385, 1521
EcoNI CCTNNNNNAGG 1 cut(s) 68
EcoO109I RGGNCCY 5 cut(s) 445, 685, 748, 1288, 1640
EcoRI GAATTC 1 cut(s) 953
EcoRII CCWGG 7 cut(s) 125, 360, 402, 432, 750, 1627, 1636
EcoT14I CCWWGG 1 cut(s) 661
EcoT38I GRGCYC 6 cut(s) 377, 390, 525, 660, 1387, 1523
ErhI CCWWGG 1 cut(s) 661
FaeI CATG 3 cut(s) 539, 665, 964
FalI AAGNNNNNCTT 2 cut(s) 59, 91
FaqI GGGAC 1 cut(s) 190
FatI CATG 3 cut(s) 535, 661, 960
FauNDI CATATG 2 cut(s) 1162, 1513
FblI GTMKAC 3 cut(s) 356, 428, 458
Fnu4HI GCNGC 8 cut(s) 30, 933, 1024, 1227, 1412, 1482, 1527, 1530
FokI GGATG 4 cut(s) 605, 977, 1651, 1728
FriOI GRGCYC 6 cut(s) 377, 390, 525, 660, 1387, 1523
Fsp4HI GCNGC 8 cut(s) 30, 933, 1024, 1227, 1412, 1482, 1527, 1530
FspBI CTAG 2 cut(s) 200, 1647
GluI GCNGC 8 cut(s) 30, 933, 1024, 1227, 1412, 1482, 1527, 1530
GsaI CCCAGC 1 cut(s) 1395
GsuI CTGGAG 2 cut(s) 1488, 1545
HaeIII GGCC 6 cut(s) 74, 562, 1187, 1238, 1614, 1641
HapII CCGG 5 cut(s) 508, 637, 649, 689, 1254
HgaI GACGC 1 cut(s) 1421
Hin1I GRCGYC 1 cut(s) 102
Hin1II CATG 3 cut(s) 539, 665, 964
HincII GTYRAC 3 cut(s) 357, 429, 459
HindII GTYRAC 3 cut(s) 357, 429, 459
HindIII AAGCTT 1 cut(s) 1046
HpaII CCGG 5 cut(s) 508, 637, 649, 689, 1254
HphI GGTGA 4 cut(s) 115, 142, 752, 844
Hpy166II GTNNAC 4 cut(s) 357, 429, 459, 1727
Hpy188III TCNNGA 3 cut(s) 536, 683, 1325
Hpy8I GTNNAC 4 cut(s) 357, 429, 459, 1727
Hpy99I CGWCG 3 cut(s) 10, 83, 104
HpyAV CCTTC 9 cut(s) 64, 85, 95, 231, 868, 1199, 1216, 1345, 1351
HpyCH4III ACNGT 4 cut(s) 515, 1317, 1419, 1674
HpyCH4IV ACGT 1 cut(s) 102
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 559, 1032, 1235
HpyF3I CTNAG 7 cut(s) 25, 462, 564, 605, 681, 1218, 1758
HpySE526I ACGT 1 cut(s) 102
Hsp92I GRCGYC 1 cut(s) 102
Hsp92II CATG 3 cut(s) 539, 665, 964
Kzo9I GATC 6 cut(s) 42, 343, 415, 645, 976, 1054
LmnI GCTCC 8 cut(s) 385, 437, 663, 1382, 1390, 1453, 1463, 1513
Lsp1109I GCAGC 4 cut(s) 944, 1423, 1516, 1538
LweI GCATC 3 cut(s) 529, 535, 583
MabI ACCWGGT 1 cut(s) 125
MaeI CTAG 2 cut(s) 200, 1647
MaeII ACGT 1 cut(s) 102
MaeIII GTNAC 1 cut(s) 1424
MalI GATC 6 cut(s) 44, 345, 417, 647, 978, 1056
MboI GATC 6 cut(s) 42, 343, 415, 645, 976, 1054
MboII GAAGA 8 cut(s) 106, 216, 261, 471, 474, 477, 480, 1311
MfeI CAATTG 1 cut(s) 597
MflI RGATCY 3 cut(s) 343, 415, 1054
MhlI GDGCHC 9 cut(s) 377, 390, 525, 660, 1261, 1387, 1523, 1553, 1683
MlsI TGGCCA 1 cut(s) 1187
MluNI TGGCCA 1 cut(s) 1187
MlyI GAGTC 6 cut(s) 212, 296, 454, 485, 1181, 1508
MmeI TCCRAC 6 cut(s) 123, 156, 208, 771, 930, 1326
Mox20I TGGCCA 1 cut(s) 1187
MroXI GAANNNNTTC 1 cut(s) 74
MscI TGGCCA 1 cut(s) 1187
MseI TTAA 2 cut(s) 1154, 1275
MslI CAYNNNNRTG 1 cut(s) 862
Msp20I TGGCCA 1 cut(s) 1187
MspA1I CMGCKG 3 cut(s) 14, 29, 1529
MspI CCGG 5 cut(s) 508, 637, 649, 689, 1254
MspR9I CCNGG 8 cut(s) 127, 362, 404, 434, 689, 752, 1629, 1638
MunI CAATTG 1 cut(s) 597
MvaI CCWGG 7 cut(s) 127, 362, 404, 434, 752, 1629, 1638
MwoI GCNNNNNNNGC 4 cut(s) 11, 559, 1032, 1235
NciI CCSGG 1 cut(s) 689
NcoI CCATGG 1 cut(s) 661
NdeI CATATG 2 cut(s) 1162, 1513
NdeII GATC 6 cut(s) 42, 343, 415, 645, 976, 1054
NlaIII CATG 3 cut(s) 539, 665, 964
NmeAIII GCCGAG 1 cut(s) 538
PagI TCATGA 1 cut(s) 535
PasI CCCWGGG 1 cut(s) 433
PceI AGGCCT 1 cut(s) 74
PdmI GAANNNNTTC 1 cut(s) 74
PfeI GAWTC 4 cut(s) 140, 915, 1060, 1301
PinAI ACCGGT 1 cut(s) 1253
PkrI GCNGC 8 cut(s) 31, 934, 1025, 1228, 1413, 1483, 1528, 1531
PleI GAGTC 6 cut(s) 211, 296, 454, 484, 1180, 1507
PpsI GAGTC 6 cut(s) 211, 296, 454, 484, 1180, 1507
PpuMI RGGWCCY 4 cut(s) 445, 685, 748, 1288
PshAI GACNNNNGTC 1 cut(s) 946
Psp124BI GAGCTC 4 cut(s) 525, 660, 1387, 1523
Psp5II RGGWCCY 4 cut(s) 445, 685, 748, 1288
Psp6I CCWGG 7 cut(s) 125, 360, 402, 432, 750, 1627, 1636
PspFI CCCAGC 1 cut(s) 1391
PspGI CCWGG 7 cut(s) 125, 360, 402, 432, 750, 1627, 1636
PspPI GGNCC 8 cut(s) 129, 313, 445, 651, 685, 748, 1288, 1640
PspPPI RGGWCCY 4 cut(s) 445, 685, 748, 1288
PstI CTGCAG 2 cut(s) 1413, 1528
PsuI RGATCY 3 cut(s) 343, 415, 1054
PvuII CAGCTG 1 cut(s) 1529
RsaI GTAC 2 cut(s) 1651, 1728
RsaNI GTAC 2 cut(s) 1650, 1727
RseI CAYNNNNRTG 1 cut(s) 862
Rsr2I CGGWCCG 1 cut(s) 651
RsrII CGGWCCG 1 cut(s) 651
SacI GAGCTC 4 cut(s) 525, 660, 1387, 1523
SalI GTCGAC 3 cut(s) 355, 427, 457
SaqAI TTAA 2 cut(s) 1154, 1275
SatI GCNGC 8 cut(s) 30, 933, 1024, 1227, 1412, 1482, 1527, 1530
Sau3AI GATC 6 cut(s) 42, 343, 415, 645, 976, 1054
Sau96I GGNCC 8 cut(s) 129, 313, 445, 651, 685, 748, 1288, 1640
SchI GAGTC 6 cut(s) 212, 296, 454, 485, 1181, 1508
ScrFI CCNGG 8 cut(s) 127, 362, 404, 434, 689, 752, 1629, 1638
SduI GDGCHC 9 cut(s) 377, 390, 525, 660, 1261, 1387, 1523, 1553, 1683
SexAI ACCWGGT 1 cut(s) 125
SfaNI GCATC 3 cut(s) 529, 535, 583
SfcI CTRYAG 2 cut(s) 1409, 1524
SinI GGWCC 7 cut(s) 129, 313, 445, 651, 685, 748, 1288
SmiMI CAYNNNNRTG 1 cut(s) 862
SmlI CTYRAG 1 cut(s) 1292
SmoI CTYRAG 1 cut(s) 1292
SseBI AGGCCT 1 cut(s) 74
SsiI CCGC 5 cut(s) 14, 29, 1024, 1226, 1482
SspMI CTAG 2 cut(s) 200, 1647
SstI GAGCTC 4 cut(s) 525, 660, 1387, 1523
StuI AGGCCT 1 cut(s) 74
StyD4I CCNGG 8 cut(s) 125, 360, 402, 432, 687, 750, 1627, 1636
StyI CCWWGG 1 cut(s) 661
TaaI ACNGT 4 cut(s) 515, 1317, 1419, 1674
TaiI ACGT 1 cut(s) 105
TaqI TCGA 9 cut(s) 45, 78, 138, 275, 356, 428, 458, 1299, 1438
TauI GCSGC 4 cut(s) 32, 1026, 1229, 1484
TfiI GAWTC 4 cut(s) 140, 915, 1060, 1301
Tru1I TTAA 2 cut(s) 1154, 1275
Tru9I TTAA 2 cut(s) 1154, 1275
TscAI CASTG 3 cut(s) 520, 555, 1558
TseI GCWGC 4 cut(s) 932, 1411, 1526, 1529
TspDTI ATGAA 5 cut(s) 261, 480, 632, 1096, 1572
TspRI CASTG 3 cut(s) 520, 555, 1558
VpaK11BI GGWCC 7 cut(s) 129, 313, 445, 651, 685, 748, 1288
XagI CCTNNNNNAGG 1 cut(s) 68
XapI RAATTY 6 cut(s) 277, 349, 421, 451, 953, 1115
XmiI GTMKAC 3 cut(s) 356, 428, 458
XmnI GAANNNNTTC 1 cut(s) 74
XspI CTAG 2 cut(s) 200, 1647
ZraI GACGTC 1 cut(s) 103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.