Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007461

Physical Location & Seq

Genomic Coordinates Reverse (-)

17766522 .. 17771856

Gene Structure 5335 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g24670.t10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGAAGGTCCATGAAACGAGGTCACACTCTCATTCAAACCCTGATGAGGAGAAGAAAGTAATGACACGGAAGCAGAAGGCTGAGAACAAGGCACATGAAGGAGGCCATCCTCCTAAGAAGCCTAAGGCTGAAGATGATTACAATGGCCATGCAAACGGTAAACCTTCACCTGCAGAGTTTGAGGAACTCTATTCTGCTGTGAAAGAGCATTTGTCAACTGAACAAATGCGAGAAATATTAGAATTTAATGATCAAGACTCTTCCGGCCCAGATGCTGCTGTTCTCAGAAAATGCCAAGATCTGTTGTTCTATGGGCCATTAGATAAGTGTCGTATTTGCAATGGTAAATTGGAGTTCAATGGTATACGATATTCTTGCACCGGTACTTACAGCGAATGGGCTTCTTGTACTCTCAACACAAGGGATCCACCAAGGAAGCAGGAACCGACCAATTTACCTGAGAGCGTTGAGAAGTCTCCTGCTTCAGATTTGCTAAAGAAATATCAGGACCCAAGTCGCCGGCCTAAGAGGGATTTAAGCACTCCTGATAAGCCCTTTACTGGGATGTTAATTTCTCTAATGGGCCGTCTTACAAGATCACATCAATACTGGAGACAGGAAGTAGATAAACATGGAGGAAAGGTTGCCAATCATGTGATTGGTGTGACGTGCCTAATTGCGTCTCCTGCGGAACGAGAACGAGGTGGTACAAATAAACTGGCTGAAGCAATGGAGAGAGGTATACCGGTAGTAAGTGAGAAATGGCTGATTGATAGCATTGAAAAACAAGAACCTCAGCCTCTTGAAGCATATGACATTGTTACTGATCTTGCTCCTGATGGCAAAGGAGTCCCATGGGAGAAAATGGATCCCAGTGAGGAAGCAATTGAGTCGCTTTCAGCAGAACTCAAGCTTTATGGGAAGAGAGCTGTCTACAAAGATACGAAACTGCAGGAGAAAGGCGGGAAAATCTTTGAGAGGGATGAGATATTATACAACAGTGCCGTCTCACGTTGTGATCTAGGACGAAAACTGAACGATTATTGCATCTTGCAACTGATTATGGTGCCAGAGAACAGCCTGAATTTGTATTACAAGAAAGGTAGAGTTGGGGATGACCCCAATGCGGAGGAAAGGCTTGAAGAATGGAAGGACGTGGACGATGCTGTGAAAGAGTTTGTTAGGATATTTGAGGAAGTAACTGGAAACGAGTTTGAACCATGGGAAAGAGAGAAGAAAATACAGAAGAAGCCATTGAAGTTTTTCCCAACAGACATGGACGATGGAGTCGAAGTAAGACATGGAGGGCTTGGTCTTCGTCAGCTGGGAGTTTCTGCCACACACTGTAAACTGCAGCCTGAGGTTGCGAATTTTATGAAGGTCTTGTGCAGTCAGGAGATTTACAAATATGCTCTGATGGAGATGGGGTTGGATGCCCCAGACTTACCAATGGGAATGCTTACAGATGTCCACCTAAAAAGATGTGAGGATGTTCTTCAAGAGTTTGTGGAGAAATTGAAATCAGTGAAGGAATCAGGGCCGGAGTCTGAGGCTATCTGGTCGGACTTCAGCCAAAGATGGTTTACCCTGCTGCACTCTACTAGGCCTTTCATATTCAGGAACTTTCAGGAACTTGCAGATCATGCTGCAGCTGCACTGGAGACTGTTCGGGACATAACCGCGGCCTCACATCTTATTGGAGACATGAGTGGGGCTACCATTGATGATCCATTGTCCGATAGATATAGCAAATTACGGTGCTCAATCTCCCCGCTTGATAAGGAATCTGATGATTATAAAATGATTCTGAAGTACCTTGACAAGACCTATGAACCTGTGAAAGTTGGAGATACTGAATATGGACTGTCTGTCGAGAACATATTTGTTGTGGAATCAAATGCATGTCCATCTTTGGATGAGATAAAGAAGCTGCCCAACAAATTCCTCTTATGGTGTGGGACACGAAGCTCAAATCTAATGAGGCATTTGCATAAGGGTTTCTTGCCTTCAATATGTTCTCTCCCTGTTCCAGGCTATATGGCTGGGAAGGCAATAGTTTGCTCTGATGCTGCGGCAGAAGCTGCCAGGTACGGCTATACTGCTGTAGACAGACCAGAAGGTTTCCTGGTATTGGCAGTGGCTTCTCTGGGTGAGGATATCATTGAACTTAAAAGTCCACCAGAGGACACGAAGTCCTTGGAAGACAAGAAAGCTGGAGTGAAGGGCATAGGGAAGAAGAAGACTGATGAATCGGAGCACTTTGTATGGCAAGATGACATCAAAGTCCCTTGTGGACAATTAGTGCCTTCGGATAATAAAGATAGCATCCTCGAGTATAATGAGTATGCCGTCTATGATCCCAAGCAGACGTGCATAAGGTTCTTGGTGGGTGTGAAGTACGAAGAGAAGAATGCTGTCATGGCCTCCGAGGAGCGACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003909 GO:0003910 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006266 GO:0006271 GO:0006273 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016070 GO:0016874 GO:0016886 GO:0022616 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051103 GO:0051716 GO:0071704 GO:0090304 GO:0140097 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03410 ko04210 ko04212 ko04214 ko04217 map03410 map04210 map04212 map04214 map04217

Pfam Domains

Protein Families

BRCT BRCT_2 PADR1 PARP PARP_reg WGR

Protein Analysis

814

Amino Acids

91.86

Weight (kDa)

5.45

Isoelectric Point (pI)

44.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PADR1_N	PF21728	59 - 105	1.3e-12	PADR1, N-terminal helical domain
Zn_ribbon_PADR1	PF08063	107 - 146	2.5e-13	PADR1 domain, zinc ribbon fold
BRCT	PF00533	182 - 260	9.3e-07	BRCA1 C Terminus (BRCT) domain
BRCT_2	PF16589	186 - 272	2.3e-06	BRCT domain
WGR	PF05406	332 - 410	2.1e-07	WGR domain
PARP_reg	PF02877	449 - 582	4.3e-25	Poly(ADP-ribose) polymerase, regulatory domain
PARP	PF00644	596 - 790	7.5e-48	Poly(ADP-ribose) polymerase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22470
fragaria_vesca	FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670
malus_domestica	MD03G1142500.v1.1
prunus_persica	Prupe.6G127600_v2.0.a1 Prupe.6G127600_v2.0.a1 Prupe.6G127600_v2.0.a1 Prupe.6G127600_v2.0.a1
pyrus_communis	pycom03g09710
rosa_chinensis	RchiOBHm_Chr5g0044231
rosa_laevigata	RLG00000034257
rosa_multiflora	Rmu_sc0000776.1_g000071
rosa_roxburghii	Rroxscaffold_1G00036790
rosa_rugosa	Rorug05G0212700
rosa_samantha	Rh5AG296800 Rh5BG304300 Rh5CG331300 Rh5DG313100
rosa_wichuraiana	Rw5G027490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1797
AarI	CACCTGC	1 cut(s)	178
AasI	GACNNNNNNGTC	2 cut(s)	1286, 2282
Acc36I	ACCTGC	1 cut(s)	178
AccB1I	GGYRCC	1 cut(s)	1066
AccI	GTMKAC	4 cut(s)	364, 742, 933, 2106
AccII	CGCG	1 cut(s)	1682
AciI	CCGC	7 cut(s)	689, 963, 1127, 1680, 1682, 1772, 2072
AclWI	GGATC	6 cut(s)	419, 432, 863, 876, 1721, 2351
AcoI	YGGCCR	1 cut(s)	145
AcsI	RAATTY	4 cut(s)	242, 1084, 1369, 1940
AcuI	CTGAAG	5 cut(s)	150, 468, 744, 1552, 1829
AdeI	CACNNNGTG	1 cut(s)	1016
AfaI	GTAC	6 cut(s)	385, 409, 709, 1814, 2090, 2399
AfiI	CCNNNNNNNGG	6 cut(s)	46, 560, 561, 1126, 2030, 2131
AgeI	ACCGGT	2 cut(s)	380, 745
AhdI	GACNNNNNGTC	2 cut(s)	1868, 2191
AjiI	CACGTC	3 cut(s)	669, 1156, 2370
AjnI	CCWGG	3 cut(s)	2029, 2084, 2124
AluBI	AGCT	8 cut(s)	913, 929, 1324, 1652, 1930, 1968, 2081, 2213
AluI	AGCT	8 cut(s)	913, 929, 1324, 1652, 1930, 1968, 2081, 2213
Alw21I	GWGCWC	2 cut(s)	1763, 2259
Alw26I	GTCTC	6 cut(s)	480, 607, 687, 1012, 1655, 1695
AlwI	GGATC	6 cut(s)	419, 432, 863, 876, 1721, 2351
AlwNI	CAGNNNCTG	2 cut(s)	275, 2081
Ama87I	CYCGRG	1 cut(s)	2330
ApeKI	GCWGC	9 cut(s)	275, 1354, 1591, 1646, 1649, 1652, 1930, 2069, 2081
ApoI	RAATTY	4 cut(s)	242, 1084, 1369, 1940
AsiGI	ACCGGT	2 cut(s)	380, 745
Asp700I	GAANNNNTTC	1 cut(s)	1262
AspS9I	GGNCC	6 cut(s)	7, 266, 314, 508, 583, 1538
AsuHPI	GGTGA	2 cut(s)	159, 2162
AvaI	CYCGRG	1 cut(s)	2330
AvaII	GGWCC	2 cut(s)	7, 508
AxyI	CCTNAGG	2 cut(s)	123, 1359
BalI	TGGCCA	1 cut(s)	147
BamHI	GGATCC	2 cut(s)	424, 868
BanI	GGYRCC	1 cut(s)	1066
BbsI	GAAGAC	3 cut(s)	1307, 2208, 2246
Bbv12I	GWGCWC	2 cut(s)	1763, 2259
BbvCI	CCTCAGC	1 cut(s)	795
BbvI	GCAGC	9 cut(s)	262, 1366, 1578, 1633, 1639, 1661, 1917, 2056, 2068
BccI	CCATC	7 cut(s)	114, 833, 1277, 1411, 1417, 1572, 1915
BceAI	ACGGC	4 cut(s)	570, 989, 2107, 2333
BcgI	CGANNNNNNTGC	4 cut(s)	357, 391, 873, 907
BciT130I	CCWGG	3 cut(s)	2031, 2086, 2126
BclI	TGATCA	1 cut(s)	250
BcoDI	GTCTC	6 cut(s)	480, 607, 687, 1012, 1655, 1695
BfaI	CTAG	2 cut(s)	1022, 1602
BfmI	CTRYAG	5 cut(s)	171, 950, 1352, 1647, 2103
BfuAI	ACCTGC	1 cut(s)	178
BglII	AGATCT	1 cut(s)	298
Bme1390I	CCNGG	3 cut(s)	2031, 2086, 2126
Bme18I	GGWCC	2 cut(s)	7, 508
BmeRI	GACNNNNNGTC	2 cut(s)	1868, 2191
BmeT110I	CYCGRG	1 cut(s)	2330
BmgBI	CACGTC	3 cut(s)	669, 1156, 2370
BmgT120I	GGNCC	6 cut(s)	7, 266, 314, 508, 583, 1538
BmiI	GGNNCC	5 cut(s)	426, 444, 510, 870, 1068
BmrFI	CCNGG	3 cut(s)	2031, 2086, 2126
BmrI	ACTGGG	2 cut(s)	570, 867
BmsI	GCATC	6 cut(s)	262, 1056, 1153, 1423, 2056, 2334
BmuI	ACTGGG	2 cut(s)	570, 867
BoxI	GACNNNNGTC	1 cut(s)	513
BpiI	GAAGAC	3 cut(s)	1307, 2208, 2246
BpmI	CTGGAG	3 cut(s)	631, 1679, 2235
Bpu10I	CCTNAGC	1 cut(s)	795
BpuEI	CTTGAG	1 cut(s)	893
BsaJI	CCNNGG	6 cut(s)	431, 854, 1220, 1680, 2196, 2427
BsaWI	WCCGGW	2 cut(s)	380, 745
BsaXI	ACNNNNNCTCC	6 cut(s)	627, 657, 1278, 1308, 1412, 1442
Bsc4I	CCNNNNNNNGG	6 cut(s)	46, 560, 561, 1126, 2030, 2131
Bse118I	RCCGGY	3 cut(s)	380, 519, 745
Bse1I	ACTGG	6 cut(s)	565, 614, 723, 873, 1207, 1662
Bse21I	CCTNAGG	2 cut(s)	123, 1359
Bse3DI	GCAATG	2 cut(s)	346, 735
BseBI	CCWGG	3 cut(s)	2031, 2086, 2126
BseDI	CCNNGG	6 cut(s)	431, 854, 1220, 1680, 2196, 2427
BseGI	GGATG	8 cut(s)	106, 570, 988, 1120, 1438, 1495, 1921, 2325
BseLI	CCNNNNNNNGG	6 cut(s)	46, 560, 561, 1126, 2030, 2131
BseMI	GCAATG	2 cut(s)	346, 735
BseMII	CTCAG	6 cut(s)	72, 298, 450, 809, 1350, 1539
BseNI	ACTGG	6 cut(s)	565, 614, 723, 873, 1207, 1662
BseRI	GAGGAG	1 cut(s)	62
BseXI	GCAGC	9 cut(s)	262, 1366, 1578, 1633, 1639, 1661, 1917, 2056, 2068
BseYI	CCCAGC	2 cut(s)	1324, 2042
BsgI	GTGCAG	3 cut(s)	1408, 1577, 1638
Bsh1236I	CGCG	1 cut(s)	1682
BshNI	GGYRCC	1 cut(s)	1066
BshTI	ACCGGT	2 cut(s)	380, 745
BsiHKAI	GWGCWC	2 cut(s)	1763, 2259
BsiHKCI	CYCGRG	1 cut(s)	2330
BsiSI	CCGG	5 cut(s)	264, 381, 520, 746, 1541
BslFI	GGGAC	4 cut(s)	836, 1685, 1972, 2270
BslI	CCNNNNNNNGG	6 cut(s)	46, 560, 561, 1126, 2030, 2131
BsmAI	GTCTC	6 cut(s)	480, 607, 687, 1012, 1655, 1695
BsmBI	CGTCTC	2 cut(s)	687, 1012
BsmFI	GGGAC	4 cut(s)	836, 1685, 1972, 2270
BsmI	GAATGC	2 cut(s)	1461, 2416
BsoBI	CYCGRG	1 cut(s)	2330
Bsp1286I	GDGCHC	2 cut(s)	1763, 2259
Bsp19I	CCATGG	2 cut(s)	854, 1220
BspACI	CCGC	7 cut(s)	689, 963, 1127, 1680, 1682, 1772, 2072
BspCNI	CTCAG	6 cut(s)	73, 297, 451, 808, 1351, 1540
BspFNI	CGCG	1 cut(s)	1682
BspLI	GGNNCC	5 cut(s)	426, 444, 510, 870, 1068
BspMAI	CTGCAG	4 cut(s)	175, 954, 1356, 1651
BspMI	ACCTGC	1 cut(s)	178
BspPI	GGATC	6 cut(s)	419, 432, 863, 876, 1721, 2351
BspT107I	GGYRCC	1 cut(s)	1066
BsrDI	GCAATG	2 cut(s)	346, 735
BsrFI	RCCGGY	3 cut(s)	380, 519, 745
BsrI	ACTGG	6 cut(s)	565, 614, 723, 873, 1207, 1662
BssAI	RCCGGY	3 cut(s)	380, 519, 745
BssECI	CCNNGG	6 cut(s)	431, 854, 1220, 1680, 2196, 2427
BssNAI	GTATAC	2 cut(s)	365, 743
BssT1I	CCWWGG	4 cut(s)	431, 854, 1220, 2196
Bst1107I	GTATAC	2 cut(s)	365, 743
Bst2UI	CCWGG	3 cut(s)	2031, 2086, 2126
Bst4CI	ACNGT	6 cut(s)	158, 1001, 1346, 1666, 1758, 1866
Bst6I	CTCTTC	3 cut(s)	265, 917, 2397
BstAPI	GCANNNNNTGC	2 cut(s)	1643, 2081
BstC8I	GCNNGC	1 cut(s)	521
BstDEI	CTNAG	9 cut(s)	81, 114, 123, 284, 459, 525, 795, 1359, 1548
BstDSI	CCRYGG	3 cut(s)	854, 1220, 1680
BstENI	CCTNNNNNAGG	1 cut(s)	2028
BstF5I	GGATG	8 cut(s)	106, 570, 988, 1120, 1438, 1495, 1921, 2325
BstFNI	CGCG	1 cut(s)	1682
BstMAI	GTCTC	6 cut(s)	480, 607, 687, 1012, 1655, 1695
BstMWI	GCNNNNNNNGC	7 cut(s)	686, 1643, 1652, 2048, 2078, 2081, 2420
BstNI	CCWGG	3 cut(s)	2031, 2086, 2126
BstNSI	RCATGY	1 cut(s)	1905
BstPAI	GACNNNNGTC	1 cut(s)	513
BstSCI	CCNGG	3 cut(s)	2029, 2084, 2124
BstSFI	CTRYAG	5 cut(s)	171, 950, 1352, 1647, 2103
BstUI	CGCG	1 cut(s)	1682
BstV1I	GCAGC	9 cut(s)	262, 1366, 1578, 1633, 1639, 1661, 1917, 2056, 2068
BstV2I	GAAGAC	3 cut(s)	1307, 2208, 2246
BstX2I	RGATCY	3 cut(s)	298, 424, 868
BstYI	RGATCY	3 cut(s)	298, 424, 868
BstZ17I	GTATAC	2 cut(s)	365, 743
Bsu36I	CCTNAGG	2 cut(s)	123, 1359
BtgI	CCRYGG	3 cut(s)	854, 1220, 1680
BtrI	CACGTC	3 cut(s)	669, 1156, 2370
BtsCI	GGATG	8 cut(s)	106, 570, 988, 1120, 1438, 1495, 1921, 2325
BtsI	GCAGTG	1 cut(s)	2142
BtsIMutI	CAGTG	6 cut(s)	880, 1006, 1342, 1530, 1655, 2142
BveI	ACCTGC	1 cut(s)	178
Cac8I	GCNNGC	1 cut(s)	521
CaiI	CAGNNNCTG	2 cut(s)	275, 2081
Cfr10I	RCCGGY	3 cut(s)	380, 519, 745
Cfr13I	GGNCC	6 cut(s)	7, 266, 314, 508, 583, 1538
Cfr42I	CCGCGG	1 cut(s)	1683
CseI	GACGC	1 cut(s)	669
Csp6I	GTAC	6 cut(s)	384, 408, 708, 1813, 2089, 2398
CspAI	ACCGGT	2 cut(s)	380, 745
CviQI	GTAC	6 cut(s)	384, 408, 708, 1813, 2089, 2398
DdeI	CTNAG	9 cut(s)	81, 114, 123, 284, 459, 525, 795, 1359, 1548
DraIII	CACNNNGTG	1 cut(s)	1016
DrdI	GACNNNNNNGTC	2 cut(s)	1286, 2282
DriI	GACNNNNNGTC	2 cut(s)	1868, 2191
DseDI	GACNNNNNNGTC	2 cut(s)	1286, 2282
EaeI	YGGCCR	1 cut(s)	145
Eam1104I	CTCTTC	3 cut(s)	265, 917, 2397
Eam1105I	GACNNNNNGTC	2 cut(s)	1868, 2191
EarI	CTCTTC	3 cut(s)	265, 917, 2397
Eco130I	CCWWGG	4 cut(s)	431, 854, 1220, 2196
Eco147I	AGGCCT	1 cut(s)	1606
Eco32I	GATATC	1 cut(s)	2158
Eco47I	GGWCC	2 cut(s)	7, 508
Eco57I	CTGAAG	5 cut(s)	150, 468, 744, 1552, 1829
Eco81I	CCTNAGG	2 cut(s)	123, 1359
Eco88I	CYCGRG	1 cut(s)	2330
EcoNI	CCTNNNNNAGG	1 cut(s)	2028
EcoO109I	RGGNCCY	1 cut(s)	508
EcoRII	CCWGG	3 cut(s)	2029, 2084, 2124
EcoRV	GATATC	1 cut(s)	2158
EcoT14I	CCWWGG	4 cut(s)	431, 854, 1220, 2196
EcoT22I	ATGCAT	1 cut(s)	1903
ErhI	CCWWGG	4 cut(s)	431, 854, 1220, 2196
Esp3I	CGTCTC	2 cut(s)	687, 1012
FalI	AAGNNNNNCTT	2 cut(s)	1985, 2017
FaqI	GGGAC	4 cut(s)	836, 1685, 1972, 2270
FauI	CCCGC	2 cut(s)	956, 1779
FauNDI	CATATG	1 cut(s)	811
FbaI	TGATCA	1 cut(s)	250
FblI	GTMKAC	4 cut(s)	364, 742, 933, 2106
FokI	GGATG	8 cut(s)	93, 577, 995, 1127, 1445, 1502, 1928, 2312
FspBI	CTAG	2 cut(s)	1022, 1602
GsaI	CCCAGC	2 cut(s)	1328, 2046
GsuI	CTGGAG	3 cut(s)	631, 1679, 2235
HapII	CCGG	5 cut(s)	264, 381, 520, 746, 1541
HgaI	GACGC	1 cut(s)	669
HincII	GTYRAC	1 cut(s)	216
HindII	GTYRAC	1 cut(s)	216
HindIII	AAGCTT	1 cut(s)	911
HpaII	CCGG	5 cut(s)	264, 381, 520, 746, 1541
HphI	GGTGA	2 cut(s)	159, 2162
HpyCH4III	ACNGT	6 cut(s)	158, 1001, 1346, 1666, 1758, 1866
HpyCH4IV	ACGT	4 cut(s)	668, 1012, 1155, 2369
HpyF10VI	GCNNNNNNNGC	7 cut(s)	686, 1643, 1652, 2048, 2078, 2081, 2420
HpyF3I	CTNAG	9 cut(s)	81, 114, 123, 284, 459, 525, 795, 1359, 1548
HpySE526I	ACGT	4 cut(s)	668, 1012, 1155, 2369
KroI	GCCGGC	1 cut(s)	519
KroNI	GCCGGC	1 cut(s)	521
Ksp22I	TGATCA	1 cut(s)	250
KspI	CCGCGG	1 cut(s)	1683
LmnI	GCTCC	3 cut(s)	838, 2254, 2431
Lsp1109I	GCAGC	9 cut(s)	262, 1366, 1578, 1633, 1639, 1661, 1917, 2056, 2068
LweI	GCATC	6 cut(s)	262, 1056, 1153, 1423, 2056, 2334
MaeI	CTAG	2 cut(s)	1022, 1602
MaeII	ACGT	4 cut(s)	668, 1012, 1155, 2369
MaeIII	GTNAC	4 cut(s)	21, 664, 820, 1198
MfeI	CAATTG	1 cut(s)	885
MflI	RGATCY	3 cut(s)	298, 424, 868
MhlI	GDGCHC	2 cut(s)	1763, 2259
MlsI	TGGCCA	1 cut(s)	147
MluNI	TGGCCA	1 cut(s)	147
MlyI	GAGTC	5 cut(s)	251, 858, 899, 1296, 1553
MmeI	TCCRAC	3 cut(s)	1410, 1542, 1825
Mox20I	TGGCCA	1 cut(s)	147
Mph1103I	ATGCAT	1 cut(s)	1903
MroNI	GCCGGC	1 cut(s)	519
MroXI	GAANNNNTTC	1 cut(s)	1262
MscI	TGGCCA	1 cut(s)	147
MseI	TTAA	4 cut(s)	246, 536, 569, 2169
Msp20I	TGGCCA	1 cut(s)	147
MspA1I	CMGCKG	3 cut(s)	1324, 1652, 1682
MspI	CCGG	5 cut(s)	264, 381, 520, 746, 1541
MspR9I	CCNGG	3 cut(s)	2031, 2086, 2126
MunI	CAATTG	1 cut(s)	885
Mva1269I	GAATGC	2 cut(s)	1461, 2416
MvaI	CCWGG	3 cut(s)	2031, 2086, 2126
MvnI	CGCG	1 cut(s)	1682
MwoI	GCNNNNNNNGC	7 cut(s)	686, 1643, 1652, 2048, 2078, 2081, 2420
NaeI	GCCGGC	1 cut(s)	521
NcoI	CCATGG	2 cut(s)	854, 1220
NdeI	CATATG	1 cut(s)	811
NgoMIV	GCCGGC	1 cut(s)	519
NlaIV	GGNNCC	5 cut(s)	426, 444, 510, 870, 1068
NmuCI	GTSAC	2 cut(s)	21, 664
NsiI	ATGCAT	1 cut(s)	1903
NspI	RCATGY	1 cut(s)	1905
PaeR7I	CTCGAG	1 cut(s)	2330
PaqCI	CACCTGC	1 cut(s)	178
PceI	AGGCCT	1 cut(s)	1606
PcsI	WCGNNNNNNNCGW	1 cut(s)	1287
PctI	GAATGC	2 cut(s)	1461, 2416
PdiI	GCCGGC	1 cut(s)	521
PdmI	GAANNNNTTC	1 cut(s)	1262
PfeI	GAWTC	5 cut(s)	1532, 1784, 1804, 1892, 2249
PinAI	ACCGGT	2 cut(s)	380, 745
PleI	GAGTC	5 cut(s)	251, 857, 898, 1295, 1552
PpsI	GAGTC	5 cut(s)	251, 857, 898, 1295, 1552
PpuMI	RGGWCCY	1 cut(s)	508
PshAI	GACNNNNGTC	1 cut(s)	513
PsiI	TTATAA	1 cut(s)	1797
Psp5II	RGGWCCY	1 cut(s)	508
Psp6I	CCWGG	3 cut(s)	2029, 2084, 2124
PspFI	CCCAGC	2 cut(s)	1324, 2042
PspGI	CCWGG	3 cut(s)	2029, 2084, 2124
PspN4I	GGNNCC	5 cut(s)	426, 444, 510, 870, 1068
PspPI	GGNCC	6 cut(s)	7, 266, 314, 508, 583, 1538
PspPPI	RGGWCCY	1 cut(s)	508
PspXI	VCTCGAGB	1 cut(s)	2330
PstI	CTGCAG	4 cut(s)	175, 954, 1356, 1651
PstNI	CAGNNNCTG	2 cut(s)	275, 2081
PsuI	RGATCY	3 cut(s)	298, 424, 868
PvuII	CAGCTG	2 cut(s)	1324, 1652
RsaI	GTAC	6 cut(s)	385, 409, 709, 1814, 2090, 2399
RsaNI	GTAC	6 cut(s)	384, 408, 708, 1813, 2089, 2398
SacII	CCGCGG	1 cut(s)	1683
SaqAI	TTAA	4 cut(s)	246, 536, 569, 2169
Sau96I	GGNCC	6 cut(s)	7, 266, 314, 508, 583, 1538
SchI	GAGTC	5 cut(s)	251, 858, 899, 1296, 1553
ScrFI	CCNGG	3 cut(s)	2031, 2086, 2126
SduI	GDGCHC	2 cut(s)	1763, 2259
SfaNI	GCATC	6 cut(s)	262, 1056, 1153, 1423, 2056, 2334
SfcI	CTRYAG	5 cut(s)	171, 950, 1352, 1647, 2103
Sfr274I	CTCGAG	1 cut(s)	2330
Sfr303I	CCGCGG	1 cut(s)	1683
SgrBI	CCGCGG	1 cut(s)	1683
SinI	GGWCC	2 cut(s)	7, 508
SlaI	CTCGAG	1 cut(s)	2330
SmlI	CTYRAG	2 cut(s)	908, 2330
SmoI	CTYRAG	2 cut(s)	908, 2330
SseBI	AGGCCT	1 cut(s)	1606
SsiI	CCGC	7 cut(s)	689, 963, 1127, 1680, 1682, 1772, 2072
SspI	AATATT	1 cut(s)	237
SspMI	CTAG	2 cut(s)	1022, 1602
StuI	AGGCCT	1 cut(s)	1606
StyD4I	CCNGG	3 cut(s)	2029, 2084, 2124
StyI	CCWWGG	4 cut(s)	431, 854, 1220, 2196
TaaI	ACNGT	6 cut(s)	158, 1001, 1346, 1666, 1758, 1866
TaiI	ACGT	4 cut(s)	671, 1015, 1158, 2372
TaqI	TCGA	3 cut(s)	1290, 1872, 2331
TatI	WGTACW	1 cut(s)	407
TauI	GCSGC	2 cut(s)	1685, 2075
TfiI	GAWTC	5 cut(s)	1532, 1784, 1804, 1892, 2249
Tru1I	TTAA	4 cut(s)	246, 536, 569, 2169
Tru9I	TTAA	4 cut(s)	246, 536, 569, 2169
TscAI	CASTG	6 cut(s)	880, 1006, 1349, 1530, 1662, 2142
TseFI	GTSAC	2 cut(s)	21, 664
TseI	GCWGC	9 cut(s)	275, 1354, 1591, 1646, 1649, 1652, 1930, 2069, 2081
Tsp45I	GTSAC	2 cut(s)	21, 664
TspDTI	ATGAA	7 cut(s)	17, 27, 111, 1391, 1600, 1845, 2262
TspGWI	ACGGA	1 cut(s)	82
TspRI	CASTG	6 cut(s)	880, 1006, 1349, 1530, 1662, 2142
VpaK11BI	GGWCC	2 cut(s)	7, 508
XagI	CCTNNNNNAGG	1 cut(s)	2028
XapI	RAATTY	4 cut(s)	242, 1084, 1369, 1940
XceI	RCATGY	1 cut(s)	1905
XhoI	CTCGAG	1 cut(s)	2330
XmiI	GTMKAC	4 cut(s)	364, 742, 933, 2106
XmnI	GAANNNNTTC	1 cut(s)	1262
XspI	CTAG	2 cut(s)	1022, 1602
Zsp2I	ATGCAT	1 cut(s)	1903

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.