Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0007461

Physical Location & Seq

Genomic Coordinates Reverse (-)

9851068 .. 9856312

Gene Structure 5245 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G127600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2436 bp

ATGAGGGTTCATGAAACAAGGTCTCATTCCCATCCAAATACTGAGGAGGACAAAGTGATGACAAGGAAGCAAAAGGCAGAGAACAAGGCACATGAAGCAGAGCAGTCTCCGAAGAAGCCCAAGTCTGAAGGTGACAATGGCCATGCAAATGGTAAATCTTCAGAGGACATAGTTGCTGAGTTTGAGAAGGTCTGCACAGCAGTCAAAGATAACCTGTCAGCAGAACAAATGCGAGAAATCTTGGAAGCTAATGGCCAAGACTCCTCTGGCTCCGATGCTAATGTCCTTCGAAAATGCCAAGACTTGCTGTTTTATGGGCCATTAGATAAATGCCCAGCTTGCAATGGAAATTTGGAGTTCACTGGTATACGCTATTCTTGCACTGGATCTTATAGTGAATGGGCGTCTTGTACATATAGCACAAAGGATCCACCAAGGAAACAAGAACCAATTAAGTTACCAGATAGTATCCTGAACTCTCCTGCTTCCGATTTGATAAAGAAATATGAGGACCCAAGTCGCCGGCCTAGGAAGGTTCTAAGCATCCCGGACAAGCCTTTTACTGGGATGTTGATGTCTCTTATGGGCCGTCTTTCTGTATCTCATCAATACTGGAGAAAAGAAATAGAAAAACATGGAGGAAAGGTTGCCAACCATGTGATTGGTGTAACTTGCCTCATTGCGTCTTCTGTGGAGCGAGAGCGAGGTGGCTCCTCTAAACTTGCAGAAGCAATGGAAAGAGGGATACCTGTAGTAAGTGAAGCATGGTTGAAAGACAGCATTGAAAAACAAGAACCCCAGCCTCTCGAAGCGTATGATATTGTCACTGATCTTGCTCCTGATGGCAGAGGAATTCCGTGGGAGAAAATGGATCCAAGTGAAGAGGCACTTGAATCCCTTTCAGCAGAACTGAAGCTTTATGGGAAGAGAGGTGTCCACAAAGATACGAAATTGCAGGAGCGAGGCGGGAAAATCTTTGAGAAAGATGGCATACTGTACAACTGTGCCTTCTCTCGTTGTGATCTGGGGAAAAAACTGAACGATTATTCTGTCATGCAACTGATTTCAGTACCAGAGAGCAACCTGAATTTGTACTATAAGAAAGGGAAAGTTGGTGATGATCCCAAAGCGGAGGAGAGGCTTGAAGAATGGGAGAACGTGGAAGCTGCTGTGAAGGAGTTTGTGAGGCTCTTTGAGGAAGTAACTGGAAATGAGTTTGAACCATGGGAAAGAGAAAAGAAAATCCAAAAGAAGCCATTGAAGTTTTACCCGATAGACATGGATGATGGACTTGATGTGAGACATGGAGGACTTGGTCTTCACCAATTGGGTGTTGCCGCCACACATTGCAAACTTGAGCCTTTGGTTGCAAATTTCATGAAGGTCTTATGCAGTCAGGAGATTTACAAATATGCTTTGATGGAGATGGGATACGACCCCCCCGAATTACCAATGGGGATGCTTTCTGATGCCCACTTAAAAAGATGTGAGGAGGTTCTTCAAAAGTTCGTAGAGACGTTGAAATCAATGAAGGATACAGGGCCAAAGGCCAAGGCTGTCTGGTCAGATTTTAGCCAAAGATGGTTCACCCTCATGCACTCTACCCGGCCTTTTATCTTCAAGGACTTTCAGGAACTTGCAGATAATGCTGCAGCTGCACTCGAAACTATTCGGGACATAACCGTGGCTTCACATCTTATTGGAGACATGGGTGGATCTACTGTTGATGACCCCTTGTCTGAACGGTATAACAAAATGGGCTGCTCCATTTCTCCACTGGATAAGGAATCTGATGATTGTAAGATGATTCTGAAGTACCTTGAGACAACCTATGAACCTGTCAAAGTTGGGGATGTTGAATATAAGGTCTCTGTTGACAACATATTCGTTGTCGAATCAAGTGCCTGTCCATCAGTAGACGAAATAAAGAAGCTACCAAACAAAGTCCTCTTATGGTGTGGAACACAGAGCTCCAATCTGTTGAGGCACTTGCATAGAGGTTTCTTGCCTGCAATATGCTCTCTCCCTGTCCCAGGCTATATGTTTGGCAAGGCTATTGTGTGCTCTGACGCTGCTGCAGAAGCTACTAGGTATGGTTTTACTGCTGTGGATAGGCCAGAAGGATTCTTGGTCTTGGCTGTGGCTTCTCTGGGAGATGAGATTATTGAAATCAAGAGCCCACCTGAGGACACCAAGTCGTTAGAAGAGAAGAAAGTCGGAGTGAAGGGCATGGGTAGGAAGAAGACAGATGAATCAGAGCACTTCGTCTGGCAAGATGACATCAAAGTTCCTTGTGGTCGCTTAGTGCCTTCAGATAATAAAGACAGCATTCTCGAATACAATGAGTATGCCGTGTATGATCCAAAACAGGTAAGCATCAGGTTCTTGGTGGGTGTGAAGTATGAAGAGAAGAATGCGGTGATGGAACCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003909 GO:0003910 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006266 GO:0006271 GO:0006273 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016070 GO:0016874 GO:0016886 GO:0022616 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051103 GO:0051716 GO:0071704 GO:0090304 GO:0140097 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03410 ko04210 ko04212 ko04214 ko04217 map03410 map04210 map04212 map04214 map04217

Pfam Domains

Protein Families

BRCT BRCT_2 PADR1 PARP PARP_reg WGR

Protein Analysis

812

Amino Acids

91.05

Weight (kDa)

5.5

Isoelectric Point (pI)

43.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22470
fragaria_vesca	FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670
malus_domestica	MD03G1142500.v1.1
prunus_persica	Prupe.6G127600_v2.0.a1 Prupe.6G127600_v2.0.a1 Prupe.6G127600_v2.0.a1 Prupe.6G127600_v2.0.a1
pyrus_communis	pycom03g09710
rosa_chinensis	RchiOBHm_Chr5g0044231
rosa_laevigata	RLG00000034257
rosa_multiflora	Rmu_sc0000776.1_g000071
rosa_roxburghii	Rroxscaffold_1G00036790
rosa_rugosa	Rorug05G0212700
rosa_samantha	Rh5AG296800 Rh5BG304300 Rh5CG331300 Rh5DG313100
rosa_wichuraiana	Rw5G027490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	367, 1917
AciI	CCGC	4 cut(s)	966, 1130, 1338, 2417
AclWI	GGATC	8 cut(s)	394, 422, 435, 866, 879, 1115, 1723, 2354
AcoI	YGGCCR	2 cut(s)	139, 253
AcsI	RAATTY	4 cut(s)	349, 852, 1087, 1372
AcuI	CTGAAG	5 cut(s)	144, 147, 932, 1832, 2295
AcyI	GRCGYC	1 cut(s)	404
AfaI	GTAC	5 cut(s)	412, 998, 1071, 1094, 1817
AfiI	CCNNNNNNNGG	3 cut(s)	563, 2033, 2185
AhdI	GACNNNNNGTC	2 cut(s)	1735, 2194
AjnI	CCWGG	1 cut(s)	2032
AluBI	AGCT	8 cut(s)	248, 338, 916, 1166, 1655, 1933, 1971, 2084
AluI	AGCT	8 cut(s)	248, 338, 916, 1166, 1655, 1933, 1971, 2084
Alw21I	GWGCWC	3 cut(s)	1973, 2066, 2262
Alw26I	GTCTC	8 cut(s)	27, 111, 582, 1294, 1508, 1698, 1817, 1873
AlwI	GGATC	8 cut(s)	394, 422, 435, 866, 879, 1115, 1723, 2354
AoxI	GGCC	9 cut(s)	139, 253, 317, 524, 586, 1541, 1548, 1607, 2114
ApeKI	GCWGC	7 cut(s)	1166, 1649, 1652, 1655, 1761, 2072, 2075
ApoI	RAATTY	4 cut(s)	349, 852, 1087, 1372
ArsI	GACNNNNNNTTYG	2 cut(s)	1868, 1900
Asp700I	GAANNNNTTC	1 cut(s)	1668
AspA2I	CCTAGG	1 cut(s)	527
AspS9I	GGNCC	4 cut(s)	317, 511, 586, 1541
AsuC2I	CCSGG	2 cut(s)	548, 1606
AsuHPI	GGTGA	5 cut(s)	143, 1127, 1313, 1579, 2431
AsuII	TTCGAA	1 cut(s)	289
AvaII	GGWCC	1 cut(s)	511
AvrII	CCTAGG	1 cut(s)	527
AxyI	CCTNAGG	1 cut(s)	2184
BalI	TGGCCA	2 cut(s)	141, 255
BamHI	GGATCC	2 cut(s)	427, 871
BanII	GRGCYC	2 cut(s)	1973, 2180
BbsI	GAAGAC	3 cut(s)	678, 1310, 2249
Bbv12I	GWGCWC	3 cut(s)	1973, 2066, 2262
BbvI	GCAGC	7 cut(s)	1153, 1636, 1642, 1664, 1748, 2059, 2062
BccI	CCATC	9 cut(s)	39, 836, 980, 1280, 1414, 1420, 1575, 1918, 2416
BceAI	ACGGC	2 cut(s)	573, 2336
BcgI	CGANNNNNNTGC	2 cut(s)	1883, 1917
BciT130I	CCWGG	1 cut(s)	2034
BciVI	GTATCC	4 cut(s)	479, 738, 1424, 1528
BcnI	CCSGG	2 cut(s)	548, 1606
BcoDI	GTCTC	8 cut(s)	27, 111, 582, 1294, 1508, 1698, 1817, 1873
BfaI	CTAG	2 cut(s)	528, 2088
BfmI	CTRYAG	3 cut(s)	750, 1650, 2076
BfuI	GTATCC	4 cut(s)	479, 738, 1424, 1528
BisI	GCNGC	8 cut(s)	1167, 1338, 1650, 1653, 1656, 1762, 2073, 2076
BlnI	CCTAGG	1 cut(s)	527
BlsI	GCNGC	8 cut(s)	1168, 1339, 1651, 1654, 1657, 1763, 2074, 2077
Bme1390I	CCNGG	3 cut(s)	548, 1606, 2034
Bme18I	GGWCC	1 cut(s)	511
BmeRI	GACNNNNNGTC	2 cut(s)	1735, 2194
BmgT120I	GGNCC	4 cut(s)	317, 511, 586, 1541
BmiI	GGNNCC	6 cut(s)	271, 429, 513, 712, 873, 2427
BmrFI	CCNGG	3 cut(s)	548, 1606, 2034
BmrI	ACTGGG	1 cut(s)	573
BmsI	GCATC	5 cut(s)	265, 552, 1449, 1459, 2385
BmuI	ACTGGG	1 cut(s)	573
BoxI	GACNNNNGTC	1 cut(s)	516
BpiI	GAAGAC	3 cut(s)	678, 1310, 2249
BpmI	CTGGAG	1 cut(s)	634
Bpu14I	TTCGAA	1 cut(s)	289
BpuEI	CTTGAG	2 cut(s)	1376, 1841
BpuMI	CCSGG	2 cut(s)	548, 1606
BsaHI	GRCGYC	1 cut(s)	404
BsaI	GGTCTC	2 cut(s)	27, 1873
BsaJI	CCNNGG	7 cut(s)	434, 527, 857, 1223, 1551, 1683, 2032
BsaXI	ACNNNNNCTCC	2 cut(s)	630, 660
Bsc4I	CCNNNNNNNGG	3 cut(s)	563, 2033, 2185
Bse118I	RCCGGY	1 cut(s)	522
Bse1I	ACTGG	6 cut(s)	367, 388, 568, 617, 1210, 1782
Bse21I	CCTNAGG	1 cut(s)	2184
Bse3DI	GCAATG	4 cut(s)	349, 678, 738, 1345
BseBI	CCWGG	1 cut(s)	2034
BseDI	CCNNGG	7 cut(s)	434, 527, 857, 1223, 1551, 1683, 2032
BseGI	GGATG	6 cut(s)	31, 543, 573, 1288, 1464, 1858
BseLI	CCNNNNNNNGG	3 cut(s)	563, 2033, 2185
BseMI	GCAATG	4 cut(s)	349, 678, 738, 1345
BseMII	CTCAG	3 cut(s)	33, 168, 2175
BseNI	ACTGG	6 cut(s)	367, 388, 568, 617, 1210, 1782
BseRI	GAGGAG	5 cut(s)	59, 253, 703, 1148, 1505
BseXI	GCAGC	7 cut(s)	1153, 1636, 1642, 1664, 1748, 2059, 2062
BseYI	CCCAGC	2 cut(s)	334, 798
BsgI	GTGCAG	2 cut(s)	178, 1641
BshFI	GGCC	9 cut(s)	141, 255, 319, 526, 588, 1543, 1550, 1609, 2116
BsiHKAI	GWGCWC	3 cut(s)	1973, 2066, 2262
BsiSI	CCGG	3 cut(s)	523, 548, 1606
BslFI	GGGAC	2 cut(s)	1688, 2015
BslI	CCNNNNNNNGG	3 cut(s)	563, 2033, 2185
BsmAI	GTCTC	8 cut(s)	27, 111, 582, 1294, 1508, 1698, 1817, 1873
BsmBI	CGTCTC	1 cut(s)	1508
BsmFI	GGGAC	2 cut(s)	1688, 2015
BsmI	GAATGC	2 cut(s)	2328, 2419
BsnI	GGCC	9 cut(s)	141, 255, 319, 526, 588, 1543, 1550, 1609, 2116
Bso31I	GGTCTC	2 cut(s)	27, 1873
Bsp119I	TTCGAA	1 cut(s)	289
Bsp1286I	GDGCHC	4 cut(s)	1973, 2066, 2180, 2262
Bsp1407I	TGTACA	2 cut(s)	410, 996
Bsp143I	GATC	8 cut(s)	386, 427, 829, 871, 1021, 1120, 1715, 2359
Bsp19I	CCATGG	1 cut(s)	1223
BspACI	CCGC	4 cut(s)	966, 1130, 1338, 2417
BspANI	GGCC	9 cut(s)	141, 255, 319, 526, 588, 1543, 1550, 1609, 2116
BspCNI	CTCAG	3 cut(s)	34, 169, 2176
BspHI	TCATGA	2 cut(s)	10, 1377
BspLI	GGNNCC	6 cut(s)	271, 429, 513, 712, 873, 2427
BspMAI	CTGCAG	2 cut(s)	1654, 2080
BspPI	GGATC	8 cut(s)	394, 422, 435, 866, 879, 1115, 1723, 2354
BspT104I	TTCGAA	1 cut(s)	289
BspTNI	GGTCTC	2 cut(s)	27, 1873
BsrDI	GCAATG	4 cut(s)	349, 678, 738, 1345
BsrFI	RCCGGY	1 cut(s)	522
BsrGI	TGTACA	2 cut(s)	410, 996
BsrI	ACTGG	6 cut(s)	367, 388, 568, 617, 1210, 1782
BssAI	RCCGGY	1 cut(s)	522
BssECI	CCNNGG	7 cut(s)	434, 527, 857, 1223, 1551, 1683, 2032
BssMI	GATC	8 cut(s)	386, 427, 829, 871, 1021, 1120, 1715, 2359
BssNAI	GTATAC	1 cut(s)	368
BssNI	GRCGYC	1 cut(s)	404
BssT1I	CCWWGG	4 cut(s)	434, 527, 1223, 1551
Bst1107I	GTATAC	1 cut(s)	368
Bst2UI	CCWGG	1 cut(s)	2034
Bst4CI	ACNGT	5 cut(s)	996, 1004, 1684, 1723, 1746
Bst6I	CTCTTC	4 cut(s)	876, 920, 2199, 2400
BstACI	GRCGYC	1 cut(s)	404
BstAPI	GCANNNNNTGC	1 cut(s)	1646
BstAUI	TGTACA	2 cut(s)	410, 996
BstBI	TTCGAA	1 cut(s)	289
BstC8I	GCNNGC	3 cut(s)	340, 524, 2010
BstDEI	CTNAG	5 cut(s)	42, 177, 539, 2184, 2302
BstDSI	CCRYGG	3 cut(s)	857, 1223, 1683
BstENI	CCTNNNNNAGG	1 cut(s)	2031
BstF5I	GGATG	6 cut(s)	31, 543, 573, 1288, 1464, 1858
BstKTI	GATC	8 cut(s)	389, 430, 832, 874, 1024, 1123, 1718, 2362
BstMAI	GTCTC	8 cut(s)	27, 111, 582, 1294, 1508, 1698, 1817, 1873
BstMBI	GATC	8 cut(s)	386, 427, 829, 871, 1021, 1120, 1715, 2359
BstMWI	GCNNNNNNNGC	6 cut(s)	95, 339, 378, 1646, 1655, 2081
BstNI	CCWGG	1 cut(s)	2034
BstPAI	GACNNNNGTC	1 cut(s)	516
BstSCI	CCNGG	3 cut(s)	546, 1604, 2032
BstSFI	CTRYAG	3 cut(s)	750, 1650, 2076
BstV1I	GCAGC	7 cut(s)	1153, 1636, 1642, 1664, 1748, 2059, 2062
BstV2I	GAAGAC	3 cut(s)	678, 1310, 2249
BstX2I	RGATCY	4 cut(s)	386, 427, 871, 1715
BstXI	CCANNNNNNTGG	2 cut(s)	149, 662
BstYI	RGATCY	4 cut(s)	386, 427, 871, 1715
BstZ17I	GTATAC	1 cut(s)	368
Bsu36I	CCTNAGG	1 cut(s)	2184
BsuI	GTATCC	4 cut(s)	479, 738, 1424, 1528
BsuRI	GGCC	9 cut(s)	141, 255, 319, 526, 588, 1543, 1550, 1609, 2116
BtgI	CCRYGG	3 cut(s)	857, 1223, 1683
BtsCI	GGATG	6 cut(s)	31, 543, 573, 1288, 1464, 1858
BtsIMutI	CAGTG	4 cut(s)	360, 381, 825, 1775
Cac8I	GCNNGC	3 cut(s)	340, 524, 2010
CciI	TCATGA	2 cut(s)	10, 1377
Cfr10I	RCCGGY	1 cut(s)	522
Cfr13I	GGNCC	4 cut(s)	317, 511, 586, 1541
CseI	GACGC	3 cut(s)	393, 672, 2078
Csp6I	GTAC	5 cut(s)	411, 997, 1070, 1093, 1816
CviQI	GTAC	5 cut(s)	411, 997, 1070, 1093, 1816
DdeI	CTNAG	5 cut(s)	42, 177, 539, 2184, 2302
DpnI	GATC	8 cut(s)	388, 429, 831, 873, 1023, 1122, 1717, 2361
DpnII	GATC	8 cut(s)	386, 427, 829, 871, 1021, 1120, 1715, 2359
DriI	GACNNNNNGTC	2 cut(s)	1735, 2194
EaeI	YGGCCR	2 cut(s)	139, 253
Eam1104I	CTCTTC	4 cut(s)	876, 920, 2199, 2400
Eam1105I	GACNNNNNGTC	2 cut(s)	1735, 2194
EarI	CTCTTC	4 cut(s)	876, 920, 2199, 2400
Ecl136II	GAGCTC	1 cut(s)	1971
Eco130I	CCWWGG	4 cut(s)	434, 527, 1223, 1551
Eco24I	GRGCYC	2 cut(s)	1973, 2180
Eco31I	GGTCTC	2 cut(s)	27, 1873
Eco47I	GGWCC	1 cut(s)	511
Eco53kI	GAGCTC	1 cut(s)	1971
Eco57I	CTGAAG	5 cut(s)	144, 147, 932, 1832, 2295
Eco81I	CCTNAGG	1 cut(s)	2184
EcoICRI	GAGCTC	1 cut(s)	1971
EcoNI	CCTNNNNNAGG	1 cut(s)	2031
EcoO109I	RGGNCCY	1 cut(s)	511
EcoRI	GAATTC	1 cut(s)	852
EcoRII	CCWGG	1 cut(s)	2032
EcoT14I	CCWWGG	4 cut(s)	434, 527, 1223, 1551
EcoT38I	GRGCYC	2 cut(s)	1973, 2180
ErhI	CCWWGG	4 cut(s)	434, 527, 1223, 1551
Esp3I	CGTCTC	1 cut(s)	1508
FalI	AAGNNNNNCTT	2 cut(s)	873, 905
FaqI	GGGAC	2 cut(s)	1688, 2015
FauI	CCCGC	1 cut(s)	959
FblI	GTMKAC	2 cut(s)	367, 1917
Fnu4HI	GCNGC	8 cut(s)	1167, 1338, 1650, 1653, 1656, 1762, 2073, 2076
FokI	GGATG	6 cut(s)	18, 530, 580, 1295, 1471, 1865
FriOI	GRGCYC	2 cut(s)	1973, 2180
Fsp4HI	GCNGC	8 cut(s)	1167, 1338, 1650, 1653, 1656, 1762, 2073, 2076
FspBI	CTAG	2 cut(s)	528, 2088
GluI	GCNGC	8 cut(s)	1167, 1338, 1650, 1653, 1656, 1762, 2073, 2076
GsaI	CCCAGC	2 cut(s)	338, 802
GsuI	CTGGAG	1 cut(s)	634
HaeIII	GGCC	9 cut(s)	141, 255, 319, 526, 588, 1543, 1550, 1609, 2116
HapII	CCGG	3 cut(s)	523, 548, 1606
HgaI	GACGC	3 cut(s)	393, 672, 2078
Hin1I	GRCGYC	1 cut(s)	404
HincII	GTYRAC	1 cut(s)	1876
HindII	GTYRAC	1 cut(s)	1876
HindIII	AAGCTT	1 cut(s)	914
HinfI	GANTC	7 cut(s)	260, 893, 1787, 1807, 1895, 2124, 2252
HpaII	CCGG	3 cut(s)	523, 548, 1606
HphI	GGTGA	5 cut(s)	143, 1127, 1313, 1579, 2431
Hpy166II	GTNNAC	6 cut(s)	360, 368, 937, 1587, 1876, 1918
Hpy8I	GTNNAC	6 cut(s)	360, 368, 937, 1587, 1876, 1918
HpyCH4III	ACNGT	5 cut(s)	996, 1004, 1684, 1723, 1746
HpyCH4IV	ACGT	2 cut(s)	1158, 1517
HpyF10VI	GCNNNNNNNGC	6 cut(s)	95, 339, 378, 1646, 1655, 2081
HpyF3I	CTNAG	5 cut(s)	42, 177, 539, 2184, 2302
HpySE526I	ACGT	2 cut(s)	1158, 1517
Hsp92I	GRCGYC	1 cut(s)	404
KroI	GCCGGC	1 cut(s)	522
KroNI	GCCGGC	1 cut(s)	524
Kzo9I	GATC	8 cut(s)	386, 427, 829, 871, 1021, 1120, 1715, 2359
LmnI	GCTCC	7 cut(s)	275, 694, 716, 841, 958, 1769, 1976
Lsp1109I	GCAGC	7 cut(s)	1153, 1636, 1642, 1664, 1748, 2059, 2062
LweI	GCATC	5 cut(s)	265, 552, 1449, 1459, 2385
MaeI	CTAG	2 cut(s)	528, 2088
MaeII	ACGT	2 cut(s)	1158, 1517
MaeIII	GTNAC	5 cut(s)	131, 456, 667, 823, 1201
MalI	GATC	8 cut(s)	388, 429, 831, 873, 1023, 1122, 1717, 2361
MboI	GATC	8 cut(s)	386, 427, 829, 871, 1021, 1120, 1715, 2359
MfeI	CAATTG	1 cut(s)	1325
MflI	RGATCY	4 cut(s)	386, 427, 871, 1715
MhlI	GDGCHC	4 cut(s)	1973, 2066, 2180, 2262
MlsI	TGGCCA	2 cut(s)	141, 255
MluCI	AATT	8 cut(s)	349, 450, 852, 950, 1087, 1325, 1372, 1445
MluNI	TGGCCA	2 cut(s)	141, 255
MlyI	GAGTC	1 cut(s)	254
MmeI	TCCRAC	1 cut(s)	2197
Mox20I	TGGCCA	2 cut(s)	141, 255
MroNI	GCCGGC	1 cut(s)	522
MroXI	GAANNNNTTC	1 cut(s)	1668
MscI	TGGCCA	2 cut(s)	141, 255
MseI	TTAA	2 cut(s)	453, 1478
MslI	CAYNNNNRTG	3 cut(s)	147, 1592, 1682
Msp20I	TGGCCA	2 cut(s)	141, 255
MspA1I	CMGCKG	1 cut(s)	1655
MspI	CCGG	3 cut(s)	523, 548, 1606
MspR9I	CCNGG	3 cut(s)	548, 1606, 2034
MunI	CAATTG	1 cut(s)	1325
Mva1269I	GAATGC	2 cut(s)	2328, 2419
MvaI	CCWGG	1 cut(s)	2034
MwoI	GCNNNNNNNGC	6 cut(s)	95, 339, 378, 1646, 1655, 2081
NaeI	GCCGGC	1 cut(s)	524
NciI	CCSGG	2 cut(s)	548, 1606
NcoI	CCATGG	1 cut(s)	1223
NdeII	GATC	8 cut(s)	386, 427, 829, 871, 1021, 1120, 1715, 2359
NgoMIV	GCCGGC	1 cut(s)	522
NlaIV	GGNNCC	6 cut(s)	271, 429, 513, 712, 873, 2427
NmuCI	GTSAC	2 cut(s)	131, 823
NspV	TTCGAA	1 cut(s)	289
PagI	TCATGA	2 cut(s)	10, 1377
PcsI	WCGNNNNNNNCGW	1 cut(s)	1440
PctI	GAATGC	2 cut(s)	2328, 2419
PdiI	GCCGGC	1 cut(s)	524
PdmI	GAANNNNTTC	1 cut(s)	1668
PfeI	GAWTC	6 cut(s)	893, 1787, 1807, 1895, 2124, 2252
PflFI	GACNNNGTC	1 cut(s)	1314
PfoI	TCCNGGA	1 cut(s)	546
PkrI	GCNGC	8 cut(s)	1168, 1339, 1651, 1654, 1657, 1763, 2074, 2077
PleI	GAGTC	1 cut(s)	254
PpsI	GAGTC	1 cut(s)	254
PpuMI	RGGWCCY	1 cut(s)	511
PshAI	GACNNNNGTC	1 cut(s)	516
Psp124BI	GAGCTC	1 cut(s)	1973
Psp5II	RGGWCCY	1 cut(s)	511
Psp6I	CCWGG	1 cut(s)	2032
PspFI	CCCAGC	2 cut(s)	334, 798
PspGI	CCWGG	1 cut(s)	2032
PspN4I	GGNNCC	6 cut(s)	271, 429, 513, 712, 873, 2427
PspPI	GGNCC	4 cut(s)	317, 511, 586, 1541
PspPPI	RGGWCCY	1 cut(s)	511
PstI	CTGCAG	2 cut(s)	1654, 2080
PsuI	RGATCY	4 cut(s)	386, 427, 871, 1715
PsyI	GACNNNGTC	1 cut(s)	1314
PvuII	CAGCTG	1 cut(s)	1655
RsaI	GTAC	5 cut(s)	412, 998, 1071, 1094, 1817
RsaNI	GTAC	5 cut(s)	411, 997, 1070, 1093, 1816
RseI	CAYNNNNRTG	3 cut(s)	147, 1592, 1682
SacI	GAGCTC	1 cut(s)	1973
SaqAI	TTAA	2 cut(s)	453, 1478
SatI	GCNGC	8 cut(s)	1167, 1338, 1650, 1653, 1656, 1762, 2073, 2076
Sau3AI	GATC	8 cut(s)	386, 427, 829, 871, 1021, 1120, 1715, 2359
Sau96I	GGNCC	4 cut(s)	317, 511, 586, 1541
SchI	GAGTC	1 cut(s)	254
ScrFI	CCNGG	3 cut(s)	548, 1606, 2034
SduI	GDGCHC	4 cut(s)	1973, 2066, 2180, 2262
SfaNI	GCATC	5 cut(s)	265, 552, 1449, 1459, 2385
SfcI	CTRYAG	3 cut(s)	750, 1650, 2076
SfuI	TTCGAA	1 cut(s)	289
SinI	GGWCC	1 cut(s)	511
SmiMI	CAYNNNNRTG	3 cut(s)	147, 1592, 1682
SmlI	CTYRAG	2 cut(s)	1355, 1820
SmoI	CTYRAG	2 cut(s)	1355, 1820
Sse9I	AATT	8 cut(s)	349, 450, 852, 950, 1087, 1325, 1372, 1445
SsiI	CCGC	4 cut(s)	966, 1130, 1338, 2417
SspMI	CTAG	2 cut(s)	528, 2088
SstI	GAGCTC	1 cut(s)	1973
StyD4I	CCNGG	3 cut(s)	546, 1604, 2032
StyI	CCWWGG	4 cut(s)	434, 527, 1223, 1551
TaaI	ACNGT	5 cut(s)	996, 1004, 1684, 1723, 1746
TaiI	ACGT	2 cut(s)	1161, 1520
TaqI	TCGA	5 cut(s)	289, 807, 1662, 1893, 2334
TasI	AATT	8 cut(s)	349, 450, 852, 950, 1087, 1325, 1372, 1445
TatI	WGTACW	3 cut(s)	410, 996, 1092
TauI	GCSGC	1 cut(s)	1340
TfiI	GAWTC	6 cut(s)	893, 1787, 1807, 1895, 2124, 2252
Tru1I	TTAA	2 cut(s)	453, 1478
Tru9I	TTAA	2 cut(s)	453, 1478
TscAI	CASTG	4 cut(s)	367, 388, 832, 1782
TseFI	GTSAC	2 cut(s)	131, 823
TseI	GCWGC	7 cut(s)	1166, 1649, 1652, 1655, 1761, 2072, 2075
Tsp45I	GTSAC	2 cut(s)	131, 823
TspDTI	ATGAA	8 cut(s)	27, 108, 1366, 1394, 1544, 1848, 2265, 2418
TspGWI	ACGGA	1 cut(s)	846
TspRI	CASTG	4 cut(s)	367, 388, 832, 1782
Tth111I	GACNNNGTC	1 cut(s)	1314
VpaK11BI	GGWCC	1 cut(s)	511
XagI	CCTNNNNNAGG	1 cut(s)	2031
XapI	RAATTY	4 cut(s)	349, 852, 1087, 1372
XcmI	CCANNNNNNNNNTGG	2 cut(s)	263, 1774
XmaJI	CCTAGG	1 cut(s)	527
XmiI	GTMKAC	2 cut(s)	367, 1917
XmnI	GAANNNNTTC	1 cut(s)	1668
XspI	CTAG	2 cut(s)	528, 2088

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.