Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0007461

Physical Location & Seq

Genomic Coordinates Reverse (-)

40137195 .. 40140533

Gene Structure 3339 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG313100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGCTGTACCATGTGTACACGTTTTATCAACTTACGGGAGCCACCTATGTGATACAGTTGCTAAAGAAATATCAGGACCCAAGTCGCCGGCCCAAGAGGGATTTAAGCACTCCTGATAAGCCCTTCACTGGGATGTTAATTTCTTTAATGGGCCGTCTTACTAGATCACATGTATGTAGGACAGTTGATTTACAAACCGTCTTATTTGTCATTTCACGCTGTGTACTGATCATGCTTTCATTACCATTGCAGCAATACTGGAGACAGGAAGTAGATAAACATGGAGGAAAGGTTGCCAACCATGTGATTGGGACCTTTGCAGGTGTGACATGCCTAATTGTGTCTCCTGCGGAACGAGAACGCGGCGGCACAAATAAACTGGCTGAAGCAATGGAGAGAGGGATACCTGTAGTAAGTGAACAGTGGCTGATTGATAGCATAGAAAGACAAGAACCCCAGCCTCTCGAAGCATATGAAATTGCTAGTGATCTTGCTCCTGATGGCAGAGGAATCCCATGGGACAAAATGGATCCCAGTGAAGAGGCAATTGAGTCACTTTCAGCAGAACTCAAGCTTTATGGGAAGAGAGCTGTCTACAAAGATACGAAACTGCAGGAGCAAGGCGGAAAAATCTTCGAGAGGGATGGGACATTGTACAACTGTGCCTTCTCACATTGTGATCTAGGACGAAAACTGAACGATTATTGCATCTTGCAACTGATTATGGTGCCAGAGAACAGCCTGAACTTGTACTACAAGAAAGGCAGAGTTGGGGATGACCCCAATGCAGAGGAAAGGCTTGAAGAATGGAAGAATGTGGATGATGCTGTGAAAGAGTTTGTTAAAATATTTGAGGAAGTAACCGGAAATGAGTTTGAACCATGGGAAAGAGAGAAGAAGATCCAGAAGAAGCCATTTAAGTTTTACCCAATAGACATGGACGATGGAGTTGAAGTAAGACATGGAGGACTTGGTCTTCGACAGCTGGGAGTTGCTGCTACACATTGCAAACTTCAGCCCGAGGTTGCAAATTTTATGAAGATCCTATGCAGTCAGGAGGTTTACAAATATGCTCTGATGGAGATGGGATTGGATGCCCCAGAATTGCCAATGGGGATGCTTACCGATGTCCACCTAAAAAGATGTGAGGATGTTCTTCAAGAGTTTGTGGAGAAACTGAAGTCAATGAAGGAATCAGGGCCAGAGTCTGAGGCTGTTTGGTCGGACTTTAGCCAAAGATGGTTTACCCTGCTGCACTCTACTAGGCCTTTCATATTCAGGAACTTCCAGGAAGTTGCAGATCATGCTGCTGCTGCACTGGAGACTGTTCGGGACATAACTCTGTCCTCACATCTTATTGGAGACATGAGTGGAGCTACCATTGATGATCCCTTGTCAGATAGATGTAGCAAATTGGGATGCTCAATCTCCCCACTTGATAAGGAATCCGATGATTACAAAATGATTCTGAAGTACCTGGACAAGACCTATGAACCTGTCAAAGTTGGAGATATTGAATACGGGGTGTCTGTGGAGAACATATTCGTTGTTGAATCAAATGCCTGTCCATCTTTGGATGAAATAAAGAAGTTGCCTAACAAATTTCTCCTATGGTGTGGGACACGGAGCTCAAATCTGATGAGGCACTTGAATAAGGGTTTCTTGCCAGCAATATGCTCTCTCCCTGTCCCAGGCTATATGTTTGGGAAAGCAATTGTTTGCTCTGATACTGCCGCAGAGGCTGCAAGGTATGGTTATACTGCTGTGGACAGACCAGAGGGTTTCTTAGTTTTGGCTGTGGCTTCTCTAGGTGAAGAGATTATTGAGTTGAAAAACCCACCAGAGGACACAAAATCTTTAGAGGACAAGAAACTTGGAGTGAAGTGCATAGGGAAAAAGAAGACTGATGAATCGGAGCACTTTGTATGGCATGATTATATCAAAGTTCCCTGTGGACGATTAGTGCCTTCAGATAATAAAGACAGCATTGTCGAGTATAACGAGTATGCTGTCTATGATCCCAAGCAGACATGCATAAGGTTCTTGGTGGGTGTGAAGTATGAAGAGAAGGATGCTGTCATGGACACCGAGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003909 GO:0003910 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006266 GO:0006271 GO:0006273 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016070 GO:0016874 GO:0016886 GO:0022616 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051103 GO:0051716 GO:0071704 GO:0090304 GO:0140097 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03410 ko04210 ko04212 ko04214 ko04217 map03410 map04210 map04212 map04214 map04217

Pfam Domains

Protein Families

BRCT BRCT_2 PADR1 PARP PARP_reg WGR

Protein Analysis

698

Amino Acids

79.21

Weight (kDa)

5.3

Isoelectric Point (pI)

42.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WGR	PF05406	219 - 297	9.3e-09	WGR domain
PARP_reg	PF02877	336 - 467	6.4e-24	Poly(ADP-ribose) polymerase, regulatory domain
PARP	PF00644	483 - 686	2.8e-50	Poly(ADP-ribose) polymerase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22470
fragaria_vesca	FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670
malus_domestica	MD03G1142500.v1.1
prunus_persica	Prupe.6G127600_v2.0.a1 Prupe.6G127600_v2.0.a1 Prupe.6G127600_v2.0.a1 Prupe.6G127600_v2.0.a1
pyrus_communis	pycom03g09710
rosa_chinensis	RchiOBHm_Chr5g0044231
rosa_laevigata	RLG00000034257
rosa_multiflora	Rmu_sc0000776.1_g000071
rosa_roxburghii	Rroxscaffold_1G00036790
rosa_rugosa	Rorug05G0212700
rosa_samantha	Rh5AG296800 Rh5BG304300 Rh5CG331300 Rh5DG313100
rosa_wichuraiana	Rw5G027490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	311
AasI	GACNNNNNNGTC	1 cut(s)	1988
Acc36I	ACCTGC	1 cut(s)	311
AccB1I	GGYRCC	1 cut(s)	727
AccI	GTMKAC	1 cut(s)	594
AccII	CGCG	1 cut(s)	363
AciI	CCGC	5 cut(s)	350, 363, 366, 624, 1734
AclWI	GGATC	6 cut(s)	524, 537, 895, 1036, 1382, 2012
AcsI	RAATTY	2 cut(s)	1030, 1601
AcuI	CTGAAG	5 cut(s)	405, 998, 1199, 1490, 1953
AdeI	CACNNNGTG	2 cut(s)	221, 677
AfaI	GTAC	6 cut(s)	8, 17, 225, 656, 752, 1475
AfiI	CCNNNNNNNGG	4 cut(s)	128, 129, 1691, 1843
AflIII	ACRYGT	2 cut(s)	18, 169
AgsI	TTSAA	8 cut(s)	803, 878, 953, 1160, 1517, 1553, 1651, 1831
AjnI	CCWGG	3 cut(s)	1287, 1476, 1690
AleI	CACNNNNGTG	1 cut(s)	47
AluBI	AGCT	5 cut(s)	574, 590, 985, 1376, 1629
AluI	AGCT	5 cut(s)	574, 590, 985, 1376, 1629
Alw21I	GWGCWC	2 cut(s)	1631, 1920
Alw26I	GTCTC	4 cut(s)	256, 348, 1316, 1356
AlwI	GGATC	6 cut(s)	524, 537, 895, 1036, 1382, 2012
AlwNI	CAGNNNCTG	3 cut(s)	427, 1208, 1742
Ama87I	CYCGRG	1 cut(s)	1019
AoxI	GGCC	4 cut(s)	89, 151, 1199, 1265
ApeKI	GCWGC	7 cut(s)	250, 995, 1252, 1307, 1310, 1313, 1742
ApoI	RAATTY	2 cut(s)	1030, 1601
ArsI	GACNNNNNNTTYG	2 cut(s)	960, 992
Asp700I	GAANNNNTTC	1 cut(s)	1541
AspS9I	GGNCC	5 cut(s)	76, 90, 151, 312, 1199
AsuHPI	GGTGA	1 cut(s)	1823
AvaI	CYCGRG	1 cut(s)	1019
AvaII	GGWCC	2 cut(s)	76, 312
BamHI	GGATCC	1 cut(s)	529
BanI	GGYRCC	1 cut(s)	727
BanII	GRGCYC	1 cut(s)	1631
BbsI	GAAGAC	2 cut(s)	968, 1907
Bbv12I	GWGCWC	2 cut(s)	1631, 1920
BbvI	GCAGC	7 cut(s)	262, 982, 1239, 1294, 1297, 1300, 1729
BccI	CCATC	7 cut(s)	494, 638, 938, 1072, 1078, 1233, 1576
BceAI	ACGGC	1 cut(s)	138
BciT130I	CCWGG	3 cut(s)	1289, 1478, 1692
BciVI	GTATCC	1 cut(s)	396
BclI	TGATCA	1 cut(s)	228
BcoDI	GTCTC	4 cut(s)	256, 348, 1316, 1356
BfaI	CTAG	5 cut(s)	162, 483, 683, 1263, 1808
BfmI	CTRYAG	2 cut(s)	408, 611
BfuAI	ACCTGC	1 cut(s)	311
BfuI	GTATCC	1 cut(s)	396
BglI	GCCNNNNNGGC	1 cut(s)	1739
Bme1390I	CCNGG	3 cut(s)	1289, 1478, 1692
Bme18I	GGWCC	2 cut(s)	76, 312
BmeT110I	CYCGRG	1 cut(s)	1019
BmgT120I	GGNCC	5 cut(s)	76, 90, 151, 312, 1199
BmiI	GGNNCC	5 cut(s)	40, 78, 313, 531, 729
BmrFI	CCNGG	3 cut(s)	1289, 1478, 1692
BmrI	ACTGGG	2 cut(s)	138, 528
BmsI	GCATC	6 cut(s)	717, 814, 1084, 1107, 1409, 2062
BmuI	ACTGGG	2 cut(s)	138, 528
BoxI	GACNNNNGTC	1 cut(s)	81
BpiI	GAAGAC	2 cut(s)	968, 1907
BpmI	CTGGAG	2 cut(s)	280, 1340
BpuEI	CTTGAG	1 cut(s)	554
BsaJI	CCNNGG	5 cut(s)	515, 881, 1020, 1690, 2088
BsaWI	WCCGGW	1 cut(s)	863
BsaXI	ACNNNNNCTCC	4 cut(s)	276, 306, 939, 969
Bsc4I	CCNNNNNNNGG	4 cut(s)	128, 129, 1691, 1843
Bse118I	RCCGGY	1 cut(s)	87
Bse1I	ACTGG	5 cut(s)	133, 263, 384, 534, 1323
Bse3DI	GCAATG	3 cut(s)	245, 396, 1003
BseBI	CCWGG	3 cut(s)	1289, 1478, 1692
BseDI	CCNNGG	5 cut(s)	515, 881, 1020, 1690, 2088
BseLI	CCNNNNNNNGG	4 cut(s)	128, 129, 1691, 1843
BseMI	GCAATG	3 cut(s)	245, 396, 1003
BseMII	CTCAG	1 cut(s)	1200
BseNI	ACTGG	5 cut(s)	133, 263, 384, 534, 1323
BseXI	GCAGC	7 cut(s)	262, 982, 1239, 1294, 1297, 1300, 1729
BseYI	CCCAGC	2 cut(s)	456, 985
BsgI	GTGCAG	2 cut(s)	1238, 1299
Bsh1236I	CGCG	1 cut(s)	363
BshFI	GGCC	4 cut(s)	91, 153, 1201, 1267
BshNI	GGYRCC	1 cut(s)	727
BsiHKAI	GWGCWC	2 cut(s)	1631, 1920
BsiHKCI	CYCGRG	1 cut(s)	1019
BsiSI	CCGG	2 cut(s)	88, 864
BslFI	GGGAC	6 cut(s)	325, 533, 661, 1346, 1633, 1673
BslI	CCNNNNNNNGG	4 cut(s)	128, 129, 1691, 1843
BsmAI	GTCTC	4 cut(s)	256, 348, 1316, 1356
BsmFI	GGGAC	6 cut(s)	325, 533, 661, 1346, 1633, 1673
BsnI	GGCC	4 cut(s)	91, 153, 1201, 1267
BsoBI	CYCGRG	1 cut(s)	1019
Bsp1286I	GDGCHC	2 cut(s)	1631, 1920
Bsp1407I	TGTACA	2 cut(s)	15, 654
Bsp19I	CCATGG	2 cut(s)	515, 881
BspACI	CCGC	5 cut(s)	350, 363, 366, 624, 1734
BspANI	GGCC	4 cut(s)	91, 153, 1201, 1267
BspCNI	CTCAG	1 cut(s)	1201
BspFNI	CGCG	1 cut(s)	363
BspLI	GGNNCC	5 cut(s)	40, 78, 313, 531, 729
BspMAI	CTGCAG	1 cut(s)	615
BspMI	ACCTGC	1 cut(s)	311
BspPI	GGATC	6 cut(s)	524, 537, 895, 1036, 1382, 2012
BspT107I	GGYRCC	1 cut(s)	727
BsrDI	GCAATG	3 cut(s)	245, 396, 1003
BsrFI	RCCGGY	1 cut(s)	87
BsrGI	TGTACA	2 cut(s)	15, 654
BsrI	ACTGG	5 cut(s)	133, 263, 384, 534, 1323
BssAI	RCCGGY	1 cut(s)	87
BssECI	CCNNGG	5 cut(s)	515, 881, 1020, 1690, 2088
BssT1I	CCWWGG	2 cut(s)	515, 881
Bst2UI	CCWGG	3 cut(s)	1289, 1478, 1692
Bst4CI	ACNGT	6 cut(s)	57, 184, 199, 423, 662, 1327
Bst6I	CTCTTC	4 cut(s)	534, 578, 1809, 2058
BstAPI	GCANNNNNTGC	2 cut(s)	1304, 1742
BstAUI	TGTACA	2 cut(s)	15, 654
BstC8I	GCNNGC	2 cut(s)	89, 1668
BstDEI	CTNAG	2 cut(s)	1209, 1786
BstDSI	CCRYGG	2 cut(s)	515, 881
BstENI	CCTNNNNNAGG	1 cut(s)	1689
BstFNI	CGCG	1 cut(s)	363
BstMAI	GTCTC	4 cut(s)	256, 348, 1316, 1356
BstMWI	GCNNNNNNNGC	4 cut(s)	1304, 1313, 1739, 1742
BstNI	CCWGG	3 cut(s)	1289, 1478, 1692
BstNSI	RCATGY	3 cut(s)	173, 333, 2034
BstPAI	GACNNNNGTC	1 cut(s)	81
BstSCI	CCNGG	3 cut(s)	1287, 1476, 1690
BstSFI	CTRYAG	2 cut(s)	408, 611
BstUI	CGCG	1 cut(s)	363
BstV1I	GCAGC	7 cut(s)	262, 982, 1239, 1294, 1297, 1300, 1729
BstV2I	GAAGAC	2 cut(s)	968, 1907
BstX2I	RGATCY	3 cut(s)	529, 900, 1041
BstXI	CCANNNNNNTGG	1 cut(s)	308
BstYI	RGATCY	3 cut(s)	529, 900, 1041
BsuI	GTATCC	1 cut(s)	396
BsuRI	GGCC	4 cut(s)	91, 153, 1201, 1267
BtgI	CCRYGG	2 cut(s)	515, 881
BtsIMutI	CAGTG	4 cut(s)	126, 428, 541, 1316
BveI	ACCTGC	1 cut(s)	311
Cac8I	GCNNGC	2 cut(s)	89, 1668
CaiI	CAGNNNCTG	3 cut(s)	427, 1208, 1742
Cfr10I	RCCGGY	1 cut(s)	87
Cfr13I	GGNCC	5 cut(s)	76, 90, 151, 312, 1199
Csp6I	GTAC	6 cut(s)	7, 16, 224, 655, 751, 1474
CviQI	GTAC	6 cut(s)	7, 16, 224, 655, 751, 1474
DdeI	CTNAG	2 cut(s)	1209, 1786
DraIII	CACNNNGTG	2 cut(s)	221, 677
DrdI	GACNNNNNNGTC	1 cut(s)	1988
DseDI	GACNNNNNNGTC	1 cut(s)	1988
Eam1104I	CTCTTC	4 cut(s)	534, 578, 1809, 2058
EarI	CTCTTC	4 cut(s)	534, 578, 1809, 2058
EciI	GGCGGA	1 cut(s)	639
Ecl136II	GAGCTC	1 cut(s)	1629
Eco130I	CCWWGG	2 cut(s)	515, 881
Eco147I	AGGCCT	1 cut(s)	1267
Eco24I	GRGCYC	1 cut(s)	1631
Eco47I	GGWCC	2 cut(s)	76, 312
Eco53kI	GAGCTC	1 cut(s)	1629
Eco57I	CTGAAG	5 cut(s)	405, 998, 1199, 1490, 1953
Eco88I	CYCGRG	1 cut(s)	1019
EcoICRI	GAGCTC	1 cut(s)	1629
EcoNI	CCTNNNNNAGG	1 cut(s)	1689
EcoO109I	RGGNCCY	2 cut(s)	76, 312
EcoRII	CCWGG	3 cut(s)	1287, 1476, 1690
EcoT14I	CCWWGG	2 cut(s)	515, 881
EcoT22I	ATGCAT	1 cut(s)	2036
EcoT38I	GRGCYC	1 cut(s)	1631
ErhI	CCWWGG	2 cut(s)	515, 881
FalI	AAGNNNNNCTT	2 cut(s)	1646, 1678
FaqI	GGGAC	6 cut(s)	325, 533, 661, 1346, 1633, 1673
FauNDI	CATATG	1 cut(s)	472
FbaI	TGATCA	1 cut(s)	228
FblI	GTMKAC	1 cut(s)	594
FriOI	GRGCYC	1 cut(s)	1631
FspBI	CTAG	5 cut(s)	162, 483, 683, 1263, 1808
GsaI	CCCAGC	2 cut(s)	460, 989
GsuI	CTGGAG	2 cut(s)	280, 1340
HaeIII	GGCC	4 cut(s)	91, 153, 1201, 1267
HapII	CCGG	2 cut(s)	88, 864
HindIII	AAGCTT	1 cut(s)	572
HinfI	GANTC	8 cut(s)	510, 551, 1193, 1205, 1445, 1465, 1553, 1910
HpaII	CCGG	2 cut(s)	88, 864
HphI	GGTGA	1 cut(s)	1823
HpyAV	CCTTC	5 cut(s)	133, 676, 1183, 1977, 2062
HpyCH4III	ACNGT	6 cut(s)	57, 184, 199, 423, 662, 1327
HpyCH4IV	ACGT	1 cut(s)	20
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1304, 1313, 1739, 1742
HpyF3I	CTNAG	2 cut(s)	1209, 1786
HpySE526I	ACGT	1 cut(s)	20
KroI	GCCGGC	1 cut(s)	87
KroNI	GCCGGC	1 cut(s)	89
Ksp22I	TGATCA	1 cut(s)	228
LmnI	GCTCC	6 cut(s)	38, 499, 616, 1373, 1626, 1915
Lsp1109I	GCAGC	7 cut(s)	262, 982, 1239, 1294, 1297, 1300, 1729
LweI	GCATC	6 cut(s)	717, 814, 1084, 1107, 1409, 2062
MaeI	CTAG	5 cut(s)	162, 483, 683, 1263, 1808
MaeII	ACGT	1 cut(s)	20
MaeIII	GTNAC	3 cut(s)	325, 552, 859
MfeI	CAATTG	2 cut(s)	546, 1713
MflI	RGATCY	3 cut(s)	529, 900, 1041
MhlI	GDGCHC	2 cut(s)	1631, 1920
MluCI	AATT	9 cut(s)	138, 336, 477, 546, 1030, 1103, 1412, 1601, 1713
MlyI	GAGTC	2 cut(s)	560, 1214
MmeI	TCCRAC	2 cut(s)	1203, 1486
Mph1103I	ATGCAT	1 cut(s)	2036
MroNI	GCCGGC	1 cut(s)	87
MroXI	GAANNNNTTC	1 cut(s)	1541
MseI	TTAA	5 cut(s)	104, 137, 146, 843, 918
MslI	CAYNNNNRTG	3 cut(s)	47, 131, 172
MspA1I	CMGCKG	1 cut(s)	985
MspI	CCGG	2 cut(s)	88, 864
MspR9I	CCNGG	3 cut(s)	1289, 1478, 1692
MunI	CAATTG	2 cut(s)	546, 1713
MvaI	CCWGG	3 cut(s)	1289, 1478, 1692
MvnI	CGCG	1 cut(s)	363
MwoI	GCNNNNNNNGC	4 cut(s)	1304, 1313, 1739, 1742
NaeI	GCCGGC	1 cut(s)	89
NcoI	CCATGG	2 cut(s)	515, 881
NdeI	CATATG	1 cut(s)	472
NgoMIV	GCCGGC	1 cut(s)	87
NlaIV	GGNNCC	5 cut(s)	40, 78, 313, 531, 729
NmuCI	GTSAC	2 cut(s)	325, 552
NsiI	ATGCAT	1 cut(s)	2036
NspI	RCATGY	3 cut(s)	173, 333, 2034
OliI	CACNNNNGTG	1 cut(s)	47
PaqCI	CACCTGC	1 cut(s)	311
PceI	AGGCCT	1 cut(s)	1267
PciI	ACATGT	1 cut(s)	169
PcsI	WCGNNNNNNNCGW	1 cut(s)	1998
PdiI	GCCGGC	1 cut(s)	89
PdmI	GAANNNNTTC	1 cut(s)	1541
PfeI	GAWTC	6 cut(s)	510, 1193, 1445, 1465, 1553, 1910
PflFI	GACNNNGTC	1 cut(s)	972
PfoI	TCCNGGA	1 cut(s)	1287
PleI	GAGTC	2 cut(s)	559, 1213
PpsI	GAGTC	2 cut(s)	559, 1213
PpuMI	RGGWCCY	2 cut(s)	76, 312
PscI	ACATGT	1 cut(s)	169
PshAI	GACNNNNGTC	1 cut(s)	81
Psp124BI	GAGCTC	1 cut(s)	1631
Psp5II	RGGWCCY	2 cut(s)	76, 312
Psp6I	CCWGG	3 cut(s)	1287, 1476, 1690
PspFI	CCCAGC	2 cut(s)	456, 985
PspGI	CCWGG	3 cut(s)	1287, 1476, 1690
PspN4I	GGNNCC	5 cut(s)	40, 78, 313, 531, 729
PspPI	GGNCC	5 cut(s)	76, 90, 151, 312, 1199
PspPPI	RGGWCCY	2 cut(s)	76, 312
PsrI	GAACNNNNNNTAC	2 cut(s)	737, 769
PstI	CTGCAG	1 cut(s)	615
PstNI	CAGNNNCTG	3 cut(s)	427, 1208, 1742
PsuI	RGATCY	3 cut(s)	529, 900, 1041
PsyI	GACNNNGTC	1 cut(s)	972
PvuII	CAGCTG	1 cut(s)	985
RsaI	GTAC	6 cut(s)	8, 17, 225, 656, 752, 1475
RsaNI	GTAC	6 cut(s)	7, 16, 224, 655, 751, 1474
RseI	CAYNNNNRTG	3 cut(s)	47, 131, 172
SacI	GAGCTC	1 cut(s)	1631
SaqAI	TTAA	5 cut(s)	104, 137, 146, 843, 918
Sau96I	GGNCC	5 cut(s)	76, 90, 151, 312, 1199
SchI	GAGTC	2 cut(s)	560, 1214
ScrFI	CCNGG	3 cut(s)	1289, 1478, 1692
SduI	GDGCHC	2 cut(s)	1631, 1920
SfaNI	GCATC	6 cut(s)	717, 814, 1084, 1107, 1409, 2062
SfcI	CTRYAG	2 cut(s)	408, 611
SinI	GGWCC	2 cut(s)	76, 312
SmiMI	CAYNNNNRTG	3 cut(s)	47, 131, 172
SmlI	CTYRAG	1 cut(s)	569
SmoI	CTYRAG	1 cut(s)	569
Sse9I	AATT	9 cut(s)	138, 336, 477, 546, 1030, 1103, 1412, 1601, 1713
SseBI	AGGCCT	1 cut(s)	1267
SsiI	CCGC	5 cut(s)	350, 363, 366, 624, 1734
SspI	AATATT	1 cut(s)	849
SspMI	CTAG	5 cut(s)	162, 483, 683, 1263, 1808
SstI	GAGCTC	1 cut(s)	1631
StuI	AGGCCT	1 cut(s)	1267
StyD4I	CCNGG	3 cut(s)	1287, 1476, 1690
StyI	CCWWGG	2 cut(s)	515, 881
TaaI	ACNGT	6 cut(s)	57, 184, 199, 423, 662, 1327
TaiI	ACGT	1 cut(s)	23
TaqI	TCGA	4 cut(s)	465, 636, 979, 1992
TasI	AATT	9 cut(s)	138, 336, 477, 546, 1030, 1103, 1412, 1601, 1713
TatI	WGTACW	4 cut(s)	15, 223, 654, 750
TauI	GCSGC	3 cut(s)	366, 369, 1736
TfiI	GAWTC	6 cut(s)	510, 1193, 1445, 1465, 1553, 1910
Tru1I	TTAA	5 cut(s)	104, 137, 146, 843, 918
Tru9I	TTAA	5 cut(s)	104, 137, 146, 843, 918
TscAI	CASTG	4 cut(s)	133, 428, 541, 1323
TseFI	GTSAC	2 cut(s)	325, 552
TseI	GCWGC	7 cut(s)	250, 995, 1252, 1307, 1310, 1313, 1742
Tsp45I	GTSAC	2 cut(s)	325, 552
TspDTI	ATGAA	9 cut(s)	228, 489, 1052, 1202, 1261, 1506, 1593, 1923, 2076
TspGWI	ACGGA	1 cut(s)	1639
TspRI	CASTG	4 cut(s)	133, 428, 541, 1323
Tth111I	GACNNNGTC	1 cut(s)	972
VpaK11BI	GGWCC	2 cut(s)	76, 312
XagI	CCTNNNNNAGG	1 cut(s)	1689
XapI	RAATTY	2 cut(s)	1030, 1601
XceI	RCATGY	3 cut(s)	173, 333, 2034
XmiI	GTMKAC	1 cut(s)	594
XmnI	GAANNNNTTC	1 cut(s)	1541
XspI	CTAG	5 cut(s)	162, 483, 683, 1263, 1808
Zsp2I	ATGCAT	1 cut(s)	2036

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.