Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0007461

Physical Location & Seq

Genomic Coordinates Reverse (-)

8436409 .. 8440686

Gene Structure 4278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g09710.16

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGTTTCTTTGTTACTTGGTTTTGTGTAAACTGAACATTATCAAGGTCCATGAGACAAGGTCTCATTCTCATGGAAATGCTGAAGAGGACAAAGTGACGACGAGGAAGCAGAAAGCCGAGAGCAAGGCTCATGAGGCAGAGCAGTCTCCAAAGAAGGCCAAATCTGAAGGTGACAACGGCAATACAAATGGAAAATCCTCGGAGAAATTAGTTGCCGAGTATGAGAAGCTCTGCGCAGCGGTCAAGGACAACCTTTCAACCGAACAGATGCGCGAAATCTTGGAAGCTAATGGCCAGGACTCCTCCGGCTCTGATTCCACCATTCTACGGAAATGTCAAGACTTGCTGTTTTATGGTCCATTAGATAAATGTCCCGCATGCAATGGCGATTTGGAGTTCAGGGTTATACGCTATTCTTGCACTGGATCTTATAGTGAGTGGGCAACTTGTACATTTATTACAATGGATCCGCCAAGGAAACTAGAACCAATCAAGTTGCCAGATAGTGTCCTCAACTCTCCTGCATCCGATTTGCTAAAGGATTACGAGGACCCAGGTCGCCGTCCTCAGAAGCATTTAAGCATCCCAGTTAAGCCTTTTACTGGGATGTTGATGTCGCTTATGGGCCGTCTTAGTGCATCTCATCAATACTGGAGAAAAGAAATAGAAAAACACGGAGGAAAAGTTGCCAACCATGTGATTGGTGTAACTTGCCTGATTGCATCCCCTGCGGAGCGAGACAGAGGTGGCACGGGTAAACTTGCTGAAGCAATGGAAAGAGGAATTCCTGTAATAAGCGAAGCATGGCTGAAAGACAGCATCGAGAAACAAGAACCCCAGCCTCTCGAAGCGTATGATATTGTTAGTGATCTTGCTCCCGATGGCAGAGGAGTTCCATGGTACAAAATGGATCCAAGCGAAGAGGCACTTGAGTCCCTTTCAACAGAACTGAAGATATATGGGAAGAGAAGTGTCCACAAGGATAGTAAATTGCGGGAGCGAGACGGGAAAATCTTTGAGAGAGATGGCATATTATACAACTGCGCCTTGTCTCGTTGTGATCTGGGCAGAAAACTGAACGATTATTGCATCATGCAACTTATTACAGTACCACAGTGCAACCTGCATTTGTACTACAAGAAAGGAAAAGCTGGCGATGACCCTAATGCGGAGGAAAGGCTTGAAGAGTGGGATAATGTGGACTACGCTGTCATGGAGTTTGTGAGGCTCTTCGAGGAAGCAACCGGAAATGAGTTTGAACCATGGGAAAGAGAGAAGAAAATCCAGAAGAAGCCGCTGAAGTTTTACCCTATGGACATGGATGACGGAGTTGATGTGAGGCATGGAGGGCTTGGGCTTCACCAATTGGGAGTTGCTGCCACACATTGCAAACTTGAGCCGATGGTTGCAAATTTCATGAAGGTTTTATGCAGTCAAGAGATTTACAAATATGCTTTAATGGAAATGGGTTATGACGCGCCCGAACTTCCAATGGGGATGCTTTCCGTTGTCCACCTAAAACGATGTGAGGAGGTTCTTCAGAAATTCGTGGAGACATTGAAATCAATGAAGGATGCAGGGCCGAAGGCTGAGGCAGTTTGGTCAGATTTTAGTCAACGATGGTTCACCCTTATGCACTCTACTAGACCTTTTATCTTCAGAGACTATCAGGAACTTGCAGATAATGCTGCAGCTGCACTTGAAACTATTCGAGACATAACCATGGCTTCCCATCTCATTGGAGACATGGGTGAATCTACCCTTGATGACCCCTTGTCCGAGCGATACAACAAATTGGGCTGCTCAATTTCTCCACTGGATAAGGAATCTGATGACTACAAGATGATCCTGAAGTACCTGGAGAAGACCTACGAACCTGTCAAAGTTGGAGATGTTGAATATGGGGTGTCTGTTGATAACATATTTGTTATCGAATCAAGTGCTTGCCAATCTCTGGATGAAATAAAGAAGTTACCGAACAAAGTGCTCTTATGGTGTGGAACACGGAGCTCAAATATGTTGAGGCACCTGCATAAGGGTTTCTTGCCAGCAATATGCTCTCTGCCTGTTCCAGGCTATATGTTTGGAAGGGCTATTGTGTGCTCTGATGCTGCTGCAGAAGCTGCAAGGTACGGGTTTACTGCAGTGGACAGACCGGAAGGGTTCTTGGTTTTAGCTGTAGCCTCTCAAGGAGACCAGATCACCAAGGTTAAGACCGCACCGGAGGATACCAAATCTTTAGAGGAGAAGAAAGTAGGAGTTAAAGGCTTGGGGAGGAAGAAAACTGATGAATCGGAGCACTTTGTTTGGCAAGACGATATCAAAGTTCCTTGTGGCCGCCTGGTACCTTCAGATGATAAAGAAAGCATTCTCGAGTACAACGAGTATGCTATTTATGATCCGGCACAGGTAAGCATCAGGTTTTTGGTAGCTGTGAAGTATGAAGAGAAGGATTCAGTGATGGAGCCGGAGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003909 GO:0003910 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006266 GO:0006271 GO:0006273 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016070 GO:0016874 GO:0016886 GO:0022616 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051103 GO:0051716 GO:0071704 GO:0090304 GO:0140097 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03410 ko04210 ko04212 ko04214 ko04217 map03410 map04210 map04212 map04214 map04217

Pfam Domains

Protein Families

BRCT BRCT_2 PADR1 PARP PARP_reg WGR

Protein Analysis

826

Amino Acids

93.0

Weight (kDa)

5.45

Isoelectric Point (pI)

43.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22470
fragaria_vesca	FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670 FvH4_3g24670
malus_domestica	MD03G1142500.v1.1
prunus_persica	Prupe.6G127600_v2.0.a1 Prupe.6G127600_v2.0.a1 Prupe.6G127600_v2.0.a1 Prupe.6G127600_v2.0.a1
pyrus_communis	pycom03g09710
rosa_chinensis	RchiOBHm_Chr5g0044231
rosa_laevigata	RLG00000034257
rosa_multiflora	Rmu_sc0000776.1_g000071
rosa_roxburghii	Rroxscaffold_1G00036790
rosa_rugosa	Rorug05G0212700
rosa_samantha	Rh5AG296800 Rh5BG304300 Rh5CG331300 Rh5DG313100
rosa_wichuraiana	Rw5G027490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2037
AasI	GACNNNNNNGTC	1 cut(s)	1208
Acc16I	TGCGCA	1 cut(s)	235
Acc36I	ACCTGC	2 cut(s)	1131, 2037
Acc65I	GGTACC	1 cut(s)	2344
AccB1I	GGYRCC	2 cut(s)	2025, 2344
AccB7I	CCANNNNNTGG	1 cut(s)	1954
AccII	CGCG	2 cut(s)	273, 1478
AciI	CCGC	9 cut(s)	239, 375, 470, 731, 994, 1169, 1295, 2217, 2338
AclWI	GGATC	7 cut(s)	433, 461, 474, 905, 918, 1840, 2393
AcoI	YGGCCR	2 cut(s)	292, 2335
AcsI	RAATTY	3 cut(s)	783, 1411, 1544
AcuI	CTGAAG	9 cut(s)	102, 186, 786, 971, 1319, 1523, 1642, 1871, 2334
AfaI	GTAC	8 cut(s)	451, 902, 1110, 1133, 1856, 2132, 2346, 2378
AfiI	CCNNNNNNNGG	6 cut(s)	327, 602, 1168, 1954, 2035, 2072
AgsI	TTSAA	7 cut(s)	258, 942, 1184, 1259, 1561, 1703, 1898
AhdI	GACNNNNNGTC	1 cut(s)	1774
AjnI	CCWGG	5 cut(s)	294, 553, 1857, 2071, 2340
AluBI	AGCT	8 cut(s)	229, 287, 1151, 1694, 2010, 2123, 2177, 2432
AluI	AGCT	8 cut(s)	229, 287, 1151, 1694, 2010, 2123, 2177, 2432
Alw21I	GWGCWC	4 cut(s)	1989, 2012, 2105, 2301
AlwI	GGATC	7 cut(s)	433, 461, 474, 905, 918, 1840, 2393
AlwNI	CAGNNNCTG	1 cut(s)	2123
Ama87I	CYCGRG	1 cut(s)	2372
AoxI	GGCC	5 cut(s)	156, 292, 625, 1580, 2335
ApeKI	GCWGC	9 cut(s)	236, 1376, 1688, 1691, 1694, 1800, 2111, 2114, 2123
ApoI	RAATTY	3 cut(s)	783, 1411, 1544
Asp700I	GAANNNNTTC	2 cut(s)	1707, 2367
Asp718I	GGTACC	1 cut(s)	2344
AspLEI	GCGC	4 cut(s)	236, 273, 1046, 1480
AspS9I	GGNCC	5 cut(s)	46, 356, 550, 625, 1580
AsuHPI	GGTGA	5 cut(s)	182, 1352, 1618, 1763, 2194
AvaI	CYCGRG	1 cut(s)	2372
AvaII	GGWCC	3 cut(s)	46, 356, 550
BalI	TGGCCA	1 cut(s)	294
BamHI	GGATCC	2 cut(s)	466, 910
BanI	GGYRCC	2 cut(s)	2025, 2344
BanII	GRGCYC	1 cut(s)	2012
BbsI	GAAGAC	1 cut(s)	1871
Bbv12I	GWGCWC	4 cut(s)	1989, 2012, 2105, 2301
BbvCI	CCTCAGC	1 cut(s)	1590
BbvI	GCAGC	9 cut(s)	248, 1363, 1675, 1681, 1703, 1787, 2098, 2101, 2110
BccI	CCATC	6 cut(s)	875, 1019, 1396, 1614, 1740, 2455
BceAI	ACGGC	3 cut(s)	193, 546, 612
BcgI	CGANNNNNNTGC	4 cut(s)	1922, 1956, 1966, 2000
BciT130I	CCWGG	5 cut(s)	296, 555, 1859, 2073, 2342
BciVI	GTATCC	1 cut(s)	2221
BfaI	CTAG	2 cut(s)	482, 1644
BfmI	CTRYAG	4 cut(s)	1689, 2115, 2142, 2178
BfuAI	ACCTGC	2 cut(s)	1131, 2037
BfuI	GTATCC	1 cut(s)	2221
Bme1390I	CCNGG	5 cut(s)	296, 555, 1859, 2073, 2342
Bme18I	GGWCC	3 cut(s)	46, 356, 550
BmeRI	GACNNNNNGTC	1 cut(s)	1774
BmeT110I	CYCGRG	1 cut(s)	2372
BmgT120I	GGNCC	5 cut(s)	46, 356, 550, 625, 1580
BmiI	GGNNCC	6 cut(s)	468, 552, 912, 2027, 2346, 2466
BmrFI	CCNGG	5 cut(s)	296, 555, 1859, 2073, 2342
BmrI	ACTGGG	2 cut(s)	581, 612
BmuI	ACTGGG	2 cut(s)	581, 612
BoxI	GACNNNNGTC	1 cut(s)	555
BpiI	GAAGAC	1 cut(s)	1871
BplI	GAGNNNNNCTC	2 cut(s)	112, 144
BpmI	CTGGAG	2 cut(s)	673, 1880
Bpu10I	CCTNAGC	1 cut(s)	1590
BpuEI	CTTGAG	3 cut(s)	950, 1415, 2172
BsaI	GGTCTC	2 cut(s)	66, 2187
BsaJI	CCNNGG	7 cut(s)	198, 473, 553, 896, 1262, 1722, 2205
BsaWI	WCCGGW	3 cut(s)	1244, 2155, 2221
BsaXI	ACNNNNNCTCC	4 cut(s)	669, 699, 1320, 1350
Bsc4I	CCNNNNNNNGG	6 cut(s)	327, 602, 1168, 1954, 2035, 2072
Bse1I	ACTGG	5 cut(s)	427, 587, 607, 656, 1821
Bse3DI	GCAATG	3 cut(s)	388, 777, 1384
BseBI	CCWGG	5 cut(s)	296, 555, 1859, 2073, 2342
BseDI	CCNNGG	7 cut(s)	198, 473, 553, 896, 1262, 1722, 2205
BseGI	GGATG	8 cut(s)	524, 582, 612, 722, 1327, 1503, 1579, 1963
BseLI	CCNNNNNNNGG	6 cut(s)	327, 602, 1168, 1954, 2035, 2072
BseMI	GCAATG	3 cut(s)	388, 777, 1384
BseMII	CTCAG	2 cut(s)	581, 1581
BseNI	ACTGG	5 cut(s)	427, 587, 607, 656, 1821
BseRI	GAGGAG	4 cut(s)	292, 903, 1544, 2258
BseXI	GCAGC	9 cut(s)	248, 1363, 1675, 1681, 1703, 1787, 2098, 2101, 2110
BseYI	CCCAGC	1 cut(s)	837
BsgI	GTGCAG	1 cut(s)	1680
Bsh1236I	CGCG	2 cut(s)	273, 1478
BshFI	GGCC	5 cut(s)	158, 294, 627, 1582, 2337
BshNI	GGYRCC	2 cut(s)	2025, 2344
BsiHKAI	GWGCWC	4 cut(s)	1989, 2012, 2105, 2301
BsiHKCI	CYCGRG	1 cut(s)	2372
BsiSI	CCGG	6 cut(s)	306, 1245, 2156, 2222, 2402, 2468
BslFI	GGGAC	2 cut(s)	357, 919
BslI	CCNNNNNNNGG	6 cut(s)	327, 602, 1168, 1954, 2035, 2072
BsmBI	CGTCTC	1 cut(s)	996
BsmFI	GGGAC	2 cut(s)	357, 919
BsmI	GAATGC	1 cut(s)	2367
BsnI	GGCC	5 cut(s)	158, 294, 627, 1582, 2337
Bso31I	GGTCTC	2 cut(s)	66, 2187
BsoBI	CYCGRG	1 cut(s)	2372
Bsp1286I	GDGCHC	4 cut(s)	1989, 2012, 2105, 2301
Bsp1407I	TGTACA	1 cut(s)	449
Bsp143I	GATC	8 cut(s)	425, 466, 868, 910, 1060, 1845, 2199, 2398
Bsp19I	CCATGG	3 cut(s)	896, 1262, 1722
BspACI	CCGC	9 cut(s)	239, 375, 470, 731, 994, 1169, 1295, 2217, 2338
BspANI	GGCC	5 cut(s)	158, 294, 627, 1582, 2337
BspCNI	CTCAG	2 cut(s)	580, 1582
BspFNI	CGCG	2 cut(s)	273, 1478
BspHI	TCATGA	2 cut(s)	130, 1416
BspLI	GGNNCC	6 cut(s)	468, 552, 912, 2027, 2346, 2466
BspMAI	CTGCAG	3 cut(s)	1693, 2119, 2146
BspMI	ACCTGC	2 cut(s)	1131, 2037
BspPI	GGATC	7 cut(s)	433, 461, 474, 905, 918, 1840, 2393
BspQI	GCTCTTC	1 cut(s)	1235
BspT107I	GGYRCC	2 cut(s)	2025, 2344
BspTNI	GGTCTC	2 cut(s)	66, 2187
BsrDI	GCAATG	3 cut(s)	388, 777, 1384
BsrGI	TGTACA	1 cut(s)	449
BsrI	ACTGG	5 cut(s)	427, 587, 607, 656, 1821
BssECI	CCNNGG	7 cut(s)	198, 473, 553, 896, 1262, 1722, 2205
BssMI	GATC	8 cut(s)	425, 466, 868, 910, 1060, 1845, 2199, 2398
BssT1I	CCWWGG	5 cut(s)	473, 896, 1262, 1722, 2205
Bst2UI	CCWGG	5 cut(s)	296, 555, 1859, 2073, 2342
Bst4CI	ACNGT	2 cut(s)	1108, 1116
Bst6I	CTCTTC	6 cut(s)	78, 915, 959, 1179, 1235, 2439
BstAPI	GCANNNNNTGC	3 cut(s)	728, 1685, 2123
BstAUI	TGTACA	1 cut(s)	449
BstC8I	GCNNGC	4 cut(s)	379, 1153, 1945, 2049
BstDEI	CTNAG	3 cut(s)	567, 632, 1590
BstDSI	CCRYGG	3 cut(s)	896, 1262, 1722
BstENI	CCTNNNNNAGG	2 cut(s)	2033, 2070
BstF5I	GGATG	8 cut(s)	524, 582, 612, 722, 1327, 1503, 1579, 1963
BstFNI	CGCG	2 cut(s)	273, 1478
BstHHI	GCGC	4 cut(s)	236, 273, 1046, 1480
BstKTI	GATC	8 cut(s)	428, 469, 871, 913, 1063, 1848, 2202, 2401
BstMBI	GATC	8 cut(s)	425, 466, 868, 910, 1060, 1845, 2199, 2398
BstMWI	GCNNNNNNNGC	8 cut(s)	134, 417, 728, 1348, 1685, 1694, 2120, 2123
BstNI	CCWGG	5 cut(s)	296, 555, 1859, 2073, 2342
BstNSI	RCATGY	1 cut(s)	381
BstPAI	GACNNNNGTC	1 cut(s)	555
BstSCI	CCNGG	5 cut(s)	294, 553, 1857, 2071, 2340
BstSFI	CTRYAG	4 cut(s)	1689, 2115, 2142, 2178
BstUI	CGCG	2 cut(s)	273, 1478
BstV1I	GCAGC	9 cut(s)	248, 1363, 1675, 1681, 1703, 1787, 2098, 2101, 2110
BstV2I	GAAGAC	1 cut(s)	1871
BstX2I	RGATCY	3 cut(s)	425, 466, 910
BstXI	CCANNNNNNTGG	2 cut(s)	701, 1739
BstYI	RGATCY	3 cut(s)	425, 466, 910
BsuI	GTATCC	1 cut(s)	2221
BsuRI	GGCC	5 cut(s)	158, 294, 627, 1582, 2337
BtgI	CCRYGG	3 cut(s)	896, 1262, 1722
BtgZI	GCGATG	1 cut(s)	1170
BtsCI	GGATG	8 cut(s)	524, 582, 612, 722, 1327, 1503, 1579, 1963
BtsI	GCAGTG	1 cut(s)	2151
BtsIMutI	CAGTG	5 cut(s)	420, 1121, 1814, 2151, 2463
BveI	ACCTGC	2 cut(s)	1131, 2037
Cac8I	GCNNGC	4 cut(s)	379, 1153, 1945, 2049
CaiI	CAGNNNCTG	1 cut(s)	2123
CciI	TCATGA	2 cut(s)	130, 1416
CfoI	GCGC	4 cut(s)	236, 273, 1046, 1480
Cfr13I	GGNCC	5 cut(s)	46, 356, 550, 625, 1580
CseI	GACGC	1 cut(s)	1484
Csp6I	GTAC	8 cut(s)	450, 901, 1109, 1132, 1855, 2131, 2345, 2377
CviQI	GTAC	8 cut(s)	450, 901, 1109, 1132, 1855, 2131, 2345, 2377
DdeI	CTNAG	3 cut(s)	567, 632, 1590
DpnI	GATC	8 cut(s)	427, 468, 870, 912, 1062, 1847, 2201, 2400
DpnII	GATC	8 cut(s)	425, 466, 868, 910, 1060, 1845, 2199, 2398
DrdI	GACNNNNNNGTC	1 cut(s)	1208
DriI	GACNNNNNGTC	1 cut(s)	1774
DseDI	GACNNNNNNGTC	1 cut(s)	1208
EaeI	YGGCCR	2 cut(s)	292, 2335
Eam1104I	CTCTTC	6 cut(s)	78, 915, 959, 1179, 1235, 2439
Eam1105I	GACNNNNNGTC	1 cut(s)	1774
EarI	CTCTTC	6 cut(s)	78, 915, 959, 1179, 1235, 2439
EciI	GGCGGA	1 cut(s)	459
Ecl136II	GAGCTC	1 cut(s)	2010
Eco130I	CCWWGG	5 cut(s)	473, 896, 1262, 1722, 2205
Eco24I	GRGCYC	1 cut(s)	2012
Eco31I	GGTCTC	2 cut(s)	66, 2187
Eco32I	GATATC	1 cut(s)	2320
Eco47I	GGWCC	3 cut(s)	46, 356, 550
Eco53kI	GAGCTC	1 cut(s)	2010
Eco57I	CTGAAG	9 cut(s)	102, 186, 786, 971, 1319, 1523, 1642, 1871, 2334
Eco88I	CYCGRG	1 cut(s)	2372
EcoICRI	GAGCTC	1 cut(s)	2010
EcoNI	CCTNNNNNAGG	2 cut(s)	2033, 2070
EcoO109I	RGGNCCY	1 cut(s)	550
EcoRI	GAATTC	1 cut(s)	783
EcoRII	CCWGG	5 cut(s)	294, 553, 1857, 2071, 2340
EcoRV	GATATC	1 cut(s)	2320
EcoT14I	CCWWGG	5 cut(s)	473, 896, 1262, 1722, 2205
EcoT38I	GRGCYC	1 cut(s)	2012
ErhI	CCWWGG	5 cut(s)	473, 896, 1262, 1722, 2205
Esp3I	CGTCTC	1 cut(s)	996
FalI	AAGNNNNNCTT	4 cut(s)	912, 944, 2027, 2059
FaqI	GGGAC	2 cut(s)	357, 919
FauI	CCCGC	2 cut(s)	382, 987
FokI	GGATG	8 cut(s)	511, 569, 619, 709, 1334, 1510, 1586, 1970
FriOI	GRGCYC	1 cut(s)	2012
FspBI	CTAG	2 cut(s)	482, 1644
FspI	TGCGCA	1 cut(s)	235
GlaI	GCGC	4 cut(s)	235, 272, 1045, 1479
GsaI	CCCAGC	1 cut(s)	841
GsuI	CTGGAG	2 cut(s)	673, 1880
HaeIII	GGCC	5 cut(s)	158, 294, 627, 1582, 2337
HapII	CCGG	6 cut(s)	306, 1245, 2156, 2222, 2402, 2468
HgaI	GACGC	1 cut(s)	1484
HhaI	GCGC	4 cut(s)	236, 273, 1046, 1480
Hin6I	GCGC	4 cut(s)	234, 271, 1044, 1478
HinP1I	GCGC	4 cut(s)	234, 271, 1044, 1478
HincII	GTYRAC	1 cut(s)	1616
HindII	GTYRAC	1 cut(s)	1616
HinfI	GANTC	8 cut(s)	299, 314, 932, 1754, 1826, 1934, 2291, 2453
HpaII	CCGG	6 cut(s)	306, 1245, 2156, 2222, 2402, 2468
HphI	GGTGA	5 cut(s)	182, 1352, 1618, 1763, 2194
Hpy166II	GTNNAC	9 cut(s)	29, 758, 976, 1201, 1513, 1616, 1626, 2139, 2149
Hpy8I	GTNNAC	9 cut(s)	29, 758, 976, 1201, 1513, 1616, 1626, 2139, 2149
Hpy99I	CGWCG	1 cut(s)	103
HpyAV	CCTTC	9 cut(s)	148, 161, 1414, 1564, 1579, 2082, 2153, 2358, 2443
HpyCH4III	ACNGT	2 cut(s)	1108, 1116
HpyF10VI	GCNNNNNNNGC	8 cut(s)	134, 417, 728, 1348, 1685, 1694, 2120, 2123
HpyF3I	CTNAG	3 cut(s)	567, 632, 1590
HspAI	GCGC	4 cut(s)	234, 271, 1044, 1478
KpnI	GGTACC	1 cut(s)	2348
Kzo9I	GATC	8 cut(s)	425, 466, 868, 910, 1060, 1845, 2199, 2398
LguI	GCTCTTC	1 cut(s)	1235
LmnI	GCTCC	6 cut(s)	733, 880, 997, 2007, 2296, 2464
Lsp1109I	GCAGC	9 cut(s)	248, 1363, 1675, 1681, 1703, 1787, 2098, 2101, 2110
MaeI	CTAG	2 cut(s)	482, 1644
MaeIII	GTNAC	5 cut(s)	11, 94, 170, 706, 1971
MalI	GATC	8 cut(s)	427, 468, 870, 912, 1062, 1847, 2201, 2400
MboI	GATC	8 cut(s)	425, 466, 868, 910, 1060, 1845, 2199, 2398
MfeI	CAATTG	1 cut(s)	1364
MflI	RGATCY	3 cut(s)	425, 466, 910
MhlI	GDGCHC	4 cut(s)	1989, 2012, 2105, 2301
MlsI	TGGCCA	1 cut(s)	294
MluCI	AATT	8 cut(s)	206, 783, 989, 1364, 1411, 1544, 1793, 1806
MluNI	TGGCCA	1 cut(s)	294
MlyI	GAGTC	2 cut(s)	293, 941
MmeI	TCCRAC	1 cut(s)	1867
Mox20I	TGGCCA	1 cut(s)	294
MroXI	GAANNNNTTC	2 cut(s)	1707, 2367
MscI	TGGCCA	1 cut(s)	294
MseI	TTAA	5 cut(s)	578, 591, 1457, 2211, 2262
MslI	CAYNNNNRTG	4 cut(s)	69, 75, 1631, 1721
Msp20I	TGGCCA	1 cut(s)	294
MspA1I	CMGCKG	3 cut(s)	239, 1297, 1694
MspI	CCGG	6 cut(s)	306, 1245, 2156, 2222, 2402, 2468
MspR9I	CCNGG	5 cut(s)	296, 555, 1859, 2073, 2342
MunI	CAATTG	1 cut(s)	1364
Mva1269I	GAATGC	1 cut(s)	2367
MvaI	CCWGG	5 cut(s)	296, 555, 1859, 2073, 2342
MvnI	CGCG	2 cut(s)	273, 1478
MwoI	GCNNNNNNNGC	8 cut(s)	134, 417, 728, 1348, 1685, 1694, 2120, 2123
NcoI	CCATGG	3 cut(s)	896, 1262, 1722
NdeII	GATC	8 cut(s)	425, 466, 868, 910, 1060, 1845, 2199, 2398
NlaIV	GGNNCC	6 cut(s)	468, 552, 912, 2027, 2346, 2466
NmeAIII	GCCGAG	2 cut(s)	142, 241
NmuCI	GTSAC	2 cut(s)	94, 170
NsbI	TGCGCA	1 cut(s)	235
NspI	RCATGY	1 cut(s)	381
PaeI	GCATGC	1 cut(s)	381
PaeR7I	CTCGAG	1 cut(s)	2372
PagI	TCATGA	2 cut(s)	130, 1416
PaqCI	CACCTGC	1 cut(s)	2037
PciSI	GCTCTTC	1 cut(s)	1235
PcsI	WCGNNNNNNNCGW	1 cut(s)	2379
PctI	GAATGC	1 cut(s)	2367
PdmI	GAANNNNTTC	2 cut(s)	1707, 2367
PfeI	GAWTC	6 cut(s)	314, 1754, 1826, 1934, 2291, 2453
PflFI	GACNNNGTC	1 cut(s)	58
PflMI	CCANNNNNTGG	1 cut(s)	1954
PleI	GAGTC	2 cut(s)	293, 940
PpsI	GAGTC	2 cut(s)	293, 940
PpuMI	RGGWCCY	1 cut(s)	550
PshAI	GACNNNNGTC	1 cut(s)	555
Psp124BI	GAGCTC	1 cut(s)	2012
Psp5II	RGGWCCY	1 cut(s)	550
Psp6I	CCWGG	5 cut(s)	294, 553, 1857, 2071, 2340
PspFI	CCCAGC	1 cut(s)	837
PspGI	CCWGG	5 cut(s)	294, 553, 1857, 2071, 2340
PspN4I	GGNNCC	6 cut(s)	468, 552, 912, 2027, 2346, 2466
PspPI	GGNCC	5 cut(s)	46, 356, 550, 625, 1580
PspPPI	RGGWCCY	1 cut(s)	550
PstI	CTGCAG	3 cut(s)	1693, 2119, 2146
PstNI	CAGNNNCTG	1 cut(s)	2123
PsuI	RGATCY	3 cut(s)	425, 466, 910
PsyI	GACNNNGTC	1 cut(s)	58
PvuII	CAGCTG	1 cut(s)	1694
RsaI	GTAC	8 cut(s)	451, 902, 1110, 1133, 1856, 2132, 2346, 2378
RsaNI	GTAC	8 cut(s)	450, 901, 1109, 1132, 1855, 2131, 2345, 2377
RseI	CAYNNNNRTG	4 cut(s)	69, 75, 1631, 1721
SacI	GAGCTC	1 cut(s)	2012
SapI	GCTCTTC	1 cut(s)	1235
SaqAI	TTAA	5 cut(s)	578, 591, 1457, 2211, 2262
Sau3AI	GATC	8 cut(s)	425, 466, 868, 910, 1060, 1845, 2199, 2398
Sau96I	GGNCC	5 cut(s)	46, 356, 550, 625, 1580
SchI	GAGTC	2 cut(s)	293, 941
ScrFI	CCNGG	5 cut(s)	296, 555, 1859, 2073, 2342
SduI	GDGCHC	4 cut(s)	1989, 2012, 2105, 2301
SfcI	CTRYAG	4 cut(s)	1689, 2115, 2142, 2178
Sfr274I	CTCGAG	1 cut(s)	2372
SinI	GGWCC	3 cut(s)	46, 356, 550
SlaI	CTCGAG	1 cut(s)	2372
SmiMI	CAYNNNNRTG	4 cut(s)	69, 75, 1631, 1721
SmlI	CTYRAG	4 cut(s)	929, 1394, 2187, 2372
SmoI	CTYRAG	4 cut(s)	929, 1394, 2187, 2372
SphI	GCATGC	1 cut(s)	381
Sse9I	AATT	8 cut(s)	206, 783, 989, 1364, 1411, 1544, 1793, 1806
SsiI	CCGC	9 cut(s)	239, 375, 470, 731, 994, 1169, 1295, 2217, 2338
SspMI	CTAG	2 cut(s)	482, 1644
SstI	GAGCTC	1 cut(s)	2012
StyD4I	CCNGG	5 cut(s)	294, 553, 1857, 2071, 2340
StyI	CCWWGG	5 cut(s)	473, 896, 1262, 1722, 2205
TaaI	ACNGT	2 cut(s)	1108, 1116
TaqI	TCGA	6 cut(s)	822, 846, 1233, 1711, 1932, 2373
TasI	AATT	8 cut(s)	206, 783, 989, 1364, 1411, 1544, 1793, 1806
TatI	WGTACW	3 cut(s)	449, 1131, 2376
TauI	GCSGC	2 cut(s)	1297, 2340
TfiI	GAWTC	6 cut(s)	314, 1754, 1826, 1934, 2291, 2453
Tru1I	TTAA	5 cut(s)	578, 591, 1457, 2211, 2262
Tru9I	TTAA	5 cut(s)	578, 591, 1457, 2211, 2262
TscAI	CASTG	5 cut(s)	427, 1121, 1821, 2151, 2463
TseFI	GTSAC	2 cut(s)	94, 170
TseI	GCWGC	9 cut(s)	236, 1376, 1688, 1691, 1694, 1800, 2111, 2114, 2123
Tsp45I	GTSAC	2 cut(s)	94, 170
TspDTI	ATGAA	6 cut(s)	1405, 1433, 1583, 1974, 2304, 2457
TspGWI	ACGGA	5 cut(s)	343, 690, 1341, 1495, 2020
TspRI	CASTG	5 cut(s)	427, 1121, 1821, 2151, 2463
Tth111I	GACNNNGTC	1 cut(s)	58
Van91I	CCANNNNNTGG	1 cut(s)	1954
VpaK11BI	GGWCC	3 cut(s)	46, 356, 550
XagI	CCTNNNNNAGG	2 cut(s)	2033, 2070
XapI	RAATTY	3 cut(s)	783, 1411, 1544
XceI	RCATGY	1 cut(s)	381
XhoI	CTCGAG	1 cut(s)	2372
XmnI	GAANNNNTTC	2 cut(s)	1707, 2367
XspI	CTAG	2 cut(s)	482, 1644

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.