Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0006361

Physical Location & Seq

Genomic Coordinates Forward (+)

19490046 .. 19498342

Gene Structure 8297 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g26430.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2892 bp

ATGGGCGTTTTGCTCAAAGAAGCGCTTAAGAGGCTGTGCACTGCCAATCACTGGGCTTATGCCGTCTTCTGGAAGATCGGCTGCCAAAACTCCAATTTATTAATTTGGGAAGAATCTCATTGTGAACCATCACTATCTTCTCGACGTACACACATTGATGGAACTGAAAGTGGTGAATCACCATTTGGAGAGTGGGAAGGATGCTGGGCTTCCTCTGATATGTGTTCCTCTTCTCATGGCATTCAACCAGAGGAATTTGTCTCTGCACTTCTTAACAAAATGTTGATGAATAAACCCTTTACTATAATGGGCGAAGGAATAGTTGGACGAGCTGCATTTACTGGAAATCATCAATGGATTCTTTCAAGCAATTACTCTAAATATGCCCATCCACCAGAGGTAGTAAATGAGATGCACCACCAGTTTTCAGCTGGAATGCAGACAGTTGCAGTTATTCCTGTTCTCCCTCACGGTGTTGTTCAGCTTGGTTCTAGTTTGACTATTATGGAGAATATAGGATTCATTAATGACGTCAGGAGTTTGATCCGGCAACTTGGATGTGTTCCTGGTGCTCTTTTATCTGAAAACTATGAGACAAAAAATTCAATTGGTAAAGCTGGGGTACCCTATAATATCGGAACGCTGACAACCGGCCATCCAGGTGGACATGCAACAAGTTCTACTCACATGTCTAATAGCTACACTCATCAAAACCACTCATCTCAGGCTCCCAGGCTTGTTGGTCAACCTTCTCATTCCCTTTTTGAAGAAATTCTGAATATTTATCAAGCTCCCGTTTCAACATTTCAAACTCCTAACCTTGCCCAAAATCTGCCTAAAATTCCTGATGACCTTCAACAAACATTGAATAAACCAAAGTTTCCTCTTGGATGCCAACTAAGGGATGGAGTTGGGGTAGCTGAAGTGATCAGCTCTAATTCTGATGCATGGTTGAACCACCTTGCTCCTAATTCAAGGTGTGGACTCAAATACCCATGTGGTTCTGTTCAATCAGCTGCAAGTCAGGGAAGCTTAGAGTTGATGGAACATCAGATCTTGTCTGCTGGTAGCATGAGGCCTAATTTTAATAGCAAAATTACTGCATCAAATGGTTTCAAGCCTAGAACAAATGGAACTCTAACCATTGATCAGAGAAACAGTTTGATAACCACTCCGTTGCTCGGAGGAAGTCAAACACATGGTGGATCAAGTACCCATTCGAGGCCTACTTTAGTTACAAGCTCTCATTCAGAGCCACATGGGCCAGCTGACATGAATCTCTCTGGAACATATCATTCTGGGGTTAATTTTCGAAAGACTCATTCATTCCAAATAGACGGGGTTTCTTTATCTAGTTTGGCAGATCAGTCAGCTTCTCAGGACATACATCCAAAAGGCTCTGACCAGAGACAGTTTTCCACGGAAGTGAAGCTTACTCAGAGTGATTTGCCTCCAGTGGAGCAAATGATAGAAAATAAATTGTTTCAAGCCCTTGACATCCCATTGACTCATCCATGTGAACATATGCCTTTAAGTGATCACATATCTCAGAGTATTCATGATGACTTTGATAATAAAAGTTGCACACGGGGATCTGCAAATGCTACAAATGATGATGTGTGTACTCAAATTTCATCAGGGGATGACTTATTTGATGTTTTGGGTGTGGATTTCAAAAATAAGTTGCTTAATAACAACTGGACTAGTTTGCTGGCTGATGAACCAGGTTCTAACAAAAGAGATCTTGCTGAGAATACTGTGGTGTTTACACACGTGAAGGATTTGGTTTCGGATTATTATTCCGTAAGTGAAAGGATATCAAACAGTAGTAACTTCTCTGTGGCAGATGCTGACCATCTTTTAGATGCTGTGGTCTCGAAGGGTCACTCTACTATCAAGCAGAGCTCTGATGATAATGTGTCTTGTAAAACAACATTGACAAAAATCAGTACCTCTTCCGTACCTAGGGGTTCTCCCACTCATGGACAGGTTAGTGTGTCTAATCATGTGCTTGGGGAGACATCAGACCTTCCTAATGATCTTGGAAAAGCAGGCTTGGTAGAAATTAGTTCTTTCCTATCTGGGAGTTGCCGCGCTGATGCAGGAAACTGTTCCCAGACTACCTCCGTGTATGGATCTCAAGTTAGTTCTTGGGTTGAACAGGGCCATAATTCAAAGCATGAGAGTAGTGTTTCAACTGCATATTCTAAGAAGCCTGATCTATTGGGGAAATCAAATCGCAAAAGGCTGAAACCTGGTGAGAATCCTAGACCAAGACCAAAAGATCGCCAGATGATCCAAGATCGTGTGAAAGAGTTACGAGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTGCTTGAACGGACCATTAAGCATATGCTTTTCTTGCAAAGTGTCACCAAGCATGCTGATAAGCTAAAACAAACAGGAAAAGGCAAGATTATTGGCAAAGAAGCTGGACTGCATCTTAAAGAAAACTTTGATGGAAGGGCAACATGGGCTTTTGATGTTGGGTCACAATCTATGGTCTGCCCTATCATAGTTGAGGATCTGGATGCACCTCGCCAGATGCTAGTGGAGATGCTTTGTGAAGAACAGGGTTTCTTTTTAGAAATTGCTGATTTGATTAGAGGTTTGGGTTTGACCATCTTGAAGGGGATGATGGAAACTCGGAATGATAAGATATGGGCACGCTTTGCTGTAGAGGCAAATAGGGACGTTACAAGGATGGAGATATTTATGTCACTGGTTCACCTTTTGGAACAAACTGTAAAAGGCACCGTGCCACCAGTCAATGCCATCAAGAGCAACAGTATGGTCCACCATTCTTTTGCCCAAACAACCCCAATACCTGCAACTGGTAGGCGTAGTGGTTTTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0010015 GO:0010073 GO:0010074 GO:0010078 GO:0010468 GO:0010479 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0098727 GO:0099402 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

964

Amino Acids

105.07

Weight (kDa)

6.44

Isoelectric Point (pI)

38.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	71 - 115	7.1e-11	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH_LHW	PF23176	691 - 750	1.3e-34	Transcription factor LHW bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27230 AT2G27230
fragaria_vesca	FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430
malus_domestica	MD03G1116900.v1.1 MD03G1155700.v1.1 MD11G1173100.v1.1
prunus_persica	Prupe.6G144300_v2.0.a1
pyrus_communis	pycom03g10980 pycom11g14740
rosa_chinensis	RchiOBHm_Chr5g0048491
rosa_laevigata	RLG00000034527
rosa_multiflora	Rmu_sc0001173.1_g000023
rosa_roxburghii	Rroxscaffold_1G00033350
rosa_rugosa	Rorug05G0238400 Rorug05G0238500
rosa_samantha	Rh5AG318800 Rh5BG328800 Rh5CG354800 Rh5DG339800
rosa_wichuraiana	Rw5G029780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	534
Acc36I	ACCTGC	1 cut(s)	2869
Acc65I	GGTACC	1 cut(s)	622
AccB1I	GGYRCC	2 cut(s)	622, 2786
AccB7I	CCANNNNNTGG	1 cut(s)	51
AccII	CGCG	1 cut(s)	2094
AciI	CCGC	1 cut(s)	2092
AclWI	GGATC	6 cut(s)	538, 1213, 1600, 2143, 2290, 2565
AcoI	YGGCCR	1 cut(s)	652
AcsI	RAATTY	5 cut(s)	254, 601, 771, 840, 1629
AcuI	CTGAAG	1 cut(s)	942
AcvI	CACGTG	1 cut(s)	1774
AcyI	GRCGYC	1 cut(s)	531
AdeI	CACNNNGTG	1 cut(s)	1202
AfaI	GTAC	6 cut(s)	148, 624, 1213, 1624, 1951, 1962
AfeI	AGCGCT	1 cut(s)	24
AfiI	CCNNNNNNNGG	8 cut(s)	51, 69, 901, 1181, 1221, 1965, 1982, 2867
AflII	CTTAAG	1 cut(s)	26
AflIII	ACRYGT	2 cut(s)	687, 1771
AhlI	ACTAGT	1 cut(s)	1703
AjnI	CCWGG	5 cut(s)	565, 658, 731, 1723, 2254
AjuI	GAANNNNNNNTTGG	4 cut(s)	168, 200, 306, 338
AleI	CACNNNNGTG	1 cut(s)	1424
Alw21I	GWGCWC	3 cut(s)	41, 574, 1907
Alw26I	GTCTC	5 cut(s)	265, 587, 1402, 1879, 2012
Alw44I	GTGCAC	1 cut(s)	37
AlwI	GGATC	6 cut(s)	538, 1213, 1600, 2143, 2290, 2565
AlwNI	CAGNNNCTG	1 cut(s)	1850
Aor51HI	AGCGCT	1 cut(s)	24
AoxI	GGCC	5 cut(s)	652, 1076, 1223, 1262, 2164
ApaLI	GTGCAC	1 cut(s)	37
ApeKI	GCWGC	3 cut(s)	81, 332, 1016
ApoI	RAATTY	5 cut(s)	254, 601, 771, 840, 1629
AseI	ATTAAT	2 cut(s)	101, 525
Asp700I	GAANNNNTTC	2 cut(s)	771, 2110
Asp718I	GGTACC	1 cut(s)	622
AspA2I	CCTAGG	1 cut(s)	1964
AspLEI	GCGC	2 cut(s)	25, 2096
AspS9I	GGNCC	4 cut(s)	1262, 2164, 2373, 2827
AsuHPI	GGTGA	5 cut(s)	171, 185, 2270, 2398, 2753
AsuII	TTCGAA	1 cut(s)	1312
AvaII	GGWCC	2 cut(s)	2373, 2827
AvrII	CCTAGG	1 cut(s)	1964
BaeGI	GKGCMC	2 cut(s)	41, 2701
BanI	GGYRCC	2 cut(s)	622, 2786
BanII	GRGCYC	1 cut(s)	1907
BbrPI	CACGTG	1 cut(s)	1774
BbsI	GAAGAC	1 cut(s)	58
Bbv12I	GWGCWC	3 cut(s)	41, 574, 1907
BbvI	GCAGC	3 cut(s)	68, 319, 1003
BceAI	ACGGC	1 cut(s)	47
BciT130I	CCWGG	5 cut(s)	567, 660, 733, 1725, 2256
BclI	TGATCA	3 cut(s)	927, 1147, 1537
BcoDI	GTCTC	5 cut(s)	265, 587, 1402, 1879, 2012
BcuI	ACTAGT	1 cut(s)	1703
BfaI	CTAG	7 cut(s)	492, 1122, 1353, 1704, 1965, 2268, 2582
BfmI	CTRYAG	1 cut(s)	2709
BfoI	RGCGCY	1 cut(s)	26
BfrI	CTTAAG	1 cut(s)	26
BfuAI	ACCTGC	1 cut(s)	2869
BglI	GCCNNNNNGGC	1 cut(s)	1261
BglII	AGATCT	2 cut(s)	1053, 1741
BisI	GCNGC	4 cut(s)	82, 333, 1017, 2092
BlnI	CCTAGG	1 cut(s)	1964
BlsI	GCNGC	4 cut(s)	83, 334, 1018, 2093
Bme1390I	CCNGG	5 cut(s)	567, 660, 733, 1725, 2256
Bme18I	GGWCC	2 cut(s)	2373, 2827
BmgT120I	GGNCC	4 cut(s)	1262, 2164, 2373, 2827
BmiI	GGNNCC	3 cut(s)	624, 729, 2788
BmrFI	CCNGG	5 cut(s)	567, 660, 733, 1725, 2256
BmrI	ACTGGG	1 cut(s)	61
BmuI	ACTGGG	1 cut(s)	61
BpiI	GAAGAC	1 cut(s)	58
BpmI	CTGGAG	1 cut(s)	1437
Bpu14I	TTCGAA	1 cut(s)	1312
BpuEI	CTTGAG	1 cut(s)	2124
BsaAI	YACGTR	1 cut(s)	1774
BsaHI	GRCGYC	1 cut(s)	531
BsaI	GGTCTC	1 cut(s)	1879
BsaJI	CCNNGG	3 cut(s)	731, 1419, 1964
BsaXI	ACNNNNNCTCC	2 cut(s)	900, 930
Bsc4I	CCNNNNNNNGG	8 cut(s)	51, 69, 901, 1181, 1221, 1965, 1982, 2867
Bse118I	RCCGGY	1 cut(s)	650
Bse1I	ACTGG	8 cut(s)	56, 346, 421, 1454, 1703, 2760, 2798, 2872
BseBI	CCWGG	5 cut(s)	567, 660, 733, 1725, 2256
BseDI	CCNNGG	3 cut(s)	731, 1419, 1964
BseLI	CCNNNNNNNGG	8 cut(s)	51, 69, 901, 1181, 1221, 1965, 1982, 2867
BseMII	CTCAG	5 cut(s)	737, 1391, 1451, 1562, 1740
BseNI	ACTGG	8 cut(s)	56, 346, 421, 1454, 1703, 2760, 2798, 2872
BseSI	GKGCMC	2 cut(s)	41, 2701
BseXI	GCAGC	3 cut(s)	68, 319, 1003
BseYI	CCCAGC	2 cut(s)	204, 617
BsgI	GTGCAG	1 cut(s)	249
Bsh1236I	CGCG	1 cut(s)	2094
BshFI	GGCC	5 cut(s)	654, 1078, 1225, 1264, 2166
BshNI	GGYRCC	2 cut(s)	622, 2786
BsiHKAI	GWGCWC	3 cut(s)	41, 574, 1907
BsiSI	CCGG	2 cut(s)	547, 651
BslFI	GGGAC	1 cut(s)	2738
BslI	CCNNNNNNNGG	8 cut(s)	51, 69, 901, 1181, 1221, 1965, 1982, 2867
BsmAI	GTCTC	5 cut(s)	265, 587, 1402, 1879, 2012
BsmFI	GGGAC	1 cut(s)	2738
BsmI	GAATGC	2 cut(s)	240, 441
BsnI	GGCC	5 cut(s)	654, 1078, 1225, 1264, 2166
Bso31I	GGTCTC	1 cut(s)	1879
Bsp119I	TTCGAA	1 cut(s)	1312
Bsp1286I	GDGCHC	4 cut(s)	41, 574, 1907, 2701
BspACI	CCGC	1 cut(s)	2092
BspANI	GGCC	5 cut(s)	654, 1078, 1225, 1264, 2166
BspCNI	CTCAG	5 cut(s)	736, 1390, 1450, 1561, 1741
BspFNI	CGCG	1 cut(s)	2094
BspHI	TCATGA	1 cut(s)	1558
BspLI	GGNNCC	3 cut(s)	624, 729, 2788
BspMI	ACCTGC	1 cut(s)	2869
BspPI	GGATC	6 cut(s)	538, 1213, 1600, 2143, 2290, 2565
BspT104I	TTCGAA	1 cut(s)	1312
BspT107I	GGYRCC	2 cut(s)	622, 2786
BspTI	CTTAAG	1 cut(s)	26
BspTNI	GGTCTC	1 cut(s)	1879
BsrFI	RCCGGY	1 cut(s)	650
BsrI	ACTGG	8 cut(s)	56, 346, 421, 1454, 1703, 2760, 2798, 2872
BssAI	RCCGGY	1 cut(s)	650
BssECI	CCNNGG	3 cut(s)	731, 1419, 1964
BssNI	GRCGYC	1 cut(s)	531
BssT1I	CCWWGG	1 cut(s)	1964
Bst2UI	CCWGG	5 cut(s)	567, 660, 733, 1725, 2256
Bst6I	CTCTTC	2 cut(s)	235, 1960
BstACI	GRCGYC	1 cut(s)	531
BstAFI	CTTAAG	1 cut(s)	26
BstAPI	GCANNNNNTGC	1 cut(s)	2705
BstBAI	YACGTR	1 cut(s)	1774
BstBI	TTCGAA	1 cut(s)	1312
BstC8I	GCNNGC	5 cut(s)	1266, 1713, 2053, 2415, 2701
BstDEI	CTNAG	8 cut(s)	723, 899, 1033, 1377, 1437, 1548, 1749, 2208
BstDSI	CCRYGG	1 cut(s)	1419
BstFNI	CGCG	1 cut(s)	2094
BstH2I	RGCGCY	1 cut(s)	26
BstHHI	GCGC	2 cut(s)	25, 2096
BstMAI	GTCTC	5 cut(s)	265, 587, 1402, 1879, 2012
BstMWI	GCNNNNNNNGC	6 cut(s)	31, 1261, 2395, 2507, 2705, 2714
BstNI	CCWGG	5 cut(s)	567, 660, 733, 1725, 2256
BstNSI	RCATGY	3 cut(s)	671, 691, 2417
BstSCI	CCNGG	5 cut(s)	565, 658, 731, 1723, 2254
BstSFI	CTRYAG	1 cut(s)	2709
BstSLI	GKGCMC	2 cut(s)	41, 2701
BstUI	CGCG	1 cut(s)	2094
BstV1I	GCAGC	3 cut(s)	68, 319, 1003
BstV2I	GAAGAC	1 cut(s)	58
BstX2I	RGATCY	5 cut(s)	1053, 1592, 1741, 2135, 2557
BstXI	CCANNNNNNTGG	1 cut(s)	662
BstYI	RGATCY	5 cut(s)	1053, 1592, 1741, 2135, 2557
BsuRI	GGCC	5 cut(s)	654, 1078, 1225, 1264, 2166
BtgI	CCRYGG	1 cut(s)	1419
BtsI	GCAGTG	2 cut(s)	39, 2360
BtsIMutI	CAGTG	5 cut(s)	39, 49, 1461, 2360, 2753
BveI	ACCTGC	1 cut(s)	2869
Cac8I	GCNNGC	5 cut(s)	1266, 1713, 2053, 2415, 2701
CaiI	CAGNNNCTG	1 cut(s)	1850
CciI	TCATGA	1 cut(s)	1558
CfoI	GCGC	2 cut(s)	25, 2096
Cfr10I	RCCGGY	1 cut(s)	650
Cfr13I	GGNCC	4 cut(s)	1262, 2164, 2373, 2827
CsiI	ACCWGGT	2 cut(s)	1723, 2254
Csp6I	GTAC	6 cut(s)	147, 623, 1212, 1623, 1950, 1961
CviQI	GTAC	6 cut(s)	147, 623, 1212, 1623, 1950, 1961
DdeI	CTNAG	8 cut(s)	723, 899, 1033, 1377, 1437, 1548, 1749, 2208
DraIII	CACNNNGTG	1 cut(s)	1202
EaeI	YGGCCR	1 cut(s)	652
Eam1104I	CTCTTC	2 cut(s)	235, 1960
EarI	CTCTTC	2 cut(s)	235, 1960
Ecl136II	GAGCTC	1 cut(s)	1905
Eco130I	CCWWGG	1 cut(s)	1964
Eco147I	AGGCCT	2 cut(s)	1078, 1225
Eco24I	GRGCYC	1 cut(s)	1907
Eco31I	GGTCTC	1 cut(s)	1879
Eco32I	GATATC	1 cut(s)	1818
Eco47I	GGWCC	2 cut(s)	2373, 2827
Eco47III	AGCGCT	1 cut(s)	24
Eco53kI	GAGCTC	1 cut(s)	1905
Eco57I	CTGAAG	1 cut(s)	942
Eco72I	CACGTG	1 cut(s)	1774
EcoICRI	GAGCTC	1 cut(s)	1905
EcoRII	CCWGG	5 cut(s)	565, 658, 731, 1723, 2254
EcoRV	GATATC	1 cut(s)	1818
EcoT14I	CCWWGG	1 cut(s)	1964
EcoT22I	ATGCAT	1 cut(s)	949
EcoT38I	GRGCYC	1 cut(s)	1907
ErhI	CCWWGG	1 cut(s)	1964
FalI	AAGNNNNNCTT	4 cut(s)	9, 41, 1416, 1448
FaqI	GGGAC	1 cut(s)	2738
FauNDI	CATATG	2 cut(s)	1524, 2385
FbaI	TGATCA	3 cut(s)	927, 1147, 1537
Fnu4HI	GCNGC	4 cut(s)	82, 333, 1017, 2092
FriOI	GRGCYC	1 cut(s)	1907
Fsp4HI	GCNGC	4 cut(s)	82, 333, 1017, 2092
FspBI	CTAG	7 cut(s)	492, 1122, 1353, 1704, 1965, 2268, 2582
GlaI	GCGC	2 cut(s)	24, 2095
GluI	GCNGC	4 cut(s)	82, 333, 1017, 2092
GsaI	CCCAGC	2 cut(s)	208, 621
GsuI	CTGGAG	1 cut(s)	1437
HaeII	RGCGCY	1 cut(s)	26
HaeIII	GGCC	5 cut(s)	654, 1078, 1225, 1264, 2166
HapII	CCGG	2 cut(s)	547, 651
HhaI	GCGC	2 cut(s)	25, 2096
Hin1I	GRCGYC	1 cut(s)	531
Hin6I	GCGC	2 cut(s)	23, 2094
HinP1I	GCGC	2 cut(s)	23, 2094
HincII	GTYRAC	1 cut(s)	746
HindII	GTYRAC	1 cut(s)	746
HindIII	AAGCTT	2 cut(s)	1030, 1430
HinfI	GANTC	9 cut(s)	113, 176, 358, 519, 984, 1276, 1318, 1507, 2263
HpaII	CCGG	2 cut(s)	547, 651
HphI	GGTGA	5 cut(s)	171, 185, 2270, 2398, 2753
Hpy99I	CGWCG	1 cut(s)	147
HpyAV	CCTTC	9 cut(s)	191, 308, 759, 863, 1771, 1873, 2039, 2490, 2656
HpyCH4IV	ACGT	4 cut(s)	145, 531, 1773, 2727
HpyF10VI	GCNNNNNNNGC	6 cut(s)	31, 1261, 2395, 2507, 2705, 2714
HpyF3I	CTNAG	8 cut(s)	723, 899, 1033, 1377, 1437, 1548, 1749, 2208
HpySE526I	ACGT	4 cut(s)	145, 531, 1773, 2727
Hsp92I	GRCGYC	1 cut(s)	531
HspAI	GCGC	2 cut(s)	23, 2094
KpnI	GGTACC	1 cut(s)	626
Ksp22I	TGATCA	3 cut(s)	927, 1147, 1537
LmnI	GCTCC	5 cut(s)	733, 796, 970, 1459, 2339
Lsp1109I	GCAGC	3 cut(s)	68, 319, 1003
MabI	ACCWGGT	2 cut(s)	1723, 2254
MaeI	CTAG	7 cut(s)	492, 1122, 1353, 1704, 1965, 2268, 2582
MaeII	ACGT	4 cut(s)	145, 531, 1773, 2727
MaeIII	GTNAC	8 cut(s)	1234, 1829, 1883, 2316, 2404, 2523, 2728, 2751
MboII	GAAGA	8 cut(s)	58, 85, 122, 129, 222, 779, 1947, 2612
MfeI	CAATTG	1 cut(s)	606
MflI	RGATCY	5 cut(s)	1053, 1592, 1741, 2135, 2557
MhlI	GDGCHC	4 cut(s)	41, 574, 1907, 2701
MlyI	GAGTC	3 cut(s)	978, 1312, 1501
MmeI	TCCRAC	1 cut(s)	304
Mph1103I	ATGCAT	1 cut(s)	949
MroXI	GAANNNNTTC	2 cut(s)	771, 2110
MslI	CAYNNNNRTG	4 cut(s)	156, 660, 1424, 1515
MspA1I	CMGCKG	3 cut(s)	431, 1016, 1268
MspCI	CTTAAG	1 cut(s)	26
MspI	CCGG	2 cut(s)	547, 651
MspR9I	CCNGG	5 cut(s)	567, 660, 733, 1725, 2256
MunI	CAATTG	1 cut(s)	606
Mva1269I	GAATGC	2 cut(s)	240, 441
MvaI	CCWGG	5 cut(s)	567, 660, 733, 1725, 2256
MvnI	CGCG	1 cut(s)	2094
MwoI	GCNNNNNNNGC	6 cut(s)	31, 1261, 2395, 2507, 2705, 2714
NdeI	CATATG	2 cut(s)	1524, 2385
NlaIV	GGNNCC	3 cut(s)	624, 729, 2788
NmuCI	GTSAC	4 cut(s)	1883, 2404, 2523, 2751
NsiI	ATGCAT	1 cut(s)	949
NspI	RCATGY	3 cut(s)	671, 691, 2417
NspV	TTCGAA	1 cut(s)	1312
OliI	CACNNNNGTG	1 cut(s)	1424
PaeI	GCATGC	1 cut(s)	2417
PagI	TCATGA	1 cut(s)	1558
PceI	AGGCCT	2 cut(s)	1078, 1225
PciI	ACATGT	1 cut(s)	687
PctI	GAATGC	2 cut(s)	240, 441
PdmI	GAANNNNTTC	2 cut(s)	771, 2110
PfeI	GAWTC	6 cut(s)	113, 176, 358, 519, 1276, 2263
PflMI	CCANNNNNTGG	1 cut(s)	51
PkrI	GCNGC	4 cut(s)	83, 334, 1018, 2093
PleI	GAGTC	3 cut(s)	978, 1312, 1501
PmaCI	CACGTG	1 cut(s)	1774
PmlI	CACGTG	1 cut(s)	1774
PpsI	GAGTC	3 cut(s)	978, 1312, 1501
Ppu21I	YACGTR	1 cut(s)	1774
PscI	ACATGT	1 cut(s)	687
PshBI	ATTAAT	2 cut(s)	101, 525
Psp124BI	GAGCTC	1 cut(s)	1907
Psp6I	CCWGG	5 cut(s)	565, 658, 731, 1723, 2254
PspCI	CACGTG	1 cut(s)	1774
PspFI	CCCAGC	2 cut(s)	204, 617
PspGI	CCWGG	5 cut(s)	565, 658, 731, 1723, 2254
PspN4I	GGNNCC	3 cut(s)	624, 729, 2788
PspPI	GGNCC	4 cut(s)	1262, 2164, 2373, 2827
PstNI	CAGNNNCTG	1 cut(s)	1850
PsuI	RGATCY	5 cut(s)	1053, 1592, 1741, 2135, 2557
PvuII	CAGCTG	3 cut(s)	431, 1016, 1268
RsaI	GTAC	6 cut(s)	148, 624, 1213, 1624, 1951, 1962
RsaNI	GTAC	6 cut(s)	147, 623, 1212, 1623, 1950, 1961
RseI	CAYNNNNRTG	4 cut(s)	156, 660, 1424, 1515
SacI	GAGCTC	1 cut(s)	1907
SatI	GCNGC	4 cut(s)	82, 333, 1017, 2092
Sau96I	GGNCC	4 cut(s)	1262, 2164, 2373, 2827
SchI	GAGTC	3 cut(s)	978, 1312, 1501
ScrFI	CCNGG	5 cut(s)	567, 660, 733, 1725, 2256
SduI	GDGCHC	4 cut(s)	41, 574, 1907, 2701
SexAI	ACCWGGT	2 cut(s)	1723, 2254
SfcI	CTRYAG	1 cut(s)	2709
SfuI	TTCGAA	1 cut(s)	1312
SinI	GGWCC	2 cut(s)	2373, 2827
SmiMI	CAYNNNNRTG	4 cut(s)	156, 660, 1424, 1515
SmlI	CTYRAG	2 cut(s)	26, 2139
SmoI	CTYRAG	2 cut(s)	26, 2139
SpeI	ACTAGT	1 cut(s)	1703
SphI	GCATGC	1 cut(s)	2417
SseBI	AGGCCT	2 cut(s)	1078, 1225
SsiI	CCGC	1 cut(s)	2092
SspI	AATATT	1 cut(s)	781
SspMI	CTAG	7 cut(s)	492, 1122, 1353, 1704, 1965, 2268, 2582
SstI	GAGCTC	1 cut(s)	1907
StuI	AGGCCT	2 cut(s)	1078, 1225
StyD4I	CCNGG	5 cut(s)	565, 658, 731, 1723, 2254
StyI	CCWWGG	1 cut(s)	1964
TaiI	ACGT	4 cut(s)	148, 534, 1776, 2730
TaqI	TCGA	4 cut(s)	142, 1220, 1312, 1877
TatI	WGTACW	1 cut(s)	1622
TauI	GCSGC	1 cut(s)	2094
TfiI	GAWTC	6 cut(s)	113, 176, 358, 519, 1276, 2263
TscAI	CASTG	5 cut(s)	46, 56, 1461, 2367, 2760
TseFI	GTSAC	4 cut(s)	1883, 2404, 2523, 2751
TseI	GCWGC	3 cut(s)	81, 332, 1016
Tsp45I	GTSAC	4 cut(s)	1883, 2404, 2523, 2751
TspDTI	ATGAA	7 cut(s)	302, 511, 1289, 1314, 1547, 1623, 1734
TspGWI	ACGGA	6 cut(s)	1164, 1436, 1792, 1948, 2116, 2386
TspRI	CASTG	5 cut(s)	46, 56, 1461, 2367, 2760
Van91I	CCANNNNNTGG	1 cut(s)	51
Vha464I	CTTAAG	1 cut(s)	26
VneI	GTGCAC	1 cut(s)	37
VpaK11BI	GGWCC	2 cut(s)	2373, 2827
VspI	ATTAAT	2 cut(s)	101, 525
XapI	RAATTY	5 cut(s)	254, 601, 771, 840, 1629
XceI	RCATGY	3 cut(s)	671, 691, 2417
XcmI	CCANNNNNNNNNTGG	3 cut(s)	189, 428, 902
XmaJI	CCTAGG	1 cut(s)	1964
XmnI	GAANNNNTTC	2 cut(s)	771, 2110
XspI	CTAG	7 cut(s)	492, 1122, 1353, 1704, 1965, 2268, 2582
ZraI	GACGTC	1 cut(s)	532
Zsp2I	ATGCAT	1 cut(s)	949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.