Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0006361

Physical Location & Seq

Genomic Coordinates Reverse (-)

14873875 .. 14879925

Gene Structure 6051 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g14740.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2892 bp

ATGGGGCTTTTTCTTAAAGAAGCCCTCAAGCGTCTGTGCGGCGCCAATCAGTGGGCTTATGCTGTGTTCTGGAAGATCGGCTGCCAAAACCCTAAACTATTAATTTGGGAAGAATGTCATTACGAACCATCGCTATCTTCTCTACCTAAACGCATTGCTGGAACTGAAAGAGCTGAATTACCATTTGGAGAGTGGGAAGGATGCTGGGTTTCTTCTGAAGTGTGCTCCTCTTCTAATGGCTTTCAACAAGAGGAAAGAGTGTCCTCGCTTATTAACACAATGATGATTGATAAACCGTTTAATATAGTGGGCGAAGGAATGGTTGGACGAGCTGCATTTACAGGGAACCATCAATGGATTCTATCAGGCAATTACACAAAAGATGCCCATCCACCAGAGGTCCTGAATGAGATGCACCACCAATTTTCTGCTGGCATGCAGACAATTGCAGTTATTCCTGTTCTTCCTCATGGTGTTGTTCAACTTGGTTCCTCCTCGGCTATGATGGAGAATTTAGGATTCATCAATGATGTGAAGAGTCTAGTCCTGCAACTAGGACGCATTCCTGGTGTTCTTTTAGCAGAAAACTATGCGACAAAAGATTTGGTTGAGAAGTCTGGGGTACCCTATACTTCCGGAATAGTGGCATCAATGCATCCAGCAGGTAATTATAAAGTAACAGGATCCACACGCACCCATCAAAGCCACTTTACTCAGGCTTCAGGCCTTTCTAGCCAACTATCTCACTCTCTTAAAGATTTTCAGAATAATTCTCAAACCACTTCTTCAACATTTCAAATCCCTAATCTTACCCAAAATCAGCCAAACATTCATGATGATCCTCAACAACCAATGGTTTCTCCATTGATGAAGCTGAATTTTTCTTTGGGTGGCCAACTAAAGGAAAGAGTTCGGGGAGCTGAAGTGATCACCTCAAATTCTGATTTGCGGTCGAACCAGTCAACTACCTCTTACAATTCAGGGGTGGGACTCAAATACCCATCTGGTTTAGGTCAATCAGGTGCAGATCAGGACAGCCTAAAGTTTAAAGAACATATGATCTTGTCTGGTGGTAGCATTAGGCATCATCTTGATAACAACTTTAGCGCATCAAATGGTATCGTGCCTCAATTGGGAACCAATGGAAGTTTAATCTTTGATCAGAGCAAAGGTTCGAGAACAACCACATTGCTTGGAGGAAATCAAGTGCATGGTGGATCAAGTTGTCATTCAAGGCCGATTTCTGTTCCTTGCACTATTTCAGACCCCAACAGGGTAGCTGACATCAACCTCTGTGGTGGACGTCTGTCGCGAGTTGAATTTGAAAAGGCTGATGCATTCCAAACAGGAGGAGCTTCTTCATCCAGTGTAGCAGGTCCATCGGCTTCTAATAACATGCCTTCCAAAGGCTCTGACCAGAGACAGTTTTCCACCGATGTGAAGCTTACACAGAATGAATTGGCCTCACAAAGGATAGATGATGAACTGTTTCAAGCCCTTAATATTCCGTTGACTCATCAAGATGAGCGTATCCCTGTGAACGCACACATCCCTGATATTGTTCTTGATGATTTTGATTATAAAATCTGTAGTCCAAGATCTGCAAATGCTACAAATGATGTGTGTACTCAGATTTCATCAGGGGATGATTTGTTTGATGTTTTGGGTATGGATTTTAAAAATAAGCTGTTTAACGGCAACTGGAGTAATTTGCTTGCTGATGAGACACACTCAAACTCAAAAGACTTGGGTGAGAATACTATGAAGTTTACAAATGTGCAGGAGTTGGGTTCTGATTATCATTCAGCAGGTCAAGAAATCTCAGTTGGTAGCATTTTCTCTGGGGCAGGTACTGACCATCTTTTAGATGCTGTGGTCTCTCGGGCTCAGCCTGCTGTCAAGCAGAACTCTGATGATAATGTGTCTTGTAGAACAACATTGACAAAAATCAGTAGTTCTACCGTCCCCAGTAGCTCTCCCACTTACGGACGGATTAGTATGTCTAATCATGTGCATGGCGAGAAATATGGCCTTCGTAAATCTCTTGTAAAAGCAGGCCCCGAAGAAACTAGTTCTTTCCAATCTGGCTGTAGCAGGGAGGATATGCTAAACTGTTCCCAGACTAACTCCATATATGGATCTCAAATTAGTTCTTGGGTTGAACAGGGTAATAGCACCAATCACGAGAGCAGTGTTTCAACAGCATATTCTAAGAGGCCTGATATAGTAGGAAAATCAAATCGCAAAAGGCTTAAACCTGGAGAGAACCCTAGACCAAGGCCAAAAGATCGTCAGATGATCGATCGTGTGAAAGAGTTGCGTGATATTGTGCCAAATGGTGCAAAATGTAGCATAGATGCACTGTTTGAACGGACCATCAAGCATATGCTTTTCTTGCAAAGTGTCACAAAGCATGCTGACAAGCTAAAACAAACGGGAGAGTCTAAGATTATTGGCACAGATGATGGACTGGTTCTAAAAGACAACTTTGATGGAGGGGCGACATGGGCTTTTAAGGTTGGGACGCAATCAACGGTTTGTCCTATCATCGTTGAGGATCTCGATCCACCTCGTCAGATGCTTGTGGAGATGCTTTGTGAAGAACAGGGTTTCTTTTTAGAAATTGCTGATTTAATAAGAGGTTTGGGCTTGACCATCTTGAAGGGGGTAATGGAAGCTCGGAATGATAAGATATGGGCGCGCTTTGCAGTAGAGGCAAATAGGGACGTAACGAGGGTGGAAATATTTATGTCGCTTGTTCACCTTTTGGAGCAAACTGTGAAAGGCACTGCCTCATCAGCCAATGCCATGACGAACAATATGATGGTCCCCCACTCTTTTGCTCAAGCAGCCCCAATACGTGCAACTGGCAGGGCTAGTAATTTGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0010015 GO:0010073 GO:0010074 GO:0010078 GO:0010468 GO:0010479 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0098727 GO:0099402 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

964

Amino Acids

104.94

Weight (kDa)

6.29

Isoelectric Point (pI)

33.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27230 AT2G27230
fragaria_vesca	FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430
malus_domestica	MD03G1116900.v1.1 MD03G1155700.v1.1 MD11G1173100.v1.1
prunus_persica	Prupe.6G144300_v2.0.a1
pyrus_communis	pycom03g10980 pycom11g14740
rosa_chinensis	RchiOBHm_Chr5g0048491
rosa_laevigata	RLG00000034527
rosa_multiflora	Rmu_sc0001173.1_g000023
rosa_roxburghii	Rroxscaffold_1G00033350
rosa_rugosa	Rorug05G0238400 Rorug05G0238500
rosa_samantha	Rh5AG318800 Rh5BG328800 Rh5CG354800 Rh5DG339800
rosa_wichuraiana	Rw5G029780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	672, 1581
AatII	GACGTC	1 cut(s)	1306
Acc36I	ACCTGC	4 cut(s)	653, 1364, 1799, 1838
Acc65I	GGTACC	1 cut(s)	622
AccB1I	GGYRCC	2 cut(s)	41, 622
AccB7I	CCANNNNNTGG	1 cut(s)	51
AccII	CGCG	2 cut(s)	1312, 2701
AccIII	TCCGGA	1 cut(s)	635
AciI	CCGC	2 cut(s)	39, 949
AclWI	GGATC	7 cut(s)	678, 691, 833, 1225, 2146, 2558, 2565
AcoI	YGGCCR	1 cut(s)	892
AcsI	RAATTY	4 cut(s)	511, 877, 937, 1319
AcuI	CTGAAG	3 cut(s)	237, 705, 942
AcyI	GRCGYC	2 cut(s)	42, 1303
AfaI	GTAC	3 cut(s)	624, 1627, 1852
AfiI	CCNNNNNNNGG	7 cut(s)	51, 901, 1133, 1273, 1406, 1470, 1985
AhlI	ACTAGT	1 cut(s)	2069
AjnI	CCWGG	2 cut(s)	565, 2257
AjuI	GAANNNNNNNTTGG	8 cut(s)	168, 200, 306, 338, 869, 901, 1809, 1841
AleI	CACNNNNGTG	1 cut(s)	1436
Alw21I	GWGCWC	1 cut(s)	227
Alw26I	GTCTC	3 cut(s)	1414, 1718, 1882
AlwI	GGATC	7 cut(s)	678, 691, 833, 1225, 2146, 2558, 2565
AlwNI	CAGNNNCTG	1 cut(s)	1853
Ama87I	CYCGRG	1 cut(s)	1881
Aor13HI	TCCGGA	1 cut(s)	635
AoxI	GGCC	8 cut(s)	724, 892, 1235, 1461, 2029, 2056, 2216, 2279
ApeKI	GCWGC	3 cut(s)	81, 332, 2849
ApoI	RAATTY	4 cut(s)	511, 877, 937, 1319
ArsI	GACNNNNNNTTYG	2 cut(s)	586, 618
AseI	ATTAAT	1 cut(s)	101
Asp700I	GAANNNNTTC	2 cut(s)	909, 1488
Asp718I	GGTACC	1 cut(s)	622
AspLEI	GCGC	4 cut(s)	44, 1109, 2701, 2703
AspS9I	GGNCC	5 cut(s)	400, 1376, 2057, 2373, 2827
AsuHPI	GGTGA	3 cut(s)	922, 1763, 2753
AvaI	CYCGRG	1 cut(s)	1881
AvaII	GGWCC	4 cut(s)	400, 1376, 2373, 2827
BalI	TGGCCA	1 cut(s)	894
BamHI	GGATCC	1 cut(s)	683
BanI	GGYRCC	2 cut(s)	41, 622
BanII	GRGCYC	1 cut(s)	1888
BauI	CACGAG	1 cut(s)	2183
Bbv12I	GWGCWC	1 cut(s)	227
BbvI	GCAGC	3 cut(s)	68, 319, 2861
BceAI	ACGGC	1 cut(s)	1711
BcgI	CGANNNNNNTGC	2 cut(s)	1362, 1396
BciT130I	CCWGG	2 cut(s)	567, 2259
BciVI	GTATCC	1 cut(s)	1541
BclI	TGATCA	2 cut(s)	927, 1159
BcoDI	GTCTC	3 cut(s)	1414, 1718, 1882
BcuI	ACTAGT	1 cut(s)	2069
BfaI	CTAG	6 cut(s)	542, 554, 732, 2070, 2271, 2877
BfmI	CTRYAG	2 cut(s)	1588, 2089
BfoI	RGCGCY	1 cut(s)	45
BfuAI	ACCTGC	4 cut(s)	653, 1364, 1799, 1838
BfuI	GTATCC	1 cut(s)	1541
BglII	AGATCT	1 cut(s)	1598
BisI	GCNGC	4 cut(s)	40, 82, 333, 2850
BlpI	GCTNAGC	1 cut(s)	1887
BlsI	GCNGC	4 cut(s)	41, 83, 334, 2851
Bme1390I	CCNGG	2 cut(s)	567, 2259
Bme18I	GGWCC	4 cut(s)	400, 1376, 2373, 2827
BmeT110I	CYCGRG	1 cut(s)	1881
BmgT120I	GGNCC	5 cut(s)	400, 1376, 2057, 2373, 2827
BmiI	GGNNCC	8 cut(s)	43, 347, 490, 624, 685, 1138, 2059, 2829
BmrFI	CCNGG	2 cut(s)	567, 2259
BmrI	ACTGGG	1 cut(s)	1962
BmuI	ACTGGG	1 cut(s)	1962
BoxI	GACNNNNGTC	1 cut(s)	1306
BplI	GAGNNNNNCTC	2 cut(s)	1715, 1747
BpmI	CTGGAG	2 cut(s)	1723, 2280
Bpu1102I	GCTNAGC	1 cut(s)	1887
BpuEI	CTTGAG	2 cut(s)	11, 2829
Bsa29I	ATCGAT	1 cut(s)	2301
BsaAI	YACGTR	1 cut(s)	2861
BsaBI	GATNNNNATC	2 cut(s)	387, 2562
BsaHI	GRCGYC	2 cut(s)	42, 1303
BsaI	GGTCTC	1 cut(s)	1882
BsaJI	CCNNGG	2 cut(s)	495, 2276
BsaWI	WCCGGW	1 cut(s)	635
BsaXI	ACNNNNNCTCC	2 cut(s)	909, 939
Bsc4I	CCNNNNNNNGG	7 cut(s)	51, 901, 1133, 1273, 1406, 1470, 1985
Bse1I	ACTGG	6 cut(s)	958, 1365, 1706, 1968, 2475, 2872
Bse3DI	GCAATG	2 cut(s)	153, 1187
Bse8I	GATNNNNATC	2 cut(s)	387, 2562
BseAI	TCCGGA	1 cut(s)	635
BseBI	CCWGG	2 cut(s)	567, 2259
BseCI	ATCGAT	1 cut(s)	2301
BseDI	CCNNGG	2 cut(s)	495, 2276
BseGI	GGATG	6 cut(s)	206, 388, 655, 1361, 1548, 1651
BseJI	GATNNNNATC	2 cut(s)	387, 2562
BseLI	CCNNNNNNNGG	7 cut(s)	51, 901, 1133, 1273, 1406, 1470, 1985
BseMI	GCAATG	2 cut(s)	153, 1187
BseMII	CTCAG	4 cut(s)	728, 1643, 1836, 1901
BseNI	ACTGG	6 cut(s)	958, 1365, 1706, 1968, 2475, 2872
BsePI	GCGCGC	1 cut(s)	2699
BseRI	GAGGAG	3 cut(s)	217, 484, 1365
BseXI	GCAGC	3 cut(s)	68, 319, 2861
BseYI	CCCAGC	1 cut(s)	204
BsgI	GTGCAG	2 cut(s)	1044, 1799
Bsh1236I	CGCG	2 cut(s)	1312, 2701
Bsh1285I	CGRYCG	2 cut(s)	953, 2305
BshFI	GGCC	8 cut(s)	726, 894, 1237, 1463, 2031, 2058, 2218, 2281
BshNI	GGYRCC	2 cut(s)	41, 622
BshVI	ATCGAT	1 cut(s)	2301
BsiEI	CGRYCG	2 cut(s)	953, 2305
BsiHKAI	GWGCWC	1 cut(s)	227
BsiHKCI	CYCGRG	1 cut(s)	1881
BsiSI	CCGG	1 cut(s)	636
BslFI	GGGAC	5 cut(s)	1002, 1949, 2536, 2738, 2813
BslI	CCNNNNNNNGG	7 cut(s)	51, 901, 1133, 1273, 1406, 1470, 1985
BsmAI	GTCTC	3 cut(s)	1414, 1718, 1882
BsmFI	GGGAC	5 cut(s)	1002, 1949, 2536, 2738, 2813
BsmI	GAATGC	2 cut(s)	561, 1337
BsnI	GGCC	8 cut(s)	726, 894, 1237, 1463, 2031, 2058, 2218, 2281
Bso31I	GGTCTC	1 cut(s)	1882
BsoBI	CYCGRG	1 cut(s)	1881
Bsp1286I	GDGCHC	2 cut(s)	227, 1888
Bsp13I	TCCGGA	1 cut(s)	635
Bsp1720I	GCTNAGC	1 cut(s)	1887
Bsp68I	TCGCGA	1 cut(s)	1312
BspACI	CCGC	2 cut(s)	39, 949
BspANI	GGCC	8 cut(s)	726, 894, 1237, 1463, 2031, 2058, 2218, 2281
BspCNI	CTCAG	4 cut(s)	727, 1642, 1835, 1900
BspDI	ATCGAT	1 cut(s)	2301
BspEI	TCCGGA	1 cut(s)	635
BspFNI	CGCG	2 cut(s)	1312, 2701
BspHI	TCATGA	1 cut(s)	832
BspLI	GGNNCC	8 cut(s)	43, 347, 490, 624, 685, 1138, 2059, 2829
BspMI	ACCTGC	4 cut(s)	653, 1364, 1799, 1838
BspPI	GGATC	7 cut(s)	678, 691, 833, 1225, 2146, 2558, 2565
BspT107I	GGYRCC	2 cut(s)	41, 622
BspTNI	GGTCTC	1 cut(s)	1882
BsrDI	GCAATG	2 cut(s)	153, 1187
BsrI	ACTGG	6 cut(s)	958, 1365, 1706, 1968, 2475, 2872
BssECI	CCNNGG	2 cut(s)	495, 2276
BssHII	GCGCGC	1 cut(s)	2699
BssNI	GRCGYC	2 cut(s)	42, 1303
BssSI	CACGAG	1 cut(s)	2183
BssT1I	CCWWGG	1 cut(s)	2276
Bst2BI	CACGAG	1 cut(s)	2183
Bst2UI	CCWGG	2 cut(s)	567, 2259
Bst4CI	ACNGT	8 cut(s)	297, 1425, 1488, 1963, 2114, 2364, 2536, 2779
Bst6I	CTCTTC	2 cut(s)	235, 530
BstACI	GRCGYC	2 cut(s)	42, 1303
BstBAI	YACGTR	1 cut(s)	2861
BstC8I	GCNNGC	7 cut(s)	433, 437, 1716, 1893, 2056, 2415, 2701
BstDEI	CTNAG	6 cut(s)	714, 1629, 1822, 1887, 2211, 2445
BstENI	CCTNNNNNAGG	2 cut(s)	1404, 1468
BstF5I	GGATG	6 cut(s)	206, 388, 655, 1361, 1548, 1651
BstFNI	CGCG	2 cut(s)	1312, 2701
BstH2I	RGCGCY	1 cut(s)	45
BstHHI	GCGC	4 cut(s)	44, 1109, 2701, 2703
BstMAI	GTCTC	3 cut(s)	1414, 1718, 1882
BstMCI	CGRYCG	2 cut(s)	953, 2305
BstMWI	GCNNNNNNNGC	8 cut(s)	732, 1892, 2395, 2507, 2705, 2714, 2798, 2849
BstNI	CCWGG	2 cut(s)	567, 2259
BstNSI	RCATGY	3 cut(s)	439, 1399, 2417
BstPAI	GACNNNNGTC	1 cut(s)	1306
BstSCI	CCNGG	2 cut(s)	565, 2257
BstSFI	CTRYAG	2 cut(s)	1588, 2089
BstUI	CGCG	2 cut(s)	1312, 2701
BstV1I	GCAGC	3 cut(s)	68, 319, 2861
BstX2I	RGATCY	4 cut(s)	683, 1598, 2138, 2557
BstYI	RGATCY	4 cut(s)	683, 1598, 2138, 2557
Bsu15I	ATCGAT	1 cut(s)	2301
BsuI	GTATCC	1 cut(s)	1541
BsuRI	GGCC	8 cut(s)	726, 894, 1237, 1463, 2031, 2058, 2218, 2281
BsuTUI	ATCGAT	1 cut(s)	2301
BtgZI	GCGATG	1 cut(s)	114
BtsCI	GGATG	6 cut(s)	206, 388, 655, 1361, 1548, 1651
BtsI	GCAGTG	2 cut(s)	2197, 2787
BtsIMutI	CAGTG	5 cut(s)	56, 1372, 2197, 2360, 2787
BtuMI	TCGCGA	1 cut(s)	1312
BveI	ACCTGC	4 cut(s)	653, 1364, 1799, 1838
Cac8I	GCNNGC	7 cut(s)	433, 437, 1716, 1893, 2056, 2415, 2701
CaiI	CAGNNNCTG	1 cut(s)	1853
CciI	TCATGA	1 cut(s)	832
CfoI	GCGC	4 cut(s)	44, 1109, 2701, 2703
Cfr13I	GGNCC	5 cut(s)	400, 1376, 2057, 2373, 2827
ClaI	ATCGAT	1 cut(s)	2301
CseI	GACGC	3 cut(s)	20, 567, 2533
Csp6I	GTAC	3 cut(s)	623, 1626, 1851
CspCI	CAANNNNNGTGG	4 cut(s)	1174, 1209, 1276, 1311
CviQI	GTAC	3 cut(s)	623, 1626, 1851
DdeI	CTNAG	6 cut(s)	714, 1629, 1822, 1887, 2211, 2445
DinI	GGCGCC	1 cut(s)	43
DraI	TTTAAA	2 cut(s)	1048, 1678
EaeI	YGGCCR	1 cut(s)	892
Eam1104I	CTCTTC	2 cut(s)	235, 530
EarI	CTCTTC	2 cut(s)	235, 530
Eco130I	CCWWGG	1 cut(s)	2276
Eco147I	AGGCCT	2 cut(s)	726, 2218
Eco24I	GRGCYC	1 cut(s)	1888
Eco31I	GGTCTC	1 cut(s)	1882
Eco47I	GGWCC	4 cut(s)	400, 1376, 2373, 2827
Eco57I	CTGAAG	3 cut(s)	237, 705, 942
Eco88I	CYCGRG	1 cut(s)	1881
EcoNI	CCTNNNNNAGG	2 cut(s)	1404, 1468
EcoO109I	RGGNCCY	2 cut(s)	400, 2057
EcoRII	CCWGG	2 cut(s)	565, 2257
EcoT14I	CCWWGG	1 cut(s)	2276
EcoT22I	ATGCAT	2 cut(s)	657, 1339
EcoT38I	GRGCYC	1 cut(s)	1888
EgeI	GGCGCC	1 cut(s)	43
EheI	GGCGCC	1 cut(s)	43
ErhI	CCWWGG	1 cut(s)	2276
FaqI	GGGAC	5 cut(s)	1002, 1949, 2536, 2738, 2813
FauNDI	CATATG	2 cut(s)	1056, 2385
FbaI	TGATCA	2 cut(s)	927, 1159
Fnu4HI	GCNGC	4 cut(s)	40, 82, 333, 2850
FokI	GGATG	6 cut(s)	213, 375, 642, 1348, 1535, 1658
FriOI	GRGCYC	1 cut(s)	1888
Fsp4HI	GCNGC	4 cut(s)	40, 82, 333, 2850
FspBI	CTAG	6 cut(s)	542, 554, 732, 2070, 2271, 2877
GlaI	GCGC	4 cut(s)	43, 1108, 2700, 2702
GluI	GCNGC	4 cut(s)	40, 82, 333, 2850
GsaI	CCCAGC	1 cut(s)	208
GsuI	CTGGAG	2 cut(s)	1723, 2280
HaeII	RGCGCY	1 cut(s)	45
HaeIII	GGCC	8 cut(s)	726, 894, 1237, 1463, 2031, 2058, 2218, 2281
HapII	CCGG	1 cut(s)	636
HgaI	GACGC	3 cut(s)	20, 567, 2533
HhaI	GCGC	4 cut(s)	44, 1109, 2701, 2703
Hin1I	GRCGYC	2 cut(s)	42, 1303
Hin6I	GCGC	4 cut(s)	42, 1107, 2699, 2701
HinP1I	GCGC	4 cut(s)	42, 1107, 2699, 2701
HincII	GTYRAC	2 cut(s)	963, 1512
HindII	GTYRAC	2 cut(s)	963, 1512
HindIII	AAGCTT	1 cut(s)	1442
HinfI	GANTC	6 cut(s)	358, 519, 538, 990, 1513, 2441
HpaII	CCGG	1 cut(s)	636
HphI	GGTGA	3 cut(s)	922, 1763, 2753
Hpy166II	GTNNAC	7 cut(s)	963, 1301, 1512, 1540, 1626, 1770, 2761
Hpy8I	GTNNAC	7 cut(s)	963, 1301, 1512, 1540, 1626, 1770, 2761
HpyAV	CCTTC	5 cut(s)	191, 308, 1410, 2042, 2656
HpyCH4III	ACNGT	8 cut(s)	297, 1425, 1488, 1963, 2114, 2364, 2536, 2779
HpyCH4IV	ACGT	3 cut(s)	1303, 2727, 2860
HpyF10VI	GCNNNNNNNGC	8 cut(s)	732, 1892, 2395, 2507, 2705, 2714, 2798, 2849
HpyF3I	CTNAG	6 cut(s)	714, 1629, 1822, 1887, 2211, 2445
HpySE526I	ACGT	3 cut(s)	1303, 2727, 2860
Hsp92I	GRCGYC	2 cut(s)	42, 1303
HspAI	GCGC	4 cut(s)	42, 1107, 2699, 2701
KasI	GGCGCC	1 cut(s)	41
Kpn2I	TCCGGA	1 cut(s)	635
KpnI	GGTACC	1 cut(s)	626
Ksp22I	TGATCA	2 cut(s)	927, 1159
LmnI	GCTCC	4 cut(s)	230, 917, 1352, 2770
Lsp1109I	GCAGC	3 cut(s)	68, 319, 2861
MaeI	CTAG	6 cut(s)	542, 554, 732, 2070, 2271, 2877
MaeII	ACGT	3 cut(s)	1303, 2727, 2860
MaeIII	GTNAC	3 cut(s)	676, 2404, 2728
MfeI	CAATTG	2 cut(s)	444, 1130
MflI	RGATCY	4 cut(s)	683, 1598, 2138, 2557
MhlI	GDGCHC	2 cut(s)	227, 1888
MlsI	TGGCCA	1 cut(s)	894
MluNI	TGGCCA	1 cut(s)	894
Mly113I	GGCGCC	1 cut(s)	42
MlyI	GAGTC	4 cut(s)	547, 984, 1507, 2450
MmeI	TCCRAC	1 cut(s)	304
Mox20I	TGGCCA	1 cut(s)	894
Mph1103I	ATGCAT	2 cut(s)	657, 1339
MroI	TCCGGA	1 cut(s)	635
MroXI	GAANNNNTTC	2 cut(s)	909, 1488
MscI	TGGCCA	1 cut(s)	894
MslI	CAYNNNNRTG	4 cut(s)	281, 1436, 1521, 2013
Msp20I	TGGCCA	1 cut(s)	894
MspI	CCGG	1 cut(s)	636
MspR9I	CCNGG	2 cut(s)	567, 2259
MunI	CAATTG	2 cut(s)	444, 1130
Mva1269I	GAATGC	2 cut(s)	561, 1337
MvaI	CCWGG	2 cut(s)	567, 2259
MvnI	CGCG	2 cut(s)	1312, 2701
MwoI	GCNNNNNNNGC	8 cut(s)	732, 1892, 2395, 2507, 2705, 2714, 2798, 2849
NarI	GGCGCC	1 cut(s)	42
NdeI	CATATG	2 cut(s)	1056, 2385
NlaIV	GGNNCC	8 cut(s)	43, 347, 490, 624, 685, 1138, 2059, 2829
NmeAIII	GCCGAG	1 cut(s)	476
NmuCI	GTSAC	1 cut(s)	2404
NruI	TCGCGA	1 cut(s)	1312
NsiI	ATGCAT	2 cut(s)	657, 1339
NspI	RCATGY	3 cut(s)	439, 1399, 2417
OliI	CACNNNNGTG	1 cut(s)	1436
PaeI	GCATGC	2 cut(s)	439, 2417
PagI	TCATGA	1 cut(s)	832
PauI	GCGCGC	1 cut(s)	2699
PceI	AGGCCT	2 cut(s)	726, 2218
PcsI	WCGNNNNNNNCGW	1 cut(s)	1309
PctI	GAATGC	2 cut(s)	561, 1337
PdmI	GAANNNNTTC	2 cut(s)	909, 1488
PfeI	GAWTC	2 cut(s)	358, 519
PflMI	CCANNNNNTGG	1 cut(s)	51
PkrI	GCNGC	4 cut(s)	41, 83, 334, 2851
Ple19I	CGATCG	1 cut(s)	2305
PleI	GAGTC	4 cut(s)	546, 984, 1507, 2449
PluTI	GGCGCC	1 cut(s)	45
PpsI	GAGTC	4 cut(s)	546, 984, 1507, 2449
Ppu21I	YACGTR	1 cut(s)	2861
PpuMI	RGGWCCY	1 cut(s)	400
PshAI	GACNNNNGTC	1 cut(s)	1306
PshBI	ATTAAT	1 cut(s)	101
PsiI	TTATAA	2 cut(s)	672, 1581
Psp5II	RGGWCCY	1 cut(s)	400
Psp6I	CCWGG	2 cut(s)	565, 2257
PspFI	CCCAGC	1 cut(s)	204
PspGI	CCWGG	2 cut(s)	565, 2257
PspN4I	GGNNCC	8 cut(s)	43, 347, 490, 624, 685, 1138, 2059, 2829
PspPI	GGNCC	5 cut(s)	400, 1376, 2057, 2373, 2827
PspPPI	RGGWCCY	1 cut(s)	400
PstNI	CAGNNNCTG	1 cut(s)	1853
PsuI	RGATCY	4 cut(s)	683, 1598, 2138, 2557
PteI	GCGCGC	1 cut(s)	2699
PvuI	CGATCG	1 cut(s)	2305
RruI	TCGCGA	1 cut(s)	1312
RsaI	GTAC	3 cut(s)	624, 1627, 1852
RsaNI	GTAC	3 cut(s)	623, 1626, 1851
RseI	CAYNNNNRTG	4 cut(s)	281, 1436, 1521, 2013
SatI	GCNGC	4 cut(s)	40, 82, 333, 2850
Sau96I	GGNCC	5 cut(s)	400, 1376, 2057, 2373, 2827
SchI	GAGTC	4 cut(s)	547, 984, 1507, 2450
ScrFI	CCNGG	2 cut(s)	567, 2259
SduI	GDGCHC	2 cut(s)	227, 1888
SfcI	CTRYAG	2 cut(s)	1588, 2089
SfoI	GGCGCC	1 cut(s)	43
SinI	GGWCC	4 cut(s)	400, 1376, 2373, 2827
SmiMI	CAYNNNNRTG	4 cut(s)	281, 1436, 1521, 2013
SmlI	CTYRAG	2 cut(s)	26, 2844
SmoI	CTYRAG	2 cut(s)	26, 2844
SpeI	ACTAGT	1 cut(s)	2069
SphI	GCATGC	2 cut(s)	439, 2417
SseBI	AGGCCT	2 cut(s)	726, 2218
SsiI	CCGC	2 cut(s)	39, 949
SspDI	GGCGCC	1 cut(s)	41
SspI	AATATT	2 cut(s)	1504, 2745
SspMI	CTAG	6 cut(s)	542, 554, 732, 2070, 2271, 2877
StuI	AGGCCT	2 cut(s)	726, 2218
StyD4I	CCNGG	2 cut(s)	565, 2257
StyI	CCWWGG	1 cut(s)	2276
TaaI	ACNGT	8 cut(s)	297, 1425, 1488, 1963, 2114, 2364, 2536, 2779
TaiI	ACGT	3 cut(s)	1306, 2730, 2863
TaqI	TCGA	4 cut(s)	953, 1175, 2301, 2562
TatI	WGTACW	1 cut(s)	1625
TauI	GCSGC	1 cut(s)	42
TfiI	GAWTC	2 cut(s)	358, 519
TscAI	CASTG	5 cut(s)	56, 1372, 2197, 2367, 2794
TseFI	GTSAC	1 cut(s)	2404
TseI	GCWGC	3 cut(s)	81, 332, 2849
Tsp45I	GTSAC	1 cut(s)	2404
TspDTI	ATGAA	8 cut(s)	511, 821, 884, 1350, 1470, 1497, 1626, 1778
TspGWI	ACGGA	4 cut(s)	1497, 2001, 2005, 2386
TspRI	CASTG	5 cut(s)	56, 1372, 2197, 2367, 2794
Van91I	CCANNNNNTGG	1 cut(s)	51
VpaK11BI	GGWCC	4 cut(s)	400, 1376, 2373, 2827
VspI	ATTAAT	1 cut(s)	101
XagI	CCTNNNNNAGG	2 cut(s)	1404, 1468
XapI	RAATTY	4 cut(s)	511, 877, 937, 1319
XceI	RCATGY	3 cut(s)	439, 1399, 2417
XcmI	CCANNNNNNNNNTGG	2 cut(s)	189, 428
XmnI	GAANNNNTTC	2 cut(s)	909, 1488
XspI	CTAG	6 cut(s)	542, 554, 732, 2070, 2271, 2877
ZraI	GACGTC	1 cut(s)	1304
Zsp2I	ATGCAT	2 cut(s)	657, 1339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.