Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0006361

Physical Location & Seq

Genomic Coordinates Reverse (-)

18157607 .. 18165684

Gene Structure 8078 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1155700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGTGCAAATCCTTTTTTCCCACTAGCTTCGCTTCTCTCATGGTCCTCAATGAGATGCACCACCAATTTTCTGCTGGCATGCAGACAGTTGCAGTTATTCCTGTTATTCCTCACGGTGTTGTTCAACTTGGTTCTTCCACAGCTATGATGGAGGATACAGGATTCATCAATGATGTGAAGAGTTTAGTCCTGCAACTAGGACGCGTTCCCGGTGCTCTTTTAGCAGAAAATTATGTGCCAAAAGATTTGGTTGAGAAATCTCGGTTACCCTATACTTCTGGAACAGTGGCATCTATGCATCCAGCAGGTAATTTAAAGGTAACAAGGTCTACACGGATGACTGATAACTACACCCATCAAAGTCACTTTACTCGGGCCTCAGGCCTTTCTGGCCAACTATCTCACTCTCTTCTTAAAGATATTCAGAATAATTCTCAAACCACTTCTTCAGCATTTCAAACCCCAAATCTCACCCAAAGTCTGCCCAAAATTCATGATGATCCTCAACAACCAACAGTTTTTCCATCGATGAAGCCAAGCTTTGATTTGAGTGGCCAACTAAAGGATAGAGTTCGGGGAACTGAATTGATTACCTCGAATTCTGATGCGTGGTTGAACCAGCCGACTCCCTCTTACAATTCAGGGGCGGGACTCAAATACCCGTCTTTAGGTCAATCAGGTTCAGTTCAGAACAGCCTAAAGTTTATAAAACATATGATCTTGTCTGCTGGTAGCATTAGGCATCATCTTGATAAGAACTTTAGCGCATCAAATGGTATCATGCCTCAATTGGGAACAAGTGGAAGTTTAATACTTGATCAGAGCAAAGGTTCGACAACAGCCACATTGCTTGGAGGAAGTCAAGTGCATGGTGGATCGGGTAGTCATTCAAGGCCAATTTCTGTTCCTTGCTCTTTTTCAGACCCCCACAGGGTAGCTGACATCAACCTCTCTGGTGGATGTCTGTCTGGTGTTAAATTTCAAAAGGCTGATGCATTCCAAACGGAAGGAGTTTCTTCATCCAGTGTTGCAGGTCAATCATCTGCTAATAACATGCCTTCCAAAGGCTCTGACCAGAGACAGTTTTCCGCCGATGTGAAGCTTACCCAGAGTGAATTGGCCCCACAAAGGATAGATGATGAATTGTTTCAAGCACTGAACATTCCATTGGCAGATTCACATGAAAATATCCCCTTGAATGCACACATCCCTGGTATTGTTCTCGATGATTTTGATTATAAAAACTGTAGTCCAGGGTCTGCAAATGCTACAAATGATGCATATACTCAGGTTTCATCAGGGGATGATTTGTTTGATGTTTTGGGTATGGATTTTAAAAACAAGCTGTTTAATGGCAATTGGAATAATTTGCTTGCTGATGAGACACATTCAGACGCAAAAGATGTAGGTGAGAATACTTCAACATTTACAAATGTGCAGGAGTTGGCTTCAGATTATAATCCAGCAGGTCAAGAAATATCAAATGGTTGCATTTTCTCTGGGGCAGGCACTGAACATCTTTTAGATGCTGTGGTCTCTCGGGCTCAGTCTGCTGTCAAGCAGAACTCTGATGATAATGTGTCTTGTAGAACAACATTGACAAAAATCAGTAGCTCTTCCGTCCCTAATAGTTCTTCCCCGTATGGACGAATTATTATGTCTAATGATGTGCACGGGGAGAAATTTGGCCTTCCTAAAGCTCTTGTAAAGGCAGGGACGGAAGAAACTAGTTCCTTTCAGTCTGGGTGTAGAAGAGAGGATGCGGGAAACTGTTCACTGACTAACTCTATATATGGATCTCAAATTAGTTCTTGGGTTAAACAGGGTAATAGTGCAAATCATGAGAGCAGTGTTTCAACAGCATATTCTAAGAGGCCTGATATGATAGGAAAATCAAATCGCAAAAGGCTTAAGCCTGGAGAGAACCCTAGACCAAGGCCAAAAGATCGTCAGATGATCCAAGATCGTGTGAAGGAGTTGCGTGATATTGTGCCAAATGGGGCAAAATGTAGCATAGATGCACTGCTTGAACGCACCATCAAGCATATGCTGTTCTTGCAAGGTGTCACAAAGCATGCCGACGAGCTAAAACAAACGGGAGAGTCAAAGACAACTTTGATGGAGGGGCAAACATGGGCTTTTGACGTTGGGACACAATCAATGGTTTGCCCTATCATCGTTGAGGATCTCAATCCACCCCGTCAGATGCTTGTGGAGATGCTCTGTGAAGAACAGGGTTTCTTTTTAGAAATAGCTGATTTAATCAGAGGTATGGGTTTGACCATCCTGAAGGGGGTGATGGAAGCTCGGAATGATAAGATATGGGCGTGCTTTGCAGTAGAGGCCAATAGGGACGTAACAAGGATGGAAATATTTATGTCACTTGTTCAGCTTTTGGAGCAAACTGTAAAAGGCACTGCGTCATCAGCCAATGCCATGATGAACAATATGATGGTCCACCACTCAATACCTGCAACTGGCAGGCCTAGTAATTTGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0010015 GO:0010073 GO:0010074 GO:0010078 GO:0010468 GO:0010479 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0098727 GO:0099402 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

834

Amino Acids

90.13

Weight (kDa)

6.32

Isoelectric Point (pI)

35.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	21 - 62	1.8e-10	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH_LHW	PF23176	644 - 703	8.3e-33	Transcription factor LHW bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27230 AT2G27230
fragaria_vesca	FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430
malus_domestica	MD03G1116900.v1.1 MD03G1155700.v1.1 MD11G1173100.v1.1
prunus_persica	Prupe.6G144300_v2.0.a1
pyrus_communis	pycom03g10980 pycom11g14740
rosa_chinensis	RchiOBHm_Chr5g0048491
rosa_laevigata	RLG00000034527
rosa_multiflora	Rmu_sc0001173.1_g000023
rosa_roxburghii	Rroxscaffold_1G00033350
rosa_rugosa	Rorug05G0238400 Rorug05G0238500
rosa_samantha	Rh5AG318800 Rh5BG328800 Rh5CG354800 Rh5DG339800
rosa_wichuraiana	Rw5G029780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	707, 1239, 1458
Acc36I	ACCTGC	4 cut(s)	296, 1022, 1457, 2479
AccI	GTMKAC	1 cut(s)	329
AccII	CGCG	1 cut(s)	204
AciI	CCGC	3 cut(s)	647, 1089, 1763
AclWI	GGATC	5 cut(s)	494, 883, 1804, 1951, 2193
AcoI	YGGCCR	2 cut(s)	391, 553
AcsI	RAATTY	4 cut(s)	489, 598, 977, 1682
AcuI	CTGAAG	3 cut(s)	432, 1434, 2309
AfiI	CCNNNNNNNGG	8 cut(s)	562, 668, 791, 931, 1064, 1128, 2293, 2477
AflII	CTTAAG	1 cut(s)	1910
AflIII	ACRYGT	1 cut(s)	202
AhlI	ACTAGT	1 cut(s)	1727
AjnI	CCWGG	3 cut(s)	1210, 1252, 1915
AjuI	GAANNNNNNNTTGG	2 cut(s)	1151, 1183
Alw21I	GWGCWC	2 cut(s)	217, 1674
Alw26I	GTCTC	3 cut(s)	1072, 1376, 1540
Alw44I	GTGCAC	1 cut(s)	1670
AlwI	GGATC	5 cut(s)	494, 883, 1804, 1951, 2193
AlwNI	CAGNNNCTG	2 cut(s)	1259, 1511
Ama87I	CYCGRG	2 cut(s)	372, 1539
ApaLI	GTGCAC	1 cut(s)	1670
ApoI	RAATTY	4 cut(s)	489, 598, 977, 1682
Asp700I	GAANNNNTTC	2 cut(s)	1146, 1771
AspLEI	GCGC	1 cut(s)	767
AspS9I	GGNCC	4 cut(s)	43, 375, 1120, 2455
AsuC2I	CCSGG	1 cut(s)	210
AsuHPI	GGTGA	3 cut(s)	463, 1421, 2308
AvaI	CYCGRG	2 cut(s)	372, 1539
AvaII	GGWCC	2 cut(s)	43, 2455
AxyI	CCTNAGG	1 cut(s)	379
BaeGI	GKGCMC	1 cut(s)	1674
BalI	TGGCCA	2 cut(s)	393, 555
BanII	GRGCYC	1 cut(s)	1546
Bbv12I	GWGCWC	2 cut(s)	217, 1674
BccI	CCATC	9 cut(s)	142, 363, 532, 2045, 2113, 2291, 2293, 2359, 2446
BciT130I	CCWGG	3 cut(s)	1212, 1254, 1917
BciVI	GTATCC	1 cut(s)	148
BclI	TGATCA	1 cut(s)	817
BcnI	CCSGG	1 cut(s)	210
BcoDI	GTCTC	3 cut(s)	1072, 1376, 1540
BcuI	ACTAGT	1 cut(s)	1727
BfaI	CTAG	5 cut(s)	24, 197, 1728, 1929, 2487
BfmI	CTRYAG	1 cut(s)	1246
BfrI	CTTAAG	1 cut(s)	1910
BfuAI	ACCTGC	4 cut(s)	296, 1022, 1457, 2479
BfuI	GTATCC	1 cut(s)	148
BglI	GCCNNNNNGGC	1 cut(s)	390
Bme1390I	CCNGG	4 cut(s)	210, 1212, 1254, 1917
Bme18I	GGWCC	2 cut(s)	43, 2455
BmeT110I	CYCGRG	2 cut(s)	372, 1539
BmgT120I	GGNCC	4 cut(s)	43, 375, 1120, 2455
BmiI	GGNNCC	1 cut(s)	1122
BmrFI	CCNGG	4 cut(s)	210, 1212, 1254, 1917
BpmI	CTGGAG	1 cut(s)	1938
BpuMI	CCSGG	1 cut(s)	210
Bsa29I	ATCGAT	1 cut(s)	527
BsaBI	GATNNNNATC	2 cut(s)	1458, 2190
BsaI	GGTCTC	1 cut(s)	1540
BsaJI	CCNNGG	3 cut(s)	1210, 1253, 1934
Bsc4I	CCNNNNNNNGG	8 cut(s)	562, 668, 791, 931, 1064, 1128, 2293, 2477
Bse1I	ACTGG	2 cut(s)	1023, 2482
Bse21I	CCTNAGG	1 cut(s)	379
Bse3DI	GCAATG	1 cut(s)	845
Bse8I	GATNNNNATC	2 cut(s)	1458, 2190
BseBI	CCWGG	3 cut(s)	1212, 1254, 1917
BseCI	ATCGAT	1 cut(s)	527
BseDI	CCNNGG	3 cut(s)	1210, 1253, 1934
BseGI	GGATG	9 cut(s)	298, 342, 965, 1019, 1206, 1309, 1765, 2283, 2370
BseJI	GATNNNNATC	2 cut(s)	1458, 2190
BseLI	CCNNNNNNNGG	8 cut(s)	562, 668, 791, 931, 1064, 1128, 2293, 2477
BseMI	GCAATG	1 cut(s)	845
BseMII	CTCAG	3 cut(s)	393, 1301, 1559
BseNI	ACTGG	2 cut(s)	1023, 2482
BseSI	GKGCMC	1 cut(s)	1674
BsgI	GTGCAG	1 cut(s)	1457
Bsh1236I	CGCG	1 cut(s)	204
BshVI	ATCGAT	1 cut(s)	527
BsiHKAI	GWGCWC	2 cut(s)	217, 1674
BsiHKCI	CYCGRG	2 cut(s)	372, 1539
BsiSI	CCGG	1 cut(s)	210
BslFI	GGGAC	5 cut(s)	663, 1607, 1729, 2164, 2366
BslI	CCNNNNNNNGG	8 cut(s)	562, 668, 791, 931, 1064, 1128, 2293, 2477
BsmAI	GTCTC	3 cut(s)	1072, 1376, 1540
BsmFI	GGGAC	5 cut(s)	663, 1607, 1729, 2164, 2366
BsmI	GAATGC	2 cut(s)	995, 1204
Bso31I	GGTCTC	1 cut(s)	1540
BsoBI	CYCGRG	2 cut(s)	372, 1539
Bsp1286I	GDGCHC	3 cut(s)	217, 1546, 1674
Bsp143I	GATC	9 cut(s)	499, 717, 817, 875, 1796, 1945, 1956, 1963, 2185
BspACI	CCGC	3 cut(s)	647, 1089, 1763
BspCNI	CTCAG	3 cut(s)	392, 1300, 1558
BspDI	ATCGAT	1 cut(s)	527
BspFNI	CGCG	1 cut(s)	204
BspHI	TCATGA	2 cut(s)	493, 1840
BspLI	GGNNCC	1 cut(s)	1122
BspMI	ACCTGC	4 cut(s)	296, 1022, 1457, 2479
BspPI	GGATC	5 cut(s)	494, 883, 1804, 1951, 2193
BspQI	GCTCTTC	1 cut(s)	1621
BspTI	CTTAAG	1 cut(s)	1910
BspTNI	GGTCTC	1 cut(s)	1540
BsrDI	GCAATG	1 cut(s)	845
BsrI	ACTGG	2 cut(s)	1023, 2482
BssECI	CCNNGG	3 cut(s)	1210, 1253, 1934
BssMI	GATC	9 cut(s)	499, 717, 817, 875, 1796, 1945, 1956, 1963, 2185
BssT1I	CCWWGG	1 cut(s)	1934
Bst2UI	CCWGG	3 cut(s)	1212, 1254, 1917
Bst4CI	ACNGT	8 cut(s)	88, 116, 286, 517, 1083, 1247, 1772, 2407
Bst6I	CTCTTC	4 cut(s)	173, 414, 1621, 1747
BstAFI	CTTAAG	1 cut(s)	1910
BstC8I	GCNNGC	7 cut(s)	76, 80, 1374, 1507, 2076, 2329, 2483
BstDEI	CTNAG	4 cut(s)	379, 1287, 1545, 1869
BstEII	GGTNACC	1 cut(s)	264
BstENI	CCTNNNNNAGG	1 cut(s)	1062
BstF5I	GGATG	9 cut(s)	298, 342, 965, 1019, 1206, 1309, 1765, 2283, 2370
BstFNI	CGCG	1 cut(s)	204
BstHHI	GCGC	1 cut(s)	767
BstKTI	GATC	9 cut(s)	502, 720, 820, 878, 1799, 1948, 1959, 1966, 2188
BstMAI	GTCTC	3 cut(s)	1072, 1376, 1540
BstMBI	GATC	9 cut(s)	499, 717, 817, 875, 1796, 1945, 1956, 1963, 2185
BstMWI	GCNNNNNNNGC	8 cut(s)	221, 390, 1550, 2056, 2333, 2342, 2398, 2426
BstNI	CCWGG	3 cut(s)	1212, 1254, 1917
BstNSI	RCATGY	3 cut(s)	82, 1057, 2078
BstPI	GGTNACC	1 cut(s)	264
BstSCI	CCNGG	4 cut(s)	208, 1210, 1252, 1915
BstSFI	CTRYAG	1 cut(s)	1246
BstSLI	GKGCMC	1 cut(s)	1674
BstUI	CGCG	1 cut(s)	204
BstX2I	RGATCY	2 cut(s)	1796, 2185
BstYI	RGATCY	2 cut(s)	1796, 2185
Bsu15I	ATCGAT	1 cut(s)	527
Bsu36I	CCTNAGG	1 cut(s)	379
BsuI	GTATCC	1 cut(s)	148
BsuTUI	ATCGAT	1 cut(s)	527
BtsCI	GGATG	9 cut(s)	298, 342, 965, 1019, 1206, 1309, 1765, 2283, 2370
BtsI	GCAGTG	3 cut(s)	1855, 2021, 2415
BtsIMutI	CAGTG	8 cut(s)	291, 1030, 1154, 1509, 1775, 1855, 2021, 2415
BveI	ACCTGC	4 cut(s)	296, 1022, 1457, 2479
Cac8I	GCNNGC	7 cut(s)	76, 80, 1374, 1507, 2076, 2329, 2483
CaiI	CAGNNNCTG	2 cut(s)	1259, 1511
CciI	TCATGA	2 cut(s)	493, 1840
CfoI	GCGC	1 cut(s)	767
Cfr13I	GGNCC	4 cut(s)	43, 375, 1120, 2455
ClaI	ATCGAT	1 cut(s)	527
CseI	GACGC	3 cut(s)	210, 1403, 2409
CspCI	CAANNNNNGTGG	2 cut(s)	832, 867
DdeI	CTNAG	4 cut(s)	379, 1287, 1545, 1869
DpnI	GATC	9 cut(s)	501, 719, 819, 877, 1798, 1947, 1958, 1965, 2187
DpnII	GATC	9 cut(s)	499, 717, 817, 875, 1796, 1945, 1956, 1963, 2185
DraI	TTTAAA	2 cut(s)	315, 1336
EaeI	YGGCCR	2 cut(s)	391, 553
Eam1104I	CTCTTC	4 cut(s)	173, 414, 1621, 1747
EarI	CTCTTC	4 cut(s)	173, 414, 1621, 1747
EciI	GGCGGA	1 cut(s)	1078
Eco130I	CCWWGG	1 cut(s)	1934
Eco147I	AGGCCT	3 cut(s)	384, 1876, 2485
Eco24I	GRGCYC	1 cut(s)	1546
Eco31I	GGTCTC	1 cut(s)	1540
Eco47I	GGWCC	2 cut(s)	43, 2455
Eco57I	CTGAAG	3 cut(s)	432, 1434, 2309
Eco81I	CCTNAGG	1 cut(s)	379
Eco88I	CYCGRG	2 cut(s)	372, 1539
Eco91I	GGTNACC	1 cut(s)	264
EcoNI	CCTNNNNNAGG	1 cut(s)	1062
EcoO65I	GGTNACC	1 cut(s)	264
EcoRI	GAATTC	1 cut(s)	598
EcoRII	CCWGG	3 cut(s)	1210, 1252, 1915
EcoT14I	CCWWGG	1 cut(s)	1934
EcoT22I	ATGCAT	3 cut(s)	300, 997, 1282
EcoT38I	GRGCYC	1 cut(s)	1546
ErhI	CCWWGG	1 cut(s)	1934
FalI	AAGNNNNNCTT	2 cut(s)	524, 556
FaqI	GGGAC	5 cut(s)	663, 1607, 1729, 2164, 2366
FauI	CCCGC	2 cut(s)	640, 1756
FauNDI	CATATG	2 cut(s)	714, 2046
FbaI	TGATCA	1 cut(s)	817
FblI	GTMKAC	1 cut(s)	329
FokI	GGATG	9 cut(s)	285, 349, 972, 1006, 1193, 1316, 1772, 2270, 2377
FriOI	GRGCYC	1 cut(s)	1546
FspBI	CTAG	5 cut(s)	24, 197, 1728, 1929, 2487
GlaI	GCGC	1 cut(s)	766
GsuI	CTGGAG	1 cut(s)	1938
HapII	CCGG	1 cut(s)	210
HgaI	GACGC	3 cut(s)	210, 1403, 2409
HhaI	GCGC	1 cut(s)	767
Hin6I	GCGC	1 cut(s)	765
HinP1I	GCGC	1 cut(s)	765
HindIII	AAGCTT	2 cut(s)	538, 1100
HinfI	GANTC	5 cut(s)	162, 625, 651, 1175, 2102
HpaII	CCGG	1 cut(s)	210
HphI	GGTGA	3 cut(s)	463, 1421, 2308
Hpy166II	GTNNAC	4 cut(s)	330, 1672, 1775, 2458
Hpy188III	TCNNGA	7 cut(s)	279, 494, 749, 1223, 1472, 1841, 2287
Hpy8I	GTNNAC	4 cut(s)	330, 1672, 1775, 2458
Hpy99I	CGWCG	1 cut(s)	2084
HpyAV	CCTTC	5 cut(s)	1001, 1068, 1700, 1966, 2284
HpyCH4III	ACNGT	8 cut(s)	88, 116, 286, 517, 1083, 1247, 1772, 2407
HpyCH4IV	ACGT	2 cut(s)	2145, 2355
HpyF10VI	GCNNNNNNNGC	8 cut(s)	221, 390, 1550, 2056, 2333, 2342, 2398, 2426
HpyF3I	CTNAG	4 cut(s)	379, 1287, 1545, 1869
HpySE526I	ACGT	2 cut(s)	2145, 2355
HspAI	GCGC	1 cut(s)	765
Ksp22I	TGATCA	1 cut(s)	817
Kzo9I	GATC	9 cut(s)	499, 717, 817, 875, 1796, 1945, 1956, 1963, 2185
LguI	GCTCTTC	1 cut(s)	1621
LmnI	GCTCC	1 cut(s)	2398
MaeI	CTAG	5 cut(s)	24, 197, 1728, 1929, 2487
MaeII	ACGT	2 cut(s)	2145, 2355
MaeIII	GTNAC	6 cut(s)	264, 319, 362, 2065, 2356, 2379
MalI	GATC	9 cut(s)	501, 719, 819, 877, 1798, 1947, 1958, 1965, 2187
MboI	GATC	9 cut(s)	499, 717, 817, 875, 1796, 1945, 1956, 1963, 2185
MfeI	CAATTG	2 cut(s)	788, 1357
MflI	RGATCY	2 cut(s)	1796, 2185
MhlI	GDGCHC	3 cut(s)	217, 1546, 1674
MlsI	TGGCCA	2 cut(s)	393, 555
MluI	ACGCGT	1 cut(s)	202
MluNI	TGGCCA	2 cut(s)	393, 555
MlyI	GAGTC	3 cut(s)	619, 645, 2111
Mox20I	TGGCCA	2 cut(s)	393, 555
Mph1103I	ATGCAT	3 cut(s)	300, 997, 1282
MroXI	GAANNNNTTC	2 cut(s)	1146, 1771
MscI	TGGCCA	2 cut(s)	393, 555
MseI	TTAA	9 cut(s)	314, 414, 809, 975, 1335, 1350, 1818, 1911, 2261
MslI	CAYNNNNRTG	1 cut(s)	143
Msp20I	TGGCCA	2 cut(s)	393, 555
MspCI	CTTAAG	1 cut(s)	1910
MspI	CCGG	1 cut(s)	210
MspR9I	CCNGG	4 cut(s)	210, 1212, 1254, 1917
MunI	CAATTG	2 cut(s)	788, 1357
Mva1269I	GAATGC	2 cut(s)	995, 1204
MvaI	CCWGG	3 cut(s)	1212, 1254, 1917
MvnI	CGCG	1 cut(s)	204
MwoI	GCNNNNNNNGC	8 cut(s)	221, 390, 1550, 2056, 2333, 2342, 2398, 2426
NciI	CCSGG	1 cut(s)	210
NdeI	CATATG	2 cut(s)	714, 2046
NdeII	GATC	9 cut(s)	499, 717, 817, 875, 1796, 1945, 1956, 1963, 2185
NlaIV	GGNNCC	1 cut(s)	1122
NmuCI	GTSAC	3 cut(s)	362, 2065, 2379
NsiI	ATGCAT	3 cut(s)	300, 997, 1282
NspI	RCATGY	3 cut(s)	82, 1057, 2078
PaeI	GCATGC	2 cut(s)	82, 2078
PagI	TCATGA	2 cut(s)	493, 1840
PceI	AGGCCT	3 cut(s)	384, 1876, 2485
PciSI	GCTCTTC	1 cut(s)	1621
PctI	GAATGC	2 cut(s)	995, 1204
PdmI	GAANNNNTTC	2 cut(s)	1146, 1771
PfeI	GAWTC	2 cut(s)	162, 1175
PleI	GAGTC	3 cut(s)	619, 645, 2110
PpsI	GAGTC	3 cut(s)	619, 645, 2110
PsiI	TTATAA	3 cut(s)	707, 1239, 1458
Psp6I	CCWGG	3 cut(s)	1210, 1252, 1915
PspEI	GGTNACC	1 cut(s)	264
PspGI	CCWGG	3 cut(s)	1210, 1252, 1915
PspN4I	GGNNCC	1 cut(s)	1122
PspPI	GGNCC	4 cut(s)	43, 375, 1120, 2455
PstNI	CAGNNNCTG	2 cut(s)	1259, 1511
PsuI	RGATCY	2 cut(s)	1796, 2185
RseI	CAYNNNNRTG	1 cut(s)	143
SapI	GCTCTTC	1 cut(s)	1621
SaqAI	TTAA	9 cut(s)	314, 414, 809, 975, 1335, 1350, 1818, 1911, 2261
Sau3AI	GATC	9 cut(s)	499, 717, 817, 875, 1796, 1945, 1956, 1963, 2185
Sau96I	GGNCC	4 cut(s)	43, 375, 1120, 2455
SchI	GAGTC	3 cut(s)	619, 645, 2111
ScrFI	CCNGG	4 cut(s)	210, 1212, 1254, 1917
SduI	GDGCHC	3 cut(s)	217, 1546, 1674
SfcI	CTRYAG	1 cut(s)	1246
SfiI	GGCCNNNNNGGCC	1 cut(s)	390
SinI	GGWCC	2 cut(s)	43, 2455
SmiMI	CAYNNNNRTG	1 cut(s)	143
SmlI	CTYRAG	1 cut(s)	1910
SmoI	CTYRAG	1 cut(s)	1910
SpeI	ACTAGT	1 cut(s)	1727
SphI	GCATGC	2 cut(s)	82, 2078
SseBI	AGGCCT	3 cut(s)	384, 1876, 2485
SsiI	CCGC	3 cut(s)	647, 1089, 1763
SspI	AATATT	1 cut(s)	2373
SspMI	CTAG	5 cut(s)	24, 197, 1728, 1929, 2487
StuI	AGGCCT	3 cut(s)	384, 1876, 2485
StyD4I	CCNGG	4 cut(s)	208, 1210, 1252, 1915
StyI	CCWWGG	1 cut(s)	1934
TaaI	ACNGT	8 cut(s)	88, 116, 286, 517, 1083, 1247, 1772, 2407
TaiI	ACGT	2 cut(s)	2148, 2358
TaqI	TCGA	4 cut(s)	527, 596, 833, 1224
TfiI	GAWTC	2 cut(s)	162, 1175
Tru1I	TTAA	9 cut(s)	314, 414, 809, 975, 1335, 1350, 1818, 1911, 2261
Tru9I	TTAA	9 cut(s)	314, 414, 809, 975, 1335, 1350, 1818, 1911, 2261
TscAI	CASTG	8 cut(s)	291, 1030, 1161, 1516, 1782, 1855, 2028, 2422
TseFI	GTSAC	3 cut(s)	362, 2065, 2379
Tsp45I	GTSAC	3 cut(s)	362, 2065, 2379
TspDTI	ATGAA	8 cut(s)	154, 482, 545, 1008, 1155, 1197, 1284, 2456
TspGWI	ACGGA	4 cut(s)	349, 1019, 1609, 1733
TspRI	CASTG	8 cut(s)	291, 1030, 1161, 1516, 1782, 1855, 2028, 2422
Vha464I	CTTAAG	1 cut(s)	1910
VneI	GTGCAC	1 cut(s)	1670
VpaK11BI	GGWCC	2 cut(s)	43, 2455
XagI	CCTNNNNNAGG	1 cut(s)	1062
XapI	RAATTY	4 cut(s)	489, 598, 977, 1682
XceI	RCATGY	3 cut(s)	82, 1057, 2078
XcmI	CCANNNNNNNNNTGG	2 cut(s)	71, 145
XmiI	GTMKAC	1 cut(s)	329
XmnI	GAANNNNTTC	2 cut(s)	1146, 1771
XspI	CTAG	5 cut(s)	24, 197, 1728, 1929, 2487
Zsp2I	ATGCAT	3 cut(s)	300, 997, 1282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.