Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001173.1

Orthogroup ID

OG0006361

Physical Location & Seq

Genomic Coordinates Forward (+)

100247 .. 107353

Gene Structure 7107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001173.1_g000023.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2643 bp

atgggcgttttgctcaaagaagcgcttaagaggctgtgcagtgccaatcagtgggcttatgccgtcttctggaagatcggctgccaaaaccctaagacttcaccttctgacatggaagctcagtattggacctcattacaaactgtcatacacatggtcctaaatgagatgcaccaccaattttcagctggaatgcagacagttgcagttattcctgttctccctcacggcgttgttcagcttggttctagtttggctattatggagaatataggattcattaatgacgtcaagagtttgatcctgcaacttggatgtgttcctggtgctcttttatctgaaaattatgagacaaaaagttcagatgagaaagttggggtaccttatactattggaatgctgacaactgttcatccaggcggacatacatcaagttctactcatacgacgagtagcagcaatcatcaaaaccacccatctcaggcttccaggcttgttggtcaaccttctcattctctttatgaagagattcagaatatttctcaagctactgcttcaacatttcaaactcctaaccttacccaaattctgcctaaaattcatgatgaccgtcgacaaccagtgatgaagccaaagtttcctcttggaggccaactaagggatggagttggggtagctgaagtgatctcctccaattctgatgcatggttgaaccaccttgctccttctaatttgaggtgtggactcaagtacccatgtggttctgttcaatcagctgcaagtcagggaagcttagagttgatggaacatcagatcttgtctggtggtagcatgaggcctacttttagtagcaaaattagtgcatcaaacggtttcatgactgagcctagaacaggtggaattctaacccttgatcagagaaaaagtttgataaccactccagcattgcttgggggaagtcaaacacatggtggatcgagtactcattcgaggccaacttcagctacttgttctcatatagagacacacggggcagctgacattaatctctctggaacatatctgtctggggttgaatttcaaaaggctgattcattcaaaacagacaggatttctttatctagtttggcagatcaatcagcttctcaggatatactttcaaaaggctctgaccagaggcagttttccacggaagtgaagcttactcagagtgatttgcctccagtggagcaaaggacggataataaattgtttcaagtcccattgactcatccatgtgaacatgtatcttcgagtgatcacatacctcagattcatgatggtcttgataataaaatttgtaccccaggatctgtaaatgctacaaacgatgatatgtgtactcaatcaggggatgacttgtttgatgttttgggtgtggatttcaaaaataagttgcttaatggtaattggaatagtttgctggctgatgaaccaggttcaaacaaaagagatcttgctgagactactttggcattcacaaatgtgaaggatctggtttctgattattattcagcaagtgaaggcatatcaaacagtagtatcttctctggggcagatgctgaccatcttttagatgctgtggtctcgaaggcgcactctactatcaagcagagctctgatgataatgtgtcttgtaaaacaacattgacaaaaatcagtacctcttctgtccctagtggttctctcacttatggacaggttagcgtgtctaatcaagtgccgggggagacatttgaccttcctaaggatcttggaaaagcaggcttagtagaaatcagttctttcctatctgggtgtagcaggaatgatgcaggaaactgttcacagactacctccatatatggatctcaagttggttcttgggttgaacagggcaataattcaaagcatgatagtagtgtttcaactgcatattctaagaagcctgatctaatggggaaatcaaatcgcaaaaggctgaaacctggcgagaatcctagaccaagaccaaaagatcgccagatgatccaagatcgtgtgaaggagttgcgtgacattgtgccaaatggagcaaaatgtagcatagatgcactgctcgaacgtaccatcaagcatatgcttttcttgcaaagtgtcactaagcatgctgacaagctaaaacaaacaggaagagccaagattattggcaaagaaggtggactgcatctaaaagataactatgatggaagggcaacatgggcttttgatgttgggtcacaatctatggtctgccccatcatagttgaggatctagattcacctcgccagatgcttgtggagatgctttgtgaagaacagggtttctttttagaaattgctgatataattagaggtttgggtttgaccatcttgaaaggggtgatggaaactcggaatgataagatatgggcacgctttgctgtagaggcaaatagggatgtaacaaggatggaaatatttatgtcccttgttcaccttttggagcaaactgtaaaaggcaccacgccatcagtcaatgctatcaagaacaacagtatggtccaccattctttcgcccaagcagccccaatacctgcaactggtaggcccagtggttttcagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0010015 GO:0010073 GO:0010074 GO:0010078 GO:0010468 GO:0010479 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0098727 GO:0099402 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

880

Amino Acids

95.33

Weight (kDa)

6.44

Isoelectric Point (pI)

36.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27230 AT2G27230
fragaria_vesca	FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430
malus_domestica	MD03G1116900.v1.1 MD03G1155700.v1.1 MD11G1173100.v1.1
prunus_persica	Prupe.6G144300_v2.0.a1
pyrus_communis	pycom03g10980 pycom11g14740
rosa_chinensis	RchiOBHm_Chr5g0048491
rosa_laevigata	RLG00000034527
rosa_multiflora	Rmu_sc0001173.1_g000023
rosa_roxburghii	Rroxscaffold_1G00033350
rosa_rugosa	Rorug05G0238400 Rorug05G0238500
rosa_samantha	Rh5AG318800 Rh5BG328800 Rh5CG354800 Rh5DG339800
rosa_wichuraiana	Rw5G029780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	291
Acc36I	ACCTGC	1 cut(s)	2620
Acc65I	GGTACC	1 cut(s)	379
AccB1I	GGYRCC	2 cut(s)	379, 2537
AccB7I	CCANNNNNTGG	1 cut(s)	51
AccI	GTMKAC	1 cut(s)	613
AciI	CCGC	1 cut(s)	420
AclWI	GGATC	8 cut(s)	295, 982, 1357, 1539, 1797, 1894, 2041, 2316
AcsI	RAATTY	5 cut(s)	585, 597, 900, 1076, 1335
AcuI	CTGAAG	2 cut(s)	699, 984
AcyI	GRCGYC	1 cut(s)	288
AdeI	CACNNNGTG	1 cut(s)	971
AfaI	GTAC	7 cut(s)	381, 752, 982, 1342, 1381, 1702, 2125
AfeI	AGCGCT	1 cut(s)	24
AfiI	CCNNNNNNNGG	8 cut(s)	51, 69, 481, 647, 658, 893, 1786, 2618
AflII	CTTAAG	1 cut(s)	26
AflIII	ACRYGT	1 cut(s)	1282
AjnI	CCWGG	6 cut(s)	322, 415, 488, 1345, 1474, 2005
AleI	CACNNNNGTG	2 cut(s)	1193, 1523
Alw21I	GWGCWC	2 cut(s)	331, 1658
Alw26I	GTCTC	5 cut(s)	344, 1016, 1496, 1630, 1763
AlwI	GGATC	8 cut(s)	295, 982, 1357, 1539, 1797, 1894, 2041, 2316
AlwNI	CAGNNNCTG	2 cut(s)	1352, 1601
Aor51HI	AGCGCT	1 cut(s)	24
AoxI	GGCC	4 cut(s)	649, 836, 992, 2624
ApeKI	GCWGC	5 cut(s)	81, 456, 776, 1034, 2600
ApoI	RAATTY	5 cut(s)	585, 597, 900, 1076, 1335
AseI	ATTAAT	2 cut(s)	282, 1044
Asp700I	GAANNNNTTC	2 cut(s)	528, 1861
Asp718I	GGTACC	1 cut(s)	379
AspLEI	GCGC	2 cut(s)	25, 1636
AspS9I	GGNCC	4 cut(s)	129, 157, 2578, 2625
AsuC2I	CCSGG	1 cut(s)	1764
AsuHPI	GGTGA	4 cut(s)	93, 2310, 2431, 2504
AvaII	GGWCC	3 cut(s)	129, 157, 2578
AxyI	CCTNAGG	1 cut(s)	1785
BaeGI	GKGCMC	1 cut(s)	2452
BaeI	ACNNNNGTAYC	4 cut(s)	734, 767, 1564, 1597
BanI	GGYRCC	2 cut(s)	379, 2537
BanII	GRGCYC	1 cut(s)	1658
BbsI	GAAGAC	1 cut(s)	58
Bbv12I	GWGCWC	2 cut(s)	331, 1658
BbvI	GCAGC	5 cut(s)	68, 468, 763, 1046, 2612
BceAI	ACGGC	2 cut(s)	47, 244
BciT130I	CCWGG	6 cut(s)	324, 417, 490, 1347, 1476, 2007
BclI	TGATCA	2 cut(s)	913, 1297
BcnI	CCSGG	1 cut(s)	1764
BcoDI	GTCTC	5 cut(s)	344, 1016, 1496, 1630, 1763
BfaI	CTAG	6 cut(s)	249, 888, 1122, 1716, 2019, 2312
BfmI	CTRYAG	1 cut(s)	2460
BfoI	RGCGCY	1 cut(s)	26
BfrI	CTTAAG	1 cut(s)	26
BfuAI	ACCTGC	1 cut(s)	2620
BglII	AGATCT	2 cut(s)	813, 1492
BisI	GCNGC	5 cut(s)	82, 457, 777, 1035, 2601
BlsI	GCNGC	5 cut(s)	83, 458, 778, 1036, 2602
BmcAI	AGTACT	1 cut(s)	982
Bme1390I	CCNGG	7 cut(s)	324, 417, 490, 1347, 1476, 1764, 2007
Bme18I	GGWCC	3 cut(s)	129, 157, 2578
BmgT120I	GGNCC	4 cut(s)	129, 157, 2578, 2625
BmiI	GGNNCC	2 cut(s)	381, 2539
BmrFI	CCNGG	7 cut(s)	324, 417, 490, 1347, 1476, 1764, 2007
BmrI	ACTGGG	1 cut(s)	2622
BmuI	ACTGGG	1 cut(s)	2622
BpiI	GAAGAC	1 cut(s)	58
BpmI	CTGGAG	2 cut(s)	924, 1206
BpuEI	CTTGAG	3 cut(s)	528, 731, 1875
BpuMI	CCSGG	1 cut(s)	1764
BsaHI	GRCGYC	1 cut(s)	288
BsaI	GGTCTC	1 cut(s)	1630
BsaJI	CCNNGG	3 cut(s)	1188, 1345, 1763
BsaXI	ACNNNNNCTCC	2 cut(s)	657, 687
Bsc4I	CCNNNNNNNGG	8 cut(s)	51, 69, 481, 647, 658, 893, 1786, 2618
Bse1I	ACTGG	4 cut(s)	620, 1223, 2623, 2628
Bse21I	CCTNAGG	1 cut(s)	1785
Bse3DI	GCAATG	1 cut(s)	944
BseBI	CCWGG	6 cut(s)	324, 417, 490, 1347, 1476, 2007
BseDI	CCNNGG	3 cut(s)	1188, 1345, 1763
BseGI	GGATG	7 cut(s)	320, 412, 667, 1270, 1399, 2482, 2493
BseLI	CCNNNNNNNGG	8 cut(s)	51, 69, 481, 647, 658, 893, 1786, 2618
BseMI	GCAATG	1 cut(s)	944
BseMII	CTCAG	7 cut(s)	134, 494, 873, 1160, 1220, 1322, 1491
BseNI	ACTGG	4 cut(s)	620, 1223, 2623, 2628
BseRI	GAGGAG	1 cut(s)	679
BseSI	GKGCMC	1 cut(s)	2452
BseXI	GCAGC	5 cut(s)	68, 468, 763, 1046, 2612
BsgI	GTGCAG	1 cut(s)	58
BshFI	GGCC	4 cut(s)	651, 838, 994, 2626
BshNI	GGYRCC	2 cut(s)	379, 2537
BsiHKAI	GWGCWC	2 cut(s)	331, 1658
BsiSI	CCGG	1 cut(s)	1763
BslFI	GGGAC	3 cut(s)	1244, 1697, 2488
BslI	CCNNNNNNNGG	8 cut(s)	51, 69, 481, 647, 658, 893, 1786, 2618
BsmAI	GTCTC	5 cut(s)	344, 1016, 1496, 1630, 1763
BsmFI	GGGAC	3 cut(s)	1244, 1697, 2488
BsmI	GAATGC	3 cut(s)	198, 402, 1514
BsnI	GGCC	4 cut(s)	651, 838, 994, 2626
Bso31I	GGTCTC	1 cut(s)	1630
Bsp1286I	GDGCHC	3 cut(s)	331, 1658, 2452
BspACI	CCGC	1 cut(s)	420
BspANI	GGCC	4 cut(s)	651, 838, 994, 2626
BspCNI	CTCAG	7 cut(s)	133, 493, 874, 1159, 1219, 1321, 1492
BspHI	TCATGA	3 cut(s)	601, 876, 1315
BspLI	GGNNCC	2 cut(s)	381, 2539
BspMI	ACCTGC	1 cut(s)	2620
BspPI	GGATC	8 cut(s)	295, 982, 1357, 1539, 1797, 1894, 2041, 2316
BspQI	GCTCTTC	1 cut(s)	2185
BspT107I	GGYRCC	2 cut(s)	379, 2537
BspTI	CTTAAG	1 cut(s)	26
BspTNI	GGTCTC	1 cut(s)	1630
BsrDI	GCAATG	1 cut(s)	944
BsrI	ACTGG	4 cut(s)	620, 1223, 2623, 2628
BssECI	CCNNGG	3 cut(s)	1188, 1345, 1763
BssNI	GRCGYC	1 cut(s)	288
Bst2UI	CCWGG	6 cut(s)	324, 417, 490, 1347, 1476, 2007
Bst4CI	ACNGT	9 cut(s)	145, 202, 409, 611, 872, 1577, 1862, 2530, 2573
Bst6I	CTCTTC	3 cut(s)	519, 1711, 2185
BstACI	GRCGYC	1 cut(s)	288
BstAFI	CTTAAG	1 cut(s)	26
BstAPI	GCANNNNNTGC	1 cut(s)	2456
BstC8I	GCNNGC	4 cut(s)	1464, 1804, 2166, 2452
BstDSI	CCRYGG	1 cut(s)	1188
BstENI	CCTNNNNNAGG	3 cut(s)	645, 891, 1784
BstF5I	GGATG	7 cut(s)	320, 412, 667, 1270, 1399, 2482, 2493
BstH2I	RGCGCY	1 cut(s)	26
BstHHI	GCGC	2 cut(s)	25, 1636
BstMAI	GTCTC	5 cut(s)	344, 1016, 1496, 1630, 1763
BstMWI	GCNNNNNNNGC	6 cut(s)	31, 2146, 2258, 2456, 2465, 2600
BstNI	CCWGG	6 cut(s)	324, 417, 490, 1347, 1476, 2007
BstNSI	RCATGY	2 cut(s)	1286, 2168
BstSCI	CCNGG	7 cut(s)	322, 415, 488, 1345, 1474, 1762, 2005
BstSFI	CTRYAG	1 cut(s)	2460
BstSLI	GKGCMC	1 cut(s)	2452
BstV1I	GCAGC	5 cut(s)	68, 468, 763, 1046, 2612
BstV2I	GAAGAC	1 cut(s)	58
BstX2I	RGATCY	7 cut(s)	813, 1349, 1492, 1531, 1789, 1886, 2308
BstYI	RGATCY	7 cut(s)	813, 1349, 1492, 1531, 1789, 1886, 2308
Bsu36I	CCTNAGG	1 cut(s)	1785
BsuRI	GGCC	4 cut(s)	651, 838, 994, 2626
BtgI	CCRYGG	1 cut(s)	1188
BtsCI	GGATG	7 cut(s)	320, 412, 667, 1270, 1399, 2482, 2493
BtsI	GCAGTG	2 cut(s)	46, 2111
BtsIMutI	CAGTG	6 cut(s)	46, 56, 627, 1230, 2111, 2635
BveI	ACCTGC	1 cut(s)	2620
Cac8I	GCNNGC	4 cut(s)	1464, 1804, 2166, 2452
CaiI	CAGNNNCTG	2 cut(s)	1352, 1601
CciI	TCATGA	3 cut(s)	601, 876, 1315
CfoI	GCGC	2 cut(s)	25, 1636
Cfr13I	GGNCC	4 cut(s)	129, 157, 2578, 2625
CsiI	ACCWGGT	1 cut(s)	1474
Csp6I	GTAC	7 cut(s)	380, 751, 981, 1341, 1380, 1701, 2124
CspCI	CAANNNNNGTGG	2 cut(s)	2197, 2232
CviQI	GTAC	7 cut(s)	380, 751, 981, 1341, 1380, 1701, 2124
DraIII	CACNNNGTG	1 cut(s)	971
Eam1104I	CTCTTC	3 cut(s)	519, 1711, 2185
EarI	CTCTTC	3 cut(s)	519, 1711, 2185
EciI	GGCGGA	1 cut(s)	435
Ecl136II	GAGCTC	1 cut(s)	1656
Eco147I	AGGCCT	1 cut(s)	838
Eco24I	GRGCYC	1 cut(s)	1658
Eco31I	GGTCTC	1 cut(s)	1630
Eco47I	GGWCC	3 cut(s)	129, 157, 2578
Eco47III	AGCGCT	1 cut(s)	24
Eco53kI	GAGCTC	1 cut(s)	1656
Eco57I	CTGAAG	2 cut(s)	699, 984
Eco81I	CCTNAGG	1 cut(s)	1785
EcoICRI	GAGCTC	1 cut(s)	1656
EcoNI	CCTNNNNNAGG	3 cut(s)	645, 891, 1784
EcoRI	GAATTC	1 cut(s)	900
EcoRII	CCWGG	6 cut(s)	322, 415, 488, 1345, 1474, 2005
EcoT22I	ATGCAT	1 cut(s)	706
EcoT38I	GRGCYC	1 cut(s)	1658
FalI	AAGNNNNNCTT	4 cut(s)	9, 41, 1185, 1217
FaqI	GGGAC	3 cut(s)	1244, 1697, 2488
FauNDI	CATATG	1 cut(s)	2136
FbaI	TGATCA	2 cut(s)	913, 1297
FblI	GTMKAC	1 cut(s)	613
Fnu4HI	GCNGC	5 cut(s)	82, 457, 777, 1035, 2601
FokI	GGATG	7 cut(s)	327, 399, 674, 1257, 1406, 2489, 2500
FriOI	GRGCYC	1 cut(s)	1658
Fsp4HI	GCNGC	5 cut(s)	82, 457, 777, 1035, 2601
FspBI	CTAG	6 cut(s)	249, 888, 1122, 1716, 2019, 2312
GlaI	GCGC	2 cut(s)	24, 1635
GluI	GCNGC	5 cut(s)	82, 457, 777, 1035, 2601
GsuI	CTGGAG	2 cut(s)	924, 1206
HaeII	RGCGCY	1 cut(s)	26
HaeIII	GGCC	4 cut(s)	651, 838, 994, 2626
HapII	CCGG	1 cut(s)	1763
HhaI	GCGC	2 cut(s)	25, 1636
Hin1I	GRCGYC	1 cut(s)	288
Hin6I	GCGC	2 cut(s)	23, 1634
HinP1I	GCGC	2 cut(s)	23, 1634
HincII	GTYRAC	2 cut(s)	503, 614
HindII	GTYRAC	2 cut(s)	503, 614
HindIII	AAGCTT	2 cut(s)	790, 1199
HinfI	GANTC	8 cut(s)	276, 529, 744, 1091, 1267, 1312, 2014, 2315
HpaII	CCGG	1 cut(s)	1763
HphI	GGTGA	4 cut(s)	93, 2310, 2431, 2504
Hpy166II	GTNNAC	9 cut(s)	503, 614, 743, 1280, 1380, 1865, 2219, 2512, 2581
Hpy8I	GTNNAC	9 cut(s)	503, 614, 743, 1280, 1380, 1865, 2219, 2512, 2581
Hpy99I	CGWCG	2 cut(s)	451, 615
HpyCH4III	ACNGT	9 cut(s)	145, 202, 409, 611, 872, 1577, 1862, 2530, 2573
HpyCH4IV	ACGT	2 cut(s)	288, 2122
HpyF10VI	GCNNNNNNNGC	6 cut(s)	31, 2146, 2258, 2456, 2465, 2600
HpySE526I	ACGT	2 cut(s)	288, 2122
Hsp92I	GRCGYC	1 cut(s)	288
HspAI	GCGC	2 cut(s)	23, 1634
KpnI	GGTACC	1 cut(s)	383
Ksp22I	TGATCA	2 cut(s)	913, 1297
LguI	GCTCTTC	1 cut(s)	2185
LmnI	GCTCC	4 cut(s)	727, 1228, 2090, 2521
Lsp1109I	GCAGC	5 cut(s)	68, 468, 763, 1046, 2612
MabI	ACCWGGT	1 cut(s)	1474
MaeI	CTAG	6 cut(s)	249, 888, 1122, 1716, 2019, 2312
MaeII	ACGT	2 cut(s)	288, 2122
MaeIII	GTNAC	4 cut(s)	2072, 2155, 2274, 2479
MboII	GAAGA	8 cut(s)	58, 85, 536, 1281, 1576, 1698, 2202, 2363
MflI	RGATCY	7 cut(s)	813, 1349, 1492, 1531, 1789, 1886, 2308
MhlI	GDGCHC	3 cut(s)	331, 1658, 2452
MlyI	GAGTC	2 cut(s)	738, 1261
Mph1103I	ATGCAT	1 cut(s)	706
MroXI	GAANNNNTTC	2 cut(s)	528, 1861
MseI	TTAA	4 cut(s)	27, 282, 1044, 1440
MslI	CAYNNNNRTG	4 cut(s)	152, 1193, 1275, 1523
MspA1I	CMGCKG	3 cut(s)	188, 776, 1037
MspCI	CTTAAG	1 cut(s)	26
MspI	CCGG	1 cut(s)	1763
MspR9I	CCNGG	7 cut(s)	324, 417, 490, 1347, 1476, 1764, 2007
Mva1269I	GAATGC	3 cut(s)	198, 402, 1514
MvaI	CCWGG	6 cut(s)	324, 417, 490, 1347, 1476, 2007
MwoI	GCNNNNNNNGC	6 cut(s)	31, 2146, 2258, 2456, 2465, 2600
NciI	CCSGG	1 cut(s)	1764
NdeI	CATATG	1 cut(s)	2136
NlaIV	GGNNCC	2 cut(s)	381, 2539
NmuCI	GTSAC	3 cut(s)	2072, 2155, 2274
NsiI	ATGCAT	1 cut(s)	706
NspI	RCATGY	2 cut(s)	1286, 2168
OliI	CACNNNNGTG	2 cut(s)	1193, 1523
PaeI	GCATGC	1 cut(s)	2168
PagI	TCATGA	3 cut(s)	601, 876, 1315
PceI	AGGCCT	1 cut(s)	838
PciI	ACATGT	1 cut(s)	1282
PciSI	GCTCTTC	1 cut(s)	2185
PctI	GAATGC	3 cut(s)	198, 402, 1514
PdmI	GAANNNNTTC	2 cut(s)	528, 1861
PfeI	GAWTC	6 cut(s)	276, 529, 1091, 1312, 2014, 2315
PflMI	CCANNNNNTGG	1 cut(s)	51
PkrI	GCNGC	5 cut(s)	83, 458, 778, 1036, 2602
PleI	GAGTC	2 cut(s)	738, 1261
PpsI	GAGTC	2 cut(s)	738, 1261
PscI	ACATGT	1 cut(s)	1282
PshBI	ATTAAT	2 cut(s)	282, 1044
Psp124BI	GAGCTC	1 cut(s)	1658
Psp6I	CCWGG	6 cut(s)	322, 415, 488, 1345, 1474, 2005
PspGI	CCWGG	6 cut(s)	322, 415, 488, 1345, 1474, 2005
PspN4I	GGNNCC	2 cut(s)	381, 2539
PspPI	GGNCC	4 cut(s)	129, 157, 2578, 2625
PstNI	CAGNNNCTG	2 cut(s)	1352, 1601
PsuI	RGATCY	7 cut(s)	813, 1349, 1492, 1531, 1789, 1886, 2308
PvuII	CAGCTG	3 cut(s)	188, 776, 1037
RsaI	GTAC	7 cut(s)	381, 752, 982, 1342, 1381, 1702, 2125
RsaNI	GTAC	7 cut(s)	380, 751, 981, 1341, 1380, 1701, 2124
RseI	CAYNNNNRTG	4 cut(s)	152, 1193, 1275, 1523
SacI	GAGCTC	1 cut(s)	1658
SalI	GTCGAC	1 cut(s)	612
SapI	GCTCTTC	1 cut(s)	2185
SaqAI	TTAA	4 cut(s)	27, 282, 1044, 1440
SatI	GCNGC	5 cut(s)	82, 457, 777, 1035, 2601
Sau96I	GGNCC	4 cut(s)	129, 157, 2578, 2625
ScaI	AGTACT	1 cut(s)	982
SchI	GAGTC	2 cut(s)	738, 1261
ScrFI	CCNGG	7 cut(s)	324, 417, 490, 1347, 1476, 1764, 2007
SduI	GDGCHC	3 cut(s)	331, 1658, 2452
SexAI	ACCWGGT	1 cut(s)	1474
SfcI	CTRYAG	1 cut(s)	2460
SinI	GGWCC	3 cut(s)	129, 157, 2578
SmiMI	CAYNNNNRTG	4 cut(s)	152, 1193, 1275, 1523
SmlI	CTYRAG	4 cut(s)	26, 543, 746, 1890
SmoI	CTYRAG	4 cut(s)	26, 543, 746, 1890
SphI	GCATGC	1 cut(s)	2168
SseBI	AGGCCT	1 cut(s)	838
SsiI	CCGC	1 cut(s)	420
SspI	AATATT	2 cut(s)	538, 2496
SspMI	CTAG	6 cut(s)	249, 888, 1122, 1716, 2019, 2312
SstI	GAGCTC	1 cut(s)	1658
StuI	AGGCCT	1 cut(s)	838
StyD4I	CCNGG	7 cut(s)	322, 415, 488, 1345, 1474, 1762, 2005
TaaI	ACNGT	9 cut(s)	145, 202, 409, 611, 872, 1577, 1862, 2530, 2573
TaiI	ACGT	2 cut(s)	291, 2125
TaqI	TCGA	6 cut(s)	613, 977, 989, 1292, 1628, 2118
TatI	WGTACW	2 cut(s)	980, 1379
TfiI	GAWTC	6 cut(s)	276, 529, 1091, 1312, 2014, 2315
Tru1I	TTAA	4 cut(s)	27, 282, 1044, 1440
Tru9I	TTAA	4 cut(s)	27, 282, 1044, 1440
TscAI	CASTG	6 cut(s)	46, 56, 627, 1230, 2118, 2635
TseFI	GTSAC	3 cut(s)	2072, 2155, 2274
TseI	GCWGC	5 cut(s)	81, 456, 776, 1034, 2600
Tsp45I	GTSAC	3 cut(s)	2072, 2155, 2274
TspDTI	ATGAA	9 cut(s)	268, 401, 537, 590, 641, 865, 1083, 1304, 1485
TspGWI	ACGGA	2 cut(s)	1205, 1253
TspRI	CASTG	6 cut(s)	46, 56, 627, 1230, 2118, 2635
Van91I	CCANNNNNTGG	1 cut(s)	51
Vha464I	CTTAAG	1 cut(s)	26
VpaK11BI	GGWCC	3 cut(s)	129, 157, 2578
VspI	ATTAAT	2 cut(s)	282, 1044
XagI	CCTNNNNNAGG	3 cut(s)	645, 891, 1784
XapI	RAATTY	5 cut(s)	585, 597, 900, 1076, 1335
XbaI	TCTAGA	1 cut(s)	2311
XceI	RCATGY	2 cut(s)	1286, 2168
XcmI	CCANNNNNNNNNTGG	2 cut(s)	185, 659
XmiI	GTMKAC	1 cut(s)	613
XmnI	GAANNNNTTC	2 cut(s)	528, 1861
XspI	CTAG	6 cut(s)	249, 888, 1122, 1716, 2019, 2312
ZraI	GACGTC	1 cut(s)	289
ZrmI	AGTACT	1 cut(s)	982
Zsp2I	ATGCAT	1 cut(s)	706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.