Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0006361

Physical Location & Seq

Genomic Coordinates Reverse (-)

45293740 .. 45302140

Gene Structure 8401 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG328800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGCACCACCAATTTTCAGCTGGAATGCAGACAGTTGCAGTTATTCCTGTTCTCCCTCACGGCGTTGTTCAGCTTGGTTCTAGTTTGGCTATTATGGAGAATATAGGATTCATTAATGACGTCAAGAGTTTGATCCTGCAACTTGGATGTGTTCCTGGTGCTCTTTTATCTGAAAATTATGAGACAAAAAGTTCAGATGAGAAAGTTGGGGTACCTTATACTATTGGAATGCTGACAACTGTTCATCCAGGCGGACATACAACAAGTTCTACTCATACGACGAGTAGCAGCAATCATCAAAACCACCCATCTCAGGCTTCCAGGCTTGTTGGTCAACCTTCTCATTCTCTTTATGAAGAGATTCAGAATATTTCTCAAGCTACTGCGTCAACATTTCAAACTCCTAACCTTACCCAAATTTTGCCTAAAATTCATGTTGACCGTCGACAACCAGTGATGAAGCCAAAGTTTCCTCTTGGAGGCCAACTAAGGGATGGAGTTGGGGTAGCTGAAGTGATCTCCTCCAATTCTGATGCATGGTTGAACCACCTTGCTCCTTCTAATTTGAGGTGTGGACTCAAGTACCCATGTGGTTCTGTTCAATCAGCTGCAAGTCAGGGAAGCTTAGAGTTGATGGAACATCAGATCTTGTCTGGTGGTAGCATGAGGCCTACTTTTAGTAGCAAAATTAGTGCATCAAACGGTTTCATGACTGAGCCTAGAACAGGTGGAATTCTAACCCTTGATCAGAGAAAAAGTTTGATAACCACTCCAGCATTGCTTGGGAGAAGTCAAACACATGGTGGATCGAGTACTCATTCGAGGCCAACTTCAGCTACTTGTTCTCATATAGAGACACACGGGTCAGCTGACATTAATCTCTCTGGAACATATCTGTCTGGGGTTGAATTTCAAAAGGCTGATTCATTCAAAACAGACAGGATTTCTTTATCTAGTTTGGCAGATCAATCAGCTTCTCAGGATATACTTTCAAAAGGCTCTGACCAGAGGCAGTTTTCCACAGAAGTGAAGCTTACTCAGAGTGATTTGCCTCCAGTGGAGCAAAGGACGGATAATAAATTGTTTCAAGTCCCATTGACTCATCCATGTGAACATGTATCTTCGAGTGATCACATACCTCAGATTCATGATGGTCTTGATAATAAAATCTGTACCCCAGGATCTGTAAATGCTACAAACGATGATATGTGTACTCAAACAGGGGATGACTTGTTTGATGTTTTGGGTGTGGATTTCAAAAATAAGTTGCTTAATGGTAATTGGAATAGTTTGCTGGCTGATGAACCAGGTTCAAACAAAAGAGATCTTGCTGAGACTACTTTGGCATTCACAAATGTGAAGGATCTGGTTTCTGATTATTATTCAGCAAGTGAAGGCATATCAAACAGTAGCATCTTCTCTGGGGCAGATGCTGACCATCTTTTAGATGCTGTGGTCTCGAAGGCGCACTCTACTATCAAGCAGAGCTCTGATGATAATGCGTCTTGTAAAACAACATTGACAAAAATCAGTACCTCTTCTGTCCCTAGTGGTTCTCTCACTTATGGACAGGTTAGCGTGTCTAATCAAGTGCCGGGGGAGACATTTGACGTTCCTAAGGATCTTGGAAAAGCAGGCTTAGTAGAAATCAGTTCTTTCCTATCTGGGTGTAGCAGGGATGATGCAGGAAACTGTTCCCAGACTACCTCCATATATGGATCTCAAGTTAGTTCTTGGGTCGAACAGGGCAATAATTCAAAGCATGATAGTAGTGTTTCAACTGCATATTCTAAGAAGCCTGATCTAATGGGGAAATCAAATCGCAAAAGGCTGAAACCTGGCGAGAATCCTAGACCAAGACCAAAAGATCGCCAGATGATCCAAGATCGTGTGAAGGAGTTGCGTGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTGCTCGAACGTACCATCAAGCATATGCTTTTCTTGCAAAGTGTCACTAAGCATGCTGACAAGCTAAAACAAACAGGGAGAGCCAAGATTATTGGCAAAGAAGGTGGACTGCATCTAAAAGATAACTATGATGGAAGGGCAACATGGGCTTATGATGTTGGGTCACAATCTATGGTCTGCCCCATCATAGTTGAGGATCTAGATTCACCTCGCCAGATGCTTGTGGAGATGCTTTGTGAAGAACAGGGTTTCTTTTTAGAAATTGCTGATATAATTAGAGGTTTGGGTTTGACCATCTTGAAAGGGGTGATGGAAACTCGGAATGATAAGATATGGGCACGCTTTGCTGTAGAGGCAAATAGGGACGTAACAAGGATGGAAATATTTATGTCCCTTGTTCACCTTTTGGAGCAAACTGTAAAAGGCACCGCGCCATCAGTCAATGCTATCAAGAACAACAGTATGGTCCACCATTCTTTCGCCCAAGCAGCCCCAATACCTGCAACTGGTAGGCCCAGTGGTTTTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0010015 GO:0010073 GO:0010074 GO:0010078 GO:0010468 GO:0010479 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0098727 GO:0099402 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

824

Amino Acids

89.03

Weight (kDa)

6.42

Isoelectric Point (pI)

37.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	5 - 44	2.5e-10	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH_LHW	PF23176	618 - 677	1.4e-34	Transcription factor LHW bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27230 AT2G27230
fragaria_vesca	FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430 FvH4_3g26430
malus_domestica	MD03G1116900.v1.1 MD03G1155700.v1.1 MD11G1173100.v1.1
prunus_persica	Prupe.6G144300_v2.0.a1
pyrus_communis	pycom03g10980 pycom11g14740
rosa_chinensis	RchiOBHm_Chr5g0048491
rosa_laevigata	RLG00000034527
rosa_multiflora	Rmu_sc0001173.1_g000023
rosa_roxburghii	Rroxscaffold_1G00033350
rosa_rugosa	Rorug05G0238400 Rorug05G0238500
rosa_samantha	Rh5AG318800 Rh5BG328800 Rh5CG354800 Rh5DG339800
rosa_wichuraiana	Rw5G029780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	862
AatII	GACGTC	1 cut(s)	123
Acc36I	ACCTGC	1 cut(s)	2452
Acc65I	GGTACC	1 cut(s)	211
AccB1I	GGYRCC	2 cut(s)	211, 2369
AccI	GTMKAC	1 cut(s)	445
AccII	CGCG	1 cut(s)	2375
AciI	CCGC	2 cut(s)	252, 2373
AclWI	GGATC	8 cut(s)	127, 814, 1189, 1371, 1629, 1726, 1873, 2148
AcsI	RAATTY	4 cut(s)	417, 429, 732, 908
AcuI	CTGAAG	2 cut(s)	531, 816
AcyI	GRCGYC	1 cut(s)	120
AdeI	CACNNNGTG	1 cut(s)	803
AfaI	GTAC	7 cut(s)	213, 584, 814, 1174, 1213, 1534, 1957
AfiI	CCNNNNNNNGG	5 cut(s)	313, 479, 490, 725, 2450
AflIII	ACRYGT	1 cut(s)	1114
AjnI	CCWGG	6 cut(s)	154, 247, 320, 1177, 1306, 1837
AleI	CACNNNNGTG	2 cut(s)	1025, 1355
Alw21I	GWGCWC	2 cut(s)	163, 1490
Alw26I	GTCTC	5 cut(s)	176, 848, 1328, 1462, 1595
AlwI	GGATC	8 cut(s)	127, 814, 1189, 1371, 1629, 1726, 1873, 2148
AlwNI	CAGNNNCTG	2 cut(s)	1184, 1433
AoxI	GGCC	4 cut(s)	481, 668, 824, 2456
ApeKI	GCWGC	3 cut(s)	288, 608, 2432
ApoI	RAATTY	4 cut(s)	417, 429, 732, 908
AseI	ATTAAT	2 cut(s)	114, 876
Asp700I	GAANNNNTTC	2 cut(s)	360, 1693
Asp718I	GGTACC	1 cut(s)	211
AspLEI	GCGC	2 cut(s)	1468, 2377
AspS9I	GGNCC	2 cut(s)	2410, 2457
AsuC2I	CCSGG	1 cut(s)	1596
AsuHPI	GGTGA	3 cut(s)	2142, 2263, 2336
AvaII	GGWCC	1 cut(s)	2410
AxyI	CCTNAGG	1 cut(s)	1617
BaeGI	GKGCMC	1 cut(s)	2284
BaeI	ACNNNNGTAYC	2 cut(s)	566, 599
BanI	GGYRCC	2 cut(s)	211, 2369
BanII	GRGCYC	1 cut(s)	1490
Bbv12I	GWGCWC	2 cut(s)	163, 1490
BbvI	GCAGC	3 cut(s)	300, 595, 2444
BceAI	ACGGC	1 cut(s)	76
BciT130I	CCWGG	6 cut(s)	156, 249, 322, 1179, 1308, 1839
BclI	TGATCA	2 cut(s)	745, 1129
BcnI	CCSGG	1 cut(s)	1596
BcoDI	GTCTC	5 cut(s)	176, 848, 1328, 1462, 1595
BfaI	CTAG	6 cut(s)	81, 720, 954, 1548, 1851, 2144
BfmI	CTRYAG	1 cut(s)	2292
BfuAI	ACCTGC	1 cut(s)	2452
BglII	AGATCT	2 cut(s)	645, 1324
BisI	GCNGC	3 cut(s)	289, 609, 2433
BlsI	GCNGC	3 cut(s)	290, 610, 2434
BmcAI	AGTACT	1 cut(s)	814
Bme1390I	CCNGG	7 cut(s)	156, 249, 322, 1179, 1308, 1596, 1839
Bme18I	GGWCC	1 cut(s)	2410
BmgT120I	GGNCC	2 cut(s)	2410, 2457
BmiI	GGNNCC	2 cut(s)	213, 2371
BmrFI	CCNGG	7 cut(s)	156, 249, 322, 1179, 1308, 1596, 1839
BmrI	ACTGGG	1 cut(s)	2454
BmuI	ACTGGG	1 cut(s)	2454
BpmI	CTGGAG	2 cut(s)	756, 1038
BpuEI	CTTGAG	3 cut(s)	360, 563, 1707
BpuMI	CCSGG	1 cut(s)	1596
BsaHI	GRCGYC	1 cut(s)	120
BsaI	GGTCTC	1 cut(s)	1462
BsaJI	CCNNGG	2 cut(s)	1177, 1595
BsaXI	ACNNNNNCTCC	2 cut(s)	489, 519
Bsc4I	CCNNNNNNNGG	5 cut(s)	313, 479, 490, 725, 2450
Bse1I	ACTGG	4 cut(s)	452, 1055, 2455, 2460
Bse21I	CCTNAGG	1 cut(s)	1617
Bse3DI	GCAATG	1 cut(s)	776
BseBI	CCWGG	6 cut(s)	156, 249, 322, 1179, 1308, 1839
BseDI	CCNNGG	2 cut(s)	1177, 1595
BseGI	GGATG	7 cut(s)	152, 244, 499, 1102, 1231, 1684, 2325
BseLI	CCNNNNNNNGG	5 cut(s)	313, 479, 490, 725, 2450
BseMI	GCAATG	1 cut(s)	776
BseMII	CTCAG	6 cut(s)	326, 705, 992, 1052, 1154, 1323
BseNI	ACTGG	4 cut(s)	452, 1055, 2455, 2460
BseRI	GAGGAG	1 cut(s)	511
BseSI	GKGCMC	1 cut(s)	2284
BseXI	GCAGC	3 cut(s)	300, 595, 2444
Bsh1236I	CGCG	1 cut(s)	2375
BshFI	GGCC	4 cut(s)	483, 670, 826, 2458
BshNI	GGYRCC	2 cut(s)	211, 2369
BsiHKAI	GWGCWC	2 cut(s)	163, 1490
BsiSI	CCGG	1 cut(s)	1595
BslFI	GGGAC	4 cut(s)	1076, 1529, 2320, 2321
BslI	CCNNNNNNNGG	5 cut(s)	313, 479, 490, 725, 2450
BsmAI	GTCTC	5 cut(s)	176, 848, 1328, 1462, 1595
BsmFI	GGGAC	4 cut(s)	1076, 1529, 2320, 2321
BsmI	GAATGC	3 cut(s)	30, 234, 1346
BsnI	GGCC	4 cut(s)	483, 670, 826, 2458
Bso31I	GGTCTC	1 cut(s)	1462
Bsp1286I	GDGCHC	3 cut(s)	163, 1490, 2284
BspACI	CCGC	2 cut(s)	252, 2373
BspANI	GGCC	4 cut(s)	483, 670, 826, 2458
BspCNI	CTCAG	6 cut(s)	325, 706, 991, 1051, 1153, 1324
BspFNI	CGCG	1 cut(s)	2375
BspHI	TCATGA	2 cut(s)	708, 1147
BspLI	GGNNCC	2 cut(s)	213, 2371
BspMI	ACCTGC	1 cut(s)	2452
BspPI	GGATC	8 cut(s)	127, 814, 1189, 1371, 1629, 1726, 1873, 2148
BspT107I	GGYRCC	2 cut(s)	211, 2369
BspTNI	GGTCTC	1 cut(s)	1462
BsrDI	GCAATG	1 cut(s)	776
BsrI	ACTGG	4 cut(s)	452, 1055, 2455, 2460
BssECI	CCNNGG	2 cut(s)	1177, 1595
BssNI	GRCGYC	1 cut(s)	120
Bst2UI	CCWGG	6 cut(s)	156, 249, 322, 1179, 1308, 1839
Bst4CI	ACNGT	8 cut(s)	34, 241, 443, 704, 1409, 1694, 2362, 2405
Bst6I	CTCTTC	2 cut(s)	351, 1543
BstACI	GRCGYC	1 cut(s)	120
BstAPI	GCANNNNNTGC	1 cut(s)	2288
BstC8I	GCNNGC	4 cut(s)	1296, 1636, 1998, 2284
BstENI	CCTNNNNNAGG	2 cut(s)	477, 723
BstF5I	GGATG	7 cut(s)	152, 244, 499, 1102, 1231, 1684, 2325
BstFNI	CGCG	1 cut(s)	2375
BstHHI	GCGC	2 cut(s)	1468, 2377
BstMAI	GTCTC	5 cut(s)	176, 848, 1328, 1462, 1595
BstMWI	GCNNNNNNNGC	5 cut(s)	1978, 2090, 2288, 2297, 2432
BstNI	CCWGG	6 cut(s)	156, 249, 322, 1179, 1308, 1839
BstNSI	RCATGY	2 cut(s)	1118, 2000
BstSCI	CCNGG	7 cut(s)	154, 247, 320, 1177, 1306, 1594, 1837
BstSFI	CTRYAG	1 cut(s)	2292
BstSLI	GKGCMC	1 cut(s)	2284
BstUI	CGCG	1 cut(s)	2375
BstV1I	GCAGC	3 cut(s)	300, 595, 2444
BstX2I	RGATCY	7 cut(s)	645, 1181, 1324, 1363, 1621, 1718, 2140
BstYI	RGATCY	7 cut(s)	645, 1181, 1324, 1363, 1621, 1718, 2140
Bsu36I	CCTNAGG	1 cut(s)	1617
BsuRI	GGCC	4 cut(s)	483, 670, 826, 2458
BtsCI	GGATG	7 cut(s)	152, 244, 499, 1102, 1231, 1684, 2325
BtsI	GCAGTG	1 cut(s)	1943
BtsIMutI	CAGTG	4 cut(s)	459, 1062, 1943, 2467
BveI	ACCTGC	1 cut(s)	2452
Cac8I	GCNNGC	4 cut(s)	1296, 1636, 1998, 2284
CaiI	CAGNNNCTG	2 cut(s)	1184, 1433
CciI	TCATGA	2 cut(s)	708, 1147
CfoI	GCGC	2 cut(s)	1468, 2377
Cfr13I	GGNCC	2 cut(s)	2410, 2457
CseI	GACGC	2 cut(s)	375, 1491
CsiI	ACCWGGT	1 cut(s)	1306
Csp6I	GTAC	7 cut(s)	212, 583, 813, 1173, 1212, 1533, 1956
CspCI	CAANNNNNGTGG	2 cut(s)	2029, 2064
CviQI	GTAC	7 cut(s)	212, 583, 813, 1173, 1212, 1533, 1956
DraIII	CACNNNGTG	1 cut(s)	803
DrdI	GACNNNNNNGTC	1 cut(s)	862
DseDI	GACNNNNNNGTC	1 cut(s)	862
Eam1104I	CTCTTC	2 cut(s)	351, 1543
EarI	CTCTTC	2 cut(s)	351, 1543
EciI	GGCGGA	1 cut(s)	267
Ecl136II	GAGCTC	1 cut(s)	1488
Eco147I	AGGCCT	1 cut(s)	670
Eco24I	GRGCYC	1 cut(s)	1490
Eco31I	GGTCTC	1 cut(s)	1462
Eco47I	GGWCC	1 cut(s)	2410
Eco53kI	GAGCTC	1 cut(s)	1488
Eco57I	CTGAAG	2 cut(s)	531, 816
Eco81I	CCTNAGG	1 cut(s)	1617
EcoICRI	GAGCTC	1 cut(s)	1488
EcoNI	CCTNNNNNAGG	2 cut(s)	477, 723
EcoRI	GAATTC	1 cut(s)	732
EcoRII	CCWGG	6 cut(s)	154, 247, 320, 1177, 1306, 1837
EcoT22I	ATGCAT	1 cut(s)	538
EcoT38I	GRGCYC	1 cut(s)	1490
FalI	AAGNNNNNCTT	2 cut(s)	1017, 1049
FaqI	GGGAC	4 cut(s)	1076, 1529, 2320, 2321
FauNDI	CATATG	1 cut(s)	1968
FbaI	TGATCA	2 cut(s)	745, 1129
FblI	GTMKAC	1 cut(s)	445
Fnu4HI	GCNGC	3 cut(s)	289, 609, 2433
FokI	GGATG	7 cut(s)	159, 231, 506, 1089, 1238, 1691, 2332
FriOI	GRGCYC	1 cut(s)	1490
Fsp4HI	GCNGC	3 cut(s)	289, 609, 2433
FspBI	CTAG	6 cut(s)	81, 720, 954, 1548, 1851, 2144
GlaI	GCGC	2 cut(s)	1467, 2376
GluI	GCNGC	3 cut(s)	289, 609, 2433
GsuI	CTGGAG	2 cut(s)	756, 1038
HaeIII	GGCC	4 cut(s)	483, 670, 826, 2458
HapII	CCGG	1 cut(s)	1595
HgaI	GACGC	2 cut(s)	375, 1491
HhaI	GCGC	2 cut(s)	1468, 2377
Hin1I	GRCGYC	1 cut(s)	120
Hin6I	GCGC	2 cut(s)	1466, 2375
HinP1I	GCGC	2 cut(s)	1466, 2375
HincII	GTYRAC	4 cut(s)	335, 390, 439, 446
HindII	GTYRAC	4 cut(s)	335, 390, 439, 446
HindIII	AAGCTT	2 cut(s)	622, 1031
HinfI	GANTC	8 cut(s)	108, 361, 576, 923, 1099, 1144, 1846, 2147
HpaII	CCGG	1 cut(s)	1595
HphI	GGTGA	3 cut(s)	2142, 2263, 2336
Hpy99I	CGWCG	2 cut(s)	283, 447
HpyAV	CCTTC	8 cut(s)	348, 567, 1354, 1388, 1456, 1888, 2039, 2073
HpyCH4III	ACNGT	8 cut(s)	34, 241, 443, 704, 1409, 1694, 2362, 2405
HpyCH4IV	ACGT	4 cut(s)	120, 1611, 1954, 2310
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1978, 2090, 2288, 2297, 2432
HpySE526I	ACGT	4 cut(s)	120, 1611, 1954, 2310
Hsp92I	GRCGYC	1 cut(s)	120
HspAI	GCGC	2 cut(s)	1466, 2375
KpnI	GGTACC	1 cut(s)	215
Ksp22I	TGATCA	2 cut(s)	745, 1129
LmnI	GCTCC	4 cut(s)	559, 1060, 1922, 2353
Lsp1109I	GCAGC	3 cut(s)	300, 595, 2444
MabI	ACCWGGT	1 cut(s)	1306
MaeI	CTAG	6 cut(s)	81, 720, 954, 1548, 1851, 2144
MaeII	ACGT	4 cut(s)	120, 1611, 1954, 2310
MaeIII	GTNAC	3 cut(s)	1987, 2106, 2311
MboII	GAAGA	5 cut(s)	368, 1113, 1408, 1530, 2195
MflI	RGATCY	7 cut(s)	645, 1181, 1324, 1363, 1621, 1718, 2140
MhlI	GDGCHC	3 cut(s)	163, 1490, 2284
MlyI	GAGTC	2 cut(s)	570, 1093
Mph1103I	ATGCAT	1 cut(s)	538
MroXI	GAANNNNTTC	2 cut(s)	360, 1693
MseI	TTAA	3 cut(s)	114, 876, 1272
MslI	CAYNNNNRTG	3 cut(s)	1025, 1107, 1355
MspA1I	CMGCKG	3 cut(s)	20, 608, 869
MspI	CCGG	1 cut(s)	1595
MspR9I	CCNGG	7 cut(s)	156, 249, 322, 1179, 1308, 1596, 1839
Mva1269I	GAATGC	3 cut(s)	30, 234, 1346
MvaI	CCWGG	6 cut(s)	156, 249, 322, 1179, 1308, 1839
MvnI	CGCG	1 cut(s)	2375
MwoI	GCNNNNNNNGC	5 cut(s)	1978, 2090, 2288, 2297, 2432
NciI	CCSGG	1 cut(s)	1596
NdeI	CATATG	1 cut(s)	1968
NlaIV	GGNNCC	2 cut(s)	213, 2371
NmuCI	GTSAC	2 cut(s)	1987, 2106
NsiI	ATGCAT	1 cut(s)	538
NspI	RCATGY	2 cut(s)	1118, 2000
OliI	CACNNNNGTG	2 cut(s)	1025, 1355
PaeI	GCATGC	1 cut(s)	2000
PagI	TCATGA	2 cut(s)	708, 1147
PceI	AGGCCT	1 cut(s)	670
PciI	ACATGT	1 cut(s)	1114
PctI	GAATGC	3 cut(s)	30, 234, 1346
PdmI	GAANNNNTTC	2 cut(s)	360, 1693
PfeI	GAWTC	6 cut(s)	108, 361, 923, 1144, 1846, 2147
PkrI	GCNGC	3 cut(s)	290, 610, 2434
PleI	GAGTC	2 cut(s)	570, 1093
PpsI	GAGTC	2 cut(s)	570, 1093
PscI	ACATGT	1 cut(s)	1114
PshBI	ATTAAT	2 cut(s)	114, 876
Psp124BI	GAGCTC	1 cut(s)	1490
Psp6I	CCWGG	6 cut(s)	154, 247, 320, 1177, 1306, 1837
PspGI	CCWGG	6 cut(s)	154, 247, 320, 1177, 1306, 1837
PspN4I	GGNNCC	2 cut(s)	213, 2371
PspPI	GGNCC	2 cut(s)	2410, 2457
PstNI	CAGNNNCTG	2 cut(s)	1184, 1433
PsuI	RGATCY	7 cut(s)	645, 1181, 1324, 1363, 1621, 1718, 2140
PvuII	CAGCTG	3 cut(s)	20, 608, 869
RsaI	GTAC	7 cut(s)	213, 584, 814, 1174, 1213, 1534, 1957
RsaNI	GTAC	7 cut(s)	212, 583, 813, 1173, 1212, 1533, 1956
RseI	CAYNNNNRTG	3 cut(s)	1025, 1107, 1355
SacI	GAGCTC	1 cut(s)	1490
SalI	GTCGAC	1 cut(s)	444
SaqAI	TTAA	3 cut(s)	114, 876, 1272
SatI	GCNGC	3 cut(s)	289, 609, 2433
Sau96I	GGNCC	2 cut(s)	2410, 2457
ScaI	AGTACT	1 cut(s)	814
SchI	GAGTC	2 cut(s)	570, 1093
ScrFI	CCNGG	7 cut(s)	156, 249, 322, 1179, 1308, 1596, 1839
SduI	GDGCHC	3 cut(s)	163, 1490, 2284
SexAI	ACCWGGT	1 cut(s)	1306
SfcI	CTRYAG	1 cut(s)	2292
SinI	GGWCC	1 cut(s)	2410
SmiMI	CAYNNNNRTG	3 cut(s)	1025, 1107, 1355
SmlI	CTYRAG	3 cut(s)	375, 578, 1722
SmoI	CTYRAG	3 cut(s)	375, 578, 1722
SphI	GCATGC	1 cut(s)	2000
SseBI	AGGCCT	1 cut(s)	670
SsiI	CCGC	2 cut(s)	252, 2373
SspI	AATATT	2 cut(s)	370, 2328
SspMI	CTAG	6 cut(s)	81, 720, 954, 1548, 1851, 2144
SstI	GAGCTC	1 cut(s)	1490
StuI	AGGCCT	1 cut(s)	670
StyD4I	CCNGG	7 cut(s)	154, 247, 320, 1177, 1306, 1594, 1837
TaaI	ACNGT	8 cut(s)	34, 241, 443, 704, 1409, 1694, 2362, 2405
TaiI	ACGT	4 cut(s)	123, 1614, 1957, 2313
TaqI	TCGA	7 cut(s)	445, 809, 821, 1124, 1460, 1740, 1950
TatI	WGTACW	2 cut(s)	812, 1211
TfiI	GAWTC	6 cut(s)	108, 361, 923, 1144, 1846, 2147
Tru1I	TTAA	3 cut(s)	114, 876, 1272
Tru9I	TTAA	3 cut(s)	114, 876, 1272
TscAI	CASTG	4 cut(s)	459, 1062, 1950, 2467
TseFI	GTSAC	2 cut(s)	1987, 2106
TseI	GCWGC	3 cut(s)	288, 608, 2432
Tsp45I	GTSAC	2 cut(s)	1987, 2106
TspDTI	ATGAA	9 cut(s)	100, 233, 369, 422, 473, 697, 915, 1136, 1317
TspGWI	ACGGA	1 cut(s)	1085
TspRI	CASTG	4 cut(s)	459, 1062, 1950, 2467
VpaK11BI	GGWCC	1 cut(s)	2410
VspI	ATTAAT	2 cut(s)	114, 876
XagI	CCTNNNNNAGG	2 cut(s)	477, 723
XapI	RAATTY	4 cut(s)	417, 429, 732, 908
XbaI	TCTAGA	1 cut(s)	2143
XceI	RCATGY	2 cut(s)	1118, 2000
XcmI	CCANNNNNNNNNTGG	2 cut(s)	17, 491
XmiI	GTMKAC	1 cut(s)	445
XmnI	GAANNNNTTC	2 cut(s)	360, 1693
XspI	CTAG	6 cut(s)	81, 720, 954, 1548, 1851, 2144
ZraI	GACGTC	1 cut(s)	121
ZrmI	AGTACT	1 cut(s)	814
Zsp2I	ATGCAT	1 cut(s)	538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.