Rho GTPase-activating protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G19390 AT5G19390 AT5G19390 AT5G19390 |
| fragaria_vesca | FvH4_3g27830 FvH4_3g27830 FvH4_3g27830 FvH4_3g27830 |
| malus_domestica | MD03G1165400.v1.1 MD11G1184700.v1.1 |
| prunus_persica | Prupe.4G265200_v2.0.a1 Prupe.4G265200_v2.0.a1 Prupe.4G265200_v2.0.a1 Prupe.4G265300_v2.0.a1 |
| pyrus_communis | pycom03g11990 pycom12g08810 |
| rosa_chinensis | RchiOBHm_Chr5g0050541 |
| rosa_laevigata | RLG00000034705 |
| rosa_multiflora | Rmu_sc0004301.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00030350 |
| rosa_rugosa | Rorug05G0261400 |
| rosa_samantha | Rh5AG333300 Rh5BG343200 Rh5CG370800 Rh5DG355900 |
| rosa_wichuraiana | Rw5G031480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 789 |
| AarI | CACCTGC | 1 cut(s) | 1540 |
| Acc36I | ACCTGC | 1 cut(s) | 1540 |
| AccB1I | GGYRCC | 2 cut(s) | 958, 1866 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 191 |
| AccIII | TCCGGA | 1 cut(s) | 286 |
| AciI | CCGC | 9 cut(s) | 9, 31, 37, 121, 304, 323, 826, 1138, 1176 |
| AclWI | GGATC | 7 cut(s) | 161, 674, 821, 1381, 1587, 2330, 2343 |
| AcoI | YGGCCR | 1 cut(s) | 2046 |
| AcsI | RAATTY | 4 cut(s) | 603, 674, 2245, 2283 |
| AcuI | CTGAAG | 3 cut(s) | 1380, 2055, 2165 |
| AcvI | CACGTG | 1 cut(s) | 1985 |
| AcyI | GRCGYC | 1 cut(s) | 1867 |
| AfaI | GTAC | 6 cut(s) | 589, 648, 753, 1284, 1547, 2365 |
| AfeI | AGCGCT | 1 cut(s) | 1449 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 41, 188, 191, 403, 1876, 2625 |
| AflII | CTTAAG | 2 cut(s) | 317, 2347 |
| AjiI | CACGTC | 1 cut(s) | 296 |
| AjnI | CCWGG | 3 cut(s) | 1869, 2048, 2338 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 44, 76 |
| Alw26I | GTCTC | 3 cut(s) | 320, 836, 1493 |
| AlwI | GGATC | 7 cut(s) | 161, 674, 821, 1381, 1587, 2330, 2343 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 947 |
| Ama87I | CYCGRG | 1 cut(s) | 554 |
| Aor13HI | TCCGGA | 1 cut(s) | 286 |
| Aor51HI | AGCGCT | 1 cut(s) | 1449 |
| AoxI | GGCC | 2 cut(s) | 70, 2046 |
| ApoI | RAATTY | 4 cut(s) | 603, 674, 2245, 2283 |
| AseI | ATTAAT | 1 cut(s) | 1020 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2327, 2553 |
| AspLEI | GCGC | 3 cut(s) | 1450, 1526, 1869 |
| AspS9I | GGNCC | 4 cut(s) | 71, 542, 1270, 1647 |
| AsuC2I | CCSGG | 2 cut(s) | 42, 644 |
| AsuHPI | GGTGA | 6 cut(s) | 206, 719, 1001, 1037, 1521, 2069 |
| AsuNHI | GCTAGC | 1 cut(s) | 1829 |
| AvaI | CYCGRG | 1 cut(s) | 554 |
| AvaII | GGWCC | 3 cut(s) | 542, 1270, 1647 |
| AxyI | CCTNAGG | 1 cut(s) | 1380 |
| BaeGI | GKGCMC | 1 cut(s) | 411 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 579, 612, 638, 671, 2355, 2388 |
| BalI | TGGCCA | 1 cut(s) | 2048 |
| BamHI | GGATCC | 1 cut(s) | 2335 |
| BanI | GGYRCC | 2 cut(s) | 958, 1866 |
| BbrPI | CACGTG | 1 cut(s) | 1985 |
| BbsI | GAAGAC | 6 cut(s) | 52, 342, 359, 511, 822, 1953 |
| BbvCI | CCTCAGC | 1 cut(s) | 1425 |
| BccI | CCATC | 9 cut(s) | 284, 293, 468, 530, 908, 943, 2323, 2479, 2620 |
| BceAI | ACGGC | 1 cut(s) | 849 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1524, 1558 |
| BciT130I | CCWGG | 3 cut(s) | 1871, 2050, 2340 |
| BciVI | GTATCC | 1 cut(s) | 2383 |
| BcnI | CCSGG | 2 cut(s) | 42, 644 |
| BcoDI | GTCTC | 3 cut(s) | 320, 836, 1493 |
| BfaI | CTAG | 5 cut(s) | 171, 524, 1208, 1806, 1830 |
| BfmI | CTRYAG | 3 cut(s) | 939, 1533, 2605 |
| BfoI | RGCGCY | 2 cut(s) | 1451, 1870 |
| BfrI | CTTAAG | 2 cut(s) | 317, 2347 |
| BfuAI | ACCTGC | 1 cut(s) | 1540 |
| BfuI | GTATCC | 1 cut(s) | 2383 |
| BglII | AGATCT | 1 cut(s) | 1924 |
| BmcAI | AGTACT | 1 cut(s) | 2365 |
| Bme1390I | CCNGG | 5 cut(s) | 42, 644, 1871, 2050, 2340 |
| Bme18I | GGWCC | 3 cut(s) | 542, 1270, 1647 |
| BmeT110I | CYCGRG | 1 cut(s) | 554 |
| BmgBI | CACGTC | 1 cut(s) | 296 |
| BmgT120I | GGNCC | 4 cut(s) | 71, 542, 1270, 1647 |
| BmiI | GGNNCC | 6 cut(s) | 572, 960, 1272, 1648, 1868, 2337 |
| BmrFI | CCNGG | 5 cut(s) | 42, 644, 1871, 2050, 2340 |
| BmsI | GCATC | 9 cut(s) | 682, 882, 1225, 1535, 1597, 2113, 2116, 2185, 2489 |
| BmtI | GCTAGC | 1 cut(s) | 1833 |
| BpiI | GAAGAC | 6 cut(s) | 52, 342, 359, 511, 822, 1953 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 725, 757 |
| BpmI | CTGGAG | 5 cut(s) | 732, 800, 1118, 1752, 2284 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1425 |
| BpuEI | CTTGAG | 4 cut(s) | 1059, 1781, 1972, 2036 |
| BpuMI | CCSGG | 2 cut(s) | 42, 644 |
| BsaAI | YACGTR | 1 cut(s) | 1985 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1128 |
| BsaHI | GRCGYC | 1 cut(s) | 1867 |
| BsaJI | CCNNGG | 3 cut(s) | 40, 1710, 2624 |
| BsaWI | WCCGGW | 1 cut(s) | 286 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2234, 2264 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 41, 188, 191, 403, 1876, 2625 |
| Bse1I | ACTGG | 6 cut(s) | 749, 1598, 1881, 1977, 2267, 2299 |
| Bse21I | CCTNAGG | 1 cut(s) | 1380 |
| Bse3DI | GCAATG | 3 cut(s) | 828, 1581, 1696 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1128 |
| BseAI | TCCGGA | 1 cut(s) | 286 |
| BseBI | CCWGG | 3 cut(s) | 1871, 2050, 2340 |
| BseDI | CCNNGG | 3 cut(s) | 40, 1710, 2624 |
| BseGI | GGATG | 7 cut(s) | 295, 697, 1009, 1190, 1588, 2263, 2612 |
| BseJI | GATNNNNATC | 1 cut(s) | 1128 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 41, 188, 191, 403, 1876, 2625 |
| BseMI | GCAATG | 3 cut(s) | 828, 1581, 1696 |
| BseMII | CTCAG | 4 cut(s) | 719, 1164, 1439, 2552 |
| BseNI | ACTGG | 6 cut(s) | 749, 1598, 1881, 1977, 2267, 2299 |
| BseRI | GAGGAG | 5 cut(s) | 644, 1115, 1473, 2033, 2255 |
| BseSI | GKGCMC | 1 cut(s) | 411 |
| BseYI | CCCAGC | 1 cut(s) | 1038 |
| BsgI | GTGCAG | 1 cut(s) | 751 |
| BshFI | GGCC | 2 cut(s) | 72, 2048 |
| BshNI | GGYRCC | 2 cut(s) | 958, 1866 |
| BsiHKCI | CYCGRG | 1 cut(s) | 554 |
| BsiSI | CCGG | 3 cut(s) | 42, 287, 643 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 41, 188, 191, 403, 1876, 2625 |
| BsmAI | GTCTC | 3 cut(s) | 320, 836, 1493 |
| BsnI | GGCC | 2 cut(s) | 72, 2048 |
| BsoBI | CYCGRG | 1 cut(s) | 554 |
| Bsp1286I | GDGCHC | 1 cut(s) | 411 |
| Bsp13I | TCCGGA | 1 cut(s) | 286 |
| Bsp1407I | TGTACA | 1 cut(s) | 1282 |
| Bsp19I | CCATGG | 2 cut(s) | 1710, 2624 |
| BspACI | CCGC | 9 cut(s) | 9, 31, 37, 121, 304, 323, 826, 1138, 1176 |
| BspANI | GGCC | 2 cut(s) | 72, 2048 |
| BspCNI | CTCAG | 4 cut(s) | 720, 1163, 1438, 2551 |
| BspEI | TCCGGA | 1 cut(s) | 286 |
| BspHI | TCATGA | 2 cut(s) | 916, 2218 |
| BspLI | GGNNCC | 6 cut(s) | 572, 960, 1272, 1648, 1868, 2337 |
| BspMAI | CTGCAG | 2 cut(s) | 943, 1537 |
| BspMI | ACCTGC | 1 cut(s) | 1540 |
| BspOI | GCTAGC | 1 cut(s) | 1833 |
| BspPI | GGATC | 7 cut(s) | 161, 674, 821, 1381, 1587, 2330, 2343 |
| BspQI | GCTCTTC | 2 cut(s) | 570, 1734 |
| BspT107I | GGYRCC | 2 cut(s) | 958, 1866 |
| BspTI | CTTAAG | 2 cut(s) | 317, 2347 |
| BsrDI | GCAATG | 3 cut(s) | 828, 1581, 1696 |
| BsrGI | TGTACA | 1 cut(s) | 1282 |
| BsrI | ACTGG | 6 cut(s) | 749, 1598, 1881, 1977, 2267, 2299 |
| BssECI | CCNNGG | 3 cut(s) | 40, 1710, 2624 |
| BssNI | GRCGYC | 1 cut(s) | 1867 |
| BssT1I | CCWWGG | 2 cut(s) | 1710, 2624 |
| Bst2UI | CCWGG | 3 cut(s) | 1871, 2050, 2340 |
| Bst4CI | ACNGT | 5 cut(s) | 277, 615, 1658, 2114, 2138 |
| Bst6I | CTCTTC | 3 cut(s) | 570, 910, 1734 |
| BstACI | GRCGYC | 1 cut(s) | 1867 |
| BstAFI | CTTAAG | 2 cut(s) | 317, 2347 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 947, 1061, 1532 |
| BstAUI | TGTACA | 1 cut(s) | 1282 |
| BstBAI | YACGTR | 1 cut(s) | 1985 |
| BstC8I | GCNNGC | 5 cut(s) | 306, 519, 952, 1321, 1831 |
| BstDEI | CTNAG | 7 cut(s) | 728, 1150, 1380, 1425, 1928, 1998, 2538 |
| BstDSI | CCRYGG | 2 cut(s) | 1710, 2624 |
| BstEII | GGTNACC | 1 cut(s) | 1226 |
| BstF5I | GGATG | 7 cut(s) | 295, 697, 1009, 1190, 1588, 2263, 2612 |
| BstH2I | RGCGCY | 2 cut(s) | 1451, 1870 |
| BstHHI | GCGC | 3 cut(s) | 1450, 1526, 1869 |
| BstMAI | GTCTC | 3 cut(s) | 320, 836, 1493 |
| BstNI | CCWGG | 3 cut(s) | 1871, 2050, 2340 |
| BstNSI | RCATGY | 2 cut(s) | 1960, 2133 |
| BstPI | GGTNACC | 1 cut(s) | 1226 |
| BstSCI | CCNGG | 5 cut(s) | 40, 642, 1869, 2048, 2338 |
| BstSFI | CTRYAG | 3 cut(s) | 939, 1533, 2605 |
| BstSLI | GKGCMC | 1 cut(s) | 411 |
| BstV2I | GAAGAC | 6 cut(s) | 52, 342, 359, 511, 822, 1953 |
| BstX2I | RGATCY | 2 cut(s) | 1924, 2335 |
| BstYI | RGATCY | 2 cut(s) | 1924, 2335 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1380 |
| BsuI | GTATCC | 1 cut(s) | 2383 |
| BsuRI | GGCC | 2 cut(s) | 72, 2048 |
| BtgI | CCRYGG | 2 cut(s) | 1710, 2624 |
| BtrI | CACGTC | 1 cut(s) | 296 |
| BtsCI | GGATG | 7 cut(s) | 295, 697, 1009, 1190, 1588, 2263, 2612 |
| BtsI | GCAGTG | 5 cut(s) | 768, 1186, 1315, 1330, 1635 |
| BtsIMutI | CAGTG | 7 cut(s) | 768, 1186, 1315, 1330, 1635, 1663, 1874 |
| BveI | ACCTGC | 1 cut(s) | 1540 |
| Cac8I | GCNNGC | 5 cut(s) | 306, 519, 952, 1321, 1831 |
| CaiI | CAGNNNCTG | 1 cut(s) | 947 |
| CciI | TCATGA | 2 cut(s) | 916, 2218 |
| CfoI | GCGC | 3 cut(s) | 1450, 1526, 1869 |
| Cfr13I | GGNCC | 4 cut(s) | 71, 542, 1270, 1647 |
| CseI | GACGC | 1 cut(s) | 467 |
| Csp6I | GTAC | 6 cut(s) | 588, 647, 752, 1283, 1546, 2364 |
| CviQI | GTAC | 6 cut(s) | 588, 647, 752, 1283, 1546, 2364 |
| DdeI | CTNAG | 7 cut(s) | 728, 1150, 1380, 1425, 1928, 1998, 2538 |
| DinI | GGCGCC | 1 cut(s) | 1868 |
| DraI | TTTAAA | 2 cut(s) | 160, 2571 |
| EaeI | YGGCCR | 1 cut(s) | 2046 |
| Eam1104I | CTCTTC | 3 cut(s) | 570, 910, 1734 |
| EarI | CTCTTC | 3 cut(s) | 570, 910, 1734 |
| EciI | GGCGGA | 1 cut(s) | 338 |
| Eco130I | CCWWGG | 2 cut(s) | 1710, 2624 |
| Eco47I | GGWCC | 3 cut(s) | 542, 1270, 1647 |
| Eco47III | AGCGCT | 1 cut(s) | 1449 |
| Eco57I | CTGAAG | 3 cut(s) | 1380, 2055, 2165 |
| Eco72I | CACGTG | 1 cut(s) | 1985 |
| Eco81I | CCTNAGG | 1 cut(s) | 1380 |
| Eco88I | CYCGRG | 1 cut(s) | 554 |
| Eco91I | GGTNACC | 1 cut(s) | 1226 |
| EcoO109I | RGGNCCY | 2 cut(s) | 542, 1270 |
| EcoO65I | GGTNACC | 1 cut(s) | 1226 |
| EcoRII | CCWGG | 3 cut(s) | 1869, 2048, 2338 |
| EcoT14I | CCWWGG | 2 cut(s) | 1710, 2624 |
| EcoT22I | ATGCAT | 2 cut(s) | 897, 2131 |
| EgeI | GGCGCC | 1 cut(s) | 1868 |
| EheI | GGCGCC | 1 cut(s) | 1868 |
| ErhI | CCWWGG | 2 cut(s) | 1710, 2624 |
| FauI | CCCGC | 2 cut(s) | 44, 297 |
| FokI | GGATG | 7 cut(s) | 302, 704, 1016, 1177, 1575, 2270, 2599 |
| FspBI | CTAG | 5 cut(s) | 171, 524, 1208, 1806, 1830 |
| GlaI | GCGC | 3 cut(s) | 1449, 1525, 1868 |
| GsaI | CCCAGC | 1 cut(s) | 1042 |
| GsuI | CTGGAG | 5 cut(s) | 732, 800, 1118, 1752, 2284 |
| HaeII | RGCGCY | 2 cut(s) | 1451, 1870 |
| HaeIII | GGCC | 2 cut(s) | 72, 2048 |
| HapII | CCGG | 3 cut(s) | 42, 287, 643 |
| HgaI | GACGC | 1 cut(s) | 467 |
| HhaI | GCGC | 3 cut(s) | 1450, 1526, 1869 |
| Hin1I | GRCGYC | 1 cut(s) | 1867 |
| Hin6I | GCGC | 3 cut(s) | 1448, 1524, 1867 |
| HinP1I | GCGC | 3 cut(s) | 1448, 1524, 1867 |
| HpaII | CCGG | 3 cut(s) | 42, 287, 643 |
| HphI | GGTGA | 6 cut(s) | 206, 719, 1001, 1037, 1521, 2069 |
| Hpy166II | GTNNAC | 2 cut(s) | 1283, 1982 |
| Hpy188I | TCNGA | 8 cut(s) | 254, 334, 425, 729, 813, 1195, 1755, 2125 |
| Hpy8I | GTNNAC | 2 cut(s) | 1283, 1982 |
| HpyAV | CCTTC | 4 cut(s) | 443, 555, 593, 1836 |
| HpyCH4III | ACNGT | 5 cut(s) | 277, 615, 1658, 2114, 2138 |
| HpyCH4IV | ACGT | 4 cut(s) | 295, 723, 1984, 2533 |
| HpyF3I | CTNAG | 7 cut(s) | 728, 1150, 1380, 1425, 1928, 1998, 2538 |
| HpySE526I | ACGT | 4 cut(s) | 295, 723, 1984, 2533 |
| Hsp92I | GRCGYC | 1 cut(s) | 1867 |
| HspAI | GCGC | 3 cut(s) | 1448, 1524, 1867 |
| KasI | GGCGCC | 1 cut(s) | 1866 |
| Kpn2I | TCCGGA | 1 cut(s) | 286 |
| LguI | GCTCTTC | 2 cut(s) | 570, 1734 |
| LmnI | GCTCC | 3 cut(s) | 388, 733, 1616 |
| LweI | GCATC | 9 cut(s) | 682, 882, 1225, 1535, 1597, 2113, 2116, 2185, 2489 |
| MaeI | CTAG | 5 cut(s) | 171, 524, 1208, 1806, 1830 |
| MaeII | ACGT | 4 cut(s) | 295, 723, 1984, 2533 |
| MaeIII | GTNAC | 5 cut(s) | 1226, 1325, 1639, 2132, 2138 |
| MflI | RGATCY | 2 cut(s) | 1924, 2335 |
| MhlI | GDGCHC | 1 cut(s) | 411 |
| MlsI | TGGCCA | 1 cut(s) | 2048 |
| MluNI | TGGCCA | 1 cut(s) | 2048 |
| Mly113I | GGCGCC | 1 cut(s) | 1867 |
| MlyI | GAGTC | 1 cut(s) | 2591 |
| MmeI | TCCRAC | 4 cut(s) | 75, 481, 981, 1351 |
| Mox20I | TGGCCA | 1 cut(s) | 2048 |
| Mph1103I | ATGCAT | 2 cut(s) | 897, 2131 |
| MroI | TCCGGA | 1 cut(s) | 286 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2327, 2553 |
| MscI | TGGCCA | 1 cut(s) | 2048 |
| MslI | CAYNNNNRTG | 1 cut(s) | 915 |
| Msp20I | TGGCCA | 1 cut(s) | 2048 |
| MspA1I | CMGCKG | 1 cut(s) | 1154 |
| MspCI | CTTAAG | 2 cut(s) | 317, 2347 |
| MspI | CCGG | 3 cut(s) | 42, 287, 643 |
| MspR9I | CCNGG | 5 cut(s) | 42, 644, 1871, 2050, 2340 |
| MvaI | CCWGG | 3 cut(s) | 1871, 2050, 2340 |
| NarI | GGCGCC | 1 cut(s) | 1867 |
| NciI | CCSGG | 2 cut(s) | 42, 644 |
| NcoI | CCATGG | 2 cut(s) | 1710, 2624 |
| NheI | GCTAGC | 1 cut(s) | 1829 |
| NlaIV | GGNNCC | 6 cut(s) | 572, 960, 1272, 1648, 1868, 2337 |
| NmuCI | GTSAC | 2 cut(s) | 1325, 2132 |
| NsiI | ATGCAT | 2 cut(s) | 897, 2131 |
| NspI | RCATGY | 2 cut(s) | 1960, 2133 |
| PaeR7I | CTCGAG | 1 cut(s) | 554 |
| PagI | TCATGA | 2 cut(s) | 916, 2218 |
| PaqCI | CACCTGC | 1 cut(s) | 1540 |
| PciSI | GCTCTTC | 2 cut(s) | 570, 1734 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2327, 2553 |
| PflFI | GACNNNGTC | 1 cut(s) | 2600 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 191 |
| PleI | GAGTC | 1 cut(s) | 2591 |
| PluTI | GGCGCC | 1 cut(s) | 1870 |
| PmaCI | CACGTG | 1 cut(s) | 1985 |
| PmlI | CACGTG | 1 cut(s) | 1985 |
| PpsI | GAGTC | 1 cut(s) | 2591 |
| Ppu21I | YACGTR | 1 cut(s) | 1985 |
| PpuMI | RGGWCCY | 2 cut(s) | 542, 1270 |
| PshBI | ATTAAT | 1 cut(s) | 1020 |
| PsiI | TTATAA | 1 cut(s) | 789 |
| Psp5II | RGGWCCY | 2 cut(s) | 542, 1270 |
| Psp6I | CCWGG | 3 cut(s) | 1869, 2048, 2338 |
| PspCI | CACGTG | 1 cut(s) | 1985 |
| PspEI | GGTNACC | 1 cut(s) | 1226 |
| PspFI | CCCAGC | 1 cut(s) | 1038 |
| PspGI | CCWGG | 3 cut(s) | 1869, 2048, 2338 |
| PspN4I | GGNNCC | 6 cut(s) | 572, 960, 1272, 1648, 1868, 2337 |
| PspPI | GGNCC | 4 cut(s) | 71, 542, 1270, 1647 |
| PspPPI | RGGWCCY | 2 cut(s) | 542, 1270 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 630, 662 |
| PstI | CTGCAG | 2 cut(s) | 943, 1537 |
| PstNI | CAGNNNCTG | 1 cut(s) | 947 |
| PsuI | RGATCY | 2 cut(s) | 1924, 2335 |
| PsyI | GACNNNGTC | 1 cut(s) | 2600 |
| PvuII | CAGCTG | 1 cut(s) | 1154 |
| RsaI | GTAC | 6 cut(s) | 589, 648, 753, 1284, 1547, 2365 |
| RsaNI | GTAC | 6 cut(s) | 588, 647, 752, 1283, 1546, 2364 |
| RseI | CAYNNNNRTG | 1 cut(s) | 915 |
| SapI | GCTCTTC | 2 cut(s) | 570, 1734 |
| Sau96I | GGNCC | 4 cut(s) | 71, 542, 1270, 1647 |
| SbfI | CCTGCAGG | 1 cut(s) | 1537 |
| ScaI | AGTACT | 1 cut(s) | 2365 |
| SchI | GAGTC | 1 cut(s) | 2591 |
| ScrFI | CCNGG | 5 cut(s) | 42, 644, 1871, 2050, 2340 |
| SdaI | CCTGCAGG | 1 cut(s) | 1537 |
| SduI | GDGCHC | 1 cut(s) | 411 |
| SfaNI | GCATC | 9 cut(s) | 682, 882, 1225, 1535, 1597, 2113, 2116, 2185, 2489 |
| SfcI | CTRYAG | 3 cut(s) | 939, 1533, 2605 |
| SfoI | GGCGCC | 1 cut(s) | 1868 |
| Sfr274I | CTCGAG | 1 cut(s) | 554 |
| SinI | GGWCC | 3 cut(s) | 542, 1270, 1647 |
| SlaI | CTCGAG | 1 cut(s) | 554 |
| SmiI | ATTTAAAT | 1 cut(s) | 2571 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 915 |
| SmlI | CTYRAG | 7 cut(s) | 317, 554, 1074, 1760, 1951, 2015, 2347 |
| SmoI | CTYRAG | 7 cut(s) | 317, 554, 1074, 1760, 1951, 2015, 2347 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1537 |
| SsiI | CCGC | 9 cut(s) | 9, 31, 37, 121, 304, 323, 826, 1138, 1176 |
| SspDI | GGCGCC | 1 cut(s) | 1866 |
| SspI | AATATT | 3 cut(s) | 837, 882, 1487 |
| SspMI | CTAG | 5 cut(s) | 171, 524, 1208, 1806, 1830 |
| StyD4I | CCNGG | 5 cut(s) | 40, 642, 1869, 2048, 2338 |
| StyI | CCWWGG | 2 cut(s) | 1710, 2624 |
| SwaI | ATTTAAAT | 1 cut(s) | 2571 |
| TaaI | ACNGT | 5 cut(s) | 277, 615, 1658, 2114, 2138 |
| TaiI | ACGT | 4 cut(s) | 298, 726, 1987, 2536 |
| TaqI | TCGA | 7 cut(s) | 555, 799, 925, 1145, 1162, 1892, 2357 |
| TaqII | GACCGA | 1 cut(s) | 46 |
| TatI | WGTACW | 2 cut(s) | 1282, 2363 |
| TauI | GCSGC | 1 cut(s) | 1179 |
| TscAI | CASTG | 7 cut(s) | 775, 1186, 1315, 1330, 1635, 1663, 1881 |
| TseFI | GTSAC | 2 cut(s) | 1325, 2132 |
| Tsp45I | GTSAC | 2 cut(s) | 1325, 2132 |
| TspDTI | ATGAA | 9 cut(s) | 70, 672, 944, 1179, 1260, 1487, 1497, 2235, 2546 |
| TspGWI | ACGGA | 3 cut(s) | 154, 2239, 2348 |
| TspRI | CASTG | 7 cut(s) | 775, 1186, 1315, 1330, 1635, 1663, 1881 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2600 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 191 |
| Vha464I | CTTAAG | 2 cut(s) | 317, 2347 |
| VpaK11BI | GGWCC | 3 cut(s) | 542, 1270, 1647 |
| VspI | ATTAAT | 1 cut(s) | 1020 |
| XapI | RAATTY | 4 cut(s) | 603, 674, 2245, 2283 |
| XbaI | TCTAGA | 1 cut(s) | 1207 |
| XceI | RCATGY | 2 cut(s) | 1960, 2133 |
| XhoI | CTCGAG | 1 cut(s) | 554 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2327, 2553 |
| XspI | CTAG | 5 cut(s) | 171, 524, 1208, 1806, 1830 |
| ZrmI | AGTACT | 1 cut(s) | 2365 |
| Zsp2I | ATGCAT | 2 cut(s) | 897, 2131 |