Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0006813

Physical Location & Seq

Genomic Coordinates Forward (+)

19695087 .. 19710328

Gene Structure 15242 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G265200.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2631 bp

ATGTCGGCCTCTTTAGCTGCTTTTGAGCGCCCAAGACCTGGAGGTTCTAATACGGTCTTCAAGAGTGGCCCACTTTTCATATCTTCGAAAGGCATAGGCTGGAAGTCTTGGAAGAAGCGGTGGTTTATCCTCACACGGACTTCTTTGGTTTTCTTTAAAAATGATCCTAGTGCGCTTCCACAAAGAGGTGGTGAAGTAAATCTGACTTTGGGGGGCATTGACTTGAACAATTCTGGGAGTGTTGTTGTTAGAGAAGATAAAAAGCTGCTGACAGTTTTATTTCCTGATGGACGTGATGGTCGGGCCTTCACCCTTAAGGCTGAGACATCAGAAGACTTGTATGAGTGGAAGACAGCCCTTGAACATGCTCTTGCACAAGCGCCAAGTGCTGCCCTTGTCATGGGACACAATGGGATTTTCCGAAATGACACAAATGATACAATGGAAGGGTCCTTCCATCAATGGAGGGATAAGAGGCCTGTTAAATCTTTGGTTGTTGGAAGACCAATTCTGCTTGCGCTAGAAGATATTGATGGAGGTCCTTCGTTCCTTGAGAAAGCTCTTCGGTTCCTCGAAAAGTTTGGTACTAAAGTTGAAGGAATTTTGCGACAGTCAGCGGATGTTGAGGAGGTAGAACGTAGGGTACAAGAATATGAACAAGGCAAGACTGAATTTGATCCCGGTGAGGACGCTCATGTTATTGGTGATTGTGTCAAGCATGTTCTGAGAGAGTTGCCCTCGTCTCCAGTACCAGCATCTTGCTGCACTGCGTTGCTAGAAGCTTATAAAATTGATCGAAAGGAAGCTCGGATTAATGCAATGCGCTCTTCAATATTGGAGACATTTCCTGAGCCAAACCGCCGTTTATTACAGAGAATTTTGAAGATGATGCATACCATCTCATCTCACTCACATGAGAATCGGATGACTCCATCTGCAGTTGCTGCTTGCATGGCACCCTTGCTCTTACGCCCTCTATTAGCTGGTGAATGTGAGTTGGATGATGAGTTTGATGTGAATGGAGATAATTCTGCCCAGCTTCTTGCTGCAGCAAATGCTGCTAATAATGCGCAAGCGATCATTACAACTCTTTTGGAGGAATATGAAAACATTTTTGATGATGAAAATCTACTACGGTGTTCTATTTCAGCTGATTCTCGGATTGAGAATAGTGGGAGTGAAGATTCTTCTGACGATGAAAATCTTGATGTGAAAGACAATGGTTACCATGATGCAGAAAATGAAGTTGATCCAGAAACAGATGATGACCTTGATCGTGTACATAGTGGAAAATTGAGTGAAAGCAGTGGTTATGCTGGCAGTGACCTCTATGATTATAAGGCATTTGGGGGTGATGATTTGGATGTTGGATCCCCTAAAGGAAATCATGCTTCAGCTGAGAGTTCAAATTTAGGTGTTCCTCAACCAATCAGAGATCCGAATGTTGAAGTAATGGAAAGTGGAACCAAACAGAAAAAAGAAAATGGAACTTCAATTAGTGAGACGGAAACACCAAGCGCATCACCTGCTGGAGAATCTTACAGATCAATGGGAGAGATTCTGTCAGTAATGGATCCAGGGCATCCTTTACAGGTGTCTGGAGTTGAATCAGGAAATGTGAAAGCAGTGGCTAAAGTTACAGGATCCAATCATAATGCAAAGCGCTCGGCATTTTGGGGGAGAAGCAATGCAAGAAAGACACCGTCAATGGAATCAGTTGATTCTTCTGGAGAGGAAGAGCTTTCTATTCAGAGGCTTGAGATTGCAAAAAATGACTTGCAGCACAGGATTGCAAAAGAGGCTAGAGGAAACGCAATTTTACAAGCTAGCTTGGAGAGAAGGAAGCAGGCTTTACATGAGCGGCGCTTGGCACTGGAACAAGACGTTTCAAGATTGCAAGAGCAGCTACAAGCTGAACGAGATCTTAGAGCAGCATTGGAGGTTGGTTTGAGCATGTCTTCGGGACAGTTAGCCAGTTCACGTGGAATGGATTCTAAGACAAGGGCTGAACTTGAGGAGATAGCCCTTGCAGAAGCAGATGTGGCCAGGTTGAAGCAGAAAGTTGCAGAACTCCACCATCAACTTAATCAGCAACGACAGCATCATTACGGTTCTCTATCTGATGCTTGTGACCGTTATCAAAATATCCAAAATCATAATCCTCAACCGAGGTTTCTTCAGCAGGATTTTGATGCAACCCTTGCCTTTTGTAATCATGAAAGGAAACAGAGGAATGAGGAGAGTATGTCAGGGGCAGATTGGAGGAATATCAAAGGGCAAATTTTAGCATCTGGCGGTGGTACAAGGCAGCCTACAAGGAAGCAATTCATGGATCCAGCTGGCATGAGCGAATCAAAAAGTACCGATGCATCGACAAGTTTGTCTGTTGATGATCTTAGTGCTGTAGATTCTGCTTCCATGCCATCAACTTCAAGAGCAGCAGAGGTGGTAGATTACCCAAGGCATCCATCAACAGCATCTTCTGCCTTAGTAGAATTAACAACTCGTCTTGATTTCTTCAAGGAAAGACGCTCTCAGCTGATGGAACAACTTCATAATCTTGATTTAAATTATGGCACAACATCTTTGCAAGACTCTGTGTATAGACCATCATCACCACCATGGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0000911 GO:0000919 GO:0003674 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006996 GO:0007049 GO:0008047 GO:0008150 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009832 GO:0009920 GO:0009987 GO:0016020 GO:0016043 GO:0022402 GO:0022607 GO:0030234 GO:0030695 GO:0031976 GO:0031984 GO:0032506 GO:0034357 GO:0042546 GO:0042651 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043547 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0050790 GO:0051301 GO:0051336 GO:0051345 GO:0055035 GO:0060589 GO:0061640 GO:0065007 GO:0065009 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0098772 GO:0140014 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lzipper-MIP1 PH RhoGAP

Protein Analysis

877

Amino Acids

96.63

Weight (kDa)

5.28

Isoelectric Point (pI)

54.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19390 AT5G19390 AT5G19390 AT5G19390
fragaria_vesca	FvH4_3g27830 FvH4_3g27830 FvH4_3g27830 FvH4_3g27830
malus_domestica	MD03G1165400.v1.1 MD11G1184700.v1.1
prunus_persica	Prupe.4G265200_v2.0.a1 Prupe.4G265200_v2.0.a1 Prupe.4G265200_v2.0.a1 Prupe.4G265300_v2.0.a1
pyrus_communis	pycom03g11990 pycom12g08810
rosa_chinensis	RchiOBHm_Chr5g0050541
rosa_laevigata	RLG00000034705
rosa_multiflora	Rmu_sc0004301.1_g000009
rosa_roxburghii	Rroxscaffold_1G00030350
rosa_rugosa	Rorug05G0261400
rosa_samantha	Rh5AG333300 Rh5BG343200 Rh5CG370800 Rh5DG355900
rosa_wichuraiana	Rw5G031480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	786, 1338
AarI	CACCTGC	1 cut(s)	1534
AasI	GACNNNNNNGTC	2 cut(s)	297, 2380
Acc16I	TGCGCA	1 cut(s)	1071
Acc36I	ACCTGC	1 cut(s)	1534
AccB1I	GGYRCC	1 cut(s)	955
AccB7I	CCANNNNNTGG	1 cut(s)	38
AccBSI	CCGCTC	1 cut(s)	1861
AciI	CCGC	5 cut(s)	118, 617, 859, 1861, 2295
AcoI	YGGCCR	1 cut(s)	2043
AcsI	RAATTY	5 cut(s)	600, 671, 876, 1408, 2280
AcuI	CTGAAG	2 cut(s)	1377, 2162
AcvI	CACGTG	1 cut(s)	1982
AfaI	GTAC	6 cut(s)	586, 645, 750, 1281, 2302, 2362
AfeI	AGCGCT	1 cut(s)	1664
AfiI	CCNNNNNNNGG	3 cut(s)	38, 185, 400
AflII	CTTAAG	1 cut(s)	314
AjiI	CACGTC	1 cut(s)	293
AjnI	CCWGG	3 cut(s)	37, 1576, 2045
Alw26I	GTCTC	4 cut(s)	317, 747, 833, 1496
AlwNI	CAGNNNCTG	1 cut(s)	944
Aor51HI	AGCGCT	1 cut(s)	1664
AoxI	GGCC	5 cut(s)	6, 67, 303, 476, 2043
ApoI	RAATTY	5 cut(s)	600, 671, 876, 1408, 2280
AseI	ATTAAT	1 cut(s)	813
Asp700I	GAANNNNTTC	3 cut(s)	1990, 2324, 2550
AspLEI	GCGC	9 cut(s)	30, 175, 382, 520, 825, 1072, 1520, 1665, 1866
AspS9I	GGNCC	4 cut(s)	68, 303, 450, 539
AsuC2I	CCSGG	1 cut(s)	681
AsuHPI	GGTGA	8 cut(s)	203, 301, 695, 716, 998, 1364, 1515, 2607
AsuII	TTCGAA	1 cut(s)	86
AsuNHI	GCTAGC	1 cut(s)	1826
AvaII	GGWCC	2 cut(s)	450, 539
BaeI	ACNNNNGTAYC	2 cut(s)	576, 609
BalI	TGGCCA	1 cut(s)	2045
BamHI	GGATCC	4 cut(s)	1370, 1573, 1643, 2332
BanI	GGYRCC	1 cut(s)	955
BbrPI	CACGTG	1 cut(s)	1982
BbsI	GAAGAC	5 cut(s)	49, 339, 356, 508, 1950
BceAI	ACGGC	1 cut(s)	846
BcgI	CGANNNNNNTGC	2 cut(s)	1647, 1681
BciT130I	CCWGG	3 cut(s)	39, 1578, 2047
BcnI	CCSGG	1 cut(s)	681
BcoDI	GTCTC	4 cut(s)	317, 747, 833, 1496
BfaI	CTAG	5 cut(s)	168, 521, 776, 1803, 1827
BfmI	CTRYAG	3 cut(s)	936, 1047, 2403
BfoI	RGCGCY	4 cut(s)	31, 383, 1666, 1867
BfrI	CTTAAG	1 cut(s)	314
BfuAI	ACCTGC	1 cut(s)	1534
BglII	AGATCT	1 cut(s)	1921
Bme1390I	CCNGG	4 cut(s)	39, 681, 1578, 2047
Bme18I	GGWCC	2 cut(s)	450, 539
BmgBI	CACGTC	1 cut(s)	293
BmgT120I	GGNCC	4 cut(s)	68, 303, 450, 539
BmiI	GGNNCC	8 cut(s)	451, 569, 957, 1372, 1465, 1575, 1645, 2334
BmrFI	CCNGG	4 cut(s)	39, 681, 1578, 2047
BmtI	GCTAGC	1 cut(s)	1830
BpiI	GAAGAC	5 cut(s)	49, 339, 356, 508, 1950
BplI	GAGNNNNNCTC	2 cut(s)	722, 754
BpmI	CTGGAG	5 cut(s)	60, 729, 1551, 1620, 1749
Bpu10I	CCTNAGC	1 cut(s)	849
Bpu14I	TTCGAA	1 cut(s)	86
BpuEI	CTTGAG	3 cut(s)	572, 1778, 2033
BpuMI	CCSGG	1 cut(s)	681
BsaAI	YACGTR	1 cut(s)	1982
BsaBI	GATNNNNATC	2 cut(s)	1125, 1200
BsaJI	CCNNGG	4 cut(s)	1577, 2168, 2459, 2621
BsaXI	ACNNNNNCTCC	2 cut(s)	2231, 2261
Bsc4I	CCNNNNNNNGG	3 cut(s)	38, 185, 400
Bse1I	ACTGG	3 cut(s)	746, 1878, 1974
Bse3DI	GCAATG	2 cut(s)	825, 1693
Bse8I	GATNNNNATC	2 cut(s)	1125, 1200
BseBI	CCWGG	3 cut(s)	39, 1578, 2047
BseDI	CCNNGG	4 cut(s)	1577, 2168, 2459, 2621
BseGI	GGATG	6 cut(s)	625, 930, 1006, 1369, 1582, 2464
BseJI	GATNNNNATC	2 cut(s)	1125, 1200
BseLI	CCNNNNNNNGG	3 cut(s)	38, 185, 400
BseMI	GCAATG	2 cut(s)	825, 1693
BseMII	CTCAG	5 cut(s)	312, 716, 840, 1389, 2549
BseNI	ACTGG	3 cut(s)	746, 1878, 1974
BseRI	GAGGAG	3 cut(s)	641, 2030, 2252
BseYI	CCCAGC	1 cut(s)	1035
BsgI	GTGCAG	1 cut(s)	748
BshFI	GGCC	5 cut(s)	8, 69, 305, 478, 2045
BshNI	GGYRCC	1 cut(s)	955
BsiSI	CCGG	1 cut(s)	681
BslFI	GGGAC	2 cut(s)	417, 1977
BslI	CCNNNNNNNGG	3 cut(s)	38, 185, 400
BsmAI	GTCTC	4 cut(s)	317, 747, 833, 1496
BsmBI	CGTCTC	2 cut(s)	747, 1496
BsmFI	GGGAC	2 cut(s)	417, 1977
BsnI	GGCC	5 cut(s)	8, 69, 305, 478, 2045
Bsp119I	TTCGAA	1 cut(s)	86
Bsp1407I	TGTACA	1 cut(s)	1279
Bsp19I	CCATGG	1 cut(s)	2621
BspACI	CCGC	5 cut(s)	118, 617, 859, 1861, 2295
BspANI	GGCC	5 cut(s)	8, 69, 305, 478, 2045
BspCNI	CTCAG	5 cut(s)	313, 717, 841, 1390, 2548
BspHI	TCATGA	1 cut(s)	2215
BspLI	GGNNCC	8 cut(s)	451, 569, 957, 1372, 1465, 1575, 1645, 2334
BspMAI	CTGCAG	2 cut(s)	940, 1051
BspMI	ACCTGC	1 cut(s)	1534
BspOI	GCTAGC	1 cut(s)	1830
BspQI	GCTCTTC	3 cut(s)	567, 832, 1731
BspT104I	TTCGAA	1 cut(s)	86
BspT107I	GGYRCC	1 cut(s)	955
BspTI	CTTAAG	1 cut(s)	314
BsrBI	CCGCTC	1 cut(s)	1861
BsrDI	GCAATG	2 cut(s)	825, 1693
BsrGI	TGTACA	1 cut(s)	1279
BsrI	ACTGG	3 cut(s)	746, 1878, 1974
BssECI	CCNNGG	4 cut(s)	1577, 2168, 2459, 2621
BssT1I	CCWWGG	2 cut(s)	2459, 2621
Bst2UI	CCWGG	3 cut(s)	39, 1578, 2047
Bst4CI	ACNGT	8 cut(s)	55, 274, 612, 1137, 1704, 1968, 2111, 2135
Bst6I	CTCTTC	3 cut(s)	567, 832, 1731
BstAFI	CTTAAG	1 cut(s)	314
BstAPI	GCANNNNNTGC	6 cut(s)	944, 1055, 1058, 1526, 2201, 2483
BstAUI	TGTACA	1 cut(s)	1279
BstBAI	YACGTR	1 cut(s)	1982
BstBI	TTCGAA	1 cut(s)	86
BstC8I	GCNNGC	7 cut(s)	516, 949, 1074, 1318, 1828, 1848, 2341
BstDEI	CTNAG	9 cut(s)	321, 725, 849, 1398, 1925, 1995, 2396, 2488, 2535
BstDSI	CCRYGG	1 cut(s)	2621
BstEII	GGTNACC	1 cut(s)	1223
BstF5I	GGATG	6 cut(s)	625, 930, 1006, 1369, 1582, 2464
BstH2I	RGCGCY	4 cut(s)	31, 383, 1666, 1867
BstHHI	GCGC	9 cut(s)	30, 175, 382, 520, 825, 1072, 1520, 1665, 1866
BstMAI	GTCTC	4 cut(s)	317, 747, 833, 1496
BstNI	CCWGG	3 cut(s)	39, 1578, 2047
BstNSI	RCATGY	3 cut(s)	368, 722, 1957
BstPI	GGTNACC	1 cut(s)	1223
BstSCI	CCNGG	4 cut(s)	37, 679, 1576, 2045
BstSFI	CTRYAG	3 cut(s)	936, 1047, 2403
BstV2I	GAAGAC	5 cut(s)	49, 339, 356, 508, 1950
BstX2I	RGATCY	6 cut(s)	1370, 1435, 1573, 1643, 1921, 2332
BstYI	RGATCY	6 cut(s)	1370, 1435, 1573, 1643, 1921, 2332
BsuRI	GGCC	5 cut(s)	8, 69, 305, 478, 2045
BtgI	CCRYGG	1 cut(s)	2621
BtrI	CACGTC	1 cut(s)	293
BtsCI	GGATG	6 cut(s)	625, 930, 1006, 1369, 1582, 2464
BtsI	GCAGTG	4 cut(s)	765, 1312, 1327, 1632
BtsIMutI	CAGTG	5 cut(s)	765, 1312, 1327, 1632, 1871
BveI	ACCTGC	1 cut(s)	1534
Cac8I	GCNNGC	7 cut(s)	516, 949, 1074, 1318, 1828, 1848, 2341
CaiI	CAGNNNCTG	1 cut(s)	944
CciI	TCATGA	1 cut(s)	2215
CfoI	GCGC	9 cut(s)	30, 175, 382, 520, 825, 1072, 1520, 1665, 1866
Cfr13I	GGNCC	4 cut(s)	68, 303, 450, 539
CseI	GACGC	2 cut(s)	698, 2538
Csp6I	GTAC	6 cut(s)	585, 644, 749, 1280, 2301, 2361
CviQI	GTAC	6 cut(s)	585, 644, 749, 1280, 2301, 2361
DdeI	CTNAG	9 cut(s)	321, 725, 849, 1398, 1925, 1995, 2396, 2488, 2535
DraI	TTTAAA	2 cut(s)	157, 2568
DrdI	GACNNNNNNGTC	2 cut(s)	297, 2380
DseDI	GACNNNNNNGTC	2 cut(s)	297, 2380
EaeI	YGGCCR	1 cut(s)	2043
Eam1104I	CTCTTC	3 cut(s)	567, 832, 1731
EarI	CTCTTC	3 cut(s)	567, 832, 1731
Eco130I	CCWWGG	2 cut(s)	2459, 2621
Eco147I	AGGCCT	1 cut(s)	478
Eco47I	GGWCC	2 cut(s)	450, 539
Eco47III	AGCGCT	1 cut(s)	1664
Eco57I	CTGAAG	2 cut(s)	1377, 2162
Eco72I	CACGTG	1 cut(s)	1982
Eco91I	GGTNACC	1 cut(s)	1223
EcoO109I	RGGNCCY	2 cut(s)	450, 539
EcoO65I	GGTNACC	1 cut(s)	1223
EcoRII	CCWGG	3 cut(s)	37, 1576, 2045
EcoT14I	CCWWGG	2 cut(s)	2459, 2621
EcoT22I	ATGCAT	2 cut(s)	894, 2371
ErhI	CCWWGG	2 cut(s)	2459, 2621
Esp3I	CGTCTC	2 cut(s)	747, 1496
FaqI	GGGAC	2 cut(s)	417, 1977
FokI	GGATG	6 cut(s)	632, 937, 1013, 1376, 1569, 2451
FspBI	CTAG	5 cut(s)	168, 521, 776, 1803, 1827
FspI	TGCGCA	1 cut(s)	1071
GlaI	GCGC	9 cut(s)	29, 174, 381, 519, 824, 1071, 1519, 1664, 1865
GsaI	CCCAGC	1 cut(s)	1039
GsuI	CTGGAG	5 cut(s)	60, 729, 1551, 1620, 1749
HaeII	RGCGCY	4 cut(s)	31, 383, 1666, 1867
HaeIII	GGCC	5 cut(s)	8, 69, 305, 478, 2045
HapII	CCGG	1 cut(s)	681
HgaI	GACGC	2 cut(s)	698, 2538
HhaI	GCGC	9 cut(s)	30, 175, 382, 520, 825, 1072, 1520, 1665, 1866
Hin6I	GCGC	9 cut(s)	28, 173, 380, 518, 823, 1070, 1518, 1663, 1864
HinP1I	GCGC	9 cut(s)	28, 173, 380, 518, 823, 1070, 1518, 1663, 1864
HindIII	AAGCTT	1 cut(s)	780
HpaII	CCGG	1 cut(s)	681
HphI	GGTGA	8 cut(s)	203, 301, 695, 716, 998, 1364, 1515, 2607
Hpy166II	GTNNAC	2 cut(s)	1280, 1979
Hpy8I	GTNNAC	2 cut(s)	1280, 1979
HpyAV	CCTTC	6 cut(s)	316, 440, 463, 552, 590, 1833
HpyCH4III	ACNGT	8 cut(s)	55, 274, 612, 1137, 1704, 1968, 2111, 2135
HpyCH4IV	ACGT	4 cut(s)	292, 637, 1884, 1981
HpyF3I	CTNAG	9 cut(s)	321, 725, 849, 1398, 1925, 1995, 2396, 2488, 2535
HpySE526I	ACGT	4 cut(s)	292, 637, 1884, 1981
HspAI	GCGC	9 cut(s)	28, 173, 380, 518, 823, 1070, 1518, 1663, 1864
LguI	GCTCTTC	3 cut(s)	567, 832, 1731
MaeI	CTAG	5 cut(s)	168, 521, 776, 1803, 1827
MaeII	ACGT	4 cut(s)	292, 637, 1884, 1981
MaeIII	GTNAC	4 cut(s)	1223, 1322, 1636, 2129
MbiI	CCGCTC	1 cut(s)	1861
MflI	RGATCY	6 cut(s)	1370, 1435, 1573, 1643, 1921, 2332
MlsI	TGGCCA	1 cut(s)	2045
MluNI	TGGCCA	1 cut(s)	2045
MlyI	GAGTC	2 cut(s)	922, 2588
MmeI	TCCRAC	3 cut(s)	478, 978, 1348
Mox20I	TGGCCA	1 cut(s)	2045
Mph1103I	ATGCAT	2 cut(s)	894, 2371
MroXI	GAANNNNTTC	3 cut(s)	1990, 2324, 2550
MscI	TGGCCA	1 cut(s)	2045
MseI	TTAA	7 cut(s)	156, 315, 483, 813, 2085, 2498, 2567
MslI	CAYNNNNRTG	2 cut(s)	912, 2620
Msp20I	TGGCCA	1 cut(s)	2045
MspA1I	CMGCKG	5 cut(s)	617, 1151, 1397, 2339, 2539
MspCI	CTTAAG	1 cut(s)	314
MspI	CCGG	1 cut(s)	681
MspR9I	CCNGG	4 cut(s)	39, 681, 1578, 2047
MvaI	CCWGG	3 cut(s)	39, 1578, 2047
NciI	CCSGG	1 cut(s)	681
NcoI	CCATGG	1 cut(s)	2621
NheI	GCTAGC	1 cut(s)	1826
NlaIV	GGNNCC	8 cut(s)	451, 569, 957, 1372, 1465, 1575, 1645, 2334
NmeAIII	GCCGAG	1 cut(s)	1646
NmuCI	GTSAC	2 cut(s)	1322, 2129
NsbI	TGCGCA	1 cut(s)	1071
NsiI	ATGCAT	2 cut(s)	894, 2371
NspI	RCATGY	3 cut(s)	368, 722, 1957
NspV	TTCGAA	1 cut(s)	86
PagI	TCATGA	1 cut(s)	2215
PaqCI	CACCTGC	1 cut(s)	1534
PceI	AGGCCT	1 cut(s)	478
PciSI	GCTCTTC	3 cut(s)	567, 832, 1731
PdmI	GAANNNNTTC	3 cut(s)	1990, 2324, 2550
PflFI	GACNNNGTC	1 cut(s)	1702
PflMI	CCANNNNNTGG	1 cut(s)	38
PleI	GAGTC	2 cut(s)	922, 2588
PmaCI	CACGTG	1 cut(s)	1982
PmlI	CACGTG	1 cut(s)	1982
PpsI	GAGTC	2 cut(s)	922, 2588
Ppu21I	YACGTR	1 cut(s)	1982
PpuMI	RGGWCCY	2 cut(s)	450, 539
PshBI	ATTAAT	1 cut(s)	813
PsiI	TTATAA	2 cut(s)	786, 1338
Psp5II	RGGWCCY	2 cut(s)	450, 539
Psp6I	CCWGG	3 cut(s)	37, 1576, 2045
PspCI	CACGTG	1 cut(s)	1982
PspEI	GGTNACC	1 cut(s)	1223
PspFI	CCCAGC	1 cut(s)	1035
PspGI	CCWGG	3 cut(s)	37, 1576, 2045
PspN4I	GGNNCC	8 cut(s)	451, 569, 957, 1372, 1465, 1575, 1645, 2334
PspPI	GGNCC	4 cut(s)	68, 303, 450, 539
PspPPI	RGGWCCY	2 cut(s)	450, 539
PsrI	GAACNNNNNNTAC	2 cut(s)	627, 659
PstI	CTGCAG	2 cut(s)	940, 1051
PstNI	CAGNNNCTG	1 cut(s)	944
PsuI	RGATCY	6 cut(s)	1370, 1435, 1573, 1643, 1921, 2332
PsyI	GACNNNGTC	1 cut(s)	1702
PvuII	CAGCTG	4 cut(s)	1151, 1397, 2339, 2539
RsaI	GTAC	6 cut(s)	586, 645, 750, 1281, 2302, 2362
RsaNI	GTAC	6 cut(s)	585, 644, 749, 1280, 2301, 2361
RseI	CAYNNNNRTG	2 cut(s)	912, 2620
SapI	GCTCTTC	3 cut(s)	567, 832, 1731
SaqAI	TTAA	7 cut(s)	156, 315, 483, 813, 2085, 2498, 2567
Sau96I	GGNCC	4 cut(s)	68, 303, 450, 539
SchI	GAGTC	2 cut(s)	922, 2588
ScrFI	CCNGG	4 cut(s)	39, 681, 1578, 2047
SfcI	CTRYAG	3 cut(s)	936, 1047, 2403
SfuI	TTCGAA	1 cut(s)	86
SinI	GGWCC	2 cut(s)	450, 539
SmiI	ATTTAAAT	1 cut(s)	2568
SmiMI	CAYNNNNRTG	2 cut(s)	912, 2620
SmlI	CTYRAG	4 cut(s)	314, 551, 1757, 2012
SmoI	CTYRAG	4 cut(s)	314, 551, 1757, 2012
SseBI	AGGCCT	1 cut(s)	478
SsiI	CCGC	5 cut(s)	118, 617, 859, 1861, 2295
SspI	AATATT	1 cut(s)	834
SspMI	CTAG	5 cut(s)	168, 521, 776, 1803, 1827
StuI	AGGCCT	1 cut(s)	478
StyD4I	CCNGG	4 cut(s)	37, 679, 1576, 2045
StyI	CCWWGG	2 cut(s)	2459, 2621
SwaI	ATTTAAAT	1 cut(s)	2568
TaaI	ACNGT	8 cut(s)	55, 274, 612, 1137, 1704, 1968, 2111, 2135
TaiI	ACGT	4 cut(s)	295, 640, 1887, 1984
TaqI	TCGA	4 cut(s)	86, 573, 796, 2372
TatI	WGTACW	1 cut(s)	1279
TauI	GCSGC	1 cut(s)	1864
Tru1I	TTAA	7 cut(s)	156, 315, 483, 813, 2085, 2498, 2567
Tru9I	TTAA	7 cut(s)	156, 315, 483, 813, 2085, 2498, 2567
TscAI	CASTG	5 cut(s)	772, 1312, 1327, 1632, 1878
TseFI	GTSAC	2 cut(s)	1322, 2129
Tsp45I	GTSAC	2 cut(s)	1322, 2129
TspDTI	ATGAA	9 cut(s)	67, 669, 1119, 1137, 1212, 1257, 2232, 2317, 2543
TspGWI	ACGGA	2 cut(s)	151, 1520
TspRI	CASTG	5 cut(s)	772, 1312, 1327, 1632, 1878
Tth111I	GACNNNGTC	1 cut(s)	1702
Van91I	CCANNNNNTGG	1 cut(s)	38
Vha464I	CTTAAG	1 cut(s)	314
VpaK11BI	GGWCC	2 cut(s)	450, 539
VspI	ATTAAT	1 cut(s)	813
XapI	RAATTY	5 cut(s)	600, 671, 876, 1408, 2280
XceI	RCATGY	3 cut(s)	368, 722, 1957
XmnI	GAANNNNTTC	3 cut(s)	1990, 2324, 2550
XspI	CTAG	5 cut(s)	168, 521, 776, 1803, 1827
Zsp2I	ATGCAT	2 cut(s)	894, 2371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.