Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0006813

Physical Location & Seq

Genomic Coordinates Forward (+)

12257091 .. 12266801

Gene Structure 9711 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g11990.15

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGGGACACAATGGGATTTTCCGTAATGACACGAATGATACACTTGAAGGGTCCTTCCATCAATGGAGAGATAAAAGGCCTGTTAAATCTTTGGTTGTTGGGAGACCTATTCTTCTTGCGCTAGAAGATATTGATGGAGGTCCTTCCTTCCTGGAGAAAGCTCTTCGGTTCCTGGAAAAGTTTGGTACTAAAGTTGAAGGAATATTGAGACAGTCTGCGGATGTTGAGGAGGTAGAACGTAGAGTACAAGAATATGAGCAAGGCAAGACTGAATTTAATCCGGATGAGGATGCTCATGTTGTTGGCGATTGTGTCAAGCATGTTCTGAGAGAGCTGCCCTCTTCTCCAGTACCAGCATCTTGCTGCACTGCATTGCTAGAGGCTTATAAAATTGATCGAAAGGAAGCTCGGGTTAGTGCAATGCGCTCTTCAATATTGGAGACATTTCCTGAGCCAAATCGCCGTTTATTACAGAGAATTTTGAAGATGATGCATGTCATATCTTCTCACTCTGATGAGAATCGGATGACTCCATCTGCAGTTGCTGCATGCATGGCACCCTTGCTCTTACGCCCTCTATTAGCTGGTGAATGTGAGCTGGATGATGACTTTGATCTTAATGGTGATAATTCTGCCCAGCTTATTGCTGCTGCAAATGCTGCAAATAATGCTCAAGCTATCATCACAACTCTTTTGGAGGAGTATGAAAACGTTTTTGATGATGAAAATCTTATAAGGTGTTCCATCTCCGCTGATTCTCGAATTGAGAATAGTGGAAGTGAAGATTCATCTGACGATGAAAATCTTGATCTGAAAGACAACGGTTACCATGATGCAGAAAATGAAGTTGATCCGGAAACAGATGATGATCCGGATCGAGTTCATAGTGGAAAGTTGAGTGAAAGCAGTGGTTATGCTGGCAGTGACCTCTATGATTATAAGGCATTTGGGGTTGATGATTCAGATGTTGGATCACCTAAAGGAAATCATGCGTCAGCTGAGAGTTCAAGTTCACATGTTCCTCAAACCATTAGAGATCCAAATGTTGAAGTCGTGGAAAGAGGAAGCAAACCAATTAAAGAAAATGAAAATTTAATTAGTGAGACAGAAACACCTAGTGCATCACCTGCTGGAGATTCTTACAGATCAATGGGAGAGATTCTGTCAGCAATGGATCCAGGGCATCCTTTACCAGTGTCTGGACTTGAATCAGGAACTGTGAAGAAAGTGGCCAAAGTTACAGGCTCCCATCATAACACAAAGCGATCGGCATTTTGGGGAAGAAACAATGCAAGAAAGACACCGTCAGTGGAATCAGTCGATTCTTCTGGAGAGGAAGAGCTTTCAATTCAGAGGCTTGAGATTGCAAAAAACGACTTGCAGCAGAGGATTGCGAAAGAGGCTAGAGGAAATGCAATTTTACAAGCTAGTTTGGAGAGAAGGAAGCAAGCTTTACATGAGCGGCGCTTGGCACTGGAACAAGATGTTTCAAGATTGCAAGAGCAGCTACAAGCTGAGCGAGATCTTAGAGCAGCATTAGAGGTTGGTTTGAGCATGTCTTCTGGACAGTTGGCCAGTTCATGTGGCGTGGATTCTAAGACACGGGCTGAGCTTGAGGAGATAGCCCTTGCTGAAGCAGATGTGGCCAGGTTGAAGCAGAAAGTTGCAGAACTTCACCATCAACTTAATCAACAGCGACAGCATCATTATGGTTCTCTCTCTGATGCTTGTGACCGTTACCAAAATGGCCAAAATAATAATTCCCAACAGAGGTTTCTACAGCAAGATTTTGATGCAACCCTTGCCTTCTGTAATCATGAAAGGAAACAAAGGAATGAGGAGAGTTTGCTGGGGGCAGATTGGAGGACTATCAAAGGCCAAATTTTAGCATCTGCCAGCAGTACAAGGCAGCCTTCTAGGAAGCAATTCATGGATCCGGCTAGCAGAAGTGAATCAAAAAATACTGATGCATCGACAAGTTTGTCTGTTGATGAGCTTTCTGCTGTTGATTCTGCTTCCATGCCATCGACTTCAAGAGCACCAGAGGCGGTGGATTATCCAAGGCATCCATCAACAGCATCTTCTGCCTTGGTAGAACTAACAACTCGCCTTGATTTCTTCAAGGAAAGACGTTCCCAGCTGATGGAACAGCTTCATAATCTTGATTTAAATTATGGCACGACATCTTTGCAAGACTCAGTTTATAGACCATCATCTCCACCGTGGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0000911 GO:0000919 GO:0003674 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006996 GO:0007049 GO:0008047 GO:0008150 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009832 GO:0009920 GO:0009987 GO:0016020 GO:0016043 GO:0022402 GO:0022607 GO:0030234 GO:0030695 GO:0031976 GO:0031984 GO:0032506 GO:0034357 GO:0042546 GO:0042651 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043547 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0050790 GO:0051301 GO:0051336 GO:0051345 GO:0055035 GO:0060589 GO:0061640 GO:0065007 GO:0065009 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0098772 GO:0140014 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lzipper-MIP1 PH RhoGAP

Protein Analysis

744

Amino Acids

82.22

Weight (kDa)

5.03

Isoelectric Point (pI)

55.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19390 AT5G19390 AT5G19390 AT5G19390
fragaria_vesca	FvH4_3g27830 FvH4_3g27830 FvH4_3g27830 FvH4_3g27830
malus_domestica	MD03G1165400.v1.1 MD11G1184700.v1.1
prunus_persica	Prupe.4G265200_v2.0.a1 Prupe.4G265200_v2.0.a1 Prupe.4G265200_v2.0.a1 Prupe.4G265300_v2.0.a1
pyrus_communis	pycom03g11990 pycom12g08810
rosa_chinensis	RchiOBHm_Chr5g0050541
rosa_laevigata	RLG00000034705
rosa_multiflora	Rmu_sc0004301.1_g000009
rosa_roxburghii	Rroxscaffold_1G00030350
rosa_rugosa	Rorug05G0261400
rosa_samantha	Rh5AG333300 Rh5BG343200 Rh5CG370800 Rh5DG355900
rosa_wichuraiana	Rw5G031480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	387, 734, 939
AarI	CACCTGC	1 cut(s)	1135
AasI	GACNNNNNNGTC	1 cut(s)	1981
Acc36I	ACCTGC	1 cut(s)	1135
AccB1I	GGYRCC	1 cut(s)	556
AccB7I	CCANNNNNTGG	2 cut(s)	1199, 2143
AccBSI	CCGCTC	1 cut(s)	1462
AccIII	TCCGGA	3 cut(s)	280, 853, 871
AciI	CCGC	4 cut(s)	218, 750, 1462, 2048
AclI	AACGTT	1 cut(s)	711
AclWI	GGATC	9 cut(s)	845, 863, 882, 979, 1031, 1169, 1182, 1928, 1941
AcoI	YGGCCR	4 cut(s)	1230, 1572, 1644, 1747
AcsI	RAATTY	4 cut(s)	272, 477, 1090, 1881
AcuI	CTGAAG	1 cut(s)	1653
AdeI	CACNNNGTG	1 cut(s)	1118
AfaI	GTAC	4 cut(s)	187, 246, 351, 1903
AfiI	CCNNNNNNNGG	3 cut(s)	1199, 1770, 2143
AflIII	ACRYGT	1 cut(s)	1015
AjnI	CCWGG	4 cut(s)	150, 171, 1177, 1646
AjuI	GAANNNNNNNTTGG	2 cut(s)	1758, 1790
Alw21I	GWGCWC	1 cut(s)	2041
Alw26I	GTCTC	4 cut(s)	97, 202, 434, 1097
AlwI	GGATC	9 cut(s)	845, 863, 882, 979, 1031, 1169, 1182, 1928, 1941
AlwNI	CAGNNNCTG	3 cut(s)	545, 1199, 1217
Ama87I	CYCGRG	1 cut(s)	408
Aor13HI	TCCGGA	3 cut(s)	280, 853, 871
AoxI	GGCC	6 cut(s)	77, 1230, 1572, 1644, 1747, 1876
ApoI	RAATTY	4 cut(s)	272, 477, 1090, 1881
Asp700I	GAANNNNTTC	2 cut(s)	1925, 2151
AspLEI	GCGC	3 cut(s)	121, 426, 1467
AspS9I	GGNCC	2 cut(s)	51, 140
AsuHPI	GGTGA	5 cut(s)	599, 635, 966, 1116, 1667
AsuNHI	GCTAGC	1 cut(s)	1940
AvaI	CYCGRG	1 cut(s)	408
AvaII	GGWCC	2 cut(s)	51, 140
BaeI	ACNNNNGTAYC	2 cut(s)	177, 210
BalI	TGGCCA	4 cut(s)	1232, 1574, 1646, 1749
BamHI	GGATCC	2 cut(s)	1174, 1933
BanI	GGYRCC	1 cut(s)	556
BbsI	GAAGAC	1 cut(s)	1551
Bbv12I	GWGCWC	1 cut(s)	2041
BceAI	ACGGC	1 cut(s)	447
BcgI	CGANNNNNNTGC	2 cut(s)	2170, 2204
BciT130I	CCWGG	4 cut(s)	152, 173, 1179, 1648
BcoDI	GTCTC	4 cut(s)	97, 202, 434, 1097
BfaI	CTAG	7 cut(s)	122, 377, 1116, 1404, 1428, 1917, 1941
BfmI	CTRYAG	2 cut(s)	537, 1778
BfoI	RGCGCY	1 cut(s)	1468
BfuAI	ACCTGC	1 cut(s)	1135
BglII	AGATCT	1 cut(s)	1522
BlpI	GCTNAGC	2 cut(s)	1515, 1608
Bme1390I	CCNGG	4 cut(s)	152, 173, 1179, 1648
Bme18I	GGWCC	2 cut(s)	51, 140
BmeT110I	CYCGRG	1 cut(s)	408
BmgT120I	GGNCC	2 cut(s)	51, 140
BmiI	GGNNCC	6 cut(s)	52, 170, 558, 1176, 1246, 1935
BmrFI	CCNGG	4 cut(s)	152, 173, 1179, 1648
BmtI	GCTAGC	1 cut(s)	1944
BpiI	GAAGAC	1 cut(s)	1551
BplI	GAGNNNNNCTC	2 cut(s)	323, 355
BpmI	CTGGAG	4 cut(s)	173, 330, 1152, 1350
Bpu10I	CCTNAGC	1 cut(s)	450
Bpu1102I	GCTNAGC	2 cut(s)	1515, 1608
BpuEI	CTTGAG	3 cut(s)	657, 1379, 1634
BsaBI	GATNNNNATC	5 cut(s)	519, 726, 801, 867, 873
BsaI	GGTCTC	1 cut(s)	97
BsaJI	CCNNGG	4 cut(s)	1178, 2060, 2088, 2222
BsaWI	WCCGGW	3 cut(s)	280, 853, 871
Bsc4I	CCNNNNNNNGG	3 cut(s)	1199, 1770, 2143
Bse1I	ACTGG	4 cut(s)	347, 1193, 1479, 1575
Bse3DI	GCAATG	3 cut(s)	371, 426, 1176
Bse8I	GATNNNNATC	5 cut(s)	519, 726, 801, 867, 873
BseAI	TCCGGA	3 cut(s)	280, 853, 871
BseBI	CCWGG	4 cut(s)	152, 173, 1179, 1648
BseDI	CCNNGG	4 cut(s)	1178, 2060, 2088, 2222
BseGI	GGATG	7 cut(s)	226, 289, 295, 531, 607, 1183, 2065
BseJI	GATNNNNATC	5 cut(s)	519, 726, 801, 867, 873
BseLI	CCNNNNNNNGG	3 cut(s)	1199, 1770, 2143
BseMI	GCAATG	3 cut(s)	371, 426, 1176
BseMII	CTCAG	6 cut(s)	317, 441, 990, 1506, 1599, 2211
BseNI	ACTGG	4 cut(s)	347, 1193, 1479, 1575
BseRI	GAGGAG	4 cut(s)	242, 713, 1631, 1853
BseYI	CCCAGC	3 cut(s)	636, 1849, 2136
BsgI	GTGCAG	1 cut(s)	349
Bsh1285I	CGRYCG	1 cut(s)	1268
BshFI	GGCC	6 cut(s)	79, 1232, 1574, 1646, 1749, 1878
BshNI	GGYRCC	1 cut(s)	556
BsiEI	CGRYCG	1 cut(s)	1268
BsiHKAI	GWGCWC	1 cut(s)	2041
BsiHKCI	CYCGRG	1 cut(s)	408
BsiSI	CCGG	4 cut(s)	281, 854, 872, 1937
BslFI	GGGAC	1 cut(s)	18
BslI	CCNNNNNNNGG	3 cut(s)	1199, 1770, 2143
BsmAI	GTCTC	4 cut(s)	97, 202, 434, 1097
BsmFI	GGGAC	1 cut(s)	18
BsnI	GGCC	6 cut(s)	79, 1232, 1574, 1646, 1749, 1878
Bso31I	GGTCTC	1 cut(s)	97
BsoBI	CYCGRG	1 cut(s)	408
Bsp1286I	GDGCHC	1 cut(s)	2041
Bsp13I	TCCGGA	3 cut(s)	280, 853, 871
Bsp1720I	GCTNAGC	2 cut(s)	1515, 1608
BspACI	CCGC	4 cut(s)	218, 750, 1462, 2048
BspANI	GGCC	6 cut(s)	79, 1232, 1574, 1646, 1749, 1878
BspCNI	CTCAG	6 cut(s)	318, 442, 991, 1507, 1600, 2210
BspEI	TCCGGA	3 cut(s)	280, 853, 871
BspHI	TCATGA	1 cut(s)	1816
BspLI	GGNNCC	6 cut(s)	52, 170, 558, 1176, 1246, 1935
BspMAI	CTGCAG	1 cut(s)	541
BspMI	ACCTGC	1 cut(s)	1135
BspOI	GCTAGC	1 cut(s)	1944
BspPI	GGATC	9 cut(s)	845, 863, 882, 979, 1031, 1169, 1182, 1928, 1941
BspQI	GCTCTTC	3 cut(s)	168, 433, 1332
BspT107I	GGYRCC	1 cut(s)	556
BspTNI	GGTCTC	1 cut(s)	97
BsrBI	CCGCTC	1 cut(s)	1462
BsrDI	GCAATG	3 cut(s)	371, 426, 1176
BsrI	ACTGG	4 cut(s)	347, 1193, 1479, 1575
BssECI	CCNNGG	4 cut(s)	1178, 2060, 2088, 2222
BssT1I	CCWWGG	2 cut(s)	2060, 2088
Bst2UI	CCWGG	4 cut(s)	152, 173, 1179, 1648
Bst4CI	ACNGT	7 cut(s)	213, 824, 1219, 1305, 1569, 1736, 2223
Bst6I	CTCTTC	4 cut(s)	168, 346, 433, 1332
BstAPI	GCANNNNNTGC	6 cut(s)	545, 659, 668, 1127, 1802, 2084
BstC8I	GCNNGC	5 cut(s)	550, 919, 1449, 1897, 1942
BstDEI	CTNAG	8 cut(s)	326, 450, 999, 1515, 1526, 1596, 1608, 2197
BstDSI	CCRYGG	1 cut(s)	2222
BstEII	GGTNACC	1 cut(s)	824
BstF5I	GGATG	7 cut(s)	226, 289, 295, 531, 607, 1183, 2065
BstH2I	RGCGCY	1 cut(s)	1468
BstHHI	GCGC	3 cut(s)	121, 426, 1467
BstMAI	GTCTC	4 cut(s)	97, 202, 434, 1097
BstMCI	CGRYCG	1 cut(s)	1268
BstNI	CCWGG	4 cut(s)	152, 173, 1179, 1648
BstNSI	RCATGY	5 cut(s)	323, 497, 552, 1019, 1558
BstPI	GGTNACC	1 cut(s)	824
BstSCI	CCNGG	4 cut(s)	150, 171, 1177, 1646
BstSFI	CTRYAG	2 cut(s)	537, 1778
BstV2I	GAAGAC	1 cut(s)	1551
BstX2I	RGATCY	4 cut(s)	1036, 1174, 1522, 1933
BstYI	RGATCY	4 cut(s)	1036, 1174, 1522, 1933
BsuRI	GGCC	6 cut(s)	79, 1232, 1574, 1646, 1749, 1878
BtgI	CCRYGG	1 cut(s)	2222
BtsCI	GGATG	7 cut(s)	226, 289, 295, 531, 607, 1183, 2065
BtsI	GCAGTG	3 cut(s)	366, 913, 928
BtsIMutI	CAGTG	6 cut(s)	366, 913, 928, 1200, 1314, 1472
BveI	ACCTGC	1 cut(s)	1135
Cac8I	GCNNGC	5 cut(s)	550, 919, 1449, 1897, 1942
CaiI	CAGNNNCTG	3 cut(s)	545, 1199, 1217
CciI	TCATGA	1 cut(s)	1816
CfoI	GCGC	3 cut(s)	121, 426, 1467
Cfr13I	GGNCC	2 cut(s)	51, 140
CseI	GACGC	1 cut(s)	981
Csp6I	GTAC	4 cut(s)	186, 245, 350, 1902
CviQI	GTAC	4 cut(s)	186, 245, 350, 1902
DdeI	CTNAG	8 cut(s)	326, 450, 999, 1515, 1526, 1596, 1608, 2197
DraI	TTTAAA	1 cut(s)	2169
DraIII	CACNNNGTG	1 cut(s)	1118
DrdI	GACNNNNNNGTC	1 cut(s)	1981
DseDI	GACNNNNNNGTC	1 cut(s)	1981
EaeI	YGGCCR	4 cut(s)	1230, 1572, 1644, 1747
Eam1104I	CTCTTC	4 cut(s)	168, 346, 433, 1332
EarI	CTCTTC	4 cut(s)	168, 346, 433, 1332
Eco130I	CCWWGG	2 cut(s)	2060, 2088
Eco147I	AGGCCT	1 cut(s)	79
Eco31I	GGTCTC	1 cut(s)	97
Eco47I	GGWCC	2 cut(s)	51, 140
Eco57I	CTGAAG	1 cut(s)	1653
Eco88I	CYCGRG	1 cut(s)	408
Eco91I	GGTNACC	1 cut(s)	824
EcoO109I	RGGNCCY	2 cut(s)	51, 140
EcoO65I	GGTNACC	1 cut(s)	824
EcoRII	CCWGG	4 cut(s)	150, 171, 1177, 1646
EcoT14I	CCWWGG	2 cut(s)	2060, 2088
EcoT22I	ATGCAT	3 cut(s)	495, 554, 1972
ErhI	CCWWGG	2 cut(s)	2060, 2088
FalI	AAGNNNNNCTT	2 cut(s)	1897, 1929
FaqI	GGGAC	1 cut(s)	18
FokI	GGATG	7 cut(s)	233, 296, 302, 538, 614, 1170, 2052
FspBI	CTAG	7 cut(s)	122, 377, 1116, 1404, 1428, 1917, 1941
GlaI	GCGC	3 cut(s)	120, 425, 1466
GsaI	CCCAGC	3 cut(s)	640, 1853, 2140
GsuI	CTGGAG	4 cut(s)	173, 330, 1152, 1350
HaeII	RGCGCY	1 cut(s)	1468
HaeIII	GGCC	6 cut(s)	79, 1232, 1574, 1646, 1749, 1878
HapII	CCGG	4 cut(s)	281, 854, 872, 1937
HgaI	GACGC	1 cut(s)	981
HhaI	GCGC	3 cut(s)	121, 426, 1467
Hin6I	GCGC	3 cut(s)	119, 424, 1465
HinP1I	GCGC	3 cut(s)	119, 424, 1465
HindIII	AAGCTT	1 cut(s)	1449
HpaII	CCGG	4 cut(s)	281, 854, 872, 1937
HphI	GGTGA	5 cut(s)	599, 635, 966, 1116, 1667
Hpy166II	GTNNAC	1 cut(s)	1013
Hpy188I	TCNGA	8 cut(s)	327, 514, 525, 793, 813, 964, 1353, 1723
Hpy8I	GTNNAC	1 cut(s)	1013
HpyAV	CCTTC	8 cut(s)	41, 64, 153, 157, 191, 1434, 1816, 1923
HpyCH4III	ACNGT	7 cut(s)	213, 824, 1219, 1305, 1569, 1736, 2223
HpyCH4IV	ACGT	3 cut(s)	238, 711, 2131
HpyF3I	CTNAG	8 cut(s)	326, 450, 999, 1515, 1526, 1596, 1608, 2197
HpySE526I	ACGT	3 cut(s)	238, 711, 2131
HspAI	GCGC	3 cut(s)	119, 424, 1465
Kpn2I	TCCGGA	3 cut(s)	280, 853, 871
LguI	GCTCTTC	3 cut(s)	168, 433, 1332
LmnI	GCTCC	1 cut(s)	1250
MaeI	CTAG	7 cut(s)	122, 377, 1116, 1404, 1428, 1917, 1941
MaeII	ACGT	3 cut(s)	238, 711, 2131
MaeIII	GTNAC	5 cut(s)	824, 923, 1237, 1730, 1736
MbiI	CCGCTC	1 cut(s)	1462
MflI	RGATCY	4 cut(s)	1036, 1174, 1522, 1933
MhlI	GDGCHC	1 cut(s)	2041
MlsI	TGGCCA	4 cut(s)	1232, 1574, 1646, 1749
MluNI	TGGCCA	4 cut(s)	1232, 1574, 1646, 1749
MlyI	GAGTC	2 cut(s)	523, 2189
MmeI	TCCRAC	1 cut(s)	949
Mox20I	TGGCCA	4 cut(s)	1232, 1574, 1646, 1749
Mph1103I	ATGCAT	3 cut(s)	495, 554, 1972
MroI	TCCGGA	3 cut(s)	280, 853, 871
MroXI	GAANNNNTTC	2 cut(s)	1925, 2151
MscI	TGGCCA	4 cut(s)	1232, 1574, 1646, 1749
MseI	TTAA	7 cut(s)	84, 276, 618, 1077, 1094, 1686, 2168
MslI	CAYNNNNRTG	2 cut(s)	513, 1707
Msp20I	TGGCCA	4 cut(s)	1232, 1574, 1646, 1749
MspA1I	CMGCKG	3 cut(s)	752, 998, 2140
MspI	CCGG	4 cut(s)	281, 854, 872, 1937
MspR9I	CCNGG	4 cut(s)	152, 173, 1179, 1648
MvaI	CCWGG	4 cut(s)	152, 173, 1179, 1648
NheI	GCTAGC	1 cut(s)	1940
NlaIV	GGNNCC	6 cut(s)	52, 170, 558, 1176, 1246, 1935
NmuCI	GTSAC	2 cut(s)	923, 1730
NsiI	ATGCAT	3 cut(s)	495, 554, 1972
NspI	RCATGY	5 cut(s)	323, 497, 552, 1019, 1558
PaeI	GCATGC	1 cut(s)	552
PagI	TCATGA	1 cut(s)	1816
PaqCI	CACCTGC	1 cut(s)	1135
PceI	AGGCCT	1 cut(s)	79
PciI	ACATGT	1 cut(s)	1015
PciSI	GCTCTTC	3 cut(s)	168, 433, 1332
PdmI	GAANNNNTTC	2 cut(s)	1925, 2151
PflFI	GACNNNGTC	1 cut(s)	1303
PflMI	CCANNNNNTGG	2 cut(s)	1199, 2143
PfoI	TCCNGGA	2 cut(s)	150, 171
Ple19I	CGATCG	1 cut(s)	1268
PleI	GAGTC	2 cut(s)	523, 2189
PpsI	GAGTC	2 cut(s)	523, 2189
PpuMI	RGGWCCY	2 cut(s)	51, 140
PscI	ACATGT	1 cut(s)	1015
PsiI	TTATAA	3 cut(s)	387, 734, 939
Psp1406I	AACGTT	1 cut(s)	711
Psp5II	RGGWCCY	2 cut(s)	51, 140
Psp6I	CCWGG	4 cut(s)	150, 171, 1177, 1646
PspEI	GGTNACC	1 cut(s)	824
PspFI	CCCAGC	3 cut(s)	636, 1849, 2136
PspGI	CCWGG	4 cut(s)	150, 171, 1177, 1646
PspN4I	GGNNCC	6 cut(s)	52, 170, 558, 1176, 1246, 1935
PspPI	GGNCC	2 cut(s)	51, 140
PspPPI	RGGWCCY	2 cut(s)	51, 140
PsrI	GAACNNNNNNTAC	2 cut(s)	228, 260
PstI	CTGCAG	1 cut(s)	541
PstNI	CAGNNNCTG	3 cut(s)	545, 1199, 1217
PsuI	RGATCY	4 cut(s)	1036, 1174, 1522, 1933
PsyI	GACNNNGTC	1 cut(s)	1303
PvuI	CGATCG	1 cut(s)	1268
PvuII	CAGCTG	2 cut(s)	998, 2140
RsaI	GTAC	4 cut(s)	187, 246, 351, 1903
RsaNI	GTAC	4 cut(s)	186, 245, 350, 1902
RseI	CAYNNNNRTG	2 cut(s)	513, 1707
SapI	GCTCTTC	3 cut(s)	168, 433, 1332
SaqAI	TTAA	7 cut(s)	84, 276, 618, 1077, 1094, 1686, 2168
Sau96I	GGNCC	2 cut(s)	51, 140
SchI	GAGTC	2 cut(s)	523, 2189
ScrFI	CCNGG	4 cut(s)	152, 173, 1179, 1648
SduI	GDGCHC	1 cut(s)	2041
SfcI	CTRYAG	2 cut(s)	537, 1778
SinI	GGWCC	2 cut(s)	51, 140
SmiI	ATTTAAAT	1 cut(s)	2169
SmiMI	CAYNNNNRTG	2 cut(s)	513, 1707
SmlI	CTYRAG	3 cut(s)	672, 1358, 1613
SmoI	CTYRAG	3 cut(s)	672, 1358, 1613
SphI	GCATGC	1 cut(s)	552
SseBI	AGGCCT	1 cut(s)	79
SsiI	CCGC	4 cut(s)	218, 750, 1462, 2048
SspI	AATATT	2 cut(s)	204, 435
SspMI	CTAG	7 cut(s)	122, 377, 1116, 1404, 1428, 1917, 1941
StuI	AGGCCT	1 cut(s)	79
StyD4I	CCNGG	4 cut(s)	150, 171, 1177, 1646
StyI	CCWWGG	2 cut(s)	2060, 2088
SwaI	ATTTAAAT	1 cut(s)	2169
TaaI	ACNGT	7 cut(s)	213, 824, 1219, 1305, 1569, 1736, 2223
TaiI	ACGT	3 cut(s)	241, 714, 2134
TaqI	TCGA	6 cut(s)	397, 760, 877, 1320, 1973, 2027
TatI	WGTACW	2 cut(s)	244, 1901
TauI	GCSGC	1 cut(s)	1465
Tru1I	TTAA	7 cut(s)	84, 276, 618, 1077, 1094, 1686, 2168
Tru9I	TTAA	7 cut(s)	84, 276, 618, 1077, 1094, 1686, 2168
TscAI	CASTG	6 cut(s)	373, 913, 928, 1200, 1314, 1479
TseFI	GTSAC	2 cut(s)	923, 1730
Tsp45I	GTSAC	2 cut(s)	923, 1730
TspGWI	ACGGA	1 cut(s)	11
TspRI	CASTG	6 cut(s)	373, 913, 928, 1200, 1314, 1479
Tth111I	GACNNNGTC	1 cut(s)	1303
Van91I	CCANNNNNTGG	2 cut(s)	1199, 2143
VpaK11BI	GGWCC	2 cut(s)	51, 140
XapI	RAATTY	4 cut(s)	272, 477, 1090, 1881
XceI	RCATGY	5 cut(s)	323, 497, 552, 1019, 1558
XmnI	GAANNNNTTC	2 cut(s)	1925, 2151
XspI	CTAG	7 cut(s)	122, 377, 1116, 1404, 1428, 1917, 1941
Zsp2I	ATGCAT	3 cut(s)	495, 554, 1972

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.