Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0006813

Physical Location & Seq

Genomic Coordinates Reverse (-)

47432905 .. 47447364

Gene Structure 14460 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG370800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2691 bp

ATGTCGGCTTCTTTAGCTGCTTTTGAGCGCCCCCGCCCCGGAGCTTCTAACACGGTCTTCAAGAGTGGCCCATTATTCATATCTTCAAAAGGAATAGGGTGGAAGTCTTGGAAGAAGCGGTGGTTTATCCTCACACGGACTTCTTTGGTTTTCTTTAAAAACGATCCTAGCGCACTTCCACAAAAAGGTGGTGAAGTATATTTGACTTTAGGAGGCATTGACCTGAACAATTCTGGGAGTGTTGTTGTTAGAGAAGATAAAAAGCTGCTGACTGTTTTATTTCCTGATGGACGTGATGGGCGGGCTTTCACTCTTAAGGCTGAGACATCAGAAGACTTGTACGAGTGGAAGACAGCCCTTGAACATGCCCTTGCACAAGCTCCAAGTGCCGCCCTTGTCATGGGGCACAATGGGATTTTCAGAAATGACACAAATGATACAATAGAAGGGTCTTTCCATCAATGGAGGGATAAGCGTCCTGTTAAATCTTTGGTCGTTGGAAGACCAATTCTGCTTGCCCTAGAAGATATTGATGGAGGTCCTTCTTTCCTCGAGAAAGCTCTTCGGTTCCTTGAAAAGTTTGGTACTAAAGTTGAAGGAATTTTGCGACAGTCTGCTGATGTTGAGGAGGTAGAACGCAGGGTACAAGAGTATGAACAAGGCAAGACTGAATTTGATCCTGATGAGGATGCTCATGTTGTTGGTGATTGTGTCAAGCACGTTCTGAGAGAGCTGCCCTCATCTCCAGTACCAGCTTCTTGCTGCACTGCCTTGCTGGAGGCTTATAAAATTGATCGAAAGGAAGCTCGGATCAATGCAATGCGGTCTTCAATATTAGAGACATTTCCTGAACCAAACCGCCGTTTATTACAAAGAATTTTAAAGATGATGTATACCATCTCTTCTCACTCTCATGAGAATCGAATGAATCCATCTGCAGTTGCTGCTTGCATGGCACCCTTGCTCTTACGCCCTCTATTGGCTGGTGAATGTGAGTTGGATGATGACTTTGATATTAATGGTGATAATTCTGCCCAGCTTCTTGCTGCTGCAAATGCCGCCAATAATGCTCAAGCAATCATCACTACGCTTTTGGAGGAGTTTGAAAACATTTTTGATGATGAGAATTTACTGCGGTGTTCGATCTCAGCTGATTCTCGAATTGAAAATAGCGGCAGTGATGATTCGTCCGATGATGACAACCTTGATATAAAAGATAATGGTTACCATGATGCCGAAAATGAAGTTGATGCGGAAACAGATGATGACCAAGATCGTGTACACAGTGGGAAATTGAGTGAAAGCAGCGGTTATGCTGGCAGTGACCTCTATGATTATAAGGCATTTGGGGCTGATGATTCTGATGTTGGATCGCCTAATGGAAATCATGCTTCAGCTGAGAGTTCAAAATCAGTTGTTCCTCAACAGAATCCAAACGTCGAAGGGATGGATAGAGGAGGCAAACAGATAAAAGAAAATGAAAATTCAATTAGTGAGAATGGTGAAACAAGCATACCAAGCACATCACCTGCGGGAGAATCGTACAGATCAATGGGAGAGATTCTATCAGCAATGGATCCAGGGCATCCTTTACCAGTTGTGTCTGAATCAGGAGCTGTTAAGGCAGTGGGTAAAGTAACAGGCTCCAATCATAGTGCAAAGCGAACAGCATTTTGGGGAAGAAGCAATGCAAGAAAGACACTATCCATGGAATCAGTCGATTCTTCTGGAGAGGAAGACAAGAATTCTCAGGCATCTGCTTTTCAATTCAATCTTTTGGGGTTAACATGCTATATTAGGCTTTCTATTCAGAGGCTTGAGATTGCTAAAAATGACCTGCAGCAGAGGATTGCAAAAGAGGCTAGAGGAAATGCAATTTTACAAGCTAGCTTGGAGAGAAGAAAGCAAGCTTTACATGAGAGGCGCCTGGCACTGGAACAAGATGTTTCAAGATTACAAGAACAGCTACAAGCTGAAAGAGATCTTAGAGCTGCATTAGAGGTTGGTTTGAGCATGTCTTCTGGACAGTTAACCAGTTCACGTGGCATGGATTCTAAGACAAGAGCTGAACTTGAGGAGATAGCTCTTGCTGAAGCAGATGTGGCCAGGTTGAAACAGAAAGTTGCAGAACTCCACCATCAACTTAATCAGCAGCGACAGAATCATTATGGTTCTCTCTCTGATGCATGTGACCGTTACCAGAACGTCCAAAATCATAATTCTCAACAGAGGTTTCTTCAGCAAGATTTTGATGCAACCCTCGCCTTTTGTAATCATGAACGGAAACAGAGGAATGAGGAGAATTTGTTGGGGGCGGATTGGAGGAATATCAAAGGACAAATTCTAGCATCTGGAAGTAGCACAAGGCAGCCATCAAGGAAGCAATTCATGGATCCAGGTAGCTTAAGTGAATCCAAAAGTACTGATGTATCCACAAGTTTGTCTGTTGATGAGCTTTCTGCTGTTGATTCTGCTTCCATTCCCTCGACTTCAAGAGCAGCAGAGGTGGTGGATTATCCAAGACATCCATCAACAGCATCTTCAGCCTTGGTAGAATTAACAACTCGTCTTGATTTCTTCAAGGAAAGACGTTCTCAGCTAATGGAACAGCTTCATAACCTTGATTTAAATTATGGCGCAACATCTTTGCAAGACTCAGTCTATAGACCATCGTCCCCACCATGGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0000911 GO:0000919 GO:0003674 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006996 GO:0007049 GO:0008047 GO:0008150 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009832 GO:0009920 GO:0009987 GO:0016020 GO:0016043 GO:0022402 GO:0022607 GO:0030234 GO:0030695 GO:0031976 GO:0031984 GO:0032506 GO:0034357 GO:0042546 GO:0042651 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043547 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0050790 GO:0051301 GO:0051336 GO:0051345 GO:0055035 GO:0060589 GO:0061640 GO:0065007 GO:0065009 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0098772 GO:0140014 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lzipper-MIP1 PH RhoGAP

Protein Analysis

896

Amino Acids

98.94

Weight (kDa)

5.2

Isoelectric Point (pI)

49.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH	PF00169	20 - 124	2.6e-13	PH domain
RhoGAP	PF00620	181 - 325	5.1e-34	RhoGAP domain
Lzipper-MIP1	PF14389	638 - 718	1.3e-21	Leucine-zipper of ternary complex factor MIP1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19390 AT5G19390 AT5G19390 AT5G19390
fragaria_vesca	FvH4_3g27830 FvH4_3g27830 FvH4_3g27830 FvH4_3g27830
malus_domestica	MD03G1165400.v1.1 MD11G1184700.v1.1
prunus_persica	Prupe.4G265200_v2.0.a1 Prupe.4G265200_v2.0.a1 Prupe.4G265200_v2.0.a1 Prupe.4G265300_v2.0.a1
pyrus_communis	pycom03g11990 pycom12g08810
rosa_chinensis	RchiOBHm_Chr5g0050541
rosa_laevigata	RLG00000034705
rosa_multiflora	Rmu_sc0004301.1_g000009
rosa_roxburghii	Rroxscaffold_1G00030350
rosa_rugosa	Rorug05G0261400
rosa_samantha	Rh5AG333300 Rh5BG343200 Rh5CG370800 Rh5DG355900
rosa_wichuraiana	Rw5G031480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	786, 1338
AarI	CACCTGC	1 cut(s)	1537
Acc36I	ACCTGC	2 cut(s)	1537, 1845
AccB1I	GGYRCC	2 cut(s)	955, 1923
AccI	GTMKAC	1 cut(s)	893
AclWI	GGATC	8 cut(s)	158, 671, 818, 1378, 1571, 1584, 2387, 2400
AcoI	YGGCCR	1 cut(s)	2103
AcsI	RAATTY	8 cut(s)	600, 671, 876, 1126, 1483, 1744, 2302, 2340
AcuI	CTGAAG	4 cut(s)	1377, 2112, 2222, 2526
AcvI	CACGTG	1 cut(s)	2042
AcyI	GRCGYC	1 cut(s)	1924
AfaI	GTAC	7 cut(s)	341, 586, 645, 750, 1281, 1544, 2422
AfiI	CCNNNNNNNGG	6 cut(s)	38, 185, 400, 979, 1933, 2682
AflII	CTTAAG	2 cut(s)	314, 2404
AjiI	CACGTC	1 cut(s)	293
AjnI	CCWGG	4 cut(s)	1579, 1926, 2105, 2395
AjuI	GAANNNNNNNTTGG	2 cut(s)	1657, 1689
Alw26I	GTCTC	2 cut(s)	317, 833
AlwI	GGATC	8 cut(s)	158, 671, 818, 1378, 1571, 1584, 2387, 2400
AlwNI	CAGNNNCTG	2 cut(s)	944, 1616
Ama87I	CYCGRG	1 cut(s)	551
AoxI	GGCC	2 cut(s)	67, 2103
ApoI	RAATTY	8 cut(s)	600, 671, 876, 1126, 1483, 1744, 2302, 2340
AseI	ATTAAT	1 cut(s)	1017
Asp700I	GAANNNNTTC	2 cut(s)	2384, 2610
AspLEI	GCGC	4 cut(s)	30, 173, 1926, 2639
AspS9I	GGNCC	2 cut(s)	68, 539
AsuC2I	CCSGG	1 cut(s)	39
AsuHPI	GGTGA	6 cut(s)	203, 716, 998, 1034, 1514, 1518
AsuNHI	GCTAGC	1 cut(s)	1886
AvaI	CYCGRG	1 cut(s)	551
AvaII	GGWCC	1 cut(s)	539
BaeGI	GKGCMC	1 cut(s)	408
BaeI	ACNNNNGTAYC	6 cut(s)	576, 609, 635, 668, 2412, 2445
BalI	TGGCCA	1 cut(s)	2105
BamHI	GGATCC	2 cut(s)	1576, 2392
BanI	GGYRCC	2 cut(s)	955, 1923
BbrPI	CACGTG	1 cut(s)	2042
BbsI	GAAGAC	7 cut(s)	49, 339, 356, 508, 819, 1743, 2010
BceAI	ACGGC	1 cut(s)	846
BciT130I	CCWGG	4 cut(s)	1581, 1928, 2107, 2397
BciVI	GTATCC	1 cut(s)	2440
BcnI	CCSGG	1 cut(s)	39
BcoDI	GTCTC	2 cut(s)	317, 833
BfaI	CTAG	5 cut(s)	168, 521, 1863, 1887, 2345
BfmI	CTRYAG	3 cut(s)	936, 1838, 2662
BfoI	RGCGCY	2 cut(s)	31, 1927
BfrI	CTTAAG	2 cut(s)	314, 2404
BfuAI	ACCTGC	2 cut(s)	1537, 1845
BfuI	GTATCC	1 cut(s)	2440
BglII	AGATCT	1 cut(s)	1981
BmcAI	AGTACT	1 cut(s)	2422
Bme1390I	CCNGG	5 cut(s)	39, 1581, 1928, 2107, 2397
Bme18I	GGWCC	1 cut(s)	539
BmeT110I	CYCGRG	1 cut(s)	551
BmgBI	CACGTC	1 cut(s)	293
BmgT120I	GGNCC	2 cut(s)	68, 539
BmiI	GGNNCC	6 cut(s)	569, 957, 1578, 1645, 1925, 2394
BmrFI	CCNGG	5 cut(s)	39, 1581, 1928, 2107, 2397
BmsI	GCATC	9 cut(s)	679, 1222, 1240, 1594, 1763, 2173, 2242, 2357, 2546
BmtI	GCTAGC	1 cut(s)	1890
BoxI	GACNNNNGTC	1 cut(s)	2671
BpiI	GAAGAC	7 cut(s)	49, 339, 356, 508, 819, 1743, 2010
BplI	GAGNNNNNCTC	2 cut(s)	722, 754
BpmI	CTGGAG	3 cut(s)	729, 797, 1749
BpuEI	CTTGAG	3 cut(s)	1056, 1838, 2093
BpuMI	CCSGG	1 cut(s)	39
BsaAI	YACGTR	1 cut(s)	2042
BsaHI	GRCGYC	1 cut(s)	1924
BsaJI	CCNNGG	5 cut(s)	37, 1580, 1707, 2547, 2681
BsaXI	ACNNNNNCTCC	2 cut(s)	2291, 2321
Bsc4I	CCNNNNNNNGG	6 cut(s)	38, 185, 400, 979, 1933, 2682
Bse1I	ACTGG	4 cut(s)	746, 1595, 1938, 2034
Bse3DI	GCAATG	3 cut(s)	825, 1578, 1693
BseBI	CCWGG	4 cut(s)	1581, 1928, 2107, 2397
BseDI	CCNNGG	5 cut(s)	37, 1580, 1707, 2547, 2681
BseGI	GGATG	5 cut(s)	694, 1006, 1452, 1585, 2524
BseLI	CCNNNNNNNGG	6 cut(s)	38, 185, 400, 979, 1933, 2682
BseMI	GCAATG	3 cut(s)	825, 1578, 1693
BseMII	CTCAG	7 cut(s)	312, 716, 1161, 1389, 1763, 2609, 2670
BseNI	ACTGG	4 cut(s)	746, 1595, 1938, 2034
BseRI	GAGGAG	5 cut(s)	641, 1112, 1470, 2090, 2312
BseSI	GKGCMC	1 cut(s)	408
BseYI	CCCAGC	1 cut(s)	1035
BsgI	GTGCAG	1 cut(s)	748
BshFI	GGCC	2 cut(s)	69, 2105
BshNI	GGYRCC	2 cut(s)	955, 1923
BsiHKCI	CYCGRG	1 cut(s)	551
BsiSI	CCGG	1 cut(s)	39
BslFI	GGGAC	1 cut(s)	2659
BslI	CCNNNNNNNGG	6 cut(s)	38, 185, 400, 979, 1933, 2682
BsmAI	GTCTC	2 cut(s)	317, 833
BsmFI	GGGAC	1 cut(s)	2659
BsnI	GGCC	2 cut(s)	69, 2105
BsoBI	CYCGRG	1 cut(s)	551
Bsp1286I	GDGCHC	1 cut(s)	408
Bsp1407I	TGTACA	1 cut(s)	1279
Bsp19I	CCATGG	2 cut(s)	1707, 2681
BspANI	GGCC	2 cut(s)	69, 2105
BspCNI	CTCAG	7 cut(s)	313, 717, 1160, 1390, 1762, 2608, 2669
BspHI	TCATGA	2 cut(s)	913, 2275
BspLI	GGNNCC	6 cut(s)	569, 957, 1578, 1645, 1925, 2394
BspMAI	CTGCAG	2 cut(s)	940, 1842
BspMI	ACCTGC	2 cut(s)	1537, 1845
BspOI	GCTAGC	1 cut(s)	1890
BspPI	GGATC	8 cut(s)	158, 671, 818, 1378, 1571, 1584, 2387, 2400
BspQI	GCTCTTC	1 cut(s)	567
BspT107I	GGYRCC	2 cut(s)	955, 1923
BspTI	CTTAAG	2 cut(s)	314, 2404
BsrDI	GCAATG	3 cut(s)	825, 1578, 1693
BsrGI	TGTACA	1 cut(s)	1279
BsrI	ACTGG	4 cut(s)	746, 1595, 1938, 2034
BssECI	CCNNGG	5 cut(s)	37, 1580, 1707, 2547, 2681
BssNAI	GTATAC	1 cut(s)	894
BssNI	GRCGYC	1 cut(s)	1924
BssT1I	CCWWGG	3 cut(s)	1707, 2547, 2681
Bst1107I	GTATAC	1 cut(s)	894
Bst2UI	CCWGG	4 cut(s)	1581, 1928, 2107, 2397
Bst4CI	ACNGT	6 cut(s)	55, 274, 612, 1286, 2028, 2195
Bst6I	CTCTTC	2 cut(s)	567, 907
BstACI	GRCGYC	1 cut(s)	1924
BstAFI	CTTAAG	2 cut(s)	314, 2404
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstAUI	TGTACA	1 cut(s)	1279
BstBAI	YACGTR	1 cut(s)	2042
BstC8I	GCNNGC	6 cut(s)	303, 516, 949, 1318, 1888, 1908
BstDEI	CTNAG	9 cut(s)	321, 725, 1147, 1398, 1749, 1985, 2055, 2595, 2656
BstDSI	CCRYGG	2 cut(s)	1707, 2681
BstEII	GGTNACC	1 cut(s)	1223
BstF5I	GGATG	5 cut(s)	694, 1006, 1452, 1585, 2524
BstH2I	RGCGCY	2 cut(s)	31, 1927
BstHHI	GCGC	4 cut(s)	30, 173, 1926, 2639
BstMAI	GTCTC	2 cut(s)	317, 833
BstNI	CCWGG	4 cut(s)	1581, 1928, 2107, 2397
BstNSI	RCATGY	4 cut(s)	368, 1791, 2017, 2190
BstPAI	GACNNNNGTC	1 cut(s)	2671
BstPI	GGTNACC	1 cut(s)	1223
BstSCI	CCNGG	5 cut(s)	37, 1579, 1926, 2105, 2395
BstSFI	CTRYAG	3 cut(s)	936, 1838, 2662
BstSLI	GKGCMC	1 cut(s)	408
BstV2I	GAAGAC	7 cut(s)	49, 339, 356, 508, 819, 1743, 2010
BstX2I	RGATCY	3 cut(s)	1576, 1981, 2392
BstYI	RGATCY	3 cut(s)	1576, 1981, 2392
BstZ17I	GTATAC	1 cut(s)	894
BsuI	GTATCC	1 cut(s)	2440
BsuRI	GGCC	2 cut(s)	69, 2105
BtgI	CCRYGG	2 cut(s)	1707, 2681
BtrI	CACGTC	1 cut(s)	293
BtsCI	GGATG	5 cut(s)	694, 1006, 1452, 1585, 2524
BtsI	GCAGTG	4 cut(s)	765, 1183, 1327, 1632
BtsIMutI	CAGTG	6 cut(s)	765, 1183, 1291, 1327, 1632, 1931
BveI	ACCTGC	2 cut(s)	1537, 1845
Cac8I	GCNNGC	6 cut(s)	303, 516, 949, 1318, 1888, 1908
CaiI	CAGNNNCTG	2 cut(s)	944, 1616
CciI	TCATGA	2 cut(s)	913, 2275
CfoI	GCGC	4 cut(s)	30, 173, 1926, 2639
Cfr13I	GGNCC	2 cut(s)	68, 539
CseI	GACGC	1 cut(s)	464
Csp6I	GTAC	7 cut(s)	340, 585, 644, 749, 1280, 1543, 2421
CviQI	GTAC	7 cut(s)	340, 585, 644, 749, 1280, 1543, 2421
DdeI	CTNAG	9 cut(s)	321, 725, 1147, 1398, 1749, 1985, 2055, 2595, 2656
DinI	GGCGCC	1 cut(s)	1925
DraI	TTTAAA	3 cut(s)	157, 882, 2628
EaeI	YGGCCR	1 cut(s)	2103
Eam1104I	CTCTTC	2 cut(s)	567, 907
EarI	CTCTTC	2 cut(s)	567, 907
EciI	GGCGGA	1 cut(s)	2330
Eco130I	CCWWGG	3 cut(s)	1707, 2547, 2681
Eco47I	GGWCC	1 cut(s)	539
Eco57I	CTGAAG	4 cut(s)	1377, 2112, 2222, 2526
Eco72I	CACGTG	1 cut(s)	2042
Eco88I	CYCGRG	1 cut(s)	551
Eco91I	GGTNACC	1 cut(s)	1223
EcoO109I	RGGNCCY	1 cut(s)	539
EcoO65I	GGTNACC	1 cut(s)	1223
EcoRI	GAATTC	1 cut(s)	1744
EcoRII	CCWGG	4 cut(s)	1579, 1926, 2105, 2395
EcoT14I	CCWWGG	3 cut(s)	1707, 2547, 2681
EcoT22I	ATGCAT	1 cut(s)	2188
EgeI	GGCGCC	1 cut(s)	1925
EheI	GGCGCC	1 cut(s)	1925
ErhI	CCWWGG	3 cut(s)	1707, 2547, 2681
FaqI	GGGAC	1 cut(s)	2659
FauI	CCCGC	3 cut(s)	41, 294, 1525
FblI	GTMKAC	1 cut(s)	893
FokI	GGATG	5 cut(s)	701, 1013, 1459, 1572, 2511
FspBI	CTAG	5 cut(s)	168, 521, 1863, 1887, 2345
GlaI	GCGC	4 cut(s)	29, 172, 1925, 2638
GsaI	CCCAGC	1 cut(s)	1039
GsuI	CTGGAG	3 cut(s)	729, 797, 1749
HaeII	RGCGCY	2 cut(s)	31, 1927
HaeIII	GGCC	2 cut(s)	69, 2105
HapII	CCGG	1 cut(s)	39
HgaI	GACGC	1 cut(s)	464
HhaI	GCGC	4 cut(s)	30, 173, 1926, 2639
Hin1I	GRCGYC	1 cut(s)	1924
Hin6I	GCGC	4 cut(s)	28, 171, 1924, 2637
HinP1I	GCGC	4 cut(s)	28, 171, 1924, 2637
HincII	GTYRAC	2 cut(s)	1785, 2031
HindII	GTYRAC	2 cut(s)	1785, 2031
HindIII	AAGCTT	1 cut(s)	1908
HpaI	GTTAAC	2 cut(s)	1785, 2031
HpaII	CCGG	1 cut(s)	39
HphI	GGTGA	6 cut(s)	203, 716, 998, 1034, 1514, 1518
Hpy166II	GTNNAC	6 cut(s)	894, 1280, 1282, 1785, 2031, 2039
Hpy188I	TCNGA	9 cut(s)	331, 422, 726, 810, 1192, 1363, 1606, 1812, 2182
Hpy8I	GTNNAC	6 cut(s)	894, 1280, 1282, 1785, 2031, 2039
Hpy99I	CGWCG	1 cut(s)	1442
HpyAV	CCTTC	4 cut(s)	440, 552, 590, 1436
HpyCH4III	ACNGT	6 cut(s)	55, 274, 612, 1286, 2028, 2195
HpyCH4IV	ACGT	6 cut(s)	292, 720, 1437, 2041, 2205, 2590
HpyF3I	CTNAG	9 cut(s)	321, 725, 1147, 1398, 1749, 1985, 2055, 2595, 2656
HpySE526I	ACGT	6 cut(s)	292, 720, 1437, 2041, 2205, 2590
Hsp92I	GRCGYC	1 cut(s)	1924
HspAI	GCGC	4 cut(s)	28, 171, 1924, 2637
KasI	GGCGCC	1 cut(s)	1923
KspAI	GTTAAC	2 cut(s)	1785, 2031
LguI	GCTCTTC	1 cut(s)	567
LmnI	GCTCC	4 cut(s)	41, 385, 1613, 1649
LweI	GCATC	9 cut(s)	679, 1222, 1240, 1594, 1763, 2173, 2242, 2357, 2546
MaeI	CTAG	5 cut(s)	168, 521, 1863, 1887, 2345
MaeII	ACGT	6 cut(s)	292, 720, 1437, 2041, 2205, 2590
MaeIII	GTNAC	5 cut(s)	1223, 1322, 1636, 2189, 2195
MflI	RGATCY	3 cut(s)	1576, 1981, 2392
MhlI	GDGCHC	1 cut(s)	408
MlsI	TGGCCA	1 cut(s)	2105
MluNI	TGGCCA	1 cut(s)	2105
Mly113I	GGCGCC	1 cut(s)	1924
MlyI	GAGTC	1 cut(s)	2648
MmeI	TCCRAC	3 cut(s)	478, 978, 1348
Mox20I	TGGCCA	1 cut(s)	2105
Mph1103I	ATGCAT	1 cut(s)	2188
MroXI	GAANNNNTTC	2 cut(s)	2384, 2610
MscI	TGGCCA	1 cut(s)	2105
MslI	CAYNNNNRTG	1 cut(s)	912
Msp20I	TGGCCA	1 cut(s)	2105
MspA1I	CMGCKG	3 cut(s)	1151, 1308, 1397
MspCI	CTTAAG	2 cut(s)	314, 2404
MspI	CCGG	1 cut(s)	39
MspR9I	CCNGG	5 cut(s)	39, 1581, 1928, 2107, 2397
MvaI	CCWGG	4 cut(s)	1581, 1928, 2107, 2397
NarI	GGCGCC	1 cut(s)	1924
NciI	CCSGG	1 cut(s)	39
NcoI	CCATGG	2 cut(s)	1707, 2681
NheI	GCTAGC	1 cut(s)	1886
NlaIV	GGNNCC	6 cut(s)	569, 957, 1578, 1645, 1925, 2394
NmuCI	GTSAC	2 cut(s)	1322, 2189
NsiI	ATGCAT	1 cut(s)	2188
NspI	RCATGY	4 cut(s)	368, 1791, 2017, 2190
PaeR7I	CTCGAG	1 cut(s)	551
PagI	TCATGA	2 cut(s)	913, 2275
PaqCI	CACCTGC	1 cut(s)	1537
PciSI	GCTCTTC	1 cut(s)	567
PdmI	GAANNNNTTC	2 cut(s)	2384, 2610
PflFI	GACNNNGTC	1 cut(s)	2657
PleI	GAGTC	1 cut(s)	2648
PluTI	GGCGCC	1 cut(s)	1927
PmaCI	CACGTG	1 cut(s)	2042
PmlI	CACGTG	1 cut(s)	2042
PpsI	GAGTC	1 cut(s)	2648
Ppu21I	YACGTR	1 cut(s)	2042
PpuMI	RGGWCCY	1 cut(s)	539
PshAI	GACNNNNGTC	1 cut(s)	2671
PshBI	ATTAAT	1 cut(s)	1017
PsiI	TTATAA	2 cut(s)	786, 1338
Psp5II	RGGWCCY	1 cut(s)	539
Psp6I	CCWGG	4 cut(s)	1579, 1926, 2105, 2395
PspCI	CACGTG	1 cut(s)	2042
PspEI	GGTNACC	1 cut(s)	1223
PspFI	CCCAGC	1 cut(s)	1035
PspGI	CCWGG	4 cut(s)	1579, 1926, 2105, 2395
PspN4I	GGNNCC	6 cut(s)	569, 957, 1578, 1645, 1925, 2394
PspPI	GGNCC	2 cut(s)	68, 539
PspPPI	RGGWCCY	1 cut(s)	539
PsrI	GAACNNNNNNTAC	2 cut(s)	627, 659
PstI	CTGCAG	2 cut(s)	940, 1842
PstNI	CAGNNNCTG	2 cut(s)	944, 1616
PsuI	RGATCY	3 cut(s)	1576, 1981, 2392
PsyI	GACNNNGTC	1 cut(s)	2657
PvuII	CAGCTG	2 cut(s)	1151, 1397
RsaI	GTAC	7 cut(s)	341, 586, 645, 750, 1281, 1544, 2422
RsaNI	GTAC	7 cut(s)	340, 585, 644, 749, 1280, 1543, 2421
RseI	CAYNNNNRTG	1 cut(s)	912
SapI	GCTCTTC	1 cut(s)	567
Sau96I	GGNCC	2 cut(s)	68, 539
ScaI	AGTACT	1 cut(s)	2422
SchI	GAGTC	1 cut(s)	2648
ScrFI	CCNGG	5 cut(s)	39, 1581, 1928, 2107, 2397
SduI	GDGCHC	1 cut(s)	408
SfaNI	GCATC	9 cut(s)	679, 1222, 1240, 1594, 1763, 2173, 2242, 2357, 2546
SfcI	CTRYAG	3 cut(s)	936, 1838, 2662
SfoI	GGCGCC	1 cut(s)	1925
Sfr274I	CTCGAG	1 cut(s)	551
SinI	GGWCC	1 cut(s)	539
SlaI	CTCGAG	1 cut(s)	551
SmiI	ATTTAAAT	1 cut(s)	2628
SmiMI	CAYNNNNRTG	1 cut(s)	912
SmlI	CTYRAG	6 cut(s)	314, 551, 1071, 1817, 2072, 2404
SmoI	CTYRAG	6 cut(s)	314, 551, 1071, 1817, 2072, 2404
SspDI	GGCGCC	1 cut(s)	1923
SspI	AATATT	1 cut(s)	834
SspMI	CTAG	5 cut(s)	168, 521, 1863, 1887, 2345
StyD4I	CCNGG	5 cut(s)	37, 1579, 1926, 2105, 2395
StyI	CCWWGG	3 cut(s)	1707, 2547, 2681
SwaI	ATTTAAAT	1 cut(s)	2628
TaaI	ACNGT	6 cut(s)	55, 274, 612, 1286, 2028, 2195
TaiI	ACGT	6 cut(s)	295, 723, 1440, 2044, 2208, 2593
TaqI	TCGA	8 cut(s)	552, 796, 922, 1142, 1159, 1440, 1719, 2486
TatI	WGTACW	2 cut(s)	1279, 2420
TauI	GCSGC	3 cut(s)	392, 1061, 1176
TscAI	CASTG	6 cut(s)	772, 1183, 1291, 1327, 1632, 1938
TseFI	GTSAC	2 cut(s)	1322, 2189
Tsp45I	GTSAC	2 cut(s)	1322, 2189
TspDTI	ATGAA	8 cut(s)	67, 669, 941, 1257, 1494, 2292, 2377, 2603
TspGWI	ACGGA	2 cut(s)	151, 2296
TspRI	CASTG	6 cut(s)	772, 1183, 1291, 1327, 1632, 1938
Tth111I	GACNNNGTC	1 cut(s)	2657
Vha464I	CTTAAG	2 cut(s)	314, 2404
VpaK11BI	GGWCC	1 cut(s)	539
VspI	ATTAAT	1 cut(s)	1017
XapI	RAATTY	8 cut(s)	600, 671, 876, 1126, 1483, 1744, 2302, 2340
XceI	RCATGY	4 cut(s)	368, 1791, 2017, 2190
XhoI	CTCGAG	1 cut(s)	551
XmiI	GTMKAC	1 cut(s)	893
XmnI	GAANNNNTTC	2 cut(s)	2384, 2610
XspI	CTAG	5 cut(s)	168, 521, 1863, 1887, 2345
ZrmI	AGTACT	1 cut(s)	2422
Zsp2I	ATGCAT	1 cut(s)	2188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.