FvH4_3g28380

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0011545
Physical Location & Seq
Reverse (-)
21340083 .. 21342362
2280 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g28380.t1

Sequence Viewer

Length: 2280 bp
ATGTATCGGTTTGGATCAGGAGCTGCTAACAGAAGCCAGATTAGAGCTTTCTCCAGATCAATTACCAAACACCCACCACTTCCTTCCAAGTTGGCTTCCTTCTTGGACAAGTGCTCAGACGCTTTCTCACTTAGAAAACTCCATGCTCGTATTCTTGCTCTAGGCCTCGCCAACCATACCCTTCTCAACTGCTATCACAAGCAGTCAGAATCCACATGGAACTCAATCCTTGTTGGGTATTACAGAGCTGGTCATTTCGCGCAAGTCCTAACAAGGTACATTCATTTGAGGCGGCAATGGAGCATTGGGTTGGACAGTGCAGCCATTACGTTTGCTTGTAAGAGCTGTATTGAGTTGAATCATCTCGAATTGGGTCGAGGAATTCATGCGGATGCAGTCAAGTTTGGGTTGAATGGAAATGGATTTGTGGGTTCGTCGCTTATTGGGTTCTACGGTAAATGTGGAAGCATGGGCGATGCGCGTAAGGTGTTTGATGAAATTACTCACCCGGATGTTGTTGTGTATACTTCCATTATTACAGGGTACGCTCACATTGGTCATTTTCGGGCTTACGAGGCTTTCGGGATTGCTGTCCGAATGCAGAGGAAAGGTTTGCTTCCTAATAGGGTCACCCTGGTGAGCTTACTTCAGGCAGCTTCACAGTTGGACACACTGAAAGAAGGTCGGTCTGTCCATGGTTATGCTATTAGAAGAGGAATTGGTGGTTTTGATGAAGTTTTCGAGACAAGTCTCATGGACATGTATAACAAGTGTGGGGCACCTAAAATAGCAGCCTGCATTTTTGGCAAAATGAAGAAAAAGACAATTGGTTTGTGGAATGTGATGATCGCAGGTTATCTTAGATCGGAGCTGCCCTTGCAAGCTTTCCGGTGTTTCTGTCAAGTGATGCAAGAAAAATATGTTCCGGATTTGATAACTTTCTCCAATGGGATTTTGTCTTGTGCTCACTTGAGTTATTTGCCTGAGGGAAAGAGTATCCATGGTCACATAATTCGTGTTGGTGTTAAACTTGATGTAGTAGCAACCACTTCTCTGGTCGATCTGTACTCCAAATGCTACAAGTTGATCCAAGCCAGGACATTATTTGATAGAATGGAGAAAAAAGATGCTATCTTTTACGATGTGATGATGAATGGTTATCTGCACAATTATTTTGCCAGTGAAGCTACGCACATTTTTCTGGAAATGGTTCAAGAGGGAATTCAACCAAACCTAGGTTCCATTTTGACTTTACTTTCTGCAACTTCGGAACTGAAAGACTTTAGAAATGGCAAGTGCATTCATGGATATGTATTGAGATATGGATTTGATTTGAACGTTGAAATTGCCAATCAAATGATCTACATGTACTCAAAATTTGGATTAATAGTGTGCGCGAGAAAAGTCTTTAACAAGATAAGATATAGAGACTTGGTCTCATGGACTTCAATGATGATGGGTTATGTTCATCATGGGCATGCTGATGAAGCTATAATATTGTTCCAATTAATGCAAAGGGAGCAGGTGGAAGATGATACTGTCACGCTGTTAACTTTGCTTCAGGCACTTCCTCAGCTTGGATGTCTGAATTTAGTGAAGGAAGTCCATTGTCACTATTATAGAGTTAATATAGACAGTGAGATATCTCTCACCAATTCTTTGGTAACTACTTATTCCAAGTGTGGGAAGTTAAATATGGCTGCAAATCTTTTTGATCATGCAGTTAAACGGTGTCCGACTTCATGGAATGCAATGATACATGCATATGGGATGCATGGAAAATGTACGGAGGCCCTCATGGTTTTTGAACAGATGAAAAGCAATAAAGTTGAGCCTGATGGGTTTACCTTTACATCAATACTTACTGCTTGTAGCCATTCTGGCATGGTAAATGAGGGACTTCAAGTCTTCAAGTCGATGGTTGAGGAGTTCTCTATAATCCCTTGTGAAGAGCACTATGGTTGCATGGTAGATTTATTAAGCCGAGCAGGATTGCTTGAAGAAGCATATAATCTGGTTAAATCCCTGCCATCAAGGCTCGGTGATTCTACACTAGGCACCTTGCTTGCTGCTTGTAAGTTACATGGAAATACAGAGATGGGGGAGAATATAGGAAGGCGTCTCTTGGATTTAGAACCCAAGAATTCTAGTGCATTTGCCATGGTTTCAAGTTTATATGCAGAAGGTGGAAAGTGGGGTGAAGTGGTCAAAATAAGAGCCAGAGAAAAAGGGAGAGGTTTAAAAAGAACTCCAGGGTATAGTCTGATACAAGTAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

760

Amino Acids

84.92

Weight (kDa)

8.92

Isoelectric Point (pI)

37.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 170 - 218 5.8e-06 PPR repeat family
PPR_2 PF13041 477 - 523 1.6e-07 PPR repeat family
PPR PF01535 479 - 508 1.3e-06 PPR repeat
PPR_2 PF13041 581 - 625 1.2e-12 PPR repeat family
PPR PF01535 581 - 609 4.3e-08 PPR repeat
PPR_3 PF13812 582 - 624 5e-06 Pentatricopeptide repeat domain
E_motif PF20431 695 - 757 6.6e-13 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1513
Acc36I ACCTGC 2 cut(s) 842, 1513
AccB1I GGYRCC 2 cut(s) 778, 2057
AccI GTMKAC 1 cut(s) 524
AccII CGCG 3 cut(s) 260, 481, 1397
AccIII TCCGGA 1 cut(s) 925
AciI CCGC 2 cut(s) 292, 389
AclI AACGTT 1 cut(s) 1338
AclWI GGATC 2 cut(s) 22, 1081
AcsI RAATTY 5 cut(s) 381, 1221, 1376, 1588, 2143
AcuI CTGAAG 2 cut(s) 632, 1544
AcyI GRCGYC 1 cut(s) 2119
AfaI GTAC 5 cut(s) 278, 545, 1067, 1370, 1786
AfiI CCNNNNNNNGG 3 cut(s) 1235, 1577, 1683
AflIII ACRYGT 2 cut(s) 759, 1365
AhdI GACNNNNNGTC 1 cut(s) 1904
AjnI CCWGG 3 cut(s) 633, 1094, 2251
AjuI GAANNNNNNNTTGG 2 cut(s) 1222, 1254
AleI CACNNNNGTG 1 cut(s) 635
Alw21I GWGCWC 3 cut(s) 116, 967, 1956
Alw26I GTCTC 5 cut(s) 737, 755, 1422, 1441, 2126
AlwI GGATC 2 cut(s) 22, 1081
AlwNI CAGNNNCTG 1 cut(s) 23
Aor13HI TCCGGA 1 cut(s) 925
AoxI GGCC 2 cut(s) 163, 1791
ApeKI GCWGC 7 cut(s) 23, 320, 653, 791, 871, 1700, 2069
ApoI RAATTY 5 cut(s) 381, 1221, 1376, 1588, 2143
ArsI GACNNNNNNTTYG 2 cut(s) 814, 846
AseI ATTAAT 2 cut(s) 1385, 1508
Asp700I GAANNNNTTC 1 cut(s) 1209
AspA2I CCTAGG 1 cut(s) 1234
AspLEI GCGC 3 cut(s) 262, 481, 1397
AspS9I GGNCC 1 cut(s) 1792
AsuC2I CCSGG 1 cut(s) 509
AsuHPI GGTGA 6 cut(s) 497, 622, 649, 1642, 2054, 2210
AvrII CCTAGG 1 cut(s) 1234
AxyI CCTNAGG 1 cut(s) 984
BaeGI GKGCMC 1 cut(s) 781
BanI GGYRCC 2 cut(s) 778, 2057
BbsI GAAGAC 1 cut(s) 1900
Bbv12I GWGCWC 3 cut(s) 116, 967, 1956
BbvCI CCTCAGC 1 cut(s) 1572
BbvI GCAGC 7 cut(s) 10, 332, 665, 803, 858, 1687, 2056
BccI CCATC 5 cut(s) 1450, 1832, 1912, 2038, 2092
BciT130I CCWGG 3 cut(s) 635, 1096, 2253
BciVI GTATCC 1 cut(s) 1007
BclI TGATCA 1 cut(s) 1714
BcnI CCSGG 1 cut(s) 509
BcoDI GTCTC 5 cut(s) 737, 755, 1422, 1441, 2126
BfaI CTAG 4 cut(s) 161, 1235, 2054, 2148
BfuAI ACCTGC 2 cut(s) 842, 1513
BfuI GTATCC 1 cut(s) 1007
BglI GCCNNNNNGGC 2 cut(s) 1881, 2035
BisI GCNGC 8 cut(s) 24, 293, 321, 654, 792, 872, 1701, 2070
BlnI CCTAGG 1 cut(s) 1234
BlsI GCNGC 8 cut(s) 25, 294, 322, 655, 793, 873, 1702, 2071
Bme1390I CCNGG 4 cut(s) 509, 635, 1096, 2253
BmeRI GACNNNNNGTC 1 cut(s) 1904
BmgT120I GGNCC 1 cut(s) 1792
BmiI GGNNCC 3 cut(s) 780, 1240, 2059
BmrFI CCNGG 4 cut(s) 509, 635, 1096, 2253
BmsI GCATC 5 cut(s) 382, 466, 897, 1117, 1761
BpiI GAAGAC 1 cut(s) 1900
BplI GAGNNNNNCTC 2 cut(s) 1916, 1948
BpmI CTGGAG 2 cut(s) 37, 2235
Bpu10I CCTNAGC 1 cut(s) 1572
BpuEI CTTGAG 1 cut(s) 991
BpuMI CCSGG 1 cut(s) 509
BsaHI GRCGYC 1 cut(s) 2119
BsaI GGTCTC 1 cut(s) 1441
BsaJI CCNNGG 6 cut(s) 633, 694, 1000, 1234, 2160, 2252
BsaWI WCCGGW 2 cut(s) 888, 925
Bsc4I CCNNNNNNNGG 3 cut(s) 1235, 1577, 1683
Bse1I ACTGG 1 cut(s) 1179
Bse21I CCTNAGG 1 cut(s) 984
Bse3DI GCAATG 2 cut(s) 302, 1758
BseAI TCCGGA 1 cut(s) 925
BseBI CCWGG 3 cut(s) 635, 1096, 2253
BseDI CCNNGG 6 cut(s) 633, 694, 1000, 1234, 2160, 2252
BseGI GGATG 4 cut(s) 397, 517, 1586, 1776
BseLI CCNNNNNNNGG 3 cut(s) 1235, 1577, 1683
BseMI GCAATG 2 cut(s) 302, 1758
BseMII CTCAG 3 cut(s) 129, 975, 1586
BseNI ACTGG 1 cut(s) 1179
BseRI GAGGAG 1 cut(s) 1940
BseSI GKGCMC 1 cut(s) 781
BseXI GCAGC 7 cut(s) 10, 332, 665, 803, 858, 1687, 2056
BsgI GTGCAG 2 cut(s) 339, 1148
Bsh1236I CGCG 3 cut(s) 260, 481, 1397
BshFI GGCC 2 cut(s) 165, 1793
BshNI GGYRCC 2 cut(s) 778, 2057
BsiHKAI GWGCWC 3 cut(s) 116, 967, 1956
BsiSI CCGG 3 cut(s) 509, 889, 926
BslFI GGGAC 1 cut(s) 1911
BslI CCNNNNNNNGG 3 cut(s) 1235, 1577, 1683
BsmAI GTCTC 5 cut(s) 737, 755, 1422, 1441, 2126
BsmBI CGTCTC 1 cut(s) 2126
BsmFI GGGAC 1 cut(s) 1911
BsmI GAATGC 3 cut(s) 603, 1299, 1753
BsnI GGCC 2 cut(s) 165, 1793
Bso31I GGTCTC 1 cut(s) 1441
Bsp1286I GDGCHC 4 cut(s) 116, 781, 967, 1956
Bsp13I TCCGGA 1 cut(s) 925
Bsp143I GATC 8 cut(s) 14, 56, 846, 863, 1060, 1086, 1359, 1714
Bsp19I CCATGG 3 cut(s) 694, 1000, 2160
BspACI CCGC 2 cut(s) 292, 389
BspANI GGCC 2 cut(s) 165, 1793
BspCNI CTCAG 3 cut(s) 128, 976, 1585
BspEI TCCGGA 1 cut(s) 925
BspFNI CGCG 3 cut(s) 260, 481, 1397
BspLI GGNNCC 3 cut(s) 780, 1240, 2059
BspMI ACCTGC 2 cut(s) 842, 1513
BspPI GGATC 2 cut(s) 22, 1081
BspQI GCTCTTC 1 cut(s) 1944
BspT107I GGYRCC 2 cut(s) 778, 2057
BspTNI GGTCTC 1 cut(s) 1441
BsrDI GCAATG 2 cut(s) 302, 1758
BsrI ACTGG 1 cut(s) 1179
BssECI CCNNGG 6 cut(s) 633, 694, 1000, 1234, 2160, 2252
BssMI GATC 8 cut(s) 14, 56, 846, 863, 1060, 1086, 1359, 1714
BssNAI GTATAC 1 cut(s) 525
BssNI GRCGYC 1 cut(s) 2119
BssT1I CCWWGG 4 cut(s) 694, 1000, 1234, 2160
Bst1107I GTATAC 1 cut(s) 525
Bst2UI CCWGG 3 cut(s) 635, 1096, 2253
Bst4CI ACNGT 6 cut(s) 317, 455, 663, 1540, 1637, 1731
Bst6I CTCTTC 2 cut(s) 706, 1944
BstACI GRCGYC 1 cut(s) 2119
BstC8I GCNNGC 4 cut(s) 796, 882, 1479, 2067
BstDEI CTNAG 5 cut(s) 115, 131, 860, 984, 1572
BstDSI CCRYGG 3 cut(s) 694, 1000, 2160
BstEII GGTNACC 1 cut(s) 628
BstF5I GGATG 4 cut(s) 397, 517, 1586, 1776
BstFNI CGCG 3 cut(s) 260, 481, 1397
BstHHI GCGC 3 cut(s) 262, 481, 1397
BstKTI GATC 8 cut(s) 17, 59, 849, 866, 1063, 1089, 1362, 1717
BstMAI GTCTC 5 cut(s) 737, 755, 1422, 1441, 2126
BstMBI GATC 8 cut(s) 14, 56, 846, 863, 1060, 1086, 1359, 1714
BstMWI GCNNNNNNNGC 8 cut(s) 575, 804, 877, 1184, 1487, 1519, 1881, 2035
BstNI CCWGG 3 cut(s) 635, 1096, 2253
BstNSI RCATGY 4 cut(s) 763, 1369, 1481, 1763
BstPI GGTNACC 1 cut(s) 628
BstSCI CCNGG 4 cut(s) 507, 633, 1094, 2251
BstSLI GKGCMC 1 cut(s) 781
BstUI CGCG 3 cut(s) 260, 481, 1397
BstV1I GCAGC 7 cut(s) 10, 332, 665, 803, 858, 1687, 2056
BstV2I GAAGAC 1 cut(s) 1900
BstXI CCANNNNNNTGG 2 cut(s) 1054, 1660
BstZ17I GTATAC 1 cut(s) 525
Bsu36I CCTNAGG 1 cut(s) 984
BsuI GTATCC 1 cut(s) 1007
BsuRI GGCC 2 cut(s) 165, 1793
BtgI CCRYGG 3 cut(s) 694, 1000, 2160
BtgZI GCGATG 1 cut(s) 489
BtsCI GGATG 4 cut(s) 397, 517, 1586, 1776
BtsIMutI CAGTG 4 cut(s) 322, 671, 1186, 1642
BveI ACCTGC 2 cut(s) 842, 1513
Cac8I GCNNGC 4 cut(s) 796, 882, 1479, 2067
CaiI CAGNNNCTG 1 cut(s) 23
CfoI GCGC 3 cut(s) 262, 481, 1397
Cfr13I GGNCC 1 cut(s) 1792
CseI GACGC 2 cut(s) 128, 2108
Csp6I GTAC 5 cut(s) 277, 544, 1066, 1369, 1785
CviQI GTAC 5 cut(s) 277, 544, 1066, 1369, 1785
DdeI CTNAG 5 cut(s) 115, 131, 860, 984, 1572
DpnI GATC 8 cut(s) 16, 58, 848, 865, 1062, 1088, 1361, 1716
DpnII GATC 8 cut(s) 14, 56, 846, 863, 1060, 1086, 1359, 1714
DraI TTTAAA 1 cut(s) 2241
DriI GACNNNNNGTC 1 cut(s) 1904
Eam1104I CTCTTC 2 cut(s) 706, 1944
Eam1105I GACNNNNNGTC 1 cut(s) 1904
EarI CTCTTC 2 cut(s) 706, 1944
Eco130I CCWWGG 4 cut(s) 694, 1000, 1234, 2160
Eco147I AGGCCT 1 cut(s) 165
Eco31I GGTCTC 1 cut(s) 1441
Eco32I GATATC 1 cut(s) 1644
Eco57I CTGAAG 2 cut(s) 632, 1544
Eco81I CCTNAGG 1 cut(s) 984
Eco91I GGTNACC 1 cut(s) 628
EcoO109I RGGNCCY 1 cut(s) 1792
EcoO65I GGTNACC 1 cut(s) 628
EcoRI GAATTC 3 cut(s) 381, 1221, 2143
EcoRII CCWGG 3 cut(s) 633, 1094, 2251
EcoRV GATATC 1 cut(s) 1644
EcoT14I CCWWGG 4 cut(s) 694, 1000, 1234, 2160
EcoT22I ATGCAT 2 cut(s) 1765, 1776
ErhI CCWWGG 4 cut(s) 694, 1000, 1234, 2160
Esp3I CGTCTC 1 cut(s) 2126
FalI AAGNNNNNCTT 2 cut(s) 600, 632
FaqI GGGAC 1 cut(s) 1911
FauNDI CATATG 1 cut(s) 1765
FbaI TGATCA 1 cut(s) 1714
FblI GTMKAC 1 cut(s) 524
Fnu4HI GCNGC 8 cut(s) 24, 293, 321, 654, 792, 872, 1701, 2070
FokI GGATG 4 cut(s) 404, 524, 1593, 1783
Fsp4HI GCNGC 8 cut(s) 24, 293, 321, 654, 792, 872, 1701, 2070
FspBI CTAG 4 cut(s) 161, 1235, 2054, 2148
GlaI GCGC 3 cut(s) 261, 480, 1396
GluI GCNGC 8 cut(s) 24, 293, 321, 654, 792, 872, 1701, 2070
GsuI CTGGAG 2 cut(s) 37, 2235
HaeIII GGCC 2 cut(s) 165, 1793
HapII CCGG 3 cut(s) 509, 889, 926
HgaI GACGC 2 cut(s) 128, 2108
HhaI GCGC 3 cut(s) 262, 481, 1397
Hin1I GRCGYC 1 cut(s) 2119
Hin6I GCGC 3 cut(s) 260, 479, 1395
HinP1I GCGC 3 cut(s) 260, 479, 1395
HincII GTYRAC 1 cut(s) 1551
HindII GTYRAC 1 cut(s) 1551
HindIII AAGCTT 1 cut(s) 882
HinfI GANTC 3 cut(s) 209, 358, 2045
HpaI GTTAAC 1 cut(s) 1551
HpaII CCGG 3 cut(s) 509, 889, 926
HphI GGTGA 6 cut(s) 497, 622, 649, 1642, 2054, 2210
Hpy166II GTNNAC 3 cut(s) 525, 1551, 1845
Hpy188I TCNGA 8 cut(s) 118, 208, 596, 868, 1270, 1587, 1737, 2265
Hpy188III TCNNGA 8 cut(s) 18, 54, 365, 583, 742, 926, 1202, 1214
Hpy8I GTNNAC 3 cut(s) 525, 1551, 1845
Hpy99I CGWCG 1 cut(s) 439
HpyAV CCTTC 7 cut(s) 93, 109, 191, 674, 1591, 2109, 2177
HpyCH4III ACNGT 6 cut(s) 317, 455, 663, 1540, 1637, 1731
HpyCH4IV ACGT 2 cut(s) 329, 1338
HpyF10VI GCNNNNNNNGC 8 cut(s) 575, 804, 877, 1184, 1487, 1519, 1881, 2035
HpyF3I CTNAG 5 cut(s) 115, 131, 860, 984, 1572
HpySE526I ACGT 2 cut(s) 329, 1338
Hsp92I GRCGYC 1 cut(s) 2119
HspAI GCGC 3 cut(s) 260, 479, 1395
Kpn2I TCCGGA 1 cut(s) 925
Ksp22I TGATCA 1 cut(s) 1714
KspAI GTTAAC 1 cut(s) 1551
Kzo9I GATC 8 cut(s) 14, 56, 846, 863, 1060, 1086, 1359, 1714
LguI GCTCTTC 1 cut(s) 1944
LmnI GCTCC 4 cut(s) 20, 300, 868, 1519
Lsp1109I GCAGC 7 cut(s) 10, 332, 665, 803, 858, 1687, 2056
LweI GCATC 5 cut(s) 382, 466, 897, 1117, 1761
MaeI CTAG 4 cut(s) 161, 1235, 2054, 2148
MaeII ACGT 2 cut(s) 329, 1338
MaeIII GTNAC 6 cut(s) 628, 1004, 1540, 1610, 1663, 2079
MalI GATC 8 cut(s) 16, 58, 848, 865, 1062, 1088, 1361, 1716
MboI GATC 8 cut(s) 14, 56, 846, 863, 1060, 1086, 1359, 1714
MboII GAAGA 6 cut(s) 723, 826, 1541, 1900, 1961, 2012
MfeI CAATTG 1 cut(s) 825
MhlI GDGCHC 4 cut(s) 116, 781, 967, 1956
MmeI TCCRAC 3 cut(s) 291, 645, 1760
Mph1103I ATGCAT 2 cut(s) 1765, 1776
MroI TCCGGA 1 cut(s) 925
MroXI GAANNNNTTC 1 cut(s) 1209
MslI CAYNNNNRTG 9 cut(s) 390, 510, 635, 699, 758, 1308, 1476, 1482, 1764
MspI CCGG 3 cut(s) 509, 889, 926
MspR9I CCNGG 4 cut(s) 509, 635, 1096, 2253
MunI CAATTG 1 cut(s) 825
Mva1269I GAATGC 3 cut(s) 603, 1299, 1753
MvaI CCWGG 3 cut(s) 635, 1096, 2253
MvnI CGCG 3 cut(s) 260, 481, 1397
MwoI GCNNNNNNNGC 8 cut(s) 575, 804, 877, 1184, 1487, 1519, 1881, 2035
NciI CCSGG 1 cut(s) 509
NcoI CCATGG 3 cut(s) 694, 1000, 2160
NdeI CATATG 1 cut(s) 1765
NdeII GATC 8 cut(s) 14, 56, 846, 863, 1060, 1086, 1359, 1714
NlaIV GGNNCC 3 cut(s) 780, 1240, 2059
NmeAIII GCCGAG 1 cut(s) 2009
NmuCI GTSAC 4 cut(s) 628, 1004, 1540, 1610
NsiI ATGCAT 2 cut(s) 1765, 1776
NspI RCATGY 4 cut(s) 763, 1369, 1481, 1763
OliI CACNNNNGTG 1 cut(s) 635
PaeI GCATGC 1 cut(s) 1481
PaqCI CACCTGC 1 cut(s) 1513
PceI AGGCCT 1 cut(s) 165
PciI ACATGT 2 cut(s) 759, 1365
PciSI GCTCTTC 1 cut(s) 1944
PctI GAATGC 3 cut(s) 603, 1299, 1753
PdmI GAANNNNTTC 1 cut(s) 1209
PfeI GAWTC 3 cut(s) 209, 358, 2045
PflFI GACNNNGTC 1 cut(s) 1433
PkrI GCNGC 8 cut(s) 25, 294, 322, 655, 793, 873, 1702, 2071
PscI ACATGT 2 cut(s) 759, 1365
PshBI ATTAAT 2 cut(s) 1385, 1508
Psp1406I AACGTT 1 cut(s) 1338
Psp6I CCWGG 3 cut(s) 633, 1094, 2251
PspEI GGTNACC 1 cut(s) 628
PspGI CCWGG 3 cut(s) 633, 1094, 2251
PspN4I GGNNCC 3 cut(s) 780, 1240, 2059
PspPI GGNCC 1 cut(s) 1792
PstNI CAGNNNCTG 1 cut(s) 23
PsyI GACNNNGTC 1 cut(s) 1433
RsaI GTAC 5 cut(s) 278, 545, 1067, 1370, 1786
RsaNI GTAC 5 cut(s) 277, 544, 1066, 1369, 1785
RseI CAYNNNNRTG 9 cut(s) 390, 510, 635, 699, 758, 1308, 1476, 1482, 1764
SapI GCTCTTC 1 cut(s) 1944
SatI GCNGC 8 cut(s) 24, 293, 321, 654, 792, 872, 1701, 2070
Sau3AI GATC 8 cut(s) 14, 56, 846, 863, 1060, 1086, 1359, 1714
Sau96I GGNCC 1 cut(s) 1792
ScrFI CCNGG 4 cut(s) 509, 635, 1096, 2253
SduI GDGCHC 4 cut(s) 116, 781, 967, 1956
SfaNI GCATC 5 cut(s) 382, 466, 897, 1117, 1761
SmiMI CAYNNNNRTG 9 cut(s) 390, 510, 635, 699, 758, 1308, 1476, 1482, 1764
SmlI CTYRAG 1 cut(s) 970
SmoI CTYRAG 1 cut(s) 970
SphI GCATGC 1 cut(s) 1481
SseBI AGGCCT 1 cut(s) 165
SsiI CCGC 2 cut(s) 292, 389
SspI AATATT 1 cut(s) 1497
SspMI CTAG 4 cut(s) 161, 1235, 2054, 2148
StuI AGGCCT 1 cut(s) 165
StyD4I CCNGG 4 cut(s) 507, 633, 1094, 2251
StyI CCWWGG 4 cut(s) 694, 1000, 1234, 2160
TaaI ACNGT 6 cut(s) 317, 455, 663, 1540, 1637, 1731
TaiI ACGT 2 cut(s) 332, 1341
TaqI TCGA 5 cut(s) 366, 376, 741, 1059, 1916
TaqII GACCGA 1 cut(s) 675
TatI WGTACW 2 cut(s) 1065, 1368
TauI GCSGC 1 cut(s) 295
TfiI GAWTC 3 cut(s) 209, 358, 2045
TscAI CASTG 4 cut(s) 322, 678, 1186, 1642
TseFI GTSAC 4 cut(s) 628, 1004, 1540, 1610
TseI GCWGC 7 cut(s) 23, 320, 653, 791, 871, 1700, 2069
Tsp45I GTSAC 4 cut(s) 628, 1004, 1540, 1610
TspGWI ACGGA 1 cut(s) 1802
TspRI CASTG 4 cut(s) 322, 678, 1186, 1642
Tth111I GACNNNGTC 1 cut(s) 1433
VspI ATTAAT 2 cut(s) 1385, 1508
XapI RAATTY 5 cut(s) 381, 1221, 1376, 1588, 2143
XceI RCATGY 4 cut(s) 763, 1369, 1481, 1763
XmaJI CCTAGG 1 cut(s) 1234
XmiI GTMKAC 1 cut(s) 524
XmnI GAANNNNTTC 1 cut(s) 1209
XspI CTAG 4 cut(s) 161, 1235, 2054, 2148
Zsp2I ATGCAT 2 cut(s) 1765, 1776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.