Rw0G015980

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00748
OG0011545
Physical Location & Seq
Reverse (-)
27372 .. 29728
2357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G015980.1

Sequence Viewer

Length: 2214 bp
ATGTCTCGGTTTGGATCAGTAGCTAACAGAATCCAGATTAGATCTTTCTCTAAATCACTTACAAAACACCCACTAGTTCCTCCATCTTCATCTTCAATTCCTTCGCACAAGTTCGCTTTTTTCTTGGACAATTGCTCAGACGCTTTCTCACTTAGAAAACTCCATGCTCGTATTCTTGCTCTGGGCGTCGGCAACCATATGTTCCTGGGCTCTAAACTTCTGAACTGCTATGCAAAGTTGGAACTTGTGTCAGAATCTAGATGGGTTTTCGATGCAATTGTCAATGGAAGTCTCTCTCTTTGGAACTCAATCCTTGTTGGGTATTACAGAACTGGTCACTTCCGTGAAGTTGTGAGGCGGTACATTCATTTGAGGCAGTGGAACATTGGGTTGGATAGTGCAGCCATTACGTTTGGTTGTAAGAGCTGTATTGAGTTGAGTAATTTGGAATTGGGTAGAGGAATCCATGCAGATGCATTCAAGTTTGGGTTGAATGCAAATGGGTTTGTGGGCTCGTCGCTTATTGGGTTGTACTGTGGGTGTGGGGATATTGGGGATGCGTATAAGGTGTTTGATGAAATTACTGACCCAGATGTTGTTGTGTACACTTCGATTATTACAGGGTATGCGCACATTGGCGATTTTCGGGCTTATGAGGCTTTCGAGATTGCTGGCCGAATGCAAAGGCAAGGTTTGCATCCTAATAGGGTCACCCTGGTGAGCTTACTTCAGGCAGCCTCACAGTTAGACGCACTCAAAGAAGGTCGTTCGGTCCATGGCTACGCTATTAGAAGAGGAATTGGTGCAGCCCTTGGAAGCTTTCCGCCTTTTCTGTCAAGTGATGCAAGAAAAATATGTTCCGGATTGATAACTTTCTCCAATGGGATTTTGTCTTGTGCTCACTTGAGTTATTTGCGTCAGGGAAAGAGTATCCATGGTCACCTAATTCGAGTTGGTGTTGAACTTGATCTAGTAGCAACCACTTCTCTGGTCGATTTGTACTCCAAATGCCACAAGTTGATCCAGGCCAGGGCATTATTTGATAGAATGGAGAAAAAGGATGCTATCTTTTACGATGTGATGATGGCTGGTTATCTGCACAATTATTTTGCTAGTGAAGCTATGGATATCTTTCTGGAAATGGTTGAAGGGGGAGTTAAACCAAACCTAGGTTCCATTTTGAGTGTACTTTCTGCAACTTCGGAACTGAAAGACATAAGAAAAGGCAAGTGCATTCATGGGTATGTAATAAGACATGGATTTGATTTGAATGTTGAAATTGCCAATCAGACCATCTACATGTACTCAAAATGTGGTTATATAGTCTGTGCGAGGCAAATCTTCAACAAGATAAGATATAGAGACTTGGTCTCATGGACTTCAATGATGATGGGTTATGTTCATCATGGGCATGCTGATGAAGCTATATTCTTGTTCCGATTAATGCAAAGGGAGCAGGTGGAAGATGATACAGTCGCACTGTTAACCTTGCTTCAGGCACTTTGTCAGCTTGGGTGTCTGAATCTAGTGAAGGAAGTCCACTGTCACTTGTATAGAGTTAATATAGACAATGAGATATCTCTCACCAATTCTTTGATTACTGCTTATTCTAAGTGTGGAAAGTTAAACATGGCTGCAAAACTTTTTGATCATGCAGTTAAACGGTGTCCTACTTCATGGAATGCAATGATACTTGCATATGGGATGCATGGAAAATGTATGGAGGCCCTCATGGTATTTGAACAGATGAAAAGTGAGAAAGTTGAGCCTGATGAGGTTACCTTTACATCAATTCTTACTGCTTGTAGCCATTCTGGCATGGTAAATGAGGGGCTGCGAGTCTTCAAGTCAATGGTTGACGATTTCTCTATAATCCCATGTGAAGAGCATTATGGTTGCATGGTAGATTTATTAAGCCGAGCAGGACTACTTGAAGAAGCATATAAACTGGTTAAATCCCTACCATCAAGGCTTCGTGGTTCTACACTAGGCACCTTGCTTGCAGCTTGTAAGTTACATGGAAATACAGAGATGGGGGAGGATTTAGGAAGGCGTCTCTTGGATTTAGAACCCAAGAATTCTAGTGCTTTTGCCATGGTTTCAAGTTTATATGCAGAAGGTGGAAAGTGGGGTGAAGTAGTCAGAATAAGAGCCACAGAAAAAGGGAGAGGTTTAAAAAGAACTCCAGGGTATAGTCTGATACAGGTAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

737

Amino Acids

81.94

Weight (kDa)

8.62

Isoelectric Point (pI)

34.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 197 - 245 1.8e-06 PPR repeat family
PPR_2 PF13041 455 - 503 4.4e-07 PPR repeat family
PPR PF01535 457 - 486 8.5e-07 PPR repeat
PPR_2 PF13041 559 - 603 5.9e-12 PPR repeat family
PPR PF01535 559 - 587 1.1e-06 PPR repeat
E_motif PF20431 673 - 735 1.4e-12 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1447
Acc16I TGCGCA 1 cut(s) 630
Acc36I ACCTGC 1 cut(s) 1447
AccB1I GGYRCC 1 cut(s) 1991
AccIII TCCGGA 1 cut(s) 860
AciI CCGC 2 cut(s) 358, 824
AclWI GGATC 2 cut(s) 22, 1015
AcoI YGGCCR 1 cut(s) 673
AcsI RAATTY 1 cut(s) 2077
AcuI CTGAAG 2 cut(s) 713, 1478
AcyI GRCGYC 2 cut(s) 186, 2053
AfaI GTAC 6 cut(s) 362, 533, 605, 1001, 1188, 1304
AfiI CCNNNNNNNGG 2 cut(s) 1030, 1169
AflIII ACRYGT 1 cut(s) 1299
AhlI ACTAGT 1 cut(s) 73
AjnI CCWGG 5 cut(s) 204, 714, 1023, 1028, 2185
AjuI GAANNNNNNNTTGG 4 cut(s) 374, 406, 1156, 1188
AleI CACNNNNGTG 2 cut(s) 342, 716
AluBI AGCT 8 cut(s) 23, 426, 723, 819, 1121, 1424, 1510, 2006
AluI AGCT 8 cut(s) 23, 426, 723, 819, 1121, 1424, 1510, 2006
Alw21I GWGCWC 1 cut(s) 901
Alw26I GTCTC 5 cut(s) 9, 296, 1356, 1375, 2060
AlwI GGATC 2 cut(s) 22, 1015
Aor13HI TCCGGA 1 cut(s) 860
AoxI GGCC 3 cut(s) 673, 1026, 1725
ApeKI GCWGC 6 cut(s) 401, 734, 806, 1634, 1834, 2003
ApoI RAATTY 1 cut(s) 2077
AseI ATTAAT 1 cut(s) 1442
AspA2I CCTAGG 1 cut(s) 1168
AspLEI GCGC 1 cut(s) 631
AspS9I GGNCC 2 cut(s) 772, 1726
AsuHPI GGTGA 5 cut(s) 703, 730, 932, 1576, 2144
AvaII GGWCC 1 cut(s) 772
AvrII CCTAGG 1 cut(s) 1168
BanI GGYRCC 1 cut(s) 1991
BanII GRGCYC 2 cut(s) 212, 515
BbsI GAAGAC 1 cut(s) 1834
Bbv12I GWGCWC 1 cut(s) 901
BbvI GCAGC 6 cut(s) 413, 746, 818, 1621, 1821, 2015
BccI CCATC 7 cut(s) 91, 255, 1078, 1301, 1384, 1972, 2026
BciT130I CCWGG 5 cut(s) 206, 716, 1025, 1030, 2187
BciVI GTATCC 1 cut(s) 941
BclI TGATCA 1 cut(s) 1648
BcoDI GTCTC 5 cut(s) 9, 296, 1356, 1375, 2060
BcuI ACTAGT 1 cut(s) 73
BfaI CTAG 8 cut(s) 74, 258, 971, 1113, 1169, 1526, 1988, 2082
BfuAI ACCTGC 1 cut(s) 1447
BfuI GTATCC 1 cut(s) 941
BglI GCCNNNNNGGC 1 cut(s) 1815
BglII AGATCT 1 cut(s) 41
BisI GCNGC 6 cut(s) 402, 735, 807, 1635, 1835, 2004
BlnI CCTAGG 1 cut(s) 1168
BlsI GCNGC 6 cut(s) 403, 736, 808, 1636, 1836, 2005
Bme1390I CCNGG 5 cut(s) 206, 716, 1025, 1030, 2187
Bme18I GGWCC 1 cut(s) 772
BmgT120I GGNCC 2 cut(s) 772, 1726
BmiI GGNNCC 2 cut(s) 1174, 1993
BmrFI CCNGG 5 cut(s) 206, 716, 1025, 1030, 2187
BmsI GCATC 7 cut(s) 262, 463, 547, 706, 832, 1051, 1695
BpiI GAAGAC 1 cut(s) 1834
BpmI CTGGAG 1 cut(s) 2169
BpuEI CTTGAG 1 cut(s) 925
BsaHI GRCGYC 2 cut(s) 186, 2053
BsaI GGTCTC 1 cut(s) 1375
BsaJI CCNNGG 9 cut(s) 205, 714, 775, 811, 934, 1029, 1168, 2094, 2186
BsaWI WCCGGW 1 cut(s) 860
Bsc4I CCNNNNNNNGG 2 cut(s) 1030, 1169
Bse1I ACTGG 2 cut(s) 337, 1953
Bse3DI GCAATG 1 cut(s) 1692
BseAI TCCGGA 1 cut(s) 860
BseBI CCWGG 5 cut(s) 206, 716, 1025, 1030, 2187
BseDI CCNNGG 9 cut(s) 205, 714, 775, 811, 934, 1029, 1168, 2094, 2186
BseGI GGATG 4 cut(s) 562, 697, 1066, 1710
BseLI CCNNNNNNNGG 2 cut(s) 1030, 1169
BseMI GCAATG 1 cut(s) 1692
BseMII CTCAG 1 cut(s) 150
BseNI ACTGG 2 cut(s) 337, 1953
BseXI GCAGC 6 cut(s) 413, 746, 818, 1621, 1821, 2015
BsgI GTGCAG 3 cut(s) 420, 825, 1082
BshFI GGCC 3 cut(s) 675, 1028, 1727
BshNI GGYRCC 1 cut(s) 1991
BsiHKAI GWGCWC 1 cut(s) 901
BsiSI CCGG 1 cut(s) 861
BslI CCNNNNNNNGG 2 cut(s) 1030, 1169
BsmAI GTCTC 5 cut(s) 9, 296, 1356, 1375, 2060
BsmBI CGTCTC 1 cut(s) 2060
BsmI GAATGC 5 cut(s) 476, 499, 684, 1233, 1687
BsnI GGCC 3 cut(s) 675, 1028, 1727
Bso31I GGTCTC 1 cut(s) 1375
Bsp1286I GDGCHC 3 cut(s) 212, 515, 901
Bsp13I TCCGGA 1 cut(s) 860
Bsp1407I TGTACA 1 cut(s) 603
Bsp143I GATC 5 cut(s) 14, 41, 967, 1020, 1648
Bsp19I CCATGG 3 cut(s) 775, 934, 2094
BspACI CCGC 2 cut(s) 358, 824
BspANI GGCC 3 cut(s) 675, 1028, 1727
BspCNI CTCAG 1 cut(s) 149
BspEI TCCGGA 1 cut(s) 860
BspLI GGNNCC 2 cut(s) 1174, 1993
BspMI ACCTGC 1 cut(s) 1447
BspPI GGATC 2 cut(s) 22, 1015
BspQI GCTCTTC 1 cut(s) 1878
BspT107I GGYRCC 1 cut(s) 1991
BspTNI GGTCTC 1 cut(s) 1375
BsrDI GCAATG 1 cut(s) 1692
BsrGI TGTACA 1 cut(s) 603
BsrI ACTGG 2 cut(s) 337, 1953
BssECI CCNNGG 9 cut(s) 205, 714, 775, 811, 934, 1029, 1168, 2094, 2186
BssMI GATC 5 cut(s) 14, 41, 967, 1020, 1648
BssNI GRCGYC 2 cut(s) 186, 2053
BssT1I CCWWGG 5 cut(s) 775, 811, 934, 1168, 2094
Bst2UI CCWGG 5 cut(s) 206, 716, 1025, 1030, 2187
Bst4CI ACNGT 6 cut(s) 536, 744, 1474, 1482, 1544, 1665
Bst6I CTCTTC 2 cut(s) 787, 1878
BstACI GRCGYC 2 cut(s) 186, 2053
BstAPI GCANNNNNTGC 1 cut(s) 694
BstAUI TGTACA 1 cut(s) 603
BstC8I GCNNGC 3 cut(s) 673, 1413, 2001
BstDEI CTNAG 3 cut(s) 136, 152, 1611
BstDSI CCRYGG 3 cut(s) 775, 934, 2094
BstEII GGTNACC 3 cut(s) 709, 938, 1777
BstF5I GGATG 4 cut(s) 562, 697, 1066, 1710
BstHHI GCGC 1 cut(s) 631
BstKTI GATC 5 cut(s) 17, 44, 970, 1023, 1651
BstMAI GTCTC 5 cut(s) 9, 296, 1356, 1375, 2060
BstMBI GATC 5 cut(s) 14, 41, 967, 1020, 1648
BstMWI GCNNNNNNNGC 6 cut(s) 656, 694, 1118, 1421, 1453, 1815
BstNI CCWGG 5 cut(s) 206, 716, 1025, 1030, 2187
BstNSI RCATGY 2 cut(s) 1303, 1415
BstPI GGTNACC 3 cut(s) 709, 938, 1777
BstSCI CCNGG 5 cut(s) 204, 714, 1023, 1028, 2185
BstV1I GCAGC 6 cut(s) 413, 746, 818, 1621, 1821, 2015
BstV2I GAAGAC 1 cut(s) 1834
BstX2I RGATCY 1 cut(s) 41
BstXI CCANNNNNNTGG 1 cut(s) 988
BstYI RGATCY 1 cut(s) 41
BsuI GTATCC 1 cut(s) 941
BsuRI GGCC 3 cut(s) 675, 1028, 1727
BtgI CCRYGG 3 cut(s) 775, 934, 2094
BtsCI GGATG 4 cut(s) 562, 697, 1066, 1710
BtsI GCAGTG 1 cut(s) 383
BtsIMutI CAGTG 3 cut(s) 383, 1478, 1540
BveI ACCTGC 1 cut(s) 1447
Cac8I GCNNGC 3 cut(s) 673, 1413, 2001
CfoI GCGC 1 cut(s) 631
Cfr13I GGNCC 2 cut(s) 772, 1726
CseI GACGC 5 cut(s) 149, 175, 758, 905, 2042
Csp6I GTAC 6 cut(s) 361, 532, 604, 1000, 1187, 1303
CviQI GTAC 6 cut(s) 361, 532, 604, 1000, 1187, 1303
DdeI CTNAG 3 cut(s) 136, 152, 1611
DpnI GATC 5 cut(s) 16, 43, 969, 1022, 1650
DpnII GATC 5 cut(s) 14, 41, 967, 1020, 1648
DraI TTTAAA 1 cut(s) 2175
EaeI YGGCCR 1 cut(s) 673
Eam1104I CTCTTC 2 cut(s) 787, 1878
EarI CTCTTC 2 cut(s) 787, 1878
EciI GGCGGA 1 cut(s) 813
Eco130I CCWWGG 5 cut(s) 775, 811, 934, 1168, 2094
Eco24I GRGCYC 2 cut(s) 212, 515
Eco31I GGTCTC 1 cut(s) 1375
Eco32I GATATC 2 cut(s) 1129, 1578
Eco47I GGWCC 1 cut(s) 772
Eco57I CTGAAG 2 cut(s) 713, 1478
Eco91I GGTNACC 3 cut(s) 709, 938, 1777
EcoO109I RGGNCCY 1 cut(s) 1726
EcoO65I GGTNACC 3 cut(s) 709, 938, 1777
EcoRI GAATTC 1 cut(s) 2077
EcoRII CCWGG 5 cut(s) 204, 714, 1023, 1028, 2185
EcoRV GATATC 2 cut(s) 1129, 1578
EcoT14I CCWWGG 5 cut(s) 775, 811, 934, 1168, 2094
EcoT22I ATGCAT 2 cut(s) 478, 1710
EcoT38I GRGCYC 2 cut(s) 212, 515
ErhI CCWWGG 5 cut(s) 775, 811, 934, 1168, 2094
Esp3I CGTCTC 1 cut(s) 2060
FauNDI CATATG 2 cut(s) 198, 1699
FbaI TGATCA 1 cut(s) 1648
Fnu4HI GCNGC 6 cut(s) 402, 735, 807, 1635, 1835, 2004
FokI GGATG 4 cut(s) 569, 684, 1073, 1717
FriOI GRGCYC 2 cut(s) 212, 515
Fsp4HI GCNGC 6 cut(s) 402, 735, 807, 1635, 1835, 2004
FspAI RTGCGCAY 1 cut(s) 630
FspBI CTAG 8 cut(s) 74, 258, 971, 1113, 1169, 1526, 1988, 2082
FspI TGCGCA 1 cut(s) 630
GlaI GCGC 1 cut(s) 630
GluI GCNGC 6 cut(s) 402, 735, 807, 1635, 1835, 2004
GsuI CTGGAG 1 cut(s) 2169
HaeIII GGCC 3 cut(s) 675, 1028, 1727
HapII CCGG 1 cut(s) 861
HgaI GACGC 5 cut(s) 149, 175, 758, 905, 2042
HhaI GCGC 1 cut(s) 631
Hin1I GRCGYC 2 cut(s) 186, 2053
Hin6I GCGC 1 cut(s) 629
HinP1I GCGC 1 cut(s) 629
HincII GTYRAC 2 cut(s) 1485, 1858
HindII GTYRAC 2 cut(s) 1485, 1858
HindIII AAGCTT 1 cut(s) 817
HinfI GANTC 5 cut(s) 30, 254, 462, 1522, 1839
HpaI GTTAAC 1 cut(s) 1485
HpaII CCGG 1 cut(s) 861
HphI GGTGA 5 cut(s) 703, 730, 932, 1576, 2144
Hpy166II GTNNAC 6 cut(s) 604, 606, 1187, 1485, 1540, 1858
Hpy188I TCNGA 9 cut(s) 139, 222, 253, 1204, 1290, 1439, 1521, 2144, 2199
Hpy188III TCNNGA 5 cut(s) 34, 258, 664, 861, 1136
Hpy8I GTNNAC 6 cut(s) 604, 606, 1187, 1485, 1540, 1858
Hpy99I CGWCG 2 cut(s) 191, 520
HpyAV CCTTC 6 cut(s) 111, 755, 1142, 1525, 2043, 2111
HpyCH4III ACNGT 6 cut(s) 536, 744, 1474, 1482, 1544, 1665
HpyCH4IV ACGT 1 cut(s) 410
HpyF10VI GCNNNNNNNGC 6 cut(s) 656, 694, 1118, 1421, 1453, 1815
HpyF3I CTNAG 3 cut(s) 136, 152, 1611
HpySE526I ACGT 1 cut(s) 410
Hsp92I GRCGYC 2 cut(s) 186, 2053
HspAI GCGC 1 cut(s) 629
Kpn2I TCCGGA 1 cut(s) 860
Ksp22I TGATCA 1 cut(s) 1648
KspAI GTTAAC 1 cut(s) 1485
Kzo9I GATC 5 cut(s) 14, 41, 967, 1020, 1648
LguI GCTCTTC 1 cut(s) 1878
LmnI GCTCC 1 cut(s) 1453
Lsp1109I GCAGC 6 cut(s) 413, 746, 818, 1621, 1821, 2015
LweI GCATC 7 cut(s) 262, 463, 547, 706, 832, 1051, 1695
MaeI CTAG 8 cut(s) 74, 258, 971, 1113, 1169, 1526, 1988, 2082
MaeII ACGT 1 cut(s) 410
MaeIII GTNAC 6 cut(s) 335, 709, 938, 1544, 1777, 2013
MalI GATC 5 cut(s) 16, 43, 969, 1022, 1650
MboI GATC 5 cut(s) 14, 41, 967, 1020, 1648
MboII GAAGA 8 cut(s) 78, 84, 804, 1333, 1475, 1834, 1895, 1946
MfeI CAATTG 2 cut(s) 130, 276
MflI RGATCY 1 cut(s) 41
MhlI GDGCHC 3 cut(s) 212, 515, 901
MlyI GAGTC 1 cut(s) 1848
MmeI TCCRAC 2 cut(s) 219, 372
Mph1103I ATGCAT 2 cut(s) 478, 1710
MroI TCCGGA 1 cut(s) 860
MslI CAYNNNNRTG 7 cut(s) 342, 471, 716, 1242, 1298, 1410, 1416
MspI CCGG 1 cut(s) 861
MspR9I CCNGG 5 cut(s) 206, 716, 1025, 1030, 2187
MunI CAATTG 2 cut(s) 130, 276
Mva1269I GAATGC 5 cut(s) 476, 499, 684, 1233, 1687
MvaI CCWGG 5 cut(s) 206, 716, 1025, 1030, 2187
MwoI GCNNNNNNNGC 6 cut(s) 656, 694, 1118, 1421, 1453, 1815
NcoI CCATGG 3 cut(s) 775, 934, 2094
NdeI CATATG 2 cut(s) 198, 1699
NdeII GATC 5 cut(s) 14, 41, 967, 1020, 1648
NlaIV GGNNCC 2 cut(s) 1174, 1993
NmeAIII GCCGAG 1 cut(s) 1943
NmuCI GTSAC 4 cut(s) 335, 709, 938, 1544
NsbI TGCGCA 1 cut(s) 630
NsiI ATGCAT 2 cut(s) 478, 1710
NspI RCATGY 2 cut(s) 1303, 1415
OliI CACNNNNGTG 2 cut(s) 342, 716
PaeI GCATGC 1 cut(s) 1415
PaqCI CACCTGC 1 cut(s) 1447
PciI ACATGT 1 cut(s) 1299
PciSI GCTCTTC 1 cut(s) 1878
PctI GAATGC 5 cut(s) 476, 499, 684, 1233, 1687
PfeI GAWTC 4 cut(s) 30, 254, 462, 1522
PflFI GACNNNGTC 1 cut(s) 1367
PkrI GCNGC 6 cut(s) 403, 736, 808, 1636, 1836, 2005
PleI GAGTC 1 cut(s) 1847
PpsI GAGTC 1 cut(s) 1847
PscI ACATGT 1 cut(s) 1299
PshBI ATTAAT 1 cut(s) 1442
Psp6I CCWGG 5 cut(s) 204, 714, 1023, 1028, 2185
PspEI GGTNACC 3 cut(s) 709, 938, 1777
PspGI CCWGG 5 cut(s) 204, 714, 1023, 1028, 2185
PspN4I GGNNCC 2 cut(s) 1174, 1993
PspPI GGNCC 2 cut(s) 772, 1726
PsuI RGATCY 1 cut(s) 41
PsyI GACNNNGTC 1 cut(s) 1367
RsaI GTAC 6 cut(s) 362, 533, 605, 1001, 1188, 1304
RsaNI GTAC 6 cut(s) 361, 532, 604, 1000, 1187, 1303
RseI CAYNNNNRTG 7 cut(s) 342, 471, 716, 1242, 1298, 1410, 1416
SapI GCTCTTC 1 cut(s) 1878
SatI GCNGC 6 cut(s) 402, 735, 807, 1635, 1835, 2004
Sau3AI GATC 5 cut(s) 14, 41, 967, 1020, 1648
Sau96I GGNCC 2 cut(s) 772, 1726
SchI GAGTC 1 cut(s) 1848
ScrFI CCNGG 5 cut(s) 206, 716, 1025, 1030, 2187
SduI GDGCHC 3 cut(s) 212, 515, 901
SfaNI GCATC 7 cut(s) 262, 463, 547, 706, 832, 1051, 1695
SinI GGWCC 1 cut(s) 772
SmiMI CAYNNNNRTG 7 cut(s) 342, 471, 716, 1242, 1298, 1410, 1416
SmlI CTYRAG 1 cut(s) 904
SmoI CTYRAG 1 cut(s) 904
SpeI ACTAGT 1 cut(s) 73
SphI GCATGC 1 cut(s) 1415
SsiI CCGC 2 cut(s) 358, 824
SspMI CTAG 8 cut(s) 74, 258, 971, 1113, 1169, 1526, 1988, 2082
StyD4I CCNGG 5 cut(s) 204, 714, 1023, 1028, 2185
StyI CCWWGG 5 cut(s) 775, 811, 934, 1168, 2094
TaaI ACNGT 6 cut(s) 536, 744, 1474, 1482, 1544, 1665
TaiI ACGT 1 cut(s) 413
TaqI TCGA 5 cut(s) 270, 611, 663, 949, 993
TaqII GACCGA 1 cut(s) 760
TatI WGTACW 5 cut(s) 531, 603, 999, 1186, 1302
TfiI GAWTC 4 cut(s) 30, 254, 462, 1522
TscAI CASTG 3 cut(s) 383, 1485, 1547
TseFI GTSAC 4 cut(s) 335, 709, 938, 1544
TseI GCWGC 6 cut(s) 401, 734, 806, 1634, 1834, 2003
Tsp45I GTSAC 4 cut(s) 335, 709, 938, 1544
TspDTI ATGAA 8 cut(s) 78, 356, 591, 1226, 1391, 1434, 1665, 1763
TspGWI ACGGA 1 cut(s) 332
TspRI CASTG 3 cut(s) 383, 1485, 1547
Tth111I GACNNNGTC 1 cut(s) 1367
VpaK11BI GGWCC 1 cut(s) 772
VspI ATTAAT 1 cut(s) 1442
XapI RAATTY 1 cut(s) 2077
XbaI TCTAGA 1 cut(s) 257
XceI RCATGY 2 cut(s) 1303, 1415
XmaJI CCTAGG 1 cut(s) 1168
XspI CTAG 8 cut(s) 74, 258, 971, 1113, 1169, 1526, 1988, 2082
Zsp2I ATGCAT 2 cut(s) 478, 1710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.