Rh1AG084800

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0011545
Physical Location & Seq
Forward (+)
14537410 .. 14541422
4013 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG084800.1

Sequence Viewer

Length: 2361 bp
ATGTCTCGGTTTGGATCAGTAGCTAACAGAATCCAGATTAGATCTTTCTCTAAATCACTTACAAAACACCCACTAGTTCCTCCATCTTCATCTTCAATTCCTTCGGACAAGTTCGCTTTTTTCTTGGACAATTGCTCAGACGCTTTCTCACTTAGAAAACTCCATGCTCGTATTCTTGCTCTGGGCCTCGGCAACCATATGTTCCTGGGCTCTAAACTTCTGAACTGCTATGCAAAGTTGGAACTTGTGTCAGAATCTAGATGGGTTTTCGATGCAATTGTCAATGGAAGTCTCTCTCTTTGGAACTCAATCCTTGTTGGGTATTACAGAACTGGTCACTTCCGTGAAGTTGTGAGGCGGTACATTCATTTGAGGCAATGCAACATTGGGTTGGATAGTGCAGCCATTACGTTTGGTTGTAAGAGCTGTATTGAGTTGAGTAATTTGGAATTGGGTAGAGGAATCCATGCAGATGCATTCAAGTTTGGGTTGAATGCAAGTGGGTTTGTAGGTTCGTCGCTTATTGGGTTGTACTGTGGGTGTGGGGATATTGGGGATGCGTATAAGGTGTTTGATGAAATTACTGACCCAGATGTTGTTGTGTACACTTCGATTATTACAGGGTATGCTCACATTGGTGATTTTCGGGCTTATGAGGCTTTCGAGATTGCTGGCCGAATGCAAAGGCAAGGTTTGCATCCTAATAGGGTCACCCTGGTGAGCTTACTTCAGGCAGCCTCACAGTTAGACGCACTCAAAGAAGGTCGTTCGGTCCATGGCTACGCTATTAGAAGAGGAATTGCTGGTTTTGATGAAGTATTTGAAACAAGTCTCATGGACATGTATAACAAGTGTGGGGCACCTAAAATGGCAGCCTGCATTTTTGGCAAGATGAAGAAAAAGACAATTGGTTTGTGGAATGTGATGATTGCAGGTTATCTGAAATCCGAGCAGCCCTTGGAAGCTTTCCGCCTTTTCTTTCAAGTGATGCAAGAAAAATATGTTCCGGATTTGATAACTTTCTCCAATGGGATCTTGTCTTGTGCTCACTTGAGTTATTTGCGTCAGGGAAAGAGTATCCATGGTCACCTAATTCGAGTTGGTGTTGAACTTGATCTAGTAGCAACCACTTCTCTGGTCGATTTGTACTCCAAATGCCACAAGTTGATCCAGGCCAGGGCATTATTTGATAGAATGGAGAAAAGGGATGCTATCTTTTACGATGTGATGATGGCTGGTTATCTGCACAATTATTTTGCTAGTGAAGCTATGGATATCTTTCTGGAAATGGTTGGAGGGGGAGTTAAACCAAACCTAGGTTCCATTTTGAGTGTACTTTCTGCAACTTCGGAACTGAAAGACATAAGAAAAGGCAAGTGCATTCATGGGTATGTAATAAGACATGGATTTGATTTGAATGTTGAAATTGCCAATCAGACCATCTACATGTACTCAAAATGTGGTTATATAGTCTGTGCGAGGCAAATCTTCAACAAGATAAGATATAGAGACTTGGTCTCATGGACTTCAATGATGATGGGTTATGTTCATCATGGGCATGCTGATGAAGCTATATTCTTGTTCCGATTAATGCAAAGGAAGCAGGTGGAAGATGATACAGTCACGCTGTTAACCTTGCTTCAGGCACTTTGTCAGCTTGGGTGTCTGAATCTAGTGAAGGAAGTCCACTGTCACTTGTATAGAGTTAATATAGACAATGAGATATCTCTCACCAATTCTTTGATTACTGCTTATTCTAAGTGTGGAAAGTTAAACATGGCTGCAAATCTTTTTGATCATGCAGTTAAACGGTGTCCTACTTCATGGAATGCAATGATACTTGCATATGGGATGCATGGAAAATGTATGGAGGCCCTCATGGTATTTGAACAGATGAAAAGTGAGAAAGTTGAGCCTGATGAGGTTACCTTTACATCAATTCTTACTGCTTGTAGCCATTCTGGCATGGTAAATGAGGGGCTGCGAGTCTTCAAGTCAATGGTTGAGGATTTCTCTATAATCCCATGTGAAGAGCATTATGGTTGCATGGTAGATTTATTAAGCCGAGCAGGACTACTTGAAGAAGCATATAAACTGGTTAAATCCCTACCATCAAGGCTTCGTGGTTCTACACTAGGCACCTTGCTTGCAGCTTGTAAGTTACATGGAAATACAGAGATGGGGGAGGATTTAGGAAGGCGTCTCTTGGATTTAGAGCCCAAGAATTCTAGTGCTTTTGCCATGGTTTCAAGTTTATATGCAGAAGGTGGAAAGTGGGGTGAAGTAGTCAGAATAAGAGCCACAGAAAAAGGGAGAGGTTTAAAAAGAACTCCAGGGTATAGTCTGATACAGGTAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

786

Amino Acids

87.77

Weight (kDa)

8.62

Isoelectric Point (pI)

35.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 197 - 245 2e-06 PPR repeat family
PPR_2 PF13041 504 - 552 5e-09 PPR repeat family
PPR PF01535 506 - 535 6.2e-07 PPR repeat
PPR_2 PF13041 608 - 652 6.4e-12 PPR repeat family
PPR PF01535 608 - 636 1.2e-06 PPR repeat
E_motif PF20431 722 - 784 1.5e-12 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1594
Acc36I ACCTGC 2 cut(s) 923, 1594
AccB1I GGYRCC 2 cut(s) 859, 2138
AccIII TCCGGA 1 cut(s) 1006
AciI CCGC 2 cut(s) 358, 970
AclWI GGATC 3 cut(s) 22, 1040, 1162
AcoI YGGCCR 1 cut(s) 673
AcsI RAATTY 1 cut(s) 2224
AcuI CTGAAG 2 cut(s) 713, 1625
AcyI GRCGYC 1 cut(s) 2200
AfaI GTAC 6 cut(s) 362, 533, 605, 1148, 1335, 1451
AfiI CCNNNNNNNGG 2 cut(s) 1177, 1316
AflIII ACRYGT 2 cut(s) 840, 1446
AhlI ACTAGT 1 cut(s) 73
AjnI CCWGG 5 cut(s) 204, 714, 1170, 1175, 2332
AjuI GAANNNNNNNTTGG 2 cut(s) 1303, 1335
AleI CACNNNNGTG 3 cut(s) 342, 636, 716
AluBI AGCT 8 cut(s) 23, 426, 723, 965, 1268, 1571, 1657, 2153
AluI AGCT 8 cut(s) 23, 426, 723, 965, 1268, 1571, 1657, 2153
Alw21I GWGCWC 1 cut(s) 1048
Alw26I GTCTC 6 cut(s) 9, 296, 836, 1503, 1522, 2207
AlwI GGATC 3 cut(s) 22, 1040, 1162
Aor13HI TCCGGA 1 cut(s) 1006
AoxI GGCC 4 cut(s) 184, 673, 1173, 1872
ApeKI GCWGC 7 cut(s) 401, 734, 872, 952, 1781, 1981, 2150
ApoI RAATTY 1 cut(s) 2224
ArsI GACNNNNNNTTYG 2 cut(s) 895, 927
AseI ATTAAT 1 cut(s) 1589
AspA2I CCTAGG 1 cut(s) 1315
AspS9I GGNCC 3 cut(s) 184, 772, 1873
AsuHPI GGTGA 6 cut(s) 650, 703, 730, 1079, 1723, 2291
AvaII GGWCC 1 cut(s) 772
AvrII CCTAGG 1 cut(s) 1315
BaeGI GKGCMC 1 cut(s) 862
BanI GGYRCC 2 cut(s) 859, 2138
BanII GRGCYC 2 cut(s) 212, 2220
BbsI GAAGAC 1 cut(s) 1981
Bbv12I GWGCWC 1 cut(s) 1048
BbvI GCAGC 7 cut(s) 413, 746, 884, 964, 1768, 1968, 2162
BccI CCATC 7 cut(s) 91, 255, 1225, 1448, 1531, 2119, 2173
BciT130I CCWGG 5 cut(s) 206, 716, 1172, 1177, 2334
BciVI GTATCC 1 cut(s) 1088
BclI TGATCA 1 cut(s) 1795
BcoDI GTCTC 6 cut(s) 9, 296, 836, 1503, 1522, 2207
BcuI ACTAGT 1 cut(s) 73
BfaI CTAG 8 cut(s) 74, 258, 1118, 1260, 1316, 1673, 2135, 2229
BfuAI ACCTGC 2 cut(s) 923, 1594
BfuI GTATCC 1 cut(s) 1088
BglI GCCNNNNNGGC 1 cut(s) 1962
BglII AGATCT 1 cut(s) 41
BisI GCNGC 7 cut(s) 402, 735, 873, 953, 1782, 1982, 2151
BlnI CCTAGG 1 cut(s) 1315
BlsI GCNGC 7 cut(s) 403, 736, 874, 954, 1783, 1983, 2152
Bme1390I CCNGG 5 cut(s) 206, 716, 1172, 1177, 2334
Bme18I GGWCC 1 cut(s) 772
BmgT120I GGNCC 3 cut(s) 184, 772, 1873
BmiI GGNNCC 3 cut(s) 861, 1321, 2140
BmrFI CCNGG 5 cut(s) 206, 716, 1172, 1177, 2334
BmsI GCATC 7 cut(s) 262, 463, 547, 706, 978, 1198, 1842
BpiI GAAGAC 1 cut(s) 1981
BplI GAGNNNNNCTC 2 cut(s) 1997, 2029
BpmI CTGGAG 1 cut(s) 2316
BpuEI CTTGAG 1 cut(s) 1072
BsaHI GRCGYC 1 cut(s) 2200
BsaI GGTCTC 1 cut(s) 1522
BsaWI WCCGGW 1 cut(s) 1006
BsaXI ACNNNNNCTCC 2 cut(s) 1287, 1317
Bsc4I CCNNNNNNNGG 2 cut(s) 1177, 1316
Bse1I ACTGG 2 cut(s) 337, 2100
Bse3DI GCAATG 2 cut(s) 383, 1839
BseAI TCCGGA 1 cut(s) 1006
BseBI CCWGG 5 cut(s) 206, 716, 1172, 1177, 2334
BseGI GGATG 4 cut(s) 562, 697, 1213, 1857
BseLI CCNNNNNNNGG 2 cut(s) 1177, 1316
BseMI GCAATG 2 cut(s) 383, 1839
BseMII CTCAG 1 cut(s) 150
BseNI ACTGG 2 cut(s) 337, 2100
BseSI GKGCMC 1 cut(s) 862
BseXI GCAGC 7 cut(s) 413, 746, 884, 964, 1768, 1968, 2162
BsgI GTGCAG 2 cut(s) 420, 1229
BshFI GGCC 4 cut(s) 186, 675, 1175, 1874
BshNI GGYRCC 2 cut(s) 859, 2138
BsiHKAI GWGCWC 1 cut(s) 1048
BsiSI CCGG 1 cut(s) 1007
BslI CCNNNNNNNGG 2 cut(s) 1177, 1316
BsmAI GTCTC 6 cut(s) 9, 296, 836, 1503, 1522, 2207
BsmBI CGTCTC 1 cut(s) 2207
BsmI GAATGC 5 cut(s) 476, 499, 684, 1380, 1834
BsnI GGCC 4 cut(s) 186, 675, 1175, 1874
Bso31I GGTCTC 1 cut(s) 1522
Bsp1286I GDGCHC 4 cut(s) 212, 862, 1048, 2220
Bsp13I TCCGGA 1 cut(s) 1006
Bsp1407I TGTACA 1 cut(s) 603
Bsp143I GATC 6 cut(s) 14, 41, 1032, 1114, 1167, 1795
Bsp19I CCATGG 3 cut(s) 775, 1081, 2241
BspACI CCGC 2 cut(s) 358, 970
BspANI GGCC 4 cut(s) 186, 675, 1175, 1874
BspCNI CTCAG 1 cut(s) 149
BspEI TCCGGA 1 cut(s) 1006
BspLI GGNNCC 3 cut(s) 861, 1321, 2140
BspMI ACCTGC 2 cut(s) 923, 1594
BspPI GGATC 3 cut(s) 22, 1040, 1162
BspQI GCTCTTC 1 cut(s) 2025
BspT107I GGYRCC 2 cut(s) 859, 2138
BspTNI GGTCTC 1 cut(s) 1522
BsrDI GCAATG 2 cut(s) 383, 1839
BsrGI TGTACA 1 cut(s) 603
BsrI ACTGG 2 cut(s) 337, 2100
BssMI GATC 6 cut(s) 14, 41, 1032, 1114, 1167, 1795
BssNI GRCGYC 1 cut(s) 2200
BssT1I CCWWGG 5 cut(s) 775, 957, 1081, 1315, 2241
Bst2UI CCWGG 5 cut(s) 206, 716, 1172, 1177, 2334
Bst4CI ACNGT 5 cut(s) 536, 744, 1621, 1691, 1812
Bst6I CTCTTC 2 cut(s) 787, 2025
BstACI GRCGYC 1 cut(s) 2200
BstAPI GCANNNNNTGC 1 cut(s) 694
BstAUI TGTACA 1 cut(s) 603
BstC8I GCNNGC 4 cut(s) 673, 877, 1560, 2148
BstDEI CTNAG 3 cut(s) 136, 152, 1758
BstDSI CCRYGG 3 cut(s) 775, 1081, 2241
BstEII GGTNACC 3 cut(s) 709, 1085, 1924
BstF5I GGATG 4 cut(s) 562, 697, 1213, 1857
BstKTI GATC 6 cut(s) 17, 44, 1035, 1117, 1170, 1798
BstMAI GTCTC 6 cut(s) 9, 296, 836, 1503, 1522, 2207
BstMBI GATC 6 cut(s) 14, 41, 1032, 1114, 1167, 1795
BstMWI GCNNNNNNNGC 7 cut(s) 656, 694, 885, 1265, 1568, 1600, 1962
BstNI CCWGG 5 cut(s) 206, 716, 1172, 1177, 2334
BstNSI RCATGY 3 cut(s) 844, 1450, 1562
BstPI GGTNACC 3 cut(s) 709, 1085, 1924
BstSCI CCNGG 5 cut(s) 204, 714, 1170, 1175, 2332
BstSLI GKGCMC 1 cut(s) 862
BstV1I GCAGC 7 cut(s) 413, 746, 884, 964, 1768, 1968, 2162
BstV2I GAAGAC 1 cut(s) 1981
BstX2I RGATCY 2 cut(s) 41, 1032
BstXI CCANNNNNNTGG 1 cut(s) 1135
BstYI RGATCY 2 cut(s) 41, 1032
BsuI GTATCC 1 cut(s) 1088
BsuRI GGCC 4 cut(s) 186, 675, 1175, 1874
BtgI CCRYGG 3 cut(s) 775, 1081, 2241
BtsCI GGATG 4 cut(s) 562, 697, 1213, 1857
BtsIMutI CAGTG 1 cut(s) 1687
BveI ACCTGC 2 cut(s) 923, 1594
Cac8I GCNNGC 4 cut(s) 673, 877, 1560, 2148
Cfr13I GGNCC 3 cut(s) 184, 772, 1873
CseI GACGC 4 cut(s) 149, 758, 1052, 2189
Csp6I GTAC 6 cut(s) 361, 532, 604, 1147, 1334, 1450
CviQI GTAC 6 cut(s) 361, 532, 604, 1147, 1334, 1450
DdeI CTNAG 3 cut(s) 136, 152, 1758
DpnI GATC 6 cut(s) 16, 43, 1034, 1116, 1169, 1797
DpnII GATC 6 cut(s) 14, 41, 1032, 1114, 1167, 1795
DraI TTTAAA 1 cut(s) 2322
EaeI YGGCCR 1 cut(s) 673
Eam1104I CTCTTC 2 cut(s) 787, 2025
EarI CTCTTC 2 cut(s) 787, 2025
EciI GGCGGA 1 cut(s) 959
Eco130I CCWWGG 5 cut(s) 775, 957, 1081, 1315, 2241
Eco24I GRGCYC 2 cut(s) 212, 2220
Eco31I GGTCTC 1 cut(s) 1522
Eco32I GATATC 2 cut(s) 1276, 1725
Eco47I GGWCC 1 cut(s) 772
Eco57I CTGAAG 2 cut(s) 713, 1625
Eco91I GGTNACC 3 cut(s) 709, 1085, 1924
EcoO109I RGGNCCY 1 cut(s) 1873
EcoO65I GGTNACC 3 cut(s) 709, 1085, 1924
EcoRI GAATTC 1 cut(s) 2224
EcoRII CCWGG 5 cut(s) 204, 714, 1170, 1175, 2332
EcoRV GATATC 2 cut(s) 1276, 1725
EcoT14I CCWWGG 5 cut(s) 775, 957, 1081, 1315, 2241
EcoT22I ATGCAT 2 cut(s) 478, 1857
EcoT38I GRGCYC 2 cut(s) 212, 2220
ErhI CCWWGG 5 cut(s) 775, 957, 1081, 1315, 2241
Esp3I CGTCTC 1 cut(s) 2207
FauNDI CATATG 2 cut(s) 198, 1846
FbaI TGATCA 1 cut(s) 1795
Fnu4HI GCNGC 7 cut(s) 402, 735, 873, 953, 1782, 1982, 2151
FokI GGATG 4 cut(s) 569, 684, 1220, 1864
FriOI GRGCYC 2 cut(s) 212, 2220
Fsp4HI GCNGC 7 cut(s) 402, 735, 873, 953, 1782, 1982, 2151
FspBI CTAG 8 cut(s) 74, 258, 1118, 1260, 1316, 1673, 2135, 2229
GluI GCNGC 7 cut(s) 402, 735, 873, 953, 1782, 1982, 2151
GsuI CTGGAG 1 cut(s) 2316
HaeIII GGCC 4 cut(s) 186, 675, 1175, 1874
HapII CCGG 1 cut(s) 1007
HgaI GACGC 4 cut(s) 149, 758, 1052, 2189
Hin1I GRCGYC 1 cut(s) 2200
HincII GTYRAC 1 cut(s) 1632
HindII GTYRAC 1 cut(s) 1632
HindIII AAGCTT 1 cut(s) 963
HinfI GANTC 5 cut(s) 30, 254, 462, 1669, 1986
HpaI GTTAAC 1 cut(s) 1632
HpaII CCGG 1 cut(s) 1007
HphI GGTGA 6 cut(s) 650, 703, 730, 1079, 1723, 2291
Hpy166II GTNNAC 5 cut(s) 604, 606, 1334, 1632, 1687
Hpy188III TCNNGA 5 cut(s) 34, 258, 664, 1007, 1283
Hpy8I GTNNAC 5 cut(s) 604, 606, 1334, 1632, 1687
Hpy99I CGWCG 1 cut(s) 520
HpyAV CCTTC 5 cut(s) 111, 755, 1672, 2190, 2258
HpyCH4III ACNGT 5 cut(s) 536, 744, 1621, 1691, 1812
HpyCH4IV ACGT 1 cut(s) 410
HpyF10VI GCNNNNNNNGC 7 cut(s) 656, 694, 885, 1265, 1568, 1600, 1962
HpyF3I CTNAG 3 cut(s) 136, 152, 1758
HpySE526I ACGT 1 cut(s) 410
Hsp92I GRCGYC 1 cut(s) 2200
Kpn2I TCCGGA 1 cut(s) 1006
Ksp22I TGATCA 1 cut(s) 1795
KspAI GTTAAC 1 cut(s) 1632
Kzo9I GATC 6 cut(s) 14, 41, 1032, 1114, 1167, 1795
LguI GCTCTTC 1 cut(s) 2025
Lsp1109I GCAGC 7 cut(s) 413, 746, 884, 964, 1768, 1968, 2162
LweI GCATC 7 cut(s) 262, 463, 547, 706, 978, 1198, 1842
MaeI CTAG 8 cut(s) 74, 258, 1118, 1260, 1316, 1673, 2135, 2229
MaeII ACGT 1 cut(s) 410
MaeIII GTNAC 7 cut(s) 335, 709, 1085, 1621, 1691, 1924, 2160
MalI GATC 6 cut(s) 16, 43, 1034, 1116, 1169, 1797
MboI GATC 6 cut(s) 14, 41, 1032, 1114, 1167, 1795
MboII GAAGA 9 cut(s) 78, 84, 804, 907, 1480, 1622, 1981, 2042, 2093
MfeI CAATTG 3 cut(s) 130, 276, 906
MflI RGATCY 2 cut(s) 41, 1032
MhlI GDGCHC 4 cut(s) 212, 862, 1048, 2220
MlyI GAGTC 1 cut(s) 1995
MmeI TCCRAC 3 cut(s) 219, 372, 1273
Mph1103I ATGCAT 2 cut(s) 478, 1857
MroI TCCGGA 1 cut(s) 1006
MslI CAYNNNNRTG 9 cut(s) 342, 471, 636, 716, 839, 1389, 1445, 1557, 1563
MspI CCGG 1 cut(s) 1007
MspR9I CCNGG 5 cut(s) 206, 716, 1172, 1177, 2334
MunI CAATTG 3 cut(s) 130, 276, 906
Mva1269I GAATGC 5 cut(s) 476, 499, 684, 1380, 1834
MvaI CCWGG 5 cut(s) 206, 716, 1172, 1177, 2334
MwoI GCNNNNNNNGC 7 cut(s) 656, 694, 885, 1265, 1568, 1600, 1962
NcoI CCATGG 3 cut(s) 775, 1081, 2241
NdeI CATATG 2 cut(s) 198, 1846
NdeII GATC 6 cut(s) 14, 41, 1032, 1114, 1167, 1795
NlaIV GGNNCC 3 cut(s) 861, 1321, 2140
NmeAIII GCCGAG 2 cut(s) 168, 2090
NmuCI GTSAC 5 cut(s) 335, 709, 1085, 1621, 1691
NsiI ATGCAT 2 cut(s) 478, 1857
NspI RCATGY 3 cut(s) 844, 1450, 1562
OliI CACNNNNGTG 3 cut(s) 342, 636, 716
PaeI GCATGC 1 cut(s) 1562
PaqCI CACCTGC 1 cut(s) 1594
PciI ACATGT 2 cut(s) 840, 1446
PciSI GCTCTTC 1 cut(s) 2025
PctI GAATGC 5 cut(s) 476, 499, 684, 1380, 1834
PfeI GAWTC 4 cut(s) 30, 254, 462, 1669
PflFI GACNNNGTC 1 cut(s) 1514
PkrI GCNGC 7 cut(s) 403, 736, 874, 954, 1783, 1983, 2152
PleI GAGTC 1 cut(s) 1994
PpsI GAGTC 1 cut(s) 1994
PscI ACATGT 2 cut(s) 840, 1446
PshBI ATTAAT 1 cut(s) 1589
Psp6I CCWGG 5 cut(s) 204, 714, 1170, 1175, 2332
PspEI GGTNACC 3 cut(s) 709, 1085, 1924
PspGI CCWGG 5 cut(s) 204, 714, 1170, 1175, 2332
PspN4I GGNNCC 3 cut(s) 861, 1321, 2140
PspPI GGNCC 3 cut(s) 184, 772, 1873
PsuI RGATCY 2 cut(s) 41, 1032
PsyI GACNNNGTC 1 cut(s) 1514
RsaI GTAC 6 cut(s) 362, 533, 605, 1148, 1335, 1451
RsaNI GTAC 6 cut(s) 361, 532, 604, 1147, 1334, 1450
RseI CAYNNNNRTG 9 cut(s) 342, 471, 636, 716, 839, 1389, 1445, 1557, 1563
SapI GCTCTTC 1 cut(s) 2025
SatI GCNGC 7 cut(s) 402, 735, 873, 953, 1782, 1982, 2151
Sau3AI GATC 6 cut(s) 14, 41, 1032, 1114, 1167, 1795
Sau96I GGNCC 3 cut(s) 184, 772, 1873
SchI GAGTC 1 cut(s) 1995
ScrFI CCNGG 5 cut(s) 206, 716, 1172, 1177, 2334
SduI GDGCHC 4 cut(s) 212, 862, 1048, 2220
SfaNI GCATC 7 cut(s) 262, 463, 547, 706, 978, 1198, 1842
SinI GGWCC 1 cut(s) 772
SmiMI CAYNNNNRTG 9 cut(s) 342, 471, 636, 716, 839, 1389, 1445, 1557, 1563
SmlI CTYRAG 1 cut(s) 1051
SmoI CTYRAG 1 cut(s) 1051
SpeI ACTAGT 1 cut(s) 73
SphI GCATGC 1 cut(s) 1562
SsiI CCGC 2 cut(s) 358, 970
SspMI CTAG 8 cut(s) 74, 258, 1118, 1260, 1316, 1673, 2135, 2229
StyD4I CCNGG 5 cut(s) 204, 714, 1170, 1175, 2332
StyI CCWWGG 5 cut(s) 775, 957, 1081, 1315, 2241
TaaI ACNGT 5 cut(s) 536, 744, 1621, 1691, 1812
TaiI ACGT 1 cut(s) 413
TaqI TCGA 5 cut(s) 270, 611, 663, 1096, 1140
TaqII GACCGA 1 cut(s) 760
TatI WGTACW 5 cut(s) 531, 603, 1146, 1333, 1449
TfiI GAWTC 4 cut(s) 30, 254, 462, 1669
TscAI CASTG 1 cut(s) 1694
TseFI GTSAC 5 cut(s) 335, 709, 1085, 1621, 1691
TseI GCWGC 7 cut(s) 401, 734, 872, 952, 1781, 1981, 2150
Tsp45I GTSAC 5 cut(s) 335, 709, 1085, 1621, 1691
TspGWI ACGGA 1 cut(s) 332
TspRI CASTG 1 cut(s) 1694
Tth111I GACNNNGTC 1 cut(s) 1514
VpaK11BI GGWCC 1 cut(s) 772
VspI ATTAAT 1 cut(s) 1589
XapI RAATTY 1 cut(s) 2224
XbaI TCTAGA 1 cut(s) 257
XceI RCATGY 3 cut(s) 844, 1450, 1562
XmaJI CCTAGG 1 cut(s) 1315
XspI CTAG 8 cut(s) 74, 258, 1118, 1260, 1316, 1673, 2135, 2229
Zsp2I ATGCAT 2 cut(s) 478, 1857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.