Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0011545

Physical Location & Seq

Genomic Coordinates Reverse (-)

52779670 .. 52782839

Gene Structure 3170 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029988

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGTCTCGGTTTGGATCAGTAGCTAACAGAATCCATATTAGATCTTTCTCTAAATCACTTACAAAACACCCACTAGTTCCTTCATCTTCAATTCCTTCAGACAAGTTCGCTTTTTTCTTGGACAATTGCTCAGACGCTTTCTCACTTAGAAAACTCCATGCTCGTATTCTTGCTCTGGGCCTCGGCAACCATATCTTTCTGGGCTCTAAACTTCTGAATTGCTATGCGAAGTTGGAACTTGTGTCAGAATCTAGATGGGTTTTCGATGCAATTGTCAATGGAAGTCTCTCTCTTGGGAACTCAATCCTCGTTGGGTATTACAGAACTGGTCACTTCCGTGAAGTTGTGAGGCGGTACATTCATTTGAGGCAGTGGAACATTGGGTTGGATAGTGCAGCCATTACGTTTGGTTGTAAGAGCTGTATTGAGTTGAGTACTTTGGAATTGGGTAGAGGAATCCATGTAGATGCATTCAAGTTTGGGTTGAATGCAAATGGGTTTGTGGGTTCGTCGCTTATTGGGTTGTACTGTGGGTGTGGGGATATTGGGGATGCGCATAAGGTGTTTGATGAAATTACTGACCCAGATGTTGTTGTGTACACTTCCATTATTACGGGGTATGCTCACATTGGTGATTTTCGGGCTTATGAGGCTTTCGAGATTGCTGGCCGAATGCAAAGGCAAGGTTTGCATCCTAATAGGGTCACCCTGGTGAGCTTACTTCAGGCAGCCTCACAGTTAGACGCACTCAAAGAAGGTCGTTCGGTCCATGGCTACGCTATTAGAAGAGGAATTGGTGGTTTTGATGAAGTGTTTGAAACAAGTCTCATGGACATGTATAACAAGTGTGGGGCACCTAAAATGGCAGCCTGCATTTTTGGCAAGATGAAGAAAAAGACAATTGGTTTGTGGAATGTGATGATTGCAGGTTATCTTAAATCGGAGCAGCCCTTGGAAGCTTTCCGCCTTTTCTGTCAAGTGATGCAAGTAAAATATGTTCCGGATTTGATAACTTTCTCCAATGGGATTTTGTCTTGTGCTCACTTGAGTTATTTGCGTCAGGGAAAGAGTATCCATGGTCACGTAATTCGAGTTGGTGTTGAACTTGATCTAGTAGCAACCACTTCTCTGGTCGATTTGTACTCCAAATGCCACAAGTTGATCCAAGCCAGGGCATTATTTGATAGAATGGAGAAAAAGGATGCTATCTTTTATGATGTGATGATGGCTGGTTATCTGCACAATTATTTTGCTAGTGAAGCTATGGATATCTTTCTGGAAATGGTTGGAGGGGGAATTAAACCAAACCTAGGTTCCATTTTGAGTGTACTTTCTGCAACTTCGGAACTGAAAGACATAAGAAAAGGCAAGTGCATTCATGGGTATGTAATAAGACATGGATTGGATTTGAATGTTGAAATTGCCAATCAGACCATCTACATGTACTCAAAATGTGGTCATATGGTCTGTGCAAGGCAAATCTTCAAGAAGATAAGATATAGAGACTTGATCTCATGGACTTCAATGATGATGGGTTATGTTCATCATGGGCATGCTGATGAAGCTATATTCTTGTTCCGATTAATGCAAAGGGAGCGGGTGGAAGATGATACAGTCGCGCTGTTAACCTTGCTTCAGGCACTTTGGCAGCTTGGGTGTCTGAATCTAGTGAAGGAAGTCCACAGTCACTTGTATAGAGTTAATATAGACAATGAGATATCTCTCACCAATTCTTTGATTACTGCTTATTCTAAGTGTGGAAAGTTAAACATGGCTGCAAATCTTTTTGATCATGCAGTTAAACGGTGTCCTACTTCATGGAATGCAATGATACTTGCATATGGGATGCATGGAAAATGTATGGAGGCCCTCATGGTATTTGAACAGATGAAAAGTGAGAAAGTTGAGCCTGATGAGGTTACCTTTACATCAATTCTTACTGCTTGTAGCCATTCTGGCAAGGTAAATGAGGGGCTGCGAGTCTTCAAGTCAATGGTTGAGGATTTCTCTATAATCCCATGTGAACAGCATTATGGTTGCATGGTAGATTTATTGAGCAGAGCAGGACTACTTGAAGAAGCATATAAACTGGTTAAATCCCTACCATCAAGGCTTCGTGGTTCTACACTAGGCACCTTGCTTGCAGCTTGTAAGTTACATGGAAATACAGAGATGGGGGAGGATTTAGGAAGGTGTCTCTTGGATTTAGAACCCAAGAATTCTAGTGCTTTTGCCATGGTTTCAAGTTTATATGCAGAAGGTGGAAAGTGGGGTGAAGTAGTCAGAATAAGAGCCACAGAAAAAGGGAGAGGTTTAAAAAGAACTCCAGGGTATAGTCTGATACAGAACAACTCTTGCCAGAGAAGTGAATGGAATTTGCCTGAGCAGGGCCTGTGTAGTATGATGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

804

Amino Acids

89.65

Weight (kDa)

8.66

Isoelectric Point (pI)

35.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	195 - 243	2e-06	PPR repeat family
PPR	PF01535	504 - 533	1.6e-06	PPR repeat
PPR_2	PF13041	606 - 650	6.6e-12	PPR repeat family
PPR	PF01535	606 - 634	1.3e-06	PPR repeat
E_motif	PF20431	720 - 782	9.9e-12	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011545)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g28380
prunus_persica	Prupe.3G260400_v2.0.a1
pyrus_communis	pycom08g18490 pycom08g18550 pycom111g04950 pycom111g05050 pycom111g05090
rosa_chinensis	RchiOBHm_Chr1g0327501
rosa_laevigata	RLG00000029988
rosa_multiflora	Rmu_co8098046.1_g000001 Rmu_sc0024030.1_g000004 Rmu_ssc0000042.1_g000042
rosa_roxburghii	Rroxscaffold_4G00322610
rosa_rugosa	Rorug01G0067500
rosa_samantha	Rh1AG084800 Rh1BG067200 Rh1CG082800 Rh1DG089300
rosa_wichuraiana	Rw0G015980 Rw1G006640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	555
Acc36I	ACCTGC	1 cut(s)	917
AccB1I	GGYRCC	2 cut(s)	853, 2132
AccBSI	CCGCTC	1 cut(s)	1597
AccII	CGCG	1 cut(s)	1619
AccIII	TCCGGA	1 cut(s)	1000
AciI	CCGC	3 cut(s)	352, 964, 1597
AclWI	GGATC	2 cut(s)	22, 1156
AcoI	YGGCCR	1 cut(s)	667
AcsI	RAATTY	2 cut(s)	2218, 2374
AcuI	CTGAAG	3 cut(s)	81, 707, 1619
AfaI	GTAC	7 cut(s)	356, 436, 527, 599, 1142, 1329, 1445
AfiI	CCNNNNNNNGG	3 cut(s)	1171, 1310, 2387
AflIII	ACRYGT	2 cut(s)	834, 1440
AhlI	ACTAGT	1 cut(s)	73
AjnI	CCWGG	3 cut(s)	708, 1169, 2326
AjuI	GAANNNNNNNTTGG	4 cut(s)	368, 400, 1297, 1329
AleI	CACNNNNGTG	3 cut(s)	336, 630, 710
AluBI	AGCT	8 cut(s)	23, 420, 717, 959, 1262, 1565, 1651, 2147
AluI	AGCT	8 cut(s)	23, 420, 717, 959, 1262, 1565, 1651, 2147
Alw21I	GWGCWC	1 cut(s)	1042
Alw26I	GTCTC	5 cut(s)	9, 290, 830, 1497, 2201
AlwI	GGATC	2 cut(s)	22, 1156
AlwNI	CAGNNNCTG	1 cut(s)	2392
Aor13HI	TCCGGA	1 cut(s)	1000
AoxI	GGCC	4 cut(s)	178, 667, 1866, 2389
ApeKI	GCWGC	8 cut(s)	395, 728, 866, 946, 1648, 1775, 1975, 2144
ApoI	RAATTY	2 cut(s)	2218, 2374
ArsI	GACNNNNNNTTYG	2 cut(s)	889, 921
AseI	ATTAAT	1 cut(s)	1583
AspA2I	CCTAGG	1 cut(s)	1309
AspLEI	GCGC	2 cut(s)	556, 1621
AspS9I	GGNCC	4 cut(s)	178, 766, 1867, 2389
AsuHPI	GGTGA	5 cut(s)	644, 697, 724, 1717, 2285
AvaII	GGWCC	1 cut(s)	766
AvrII	CCTAGG	1 cut(s)	1309
BaeGI	GKGCMC	1 cut(s)	856
BanI	GGYRCC	2 cut(s)	853, 2132
BanII	GRGCYC	1 cut(s)	206
BbsI	GAAGAC	1 cut(s)	1975
Bbv12I	GWGCWC	1 cut(s)	1042
BbvI	GCAGC	8 cut(s)	407, 740, 878, 958, 1660, 1762, 1962, 2156
BccI	CCATC	7 cut(s)	249, 1219, 1442, 1525, 2113, 2167, 2398
BciT130I	CCWGG	3 cut(s)	710, 1171, 2328
BciVI	GTATCC	1 cut(s)	1082
BclI	TGATCA	1 cut(s)	1789
BcoDI	GTCTC	5 cut(s)	9, 290, 830, 1497, 2201
BcuI	ACTAGT	1 cut(s)	73
BfaI	CTAG	8 cut(s)	74, 252, 1112, 1254, 1310, 1667, 2129, 2223
BfuAI	ACCTGC	1 cut(s)	917
BfuI	GTATCC	1 cut(s)	1082
BglI	GCCNNNNNGGC	1 cut(s)	1956
BglII	AGATCT	1 cut(s)	41
BisI	GCNGC	8 cut(s)	396, 729, 867, 947, 1649, 1776, 1976, 2145
BlnI	CCTAGG	1 cut(s)	1309
BlsI	GCNGC	8 cut(s)	397, 730, 868, 948, 1650, 1777, 1977, 2146
BmcAI	AGTACT	1 cut(s)	436
Bme1390I	CCNGG	3 cut(s)	710, 1171, 2328
Bme18I	GGWCC	1 cut(s)	766
BmgT120I	GGNCC	4 cut(s)	178, 766, 1867, 2389
BmiI	GGNNCC	3 cut(s)	855, 1315, 2134
BmrFI	CCNGG	3 cut(s)	710, 1171, 2328
BmsI	GCATC	7 cut(s)	256, 457, 541, 700, 972, 1192, 1836
BpiI	GAAGAC	1 cut(s)	1975
BplI	GAGNNNNNCTC	2 cut(s)	1991, 2023
BpmI	CTGGAG	1 cut(s)	2310
Bpu10I	CCTNAGC	1 cut(s)	2382
BpuEI	CTTGAG	1 cut(s)	1066
BsaAI	YACGTR	1 cut(s)	1084
BsaJI	CCNNGG	9 cut(s)	181, 708, 769, 951, 1075, 1170, 1309, 2235, 2327
BsaWI	WCCGGW	1 cut(s)	1000
Bsc4I	CCNNNNNNNGG	3 cut(s)	1171, 1310, 2387
Bse1I	ACTGG	2 cut(s)	331, 2094
Bse3DI	GCAATG	1 cut(s)	1833
BseAI	TCCGGA	1 cut(s)	1000
BseBI	CCWGG	3 cut(s)	710, 1171, 2328
BseDI	CCNNGG	9 cut(s)	181, 708, 769, 951, 1075, 1170, 1309, 2235, 2327
BseGI	GGATG	4 cut(s)	556, 691, 1207, 1851
BseLI	CCNNNNNNNGG	3 cut(s)	1171, 1310, 2387
BseMI	GCAATG	1 cut(s)	1833
BseMII	CTCAG	2 cut(s)	144, 2373
BseNI	ACTGG	2 cut(s)	331, 2094
BseSI	GKGCMC	1 cut(s)	856
BseXI	GCAGC	8 cut(s)	407, 740, 878, 958, 1660, 1762, 1962, 2156
BsgI	GTGCAG	2 cut(s)	414, 1223
Bsh1236I	CGCG	1 cut(s)	1619
BshFI	GGCC	4 cut(s)	180, 669, 1868, 2391
BshNI	GGYRCC	2 cut(s)	853, 2132
BsiHKAI	GWGCWC	1 cut(s)	1042
BsiSI	CCGG	1 cut(s)	1001
BslI	CCNNNNNNNGG	3 cut(s)	1171, 1310, 2387
BsmAI	GTCTC	5 cut(s)	9, 290, 830, 1497, 2201
BsmI	GAATGC	5 cut(s)	470, 493, 678, 1374, 1828
BsnI	GGCC	4 cut(s)	180, 669, 1868, 2391
Bsp1286I	GDGCHC	3 cut(s)	206, 856, 1042
Bsp13I	TCCGGA	1 cut(s)	1000
Bsp1407I	TGTACA	1 cut(s)	597
Bsp143I	GATC	6 cut(s)	14, 41, 1108, 1161, 1509, 1789
Bsp19I	CCATGG	3 cut(s)	769, 1075, 2235
BspACI	CCGC	3 cut(s)	352, 964, 1597
BspANI	GGCC	4 cut(s)	180, 669, 1868, 2391
BspCNI	CTCAG	2 cut(s)	143, 2374
BspEI	TCCGGA	1 cut(s)	1000
BspFNI	CGCG	1 cut(s)	1619
BspLI	GGNNCC	3 cut(s)	855, 1315, 2134
BspMI	ACCTGC	1 cut(s)	917
BspPI	GGATC	2 cut(s)	22, 1156
BspT107I	GGYRCC	2 cut(s)	853, 2132
BsrBI	CCGCTC	1 cut(s)	1597
BsrDI	GCAATG	1 cut(s)	1833
BsrGI	TGTACA	1 cut(s)	597
BsrI	ACTGG	2 cut(s)	331, 2094
BssECI	CCNNGG	9 cut(s)	181, 708, 769, 951, 1075, 1170, 1309, 2235, 2327
BssMI	GATC	6 cut(s)	14, 41, 1108, 1161, 1509, 1789
BssT1I	CCWWGG	5 cut(s)	769, 951, 1075, 1309, 2235
Bst2UI	CCWGG	3 cut(s)	710, 1171, 2328
Bst4CI	ACNGT	5 cut(s)	530, 738, 1615, 1685, 1806
Bst6I	CTCTTC	1 cut(s)	781
BstAPI	GCANNNNNTGC	1 cut(s)	688
BstAUI	TGTACA	1 cut(s)	597
BstBAI	YACGTR	1 cut(s)	1084
BstC8I	GCNNGC	4 cut(s)	667, 871, 1554, 2142
BstDEI	CTNAG	4 cut(s)	130, 146, 1752, 2382
BstDSI	CCRYGG	3 cut(s)	769, 1075, 2235
BstEII	GGTNACC	2 cut(s)	703, 1918
BstF5I	GGATG	4 cut(s)	556, 691, 1207, 1851
BstFNI	CGCG	1 cut(s)	1619
BstHHI	GCGC	2 cut(s)	556, 1621
BstKTI	GATC	6 cut(s)	17, 44, 1111, 1164, 1512, 1792
BstMAI	GTCTC	5 cut(s)	9, 290, 830, 1497, 2201
BstMBI	GATC	6 cut(s)	14, 41, 1108, 1161, 1509, 1789
BstMWI	GCNNNNNNNGC	7 cut(s)	650, 688, 879, 1259, 1562, 1594, 1956
BstNI	CCWGG	3 cut(s)	710, 1171, 2328
BstNSI	RCATGY	3 cut(s)	838, 1444, 1556
BstPI	GGTNACC	2 cut(s)	703, 1918
BstSCI	CCNGG	3 cut(s)	708, 1169, 2326
BstSLI	GKGCMC	1 cut(s)	856
BstUI	CGCG	1 cut(s)	1619
BstV1I	GCAGC	8 cut(s)	407, 740, 878, 958, 1660, 1762, 1962, 2156
BstV2I	GAAGAC	1 cut(s)	1975
BstX2I	RGATCY	1 cut(s)	41
BstXI	CCANNNNNNTGG	1 cut(s)	1129
BstYI	RGATCY	1 cut(s)	41
BsuI	GTATCC	1 cut(s)	1082
BsuRI	GGCC	4 cut(s)	180, 669, 1868, 2391
BtgI	CCRYGG	3 cut(s)	769, 1075, 2235
BtsCI	GGATG	4 cut(s)	556, 691, 1207, 1851
BtsI	GCAGTG	1 cut(s)	377
BtsIMutI	CAGTG	1 cut(s)	377
BveI	ACCTGC	1 cut(s)	917
Cac8I	GCNNGC	4 cut(s)	667, 871, 1554, 2142
CaiI	CAGNNNCTG	1 cut(s)	2392
CfoI	GCGC	2 cut(s)	556, 1621
Cfr13I	GGNCC	4 cut(s)	178, 766, 1867, 2389
CseI	GACGC	3 cut(s)	143, 752, 1046
Csp6I	GTAC	7 cut(s)	355, 435, 526, 598, 1141, 1328, 1444
CviQI	GTAC	7 cut(s)	355, 435, 526, 598, 1141, 1328, 1444
DdeI	CTNAG	4 cut(s)	130, 146, 1752, 2382
DpnI	GATC	6 cut(s)	16, 43, 1110, 1163, 1511, 1791
DpnII	GATC	6 cut(s)	14, 41, 1108, 1161, 1509, 1789
DraI	TTTAAA	1 cut(s)	2316
EaeI	YGGCCR	1 cut(s)	667
Eam1104I	CTCTTC	1 cut(s)	781
EarI	CTCTTC	1 cut(s)	781
EciI	GGCGGA	1 cut(s)	953
Eco130I	CCWWGG	5 cut(s)	769, 951, 1075, 1309, 2235
Eco24I	GRGCYC	1 cut(s)	206
Eco32I	GATATC	2 cut(s)	1270, 1719
Eco47I	GGWCC	1 cut(s)	766
Eco57I	CTGAAG	3 cut(s)	81, 707, 1619
Eco91I	GGTNACC	2 cut(s)	703, 1918
EcoO109I	RGGNCCY	2 cut(s)	1867, 2389
EcoO65I	GGTNACC	2 cut(s)	703, 1918
EcoRI	GAATTC	1 cut(s)	2218
EcoRII	CCWGG	3 cut(s)	708, 1169, 2326
EcoRV	GATATC	2 cut(s)	1270, 1719
EcoT14I	CCWWGG	5 cut(s)	769, 951, 1075, 1309, 2235
EcoT22I	ATGCAT	2 cut(s)	472, 1851
EcoT38I	GRGCYC	1 cut(s)	206
ErhI	CCWWGG	5 cut(s)	769, 951, 1075, 1309, 2235
FauI	CCCGC	1 cut(s)	1590
FauNDI	CATATG	2 cut(s)	1461, 1840
FbaI	TGATCA	1 cut(s)	1789
Fnu4HI	GCNGC	8 cut(s)	396, 729, 867, 947, 1649, 1776, 1976, 2145
FokI	GGATG	4 cut(s)	563, 678, 1214, 1858
FriOI	GRGCYC	1 cut(s)	206
Fsp4HI	GCNGC	8 cut(s)	396, 729, 867, 947, 1649, 1776, 1976, 2145
FspAI	RTGCGCAY	1 cut(s)	555
FspBI	CTAG	8 cut(s)	74, 252, 1112, 1254, 1310, 1667, 2129, 2223
FspI	TGCGCA	1 cut(s)	555
GlaI	GCGC	2 cut(s)	555, 1620
GluI	GCNGC	8 cut(s)	396, 729, 867, 947, 1649, 1776, 1976, 2145
GsuI	CTGGAG	1 cut(s)	2310
HaeIII	GGCC	4 cut(s)	180, 669, 1868, 2391
HapII	CCGG	1 cut(s)	1001
HgaI	GACGC	3 cut(s)	143, 752, 1046
HhaI	GCGC	2 cut(s)	556, 1621
Hin6I	GCGC	2 cut(s)	554, 1619
HinP1I	GCGC	2 cut(s)	554, 1619
HincII	GTYRAC	1 cut(s)	1626
HindII	GTYRAC	1 cut(s)	1626
HindIII	AAGCTT	1 cut(s)	957
HinfI	GANTC	5 cut(s)	30, 248, 456, 1663, 1980
HpaI	GTTAAC	1 cut(s)	1626
HpaII	CCGG	1 cut(s)	1001
HphI	GGTGA	5 cut(s)	644, 697, 724, 1717, 2285
Hpy166II	GTNNAC	6 cut(s)	598, 600, 1328, 1626, 1681, 2024
Hpy188III	TCNNGA	5 cut(s)	252, 658, 1001, 1277, 1486
Hpy8I	GTNNAC	6 cut(s)	598, 600, 1328, 1626, 1681, 2024
Hpy99I	CGWCG	1 cut(s)	514
HpyAV	CCTTC	6 cut(s)	90, 105, 749, 1666, 2184, 2252
HpyCH4III	ACNGT	5 cut(s)	530, 738, 1615, 1685, 1806
HpyCH4IV	ACGT	2 cut(s)	404, 1083
HpyF10VI	GCNNNNNNNGC	7 cut(s)	650, 688, 879, 1259, 1562, 1594, 1956
HpyF3I	CTNAG	4 cut(s)	130, 146, 1752, 2382
HpySE526I	ACGT	2 cut(s)	404, 1083
HspAI	GCGC	2 cut(s)	554, 1619
Kpn2I	TCCGGA	1 cut(s)	1000
Ksp22I	TGATCA	1 cut(s)	1789
KspAI	GTTAAC	1 cut(s)	1626
Kzo9I	GATC	6 cut(s)	14, 41, 1108, 1161, 1509, 1789
LmnI	GCTCC	2 cut(s)	943, 1594
Lsp1109I	GCAGC	8 cut(s)	407, 740, 878, 958, 1660, 1762, 1962, 2156
LweI	GCATC	7 cut(s)	256, 457, 541, 700, 972, 1192, 1836
MaeI	CTAG	8 cut(s)	74, 252, 1112, 1254, 1310, 1667, 2129, 2223
MaeII	ACGT	2 cut(s)	404, 1083
MaeIII	GTNAC	6 cut(s)	329, 703, 1079, 1685, 1918, 2154
MalI	GATC	6 cut(s)	16, 43, 1110, 1163, 1511, 1791
MbiI	CCGCTC	1 cut(s)	1597
MboI	GATC	6 cut(s)	14, 41, 1108, 1161, 1509, 1789
MboII	GAAGA	8 cut(s)	78, 798, 901, 1474, 1501, 1616, 1975, 2087
MfeI	CAATTG	3 cut(s)	124, 270, 900
MflI	RGATCY	1 cut(s)	41
MhlI	GDGCHC	3 cut(s)	206, 856, 1042
MlyI	GAGTC	1 cut(s)	1989
MmeI	TCCRAC	3 cut(s)	213, 366, 1267
Mph1103I	ATGCAT	2 cut(s)	472, 1851
MroI	TCCGGA	1 cut(s)	1000
MseI	TTAA	9 cut(s)	936, 1299, 1583, 1625, 1701, 1766, 1800, 2094, 2315
MslI	CAYNNNNRTG	9 cut(s)	336, 465, 630, 710, 833, 1383, 1439, 1551, 1557
MspI	CCGG	1 cut(s)	1001
MspR9I	CCNGG	3 cut(s)	710, 1171, 2328
MunI	CAATTG	3 cut(s)	124, 270, 900
Mva1269I	GAATGC	5 cut(s)	470, 493, 678, 1374, 1828
MvaI	CCWGG	3 cut(s)	710, 1171, 2328
MvnI	CGCG	1 cut(s)	1619
MwoI	GCNNNNNNNGC	7 cut(s)	650, 688, 879, 1259, 1562, 1594, 1956
NcoI	CCATGG	3 cut(s)	769, 1075, 2235
NdeI	CATATG	2 cut(s)	1461, 1840
NdeII	GATC	6 cut(s)	14, 41, 1108, 1161, 1509, 1789
NlaIV	GGNNCC	3 cut(s)	855, 1315, 2134
NmeAIII	GCCGAG	1 cut(s)	162
NmuCI	GTSAC	4 cut(s)	329, 703, 1079, 1685
NsbI	TGCGCA	1 cut(s)	555
NsiI	ATGCAT	2 cut(s)	472, 1851
NspI	RCATGY	3 cut(s)	838, 1444, 1556
OliI	CACNNNNGTG	3 cut(s)	336, 630, 710
PaeI	GCATGC	1 cut(s)	1556
PciI	ACATGT	2 cut(s)	834, 1440
PctI	GAATGC	5 cut(s)	470, 493, 678, 1374, 1828
PfeI	GAWTC	4 cut(s)	30, 248, 456, 1663
PkrI	GCNGC	8 cut(s)	397, 730, 868, 948, 1650, 1777, 1977, 2146
PleI	GAGTC	1 cut(s)	1988
PpsI	GAGTC	1 cut(s)	1988
Ppu21I	YACGTR	1 cut(s)	1084
PscI	ACATGT	2 cut(s)	834, 1440
PshBI	ATTAAT	1 cut(s)	1583
Psp6I	CCWGG	3 cut(s)	708, 1169, 2326
PspEI	GGTNACC	2 cut(s)	703, 1918
PspGI	CCWGG	3 cut(s)	708, 1169, 2326
PspN4I	GGNNCC	3 cut(s)	855, 1315, 2134
PspPI	GGNCC	4 cut(s)	178, 766, 1867, 2389
PsrI	GAACNNNNNNTAC	2 cut(s)	981, 1013
PstNI	CAGNNNCTG	1 cut(s)	2392
PsuI	RGATCY	1 cut(s)	41
RsaI	GTAC	7 cut(s)	356, 436, 527, 599, 1142, 1329, 1445
RsaNI	GTAC	7 cut(s)	355, 435, 526, 598, 1141, 1328, 1444
RseI	CAYNNNNRTG	9 cut(s)	336, 465, 630, 710, 833, 1383, 1439, 1551, 1557
SaqAI	TTAA	9 cut(s)	936, 1299, 1583, 1625, 1701, 1766, 1800, 2094, 2315
SatI	GCNGC	8 cut(s)	396, 729, 867, 947, 1649, 1776, 1976, 2145
Sau3AI	GATC	6 cut(s)	14, 41, 1108, 1161, 1509, 1789
Sau96I	GGNCC	4 cut(s)	178, 766, 1867, 2389
ScaI	AGTACT	1 cut(s)	436
SchI	GAGTC	1 cut(s)	1989
ScrFI	CCNGG	3 cut(s)	710, 1171, 2328
SduI	GDGCHC	3 cut(s)	206, 856, 1042
SfaNI	GCATC	7 cut(s)	256, 457, 541, 700, 972, 1192, 1836
SinI	GGWCC	1 cut(s)	766
SmiMI	CAYNNNNRTG	9 cut(s)	336, 465, 630, 710, 833, 1383, 1439, 1551, 1557
SmlI	CTYRAG	1 cut(s)	1045
SmoI	CTYRAG	1 cut(s)	1045
SpeI	ACTAGT	1 cut(s)	73
SphI	GCATGC	1 cut(s)	1556
SsiI	CCGC	3 cut(s)	352, 964, 1597
SspMI	CTAG	8 cut(s)	74, 252, 1112, 1254, 1310, 1667, 2129, 2223
StyD4I	CCNGG	3 cut(s)	708, 1169, 2326
StyI	CCWWGG	5 cut(s)	769, 951, 1075, 1309, 2235
TaaI	ACNGT	5 cut(s)	530, 738, 1615, 1685, 1806
TaiI	ACGT	2 cut(s)	407, 1086
TaqI	TCGA	4 cut(s)	264, 657, 1090, 1134
TaqII	GACCGA	1 cut(s)	754
TatI	WGTACW	6 cut(s)	434, 525, 597, 1140, 1327, 1443
TfiI	GAWTC	4 cut(s)	30, 248, 456, 1663
Tru1I	TTAA	9 cut(s)	936, 1299, 1583, 1625, 1701, 1766, 1800, 2094, 2315
Tru9I	TTAA	9 cut(s)	936, 1299, 1583, 1625, 1701, 1766, 1800, 2094, 2315
TscAI	CASTG	1 cut(s)	377
TseFI	GTSAC	4 cut(s)	329, 703, 1079, 1685
TseI	GCWGC	8 cut(s)	395, 728, 866, 946, 1648, 1775, 1975, 2144
Tsp45I	GTSAC	4 cut(s)	329, 703, 1079, 1685
TspGWI	ACGGA	1 cut(s)	326
TspRI	CASTG	1 cut(s)	377
VpaK11BI	GGWCC	1 cut(s)	766
VspI	ATTAAT	1 cut(s)	1583
XapI	RAATTY	2 cut(s)	2218, 2374
XbaI	TCTAGA	1 cut(s)	251
XceI	RCATGY	3 cut(s)	838, 1444, 1556
XmaJI	CCTAGG	1 cut(s)	1309
XspI	CTAG	8 cut(s)	74, 252, 1112, 1254, 1310, 1667, 2129, 2223
ZrmI	AGTACT	1 cut(s)	436
Zsp2I	ATGCAT	2 cut(s)	472, 1851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.