FvH4_3g29470

WLM domain

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
22526677 .. 22530162
3486 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g29470.t2

Sequence Viewer

Length: 1269 bp
ATGAACACGGTGGGGGACCTGAACAAGGTTTGGGAAATAAGAGCCCTCAAAAGAAAGGATCGACAAGATGAAGCAACCAAGATGCTCGACAGAATCGCCAAACAGGTCCAACCCATTATGCGCAATCACAAATGGCGCGTCAAGCTTCTCTCCGAGATGTGTCCAACCAATCCTAGGCTTCTTGGGTTGAATGTGAACCGCGGTGTGCATGTGAAGCTGAGGCTGCGTAGGCCGAATAGGGATTTGGATTTCTATCCCTTTGATCAAGTTCTTGATACAATGCTACACGAGCTTTGCCACAATGTTTACGGTCCTCACGATGCCAAATTCTACAAGCTATGGGATGAACTTAGGAAGGAATGTGAGGAGCTGATGGCTAAGGGTGTAACTGGCACTGCGGAGGGGTTTGATCTTCCAGGGAGGCGTTTGGGAAGTGTTACACGTCAACCCCCTCTTTCTTCTCTCCGCAAAACAGCACTTGCTGCTGCAGAAAAGAGAGCTGTTTTGGGATCTTTGATGCCATCTGGACCTAAGCGTCTTGGTGGTGATAGCTCTATGATGGCTGCACTTAGTCCGGTGCAAGCTGCGGCAATGGCTGCCGAGAGAAGATTGCAGGATGATATCTGGTGTGGTTCAGCATTTGCTGGAGCCTCTGAGGATGGTGAATGCAACTCTGTTACATCGGAGGACAATGAAAATATAGATTCAAGTGCAGGAAGTTCAAGGCTTCACAATGGTGCAAAAGCACAATCCTCAGATACATTACCACAAAAAAGGAGTCGCATACCTAATAACTCTTCTTTTCAATCATCCAAAGTCCATTTAGGTTCCGAGTTTGTAGATCTATCCTATGACGACTCAATGTCTGGGTCGATGATGAACTCTGACACGAGATCTCAGAAAAAAAGTCGTGAATCAGAAACCAGTTCATTCCCTCTATCCAATCATCATCCAGAATCTAGTTTTGTGGATTTGTTGGGTATTTCAACCTCTGGGTCTGGATCTAACAACGATGGAACACATAATCCTGAAGAATCTGCTACGTGGCAGTGTGGAACATGCACTTTGTTAAATCAGCCATTAGCTCCAGTATGCGAGCTGTGTAGCGCCCACAGACCAAAAGATGTTGGTACAAAATACAAAATCTGGTCATGTAAATTCTGCACTTTGGAAAACAGTGTGAAGTTGGAGATTTGCTCAGCATGTGGACAGTGGAGATACTCGCATGGTCCACCAATAGCAACCCAACCACCAAATCTGGGGACTTGA

Protein Analysis

423

Amino Acids

46.55

Weight (kDa)

8.36

Isoelectric Point (pI)

57.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 534
Acc16I TGCGCA 1 cut(s) 122
AccII CGCG 2 cut(s) 138, 201
AciI CCGC 5 cut(s) 199, 201, 398, 466, 587
AclWI GGATC 3 cut(s) 66, 517, 1009
AcsI RAATTY 2 cut(s) 326, 1157
AcuI CTGAAG 1 cut(s) 1050
AfaI GTAC 1 cut(s) 1132
AfiI CCNNNNNNNGG 3 cut(s) 25, 174, 1259
AflIII ACRYGT 1 cut(s) 440
AgsI TTSAA 5 cut(s) 190, 708, 723, 806, 987
AhdI GACNNNNNGTC 1 cut(s) 862
AjiI CACGTC 1 cut(s) 443
AjnI CCWGG 1 cut(s) 415
AjuI GAANNNNNNNTTGG 2 cut(s) 227, 259
AleI CACNNNNGTG 1 cut(s) 735
AloI GAACNNNNNNTCC 2 cut(s) 1009, 1041
AlwI GGATC 3 cut(s) 66, 517, 1009
AoxI GGCC 1 cut(s) 230
ApeKI GCWGC 6 cut(s) 223, 482, 485, 563, 584, 596
ApoI RAATTY 2 cut(s) 326, 1157
ArsI GACNNNNNNTTYG 4 cut(s) 123, 155, 763, 795
AspA2I CCTAGG 1 cut(s) 173
AspLEI GCGC 3 cut(s) 123, 138, 1109
AspS9I GGNCC 5 cut(s) 16, 106, 311, 527, 1229
AsuHPI GGTGA 2 cut(s) 557, 674
AvaII GGWCC 5 cut(s) 16, 106, 311, 527, 1229
AvrII CCTAGG 1 cut(s) 173
BanII GRGCYC 1 cut(s) 46
BauI CACGAG 2 cut(s) 287, 889
BbvCI CCTCAGC 1 cut(s) 218
BbvI GCAGC 6 cut(s) 210, 469, 472, 550, 571, 583
BccI CCATC 5 cut(s) 367, 529, 553, 653, 1007
BciT130I CCWGG 1 cut(s) 417
BclI TGATCA 1 cut(s) 262
BfaI CTAG 2 cut(s) 174, 960
BfmI CTRYAG 1 cut(s) 486
BfoI RGCGCY 1 cut(s) 1110
BglII AGATCT 2 cut(s) 841, 893
BisI GCNGC 7 cut(s) 224, 483, 486, 564, 585, 588, 597
BlnI CCTAGG 1 cut(s) 173
BlpI GCTNAGC 1 cut(s) 1198
BlsI GCNGC 7 cut(s) 225, 484, 487, 565, 586, 589, 598
Bme1390I CCNGG 1 cut(s) 417
Bme18I GGWCC 5 cut(s) 16, 106, 311, 527, 1229
BmeRI GACNNNNNGTC 1 cut(s) 862
BmgBI CACGTC 1 cut(s) 443
BmgT120I GGNCC 5 cut(s) 16, 106, 311, 527, 1229
BmiI GGNNCC 3 cut(s) 17, 649, 829
BmrFI CCNGG 1 cut(s) 417
BmsI GCATC 3 cut(s) 72, 310, 507
BplI GAGNNNNNCTC 2 cut(s) 1181, 1213
BpmI CTGGAG 2 cut(s) 666, 1071
Bpu10I CCTNAGC 3 cut(s) 218, 378, 531
Bpu1102I GCTNAGC 1 cut(s) 1198
BsaAI YACGTR 1 cut(s) 1044
BsaBI GATNNNNATC 1 cut(s) 252
BsaJI CCNNGG 3 cut(s) 173, 199, 416
BsaWI WCCGGW 1 cut(s) 574
Bsc4I CCNNNNNNNGG 3 cut(s) 25, 174, 1259
Bse1I ACTGG 3 cut(s) 394, 924, 1088
Bse3DI GCAATG 1 cut(s) 597
Bse8I GATNNNNATC 1 cut(s) 252
BseBI CCWGG 1 cut(s) 417
BseDI CCNNGG 3 cut(s) 173, 199, 416
BseGI GGATG 5 cut(s) 349, 622, 664, 809, 949
BseJI GATNNNNATC 1 cut(s) 252
BseLI CCNNNNNNNGG 3 cut(s) 25, 174, 1259
BseMI GCAATG 1 cut(s) 597
BseMII CTCAG 5 cut(s) 209, 645, 768, 911, 1212
BseNI ACTGG 3 cut(s) 394, 924, 1088
BseRI GAGGAG 1 cut(s) 380
BseXI GCAGC 6 cut(s) 210, 469, 472, 550, 571, 583
BsgI GTGCAG 3 cut(s) 549, 732, 1147
Bsh1236I CGCG 2 cut(s) 138, 201
BshFI GGCC 1 cut(s) 232
BsiSI CCGG 1 cut(s) 575
BslFI GGGAC 1 cut(s) 29
BslI CCNNNNNNNGG 3 cut(s) 25, 174, 1259
BsmFI GGGAC 1 cut(s) 29
BsmI GAATGC 1 cut(s) 671
BsnI GGCC 1 cut(s) 232
Bsp1286I GDGCHC 1 cut(s) 46
Bsp143I GATC 7 cut(s) 58, 262, 409, 509, 841, 893, 1001
Bsp1720I GCTNAGC 1 cut(s) 1198
BspACI CCGC 5 cut(s) 199, 201, 398, 466, 587
BspANI GGCC 1 cut(s) 232
BspCNI CTCAG 5 cut(s) 210, 646, 767, 910, 1211
BspFNI CGCG 2 cut(s) 138, 201
BspLI GGNNCC 3 cut(s) 17, 649, 829
BspMAI CTGCAG 1 cut(s) 490
BspPI GGATC 3 cut(s) 66, 517, 1009
BsrDI GCAATG 1 cut(s) 597
BsrI ACTGG 3 cut(s) 394, 924, 1088
BssECI CCNNGG 3 cut(s) 173, 199, 416
BssMI GATC 7 cut(s) 58, 262, 409, 509, 841, 893, 1001
BssSI CACGAG 2 cut(s) 287, 889
BssT1I CCWWGG 1 cut(s) 173
Bst2BI CACGAG 2 cut(s) 287, 889
Bst2UI CCWGG 1 cut(s) 417
Bst4CI ACNGT 4 cut(s) 10, 311, 1178, 1212
Bst6I CTCTTC 1 cut(s) 802
BstAPI GCANNNNNTGC 2 cut(s) 482, 596
BstBAI YACGTR 1 cut(s) 1044
BstC8I GCNNGC 2 cut(s) 582, 1097
BstDEI CTNAG 9 cut(s) 218, 350, 378, 531, 569, 654, 754, 897, 1198
BstDSI CCRYGG 1 cut(s) 199
BstENI CCTNNNNNAGG 1 cut(s) 23
BstF5I GGATG 5 cut(s) 349, 622, 664, 809, 949
BstFNI CGCG 2 cut(s) 138, 201
BstH2I RGCGCY 1 cut(s) 1110
BstHHI GCGC 3 cut(s) 123, 138, 1109
BstKTI GATC 7 cut(s) 61, 265, 412, 512, 844, 896, 1004
BstMBI GATC 7 cut(s) 58, 262, 409, 509, 841, 893, 1001
BstMWI GCNNNNNNNGC 8 cut(s) 142, 214, 223, 229, 289, 482, 593, 596
BstNI CCWGG 1 cut(s) 417
BstNSI RCATGY 3 cut(s) 212, 1062, 1206
BstSCI CCNGG 1 cut(s) 415
BstSFI CTRYAG 1 cut(s) 486
BstUI CGCG 2 cut(s) 138, 201
BstV1I GCAGC 6 cut(s) 210, 469, 472, 550, 571, 583
BstX2I RGATCY 4 cut(s) 509, 841, 893, 1001
BstYI RGATCY 4 cut(s) 509, 841, 893, 1001
BsuRI GGCC 1 cut(s) 232
BtgI CCRYGG 1 cut(s) 199
BtrI CACGTC 1 cut(s) 443
BtsCI GGATG 5 cut(s) 349, 622, 664, 809, 949
BtsI GCAGTG 2 cut(s) 393, 1055
BtsIMutI CAGTG 4 cut(s) 393, 1055, 1183, 1217
Cac8I GCNNGC 2 cut(s) 582, 1097
CfoI GCGC 3 cut(s) 123, 138, 1109
Cfr13I GGNCC 5 cut(s) 16, 106, 311, 527, 1229
Cfr42I CCGCGG 1 cut(s) 202
CseI GACGC 2 cut(s) 127, 524
Csp6I GTAC 1 cut(s) 1131
CviAII CATG 5 cut(s) 209, 1059, 1152, 1203, 1226
CviQI GTAC 1 cut(s) 1131
DdeI CTNAG 9 cut(s) 218, 350, 378, 531, 569, 654, 754, 897, 1198
DpnI GATC 7 cut(s) 60, 264, 411, 511, 843, 895, 1003
DpnII GATC 7 cut(s) 58, 262, 409, 509, 841, 893, 1001
DrdI GACNNNNNNGTC 1 cut(s) 534
DriI GACNNNNNGTC 1 cut(s) 862
DseDI GACNNNNNNGTC 1 cut(s) 534
Eam1104I CTCTTC 1 cut(s) 802
Eam1105I GACNNNNNGTC 1 cut(s) 862
EarI CTCTTC 1 cut(s) 802
Eco130I CCWWGG 1 cut(s) 173
Eco24I GRGCYC 1 cut(s) 46
Eco32I GATATC 1 cut(s) 622
Eco47I GGWCC 5 cut(s) 16, 106, 311, 527, 1229
Eco57I CTGAAG 1 cut(s) 1050
EcoNI CCTNNNNNAGG 1 cut(s) 23
EcoO109I RGGNCCY 1 cut(s) 16
EcoRII CCWGG 1 cut(s) 415
EcoRV GATATC 1 cut(s) 622
EcoT14I CCWWGG 1 cut(s) 173
EcoT38I GRGCYC 1 cut(s) 46
ErhI CCWWGG 1 cut(s) 173
FaeI CATG 5 cut(s) 212, 1062, 1155, 1206, 1229
FaqI GGGAC 1 cut(s) 29
FatI CATG 5 cut(s) 208, 1058, 1151, 1202, 1225
FbaI TGATCA 1 cut(s) 262
Fnu4HI GCNGC 7 cut(s) 224, 483, 486, 564, 585, 588, 597
FokI GGATG 5 cut(s) 356, 629, 671, 796, 936
FriOI GRGCYC 1 cut(s) 46
Fsp4HI GCNGC 7 cut(s) 224, 483, 486, 564, 585, 588, 597
FspBI CTAG 2 cut(s) 174, 960
FspI TGCGCA 1 cut(s) 122
GlaI GCGC 3 cut(s) 122, 137, 1108
GluI GCNGC 7 cut(s) 224, 483, 486, 564, 585, 588, 597
GsuI CTGGAG 2 cut(s) 666, 1071
HaeII RGCGCY 1 cut(s) 1110
HaeIII GGCC 1 cut(s) 232
HapII CCGG 1 cut(s) 575
HgaI GACGC 2 cut(s) 127, 524
HhaI GCGC 3 cut(s) 123, 138, 1109
Hin1II CATG 5 cut(s) 212, 1062, 1155, 1206, 1229
Hin6I GCGC 3 cut(s) 121, 136, 1107
HinP1I GCGC 3 cut(s) 121, 136, 1107
HincII GTYRAC 1 cut(s) 446
HindII GTYRAC 1 cut(s) 446
HindIII AAGCTT 1 cut(s) 143
HinfI GANTC 7 cut(s) 93, 704, 778, 857, 914, 956, 1034
HpaII CCGG 1 cut(s) 575
HphI GGTGA 2 cut(s) 557, 674
Hpy166II GTNNAC 5 cut(s) 196, 307, 446, 1208, 1232
Hpy188I TCNGA 8 cut(s) 154, 655, 685, 757, 832, 886, 900, 919
Hpy188III TCNNGA 7 cut(s) 272, 317, 525, 911, 953, 999, 1028
Hpy8I GTNNAC 5 cut(s) 196, 307, 446, 1208, 1232
HpyAV CCTTC 1 cut(s) 349
HpyCH4III ACNGT 4 cut(s) 10, 311, 1178, 1212
HpyCH4IV ACGT 2 cut(s) 442, 1043
HpyF10VI GCNNNNNNNGC 8 cut(s) 142, 214, 223, 229, 289, 482, 593, 596
HpyF3I CTNAG 9 cut(s) 218, 350, 378, 531, 569, 654, 754, 897, 1198
HpySE526I ACGT 2 cut(s) 442, 1043
Hsp92II CATG 5 cut(s) 212, 1062, 1155, 1206, 1229
HspAI GCGC 3 cut(s) 121, 136, 1107
Ksp22I TGATCA 1 cut(s) 262
KspI CCGCGG 1 cut(s) 202
Kzo9I GATC 7 cut(s) 58, 262, 409, 509, 841, 893, 1001
LmnI GCTCC 3 cut(s) 367, 647, 1090
Lsp1109I GCAGC 6 cut(s) 210, 469, 472, 550, 571, 583
LweI GCATC 3 cut(s) 72, 310, 507
MaeI CTAG 2 cut(s) 174, 960
MaeII ACGT 2 cut(s) 442, 1043
MaeIII GTNAC 3 cut(s) 385, 436, 676
MalI GATC 7 cut(s) 60, 264, 411, 511, 843, 895, 1003
MboI GATC 7 cut(s) 58, 262, 409, 509, 841, 893, 1001
MboII GAAGA 5 cut(s) 404, 450, 618, 789, 1043
MflI RGATCY 4 cut(s) 509, 841, 893, 1001
MhlI GDGCHC 1 cut(s) 46
MluCI AATT 2 cut(s) 326, 1157
MlyI GAGTC 2 cut(s) 787, 851
MmeI TCCRAC 3 cut(s) 133, 188, 1167
MseI TTAA 1 cut(s) 1070
MslI CAYNNNNRTG 1 cut(s) 735
MspA1I CMGCKG 1 cut(s) 201
MspI CCGG 1 cut(s) 575
MspR9I CCNGG 1 cut(s) 417
Mva1269I GAATGC 1 cut(s) 671
MvaI CCWGG 1 cut(s) 417
MvnI CGCG 2 cut(s) 138, 201
MwoI GCNNNNNNNGC 8 cut(s) 142, 214, 223, 229, 289, 482, 593, 596
NdeII GATC 7 cut(s) 58, 262, 409, 509, 841, 893, 1001
NlaIII CATG 5 cut(s) 212, 1062, 1155, 1206, 1229
NlaIV GGNNCC 3 cut(s) 17, 649, 829
NmeAIII GCCGAG 1 cut(s) 625
NsbI TGCGCA 1 cut(s) 122
NspI RCATGY 3 cut(s) 212, 1062, 1206
OliI CACNNNNGTG 1 cut(s) 735
PcsI WCGNNNNNNNCGW 1 cut(s) 315
PctI GAATGC 1 cut(s) 671
PfeI GAWTC 5 cut(s) 93, 704, 914, 956, 1034
PkrI GCNGC 7 cut(s) 225, 484, 487, 565, 586, 589, 598
PleI GAGTC 2 cut(s) 786, 851
PpsI GAGTC 2 cut(s) 786, 851
Ppu21I YACGTR 1 cut(s) 1044
PpuMI RGGWCCY 1 cut(s) 16
Psp5II RGGWCCY 1 cut(s) 16
Psp6I CCWGG 1 cut(s) 415
PspGI CCWGG 1 cut(s) 415
PspN4I GGNNCC 3 cut(s) 17, 649, 829
PspPI GGNCC 5 cut(s) 16, 106, 311, 527, 1229
PspPPI RGGWCCY 1 cut(s) 16
PstI CTGCAG 1 cut(s) 490
PsuI RGATCY 4 cut(s) 509, 841, 893, 1001
RsaI GTAC 1 cut(s) 1132
RsaNI GTAC 1 cut(s) 1131
RseI CAYNNNNRTG 1 cut(s) 735
SacII CCGCGG 1 cut(s) 202
SaqAI TTAA 1 cut(s) 1070
SatI GCNGC 7 cut(s) 224, 483, 486, 564, 585, 588, 597
Sau3AI GATC 7 cut(s) 58, 262, 409, 509, 841, 893, 1001
Sau96I GGNCC 5 cut(s) 16, 106, 311, 527, 1229
SchI GAGTC 2 cut(s) 787, 851
ScrFI CCNGG 1 cut(s) 417
SduI GDGCHC 1 cut(s) 46
SfaNI GCATC 3 cut(s) 72, 310, 507
SfcI CTRYAG 1 cut(s) 486
Sfr303I CCGCGG 1 cut(s) 202
SgrBI CCGCGG 1 cut(s) 202
SinI GGWCC 5 cut(s) 16, 106, 311, 527, 1229
SmiMI CAYNNNNRTG 1 cut(s) 735
Sse9I AATT 2 cut(s) 326, 1157
SsiI CCGC 5 cut(s) 199, 201, 398, 466, 587
SspMI CTAG 2 cut(s) 174, 960
StyD4I CCNGG 1 cut(s) 415
StyI CCWWGG 1 cut(s) 173
TaaI ACNGT 4 cut(s) 10, 311, 1178, 1212
TaiI ACGT 2 cut(s) 445, 1046
TaqI TCGA 3 cut(s) 61, 87, 872
TasI AATT 2 cut(s) 326, 1157
TauI GCSGC 1 cut(s) 590
TfiI GAWTC 5 cut(s) 93, 704, 914, 956, 1034
Tru1I TTAA 1 cut(s) 1070
Tru9I TTAA 1 cut(s) 1070
TscAI CASTG 4 cut(s) 400, 1055, 1183, 1217
TseI GCWGC 6 cut(s) 223, 482, 485, 563, 584, 596
TspDTI ATGAA 6 cut(s) 17, 84, 360, 708, 893, 918
TspRI CASTG 4 cut(s) 400, 1055, 1183, 1217
VpaK11BI GGWCC 5 cut(s) 16, 106, 311, 527, 1229
XagI CCTNNNNNAGG 1 cut(s) 23
XapI RAATTY 2 cut(s) 326, 1157
XceI RCATGY 3 cut(s) 212, 1062, 1206
XmaJI CCTAGG 1 cut(s) 173
XspI CTAG 2 cut(s) 174, 960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.