Prupe.4G239900_v2.0.a1

WLM domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
15762655 .. 15765313
2659 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G239900.2

Sequence Viewer

Length: 1269 bp
ATGAATTTGGGGGACCTAAACAAGGTCTGGGAAATCAAAACCCTGAAAAGAAAGGATCAGGAAGCGGAAGCCAGGAAGATTCTCGACAAAATTGCCAAACAGGTCCAGCCCATTATGCGCAAACACAAATGGCGCGTCAAGCTTCTCTCTGAATTCTGCCCAAACAACCATCGTCTTCTAGGGTTGAATGTGAACCGTGGCGTGCATGTGAAACTGAGGCTGCGTAAGCCAAACAGGGATTGGGATTTCTATCCCATTGATCAAGTCCTTGATACAATGCTTCACGAACTTTGTCACAATGTTCATGGCCCTCATGATGCCAAGTTCTACAAGCTCTGGGATGAACTTAGAAAGGAATGTGAGGAGCTGATGTCTAAGGGAATAACTGGCAGTGCTGAGGGGTTTGATCTTCCAGGAAGACGTTTGGGGAGTTTTTCACGTCAACCCCCTCTTTCTTCTCTCCGCAAAACTGCACTTGCTGCTGCAGAAAAGAGAGTTCTTTTAGGATCTATAATGCCATCTGGACCTAAGCGTCTTGGTGGTGATAGCAATATTATGGTTGCACTTAGTCCAGTGCAAGCTGCTGCGATGGCTGCAGAGAGGAGATTGCAGGATGATATCTGGTGTGGTTCGGTGTCAGCTGAAGCTTCCACAGATGGAGAATGTCGCTATGATAAATCAGAGGACCATCAAAATATAGGGCCAAATGCAGGAAGTTCAAGGCCTCCCAATGGTGCAAAAGCACATTCCTCAGATACGTTATTGCAAAAAAGAAGTCGTGAACTGAATACCAATGGTTTTTCTAAATCTACCAAATGCAATTTAGGATCTGAGTTGGTAGATTTATCCATGGATGAGTCAATATCTGGGTCCATGATTGATTGTGATATCAAATCCCAAAAGAGAAGTCGAGGATCAGAAAATAGTTCATTCTCTCGTTCCAATTGCCATCTAGAATCTAGTGTTAGGCATCAGTCAGGTGTTTCATCTTCCGGGTCCATGTCTAATAATGATGGAACACATAATCCAGAGGAAACTGCTCTTTGGCAGTGCAAAACGTGCACTTTGCTGAATCCTCCATTAGCTCCAATATGTGAGCTCTGTAACACAAAGAAACCAAAAGATGTTGGTACAAATTACAAAATTTGGTCCTGTAGATTCTGCACTTTGGAAAACTGTGTGAAGTTGGAGAAATGCTCAGCATGTGGTCAGTGGAGATACTCACATGGCCCACCAATAGCAAGCCAGGCACCAAATCTGGGCACTTGA

Protein Analysis

423

Amino Acids

46.91

Weight (kDa)

9.0

Isoelectric Point (pI)

54.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 531
Acc16I TGCGCA 1 cut(s) 119
AccB1I GGYRCC 1 cut(s) 1249
AccII CGCG 1 cut(s) 135
AciI CCGC 2 cut(s) 65, 463
AclWI GGATC 4 cut(s) 63, 514, 835, 922
AcsI RAATTY 3 cut(s) 4, 152, 1143
AcuI CTGAAG 1 cut(s) 663
AfaI GTAC 1 cut(s) 1132
AfiI CCNNNNNNNGG 4 cut(s) 22, 710, 731, 1259
AgsI TTSAA 2 cut(s) 187, 720
AjiI CACGTC 1 cut(s) 440
AjnI CCWGG 3 cut(s) 71, 412, 1245
AloI GAACNNNNNNTCC 2 cut(s) 1009, 1041
AluBI AGCT 8 cut(s) 142, 334, 367, 581, 641, 647, 1085, 1099
AluI AGCT 8 cut(s) 142, 334, 367, 581, 641, 647, 1085, 1099
Alw21I GWGCWC 2 cut(s) 1064, 1101
Alw44I GTGCAC 1 cut(s) 1060
AlwI GGATC 4 cut(s) 63, 514, 835, 922
AoxI GGCC 4 cut(s) 307, 701, 722, 1228
ApaLI GTGCAC 1 cut(s) 1060
ApeKI GCWGC 6 cut(s) 220, 479, 482, 581, 584, 593
ApoI RAATTY 3 cut(s) 4, 152, 1143
ArsI GACNNNNNNTTYG 6 cut(s) 120, 152, 760, 792, 892, 924
AspLEI GCGC 2 cut(s) 120, 135
AsuC2I CCSGG 1 cut(s) 994
AsuHPI GGTGA 1 cut(s) 554
AvaII GGWCC 7 cut(s) 13, 103, 524, 685, 870, 996, 1149
BaeGI GKGCMC 2 cut(s) 1064, 1265
BanI GGYRCC 1 cut(s) 1249
BanII GRGCYC 1 cut(s) 1101
BbsI GAAGAC 2 cut(s) 167, 424
Bbv12I GWGCWC 2 cut(s) 1064, 1101
BbvCI CCTCAGC 1 cut(s) 396
BbvI GCAGC 6 cut(s) 207, 466, 469, 568, 571, 580
BccI CCATC 7 cut(s) 177, 526, 583, 650, 696, 957, 1007
BcgI CGANNNNNNTGC 2 cut(s) 74, 108
BciT130I CCWGG 3 cut(s) 73, 414, 1247
BclI TGATCA 1 cut(s) 259
BcnI CCSGG 1 cut(s) 994
BfaI CTAG 3 cut(s) 179, 953, 960
BfmI CTRYAG 3 cut(s) 483, 594, 1153
BisI GCNGC 6 cut(s) 221, 480, 483, 582, 585, 594
BlpI GCTNAGC 1 cut(s) 1198
BlsI GCNGC 6 cut(s) 222, 481, 484, 583, 586, 595
Bme1390I CCNGG 4 cut(s) 73, 414, 994, 1247
Bme18I GGWCC 7 cut(s) 13, 103, 524, 685, 870, 996, 1149
BmgBI CACGTC 1 cut(s) 440
BmiI GGNNCC 4 cut(s) 14, 871, 997, 1251
BmrFI CCNGG 4 cut(s) 73, 414, 994, 1247
BmsI GCATC 2 cut(s) 307, 979
BpiI GAAGAC 2 cut(s) 167, 424
BplI GAGNNNNNCTC 2 cut(s) 1181, 1213
Bpu10I CCTNAGC 2 cut(s) 396, 528
Bpu1102I GCTNAGC 1 cut(s) 1198
BpuMI CCSGG 1 cut(s) 994
BsaBI GATNNNNATC 1 cut(s) 249
BsaJI CCNNGG 2 cut(s) 196, 849
BsaXI ACNNNNNCTCC 2 cut(s) 356, 386
Bsc4I CCNNNNNNNGG 4 cut(s) 22, 710, 731, 1259
Bse1I ACTGG 2 cut(s) 391, 572
Bse8I GATNNNNATC 1 cut(s) 249
BseBI CCWGG 3 cut(s) 73, 414, 1247
BseDI CCNNGG 2 cut(s) 196, 849
BseGI GGATG 3 cut(s) 346, 619, 859
BseJI GATNNNNATC 1 cut(s) 249
BseLI CCNNNNNNNGG 4 cut(s) 22, 710, 731, 1259
BseMII CTCAG 5 cut(s) 206, 387, 765, 822, 1212
BseNI ACTGG 2 cut(s) 391, 572
BseRI GAGGAG 2 cut(s) 377, 616
BseSI GKGCMC 2 cut(s) 1064, 1265
BseXI GCAGC 6 cut(s) 207, 466, 469, 568, 571, 580
BsgI GTGCAG 2 cut(s) 456, 1147
Bsh1236I CGCG 1 cut(s) 135
BshFI GGCC 4 cut(s) 309, 703, 724, 1230
BshNI GGYRCC 1 cut(s) 1249
BsiHKAI GWGCWC 2 cut(s) 1064, 1101
BsiSI CCGG 1 cut(s) 993
BslFI GGGAC 1 cut(s) 26
BslI CCNNNNNNNGG 4 cut(s) 22, 710, 731, 1259
BsmFI GGGAC 1 cut(s) 26
BsnI GGCC 4 cut(s) 309, 703, 724, 1230
Bsp1286I GDGCHC 3 cut(s) 1064, 1101, 1265
Bsp143I GATC 6 cut(s) 55, 259, 406, 506, 827, 914
Bsp1720I GCTNAGC 1 cut(s) 1198
Bsp19I CCATGG 1 cut(s) 849
BspACI CCGC 2 cut(s) 65, 463
BspANI GGCC 4 cut(s) 309, 703, 724, 1230
BspCNI CTCAG 5 cut(s) 207, 388, 764, 823, 1211
BspFNI CGCG 1 cut(s) 135
BspHI TCATGA 1 cut(s) 313
BspLI GGNNCC 4 cut(s) 14, 871, 997, 1251
BspMAI CTGCAG 2 cut(s) 487, 598
BspPI GGATC 4 cut(s) 63, 514, 835, 922
BspT107I GGYRCC 1 cut(s) 1249
BsrI ACTGG 2 cut(s) 391, 572
BssECI CCNNGG 2 cut(s) 196, 849
BssMI GATC 6 cut(s) 55, 259, 406, 506, 827, 914
BssT1I CCWWGG 1 cut(s) 849
Bst2UI CCWGG 3 cut(s) 73, 414, 1247
Bst4CI ACNGT 2 cut(s) 197, 1178
BstAPI GCANNNNNTGC 2 cut(s) 479, 1059
BstC8I GCNNGC 3 cut(s) 203, 579, 1243
BstDEI CTNAG 9 cut(s) 215, 347, 375, 396, 528, 566, 751, 831, 1198
BstDSI CCRYGG 2 cut(s) 196, 849
BstENI CCTNNNNNAGG 1 cut(s) 20
BstF5I GGATG 3 cut(s) 346, 619, 859
BstFNI CGCG 1 cut(s) 135
BstHHI GCGC 2 cut(s) 120, 135
BstKTI GATC 6 cut(s) 58, 262, 409, 509, 830, 917
BstMBI GATC 6 cut(s) 55, 259, 406, 506, 827, 914
BstMWI GCNNNNNNNGC 8 cut(s) 115, 139, 226, 479, 590, 593, 1059, 1247
BstNI CCWGG 3 cut(s) 73, 414, 1247
BstNSI RCATGY 2 cut(s) 209, 1206
BstSCI CCNGG 4 cut(s) 71, 412, 992, 1245
BstSFI CTRYAG 3 cut(s) 483, 594, 1153
BstSLI GKGCMC 2 cut(s) 1064, 1265
BstUI CGCG 1 cut(s) 135
BstV1I GCAGC 6 cut(s) 207, 466, 469, 568, 571, 580
BstV2I GAAGAC 2 cut(s) 167, 424
BstX2I RGATCY 2 cut(s) 506, 827
BstYI RGATCY 2 cut(s) 506, 827
BsuRI GGCC 4 cut(s) 309, 703, 724, 1230
BtgI CCRYGG 2 cut(s) 196, 849
BtgZI GCGATG 1 cut(s) 602
BtrI CACGTC 1 cut(s) 440
BtsCI GGATG 3 cut(s) 346, 619, 859
BtsI GCAGTG 2 cut(s) 397, 1055
BtsIMutI CAGTG 4 cut(s) 397, 579, 1055, 1217
Cac8I GCNNGC 3 cut(s) 203, 579, 1243
CciI TCATGA 1 cut(s) 313
CfoI GCGC 2 cut(s) 120, 135
CseI GACGC 2 cut(s) 124, 521
Csp6I GTAC 1 cut(s) 1131
CviAII CATG 8 cut(s) 206, 305, 314, 850, 874, 1000, 1203, 1226
CviQI GTAC 1 cut(s) 1131
DdeI CTNAG 9 cut(s) 215, 347, 375, 396, 528, 566, 751, 831, 1198
DpnI GATC 6 cut(s) 57, 261, 408, 508, 829, 916
DpnII GATC 6 cut(s) 55, 259, 406, 506, 827, 914
DrdI GACNNNNNNGTC 1 cut(s) 531
DseDI GACNNNNNNGTC 1 cut(s) 531
Ecl136II GAGCTC 1 cut(s) 1099
Eco130I CCWWGG 1 cut(s) 849
Eco147I AGGCCT 1 cut(s) 724
Eco24I GRGCYC 1 cut(s) 1101
Eco32I GATATC 2 cut(s) 619, 889
Eco47I GGWCC 7 cut(s) 13, 103, 524, 685, 870, 996, 1149
Eco53kI GAGCTC 1 cut(s) 1099
Eco57I CTGAAG 1 cut(s) 663
EcoICRI GAGCTC 1 cut(s) 1099
EcoNI CCTNNNNNAGG 1 cut(s) 20
EcoO109I RGGNCCY 1 cut(s) 13
EcoRI GAATTC 1 cut(s) 152
EcoRII CCWGG 3 cut(s) 71, 412, 1245
EcoRV GATATC 2 cut(s) 619, 889
EcoT14I CCWWGG 1 cut(s) 849
EcoT38I GRGCYC 1 cut(s) 1101
ErhI CCWWGG 1 cut(s) 849
FaeI CATG 8 cut(s) 209, 308, 317, 853, 877, 1003, 1206, 1229
FaqI GGGAC 1 cut(s) 26
FatI CATG 8 cut(s) 205, 304, 313, 849, 873, 999, 1202, 1225
FbaI TGATCA 1 cut(s) 259
Fnu4HI GCNGC 6 cut(s) 221, 480, 483, 582, 585, 594
FokI GGATG 3 cut(s) 353, 626, 866
FriOI GRGCYC 1 cut(s) 1101
Fsp4HI GCNGC 6 cut(s) 221, 480, 483, 582, 585, 594
FspBI CTAG 3 cut(s) 179, 953, 960
FspI TGCGCA 1 cut(s) 119
GlaI GCGC 2 cut(s) 119, 134
GluI GCNGC 6 cut(s) 221, 480, 483, 582, 585, 594
HaeIII GGCC 4 cut(s) 309, 703, 724, 1230
HapII CCGG 1 cut(s) 993
HgaI GACGC 2 cut(s) 124, 521
HhaI GCGC 2 cut(s) 120, 135
Hin1II CATG 8 cut(s) 209, 308, 317, 853, 877, 1003, 1206, 1229
Hin6I GCGC 2 cut(s) 118, 133
HinP1I GCGC 2 cut(s) 118, 133
HincII GTYRAC 1 cut(s) 443
HindII GTYRAC 1 cut(s) 443
HindIII AAGCTT 2 cut(s) 140, 645
HinfI GANTC 5 cut(s) 79, 857, 956, 1072, 1158
HpaII CCGG 1 cut(s) 993
HphI GGTGA 1 cut(s) 554
Hpy166II GTNNAC 4 cut(s) 193, 443, 782, 1062
Hpy188I TCNGA 5 cut(s) 151, 682, 754, 832, 919
Hpy188III TCNNGA 8 cut(s) 59, 83, 284, 314, 522, 779, 953, 1028
Hpy8I GTNNAC 4 cut(s) 193, 443, 782, 1062
HpyCH4III ACNGT 2 cut(s) 197, 1178
HpyCH4IV ACGT 4 cut(s) 421, 439, 758, 1058
HpyF10VI GCNNNNNNNGC 8 cut(s) 115, 139, 226, 479, 590, 593, 1059, 1247
HpyF3I CTNAG 9 cut(s) 215, 347, 375, 396, 528, 566, 751, 831, 1198
HpySE526I ACGT 4 cut(s) 421, 439, 758, 1058
Hsp92II CATG 8 cut(s) 209, 308, 317, 853, 877, 1003, 1206, 1229
HspAI GCGC 2 cut(s) 118, 133
Ksp22I TGATCA 1 cut(s) 259
Kzo9I GATC 6 cut(s) 55, 259, 406, 506, 827, 914
LmnI GCTCC 2 cut(s) 364, 1090
Lsp1109I GCAGC 6 cut(s) 207, 466, 469, 568, 571, 580
LweI GCATC 2 cut(s) 307, 979
MaeI CTAG 3 cut(s) 179, 953, 960
MaeII ACGT 4 cut(s) 421, 439, 758, 1058
MaeIII GTNAC 2 cut(s) 293, 1103
MalI GATC 6 cut(s) 57, 261, 408, 508, 829, 916
MboI GATC 6 cut(s) 55, 259, 406, 506, 827, 914
MboII GAAGA 6 cut(s) 88, 167, 401, 429, 447, 981
MfeI CAATTG 1 cut(s) 943
MflI RGATCY 2 cut(s) 506, 827
MhlI GDGCHC 3 cut(s) 1064, 1101, 1265
MluCI AATT 7 cut(s) 4, 90, 152, 820, 943, 1135, 1143
MlyI GAGTC 1 cut(s) 866
MmeI TCCRAC 1 cut(s) 1167
MspA1I CMGCKG 1 cut(s) 641
MspI CCGG 1 cut(s) 993
MspR9I CCNGG 4 cut(s) 73, 414, 994, 1247
MunI CAATTG 1 cut(s) 943
MvaI CCWGG 3 cut(s) 73, 414, 1247
MvnI CGCG 1 cut(s) 135
MwoI GCNNNNNNNGC 8 cut(s) 115, 139, 226, 479, 590, 593, 1059, 1247
NciI CCSGG 1 cut(s) 994
NcoI CCATGG 1 cut(s) 849
NdeII GATC 6 cut(s) 55, 259, 406, 506, 827, 914
NlaIII CATG 8 cut(s) 209, 308, 317, 853, 877, 1003, 1206, 1229
NlaIV GGNNCC 4 cut(s) 14, 871, 997, 1251
NmuCI GTSAC 1 cut(s) 293
NsbI TGCGCA 1 cut(s) 119
NspI RCATGY 2 cut(s) 209, 1206
PagI TCATGA 1 cut(s) 313
PceI AGGCCT 1 cut(s) 724
PfeI GAWTC 4 cut(s) 79, 956, 1072, 1158
PfoI TCCNGGA 1 cut(s) 412
PkrI GCNGC 6 cut(s) 222, 481, 484, 583, 586, 595
PleI GAGTC 1 cut(s) 865
PpsI GAGTC 1 cut(s) 865
PpuMI RGGWCCY 1 cut(s) 13
Psp124BI GAGCTC 1 cut(s) 1101
Psp5II RGGWCCY 1 cut(s) 13
Psp6I CCWGG 3 cut(s) 71, 412, 1245
PspGI CCWGG 3 cut(s) 71, 412, 1245
PspN4I GGNNCC 4 cut(s) 14, 871, 997, 1251
PspPPI RGGWCCY 1 cut(s) 13
PstI CTGCAG 2 cut(s) 487, 598
PsuI RGATCY 2 cut(s) 506, 827
PvuII CAGCTG 1 cut(s) 641
RsaI GTAC 1 cut(s) 1132
RsaNI GTAC 1 cut(s) 1131
SacI GAGCTC 1 cut(s) 1101
SatI GCNGC 6 cut(s) 221, 480, 483, 582, 585, 594
Sau3AI GATC 6 cut(s) 55, 259, 406, 506, 827, 914
SchI GAGTC 1 cut(s) 866
ScrFI CCNGG 4 cut(s) 73, 414, 994, 1247
SduI GDGCHC 3 cut(s) 1064, 1101, 1265
SfaNI GCATC 2 cut(s) 307, 979
SfcI CTRYAG 3 cut(s) 483, 594, 1153
SinI GGWCC 7 cut(s) 13, 103, 524, 685, 870, 996, 1149
Sse9I AATT 7 cut(s) 4, 90, 152, 820, 943, 1135, 1143
SseBI AGGCCT 1 cut(s) 724
SsiI CCGC 2 cut(s) 65, 463
SspI AATATT 1 cut(s) 553
SspMI CTAG 3 cut(s) 179, 953, 960
SstI GAGCTC 1 cut(s) 1101
StuI AGGCCT 1 cut(s) 724
StyD4I CCNGG 4 cut(s) 71, 412, 992, 1245
StyI CCWWGG 1 cut(s) 849
TaaI ACNGT 2 cut(s) 197, 1178
TaiI ACGT 4 cut(s) 424, 442, 761, 1061
TaqI TCGA 2 cut(s) 84, 910
TasI AATT 7 cut(s) 4, 90, 152, 820, 943, 1135, 1143
TfiI GAWTC 4 cut(s) 79, 956, 1072, 1158
TscAI CASTG 4 cut(s) 397, 579, 1055, 1217
TseFI GTSAC 1 cut(s) 293
TseI GCWGC 6 cut(s) 220, 479, 482, 581, 584, 593
Tsp45I GTSAC 1 cut(s) 293
TspDTI ATGAA 5 cut(s) 17, 293, 357, 918, 975
TspRI CASTG 4 cut(s) 397, 579, 1055, 1217
VneI GTGCAC 1 cut(s) 1060
VpaK11BI GGWCC 7 cut(s) 13, 103, 524, 685, 870, 996, 1149
XagI CCTNNNNNAGG 1 cut(s) 20
XapI RAATTY 3 cut(s) 4, 152, 1143
XbaI TCTAGA 1 cut(s) 952
XceI RCATGY 2 cut(s) 209, 1206
XcmI CCANNNNNNNNNTGG 1 cut(s) 237
XspI CTAG 3 cut(s) 179, 953, 960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.