FvH4_3g40520

CW-type Zinc Finger

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
34177186 .. 34184266
7081 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g40520.t5

Sequence Viewer

Length: 2904 bp
ATGGGGACCAAGATTTGCATGAATGTTTCGTGTGGGACGAGTAATACGCATGAATGGAAGAATGGCTGGCCTTTGCGATCTGGTGGATTTGCCCATCTCTGCTACAAGTGTGGAGCCGCGTATGAGAAGTCAGTTTTCTGCGATACGTTTCATATAGGGGAAACGGGTTGGAGGGACTGCAGTTCGTGCCACAAGCCTCTCCATTGTGGATGCGTAGCCTCTAGGTCTTTATATGAGTGCCTGGATTACGGGGGTGTAGGGTGCATTGGCTGTGCAAACAGTTCTCAACCTCGTGTGATCCCGAGGAATGATGTCCTCAATGGTTTTGGTGGACTGGCATTAAGTAATGCCGGTGATCGAAATTCCAGTTCTGTTGAATATAGAACTGTTGGTGATACTGTTGATGAAGGAAAATTTTTGCAGTTGTGTGGTACTGTTGATGAGGGAAAGCTTCTGCAATTATGCAAGATCATGGAGGCTAATGAGTCCACCCTTTTGCCTCAATCTCCGACAGGTGAAGAAAGTGTGTTTCTTGAATCCAATCTTTTGCCTCAACCTCAGAGAGATGATAAAATTGAATCCCTTGGCCAAACCAAAGGACAAGAAGTCATTCATCAAATAGGAGAAGTTAGCCCAGGATTTTTTAGTCCCACCCAGTCATCTATTGGATCGTTAACATTTGCAGCCCAACCAGACAATGGCAGAACAATGTTAGAGGTCAACCATATGAGTATACCATCCTCTCAGCCATCTTTGAGTATGTCCCTGTGTGCCCCATCTGCAACTTCAAATTTTATACAACCCTTTTCTGGGGGCCACATGGATATAAGAGATCAGAGTAAGACACCTTCTGCCTTCCAACAGGTGAAACCTCGTCCTATTTTGCCCAGACCTTTGCAACCTCCCCTCCCCCCTGTGAGTTCTGAGACAAATAGAAGTGTGCGCATTGCGAGACCACCTACTGAAGGACGGGGGAGGAATCAGTTACTTCCCCGATACTGGCCGCGGATTACAGACCAAGAGCTGCAGAAGTTATCTGGAGCTTTGAATTCTACTATTGTGCCACTGTTTGAGAAAGTGCTGAGTGCCAGTGATGCTGGTCGAATTGGTCGCTTGGTTCTCCCAAAAGCATGTGCCGAGGCATATTTTCCTCCTATTTCTCACTCAGAAGGCCTTCCTCTAAGGATTCAAGATGTGAAGGGAAATGAGTGGACATTTCAGTTCAGATTTTGGCCAAATAATAATAGCAGGATGTATGTTTTAGAAGGTGTGACTCCTTGCATACAGTCAATGCAACTGCAAGCTGGTGATACTGTGACATTCAGTCGTATAGATCCTGGAAACAAGCTTGTCATAGGGTTTCGAAAGGCATCGCAATCTGTAAATATGCAGGGACCTCAAACTTCTGTCCTTCAAAATGGCACACCTGGGGAAACATCCTTTTCTAGTGAGAATCTGGCTACTGGAAGTGGTGACTCTAGTCTTTTCCATATGAATAAAGGAAGCAAGGATCCTCCCTTAAATTCTCCATCAGACCATCATTTGGCTGAGTGGGATACGTATATGCAGAATCGTGAGAACAGTGGTCACAGAACAAGTGAGGATTTGTTGCAGCCAGCGTCAAATTCTGAGAAAAAGAGGACACGGAACATTGGGCCTAAAAGTAAGAGGTTGCTCATGCATAGTGAAGATGTTATGGAGCTGAGGCTGACATGGGAAGAAGCACAAGACTTGCTCCGTCCACCGCCAAGTGTCAAACCAAGCATTGTCACTATTGAAGATTTTGAATTTGAAGAGTATGATGAGCCGCCAGTTTTTGGAAAGAGATCTATATTCACTGCCGGGCCATCGAAGAGACGGGAACAGTGGGCTCAGTGCGATGATTGCTCCAAGTGGCGGATGTTGCCTGTCGATGTTCTTCTTCCTCCAAAGTGGACATGCTCAGAAAATTCCTGGGATTCAAGCAGGTCCTCATGTACTGCACCGGAGGAGATGAGCTCAAAGCAATTGGATAATCTTCTGAGTTCATCTGTATCCCTTAAAGGTTTGAAGAAGAGACGAAAAATCATTGAGAAGAAGAATGCTGAAGAACAGGAACCTTCTGGCTTGGATGCCCTGGCTAGTGCTGCTATTCTGGGAGATAATGTGCGTGAATCAGGGGAACAATCAGTTGGAGCCACTACCAAACATCCCCGTCACCGCCCTGGTTGCACTTGCATAGTGTGTATTCAACCCCCAAGTGGGAAGGGCAAGCACAAGCCATCATGCAAATGCAATGTGTGCTTGACAGTGAAACGGCGCTTTACAACCATGATGCAGCGGAAGTATGAGAAGCGTCAATTAGAACGCGAAGCAGAGAATTCCCAGAGGAACAATGGCAACAACAAGGATGAATCAGAAGTGAATGGCACCACATCGGGAGATGCTATGCTGCATAGGAATAACTCAGCAAACAATTCCCAGAGGAACAATAACAACCACAAGGATGAATCAGAAATAAATGGCACCACATCGGGAGATGCTGCATTGCATAGGAATCACTCATCAGAGAATGGAGCCAGCAGCAGCCAGAGTAGAACTCAAGCAGATGCTGCTGAAAGTTCCAGTGCCGGGCAAATTGACCTGAATTGTGAACCCTCTGGTTTGTTCAGGAACCCCACACTTCAAGATCTCTTCAAGCTTGCTAAAGCTGCCTCCGCCGCCCGACCATCGGAGAAGTATACAAATGAAAATTCCCTCAGAACCATGATGGACGAGGAACAAGCTGGTCTTGCTTCTTGTTCACTTAAGCAAGCCAATGGTGACAATGAGAGACAACTGCCTAATGAAGCTCACCTTTCATCCGTGTCATGGGACTGCCCGAGTATAGGTGATAAGGTTTACCGTGAGCCTGATTTAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

968

Amino Acids

106.4

Weight (kDa)

6.55

Isoelectric Point (pI)

56.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf_VAL1_N PF25813 49 - 96 1.2e-21 VAL1-like, N-terminal zinc finger domain
B3 PF02362 357 - 457 2.1e-16 B3 DNA binding domain
zf-CW PF07496 622 - 664 8.4e-12 CW-type Zinc Finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 944
Acc36I ACCTGC 1 cut(s) 1956
AccB1I GGYRCC 2 cut(s) 2408, 2504
AccB7I CCANNNNNTGG 3 cut(s) 698, 1543, 1817
AccI GTMKAC 2 cut(s) 733, 2720
AccII CGCG 3 cut(s) 119, 1006, 2349
AclWI GGATC 5 cut(s) 292, 676, 1328, 1505, 1518
AcoI YGGCCR 3 cut(s) 586, 1001, 1232
AcuI CTGAAG 2 cut(s) 984, 2106
AfaI GTAC 2 cut(s) 433, 1978
AflII CTTAAG 1 cut(s) 2786
AhdI GACNNNNNGTC 2 cut(s) 605, 1323
AjnI CCWGG 7 cut(s) 240, 634, 1336, 1426, 1952, 2115, 2203
AjuI GAANNNNNNNTTGG 2 cut(s) 2154, 2186
Alw21I GWGCWC 1 cut(s) 2000
Alw26I GTCTC 5 cut(s) 920, 946, 1849, 2050, 2806
AlwI GGATC 5 cut(s) 292, 676, 1328, 1505, 1518
AlwNI CAGNNNCTG 1 cut(s) 2591
Ama87I CYCGRG 2 cut(s) 301, 2860
AoxI GGCC 8 cut(s) 68, 586, 814, 1001, 1171, 1232, 1655, 1844
Asp700I GAANNNNTTC 2 cut(s) 609, 1173
AspLEI GCGC 2 cut(s) 945, 2301
AspS9I GGNCC 6 cut(s) 6, 814, 1394, 1655, 1844, 1968
AsuC2I CCSGG 2 cut(s) 1843, 2611
AsuII TTCGAA 1 cut(s) 1363
AvaI CYCGRG 2 cut(s) 301, 2860
AvaII GGWCC 3 cut(s) 6, 1394, 1968
BaeGI GKGCMC 1 cut(s) 775
BalI TGGCCA 2 cut(s) 588, 1234
BamHI GGATCC 1 cut(s) 1510
BanI GGYRCC 2 cut(s) 2408, 2504
BanII GRGCYC 2 cut(s) 1873, 2000
BarI GAAGNNNNNNTAC 2 cut(s) 832, 864
BauI CACGAG 1 cut(s) 291
Bbv12I GWGCWC 1 cut(s) 2000
BbvCI CCTCAGC 1 cut(s) 1703
BceAI ACGGC 1 cut(s) 2312
BciT130I CCWGG 7 cut(s) 242, 636, 1338, 1428, 1954, 2117, 2205
BciVI GTATCC 2 cut(s) 1549, 2044
BcnI CCSGG 2 cut(s) 1843, 2611
BcoDI GTCTC 5 cut(s) 920, 946, 1849, 2050, 2806
BfaI CTAG 4 cut(s) 222, 1446, 1479, 2121
BfmI CTRYAG 2 cut(s) 178, 1025
BfoI RGCGCY 1 cut(s) 2302
BfrI CTTAAG 1 cut(s) 2786
BfuAI ACCTGC 1 cut(s) 1956
BfuI GTATCC 2 cut(s) 1549, 2044
BglII AGATCT 2 cut(s) 1826, 2668
Bme1390I CCNGG 9 cut(s) 242, 636, 1338, 1428, 1843, 1954, 2117, 2205, 2611
Bme18I GGWCC 3 cut(s) 6, 1394, 1968
BmeRI GACNNNNNGTC 2 cut(s) 605, 1323
BmeT110I CYCGRG 2 cut(s) 301, 2860
BmgT120I GGNCC 6 cut(s) 6, 814, 1394, 1655, 1844, 1968
BmrFI CCNGG 9 cut(s) 242, 636, 1338, 1428, 1843, 1954, 2117, 2205, 2611
BmrI ACTGGG 1 cut(s) 649
BmsI GCATC 8 cut(s) 200, 1084, 1379, 2101, 2304, 2413, 2509, 2578
BmuI ACTGGG 1 cut(s) 649
BoxI GACNNNNGTC 1 cut(s) 1479
BplI GAGNNNNNCTC 4 cut(s) 1982, 2014, 2563, 2595
BpmI CTGGAG 1 cut(s) 1059
Bpu10I CCTNAGC 1 cut(s) 1703
Bpu14I TTCGAA 1 cut(s) 1363
BpuEI CTTGAG 1 cut(s) 2565
BpuMI CCSGG 2 cut(s) 1843, 2611
BsaAI YACGTR 1 cut(s) 1560
BsaI GGTCTC 1 cut(s) 946
BsaJI CCNNGG 9 cut(s) 302, 583, 634, 1004, 1137, 1427, 1953, 2115, 2203
BsaWI WCCGGW 1 cut(s) 1984
BsaXI ACNNNNNCTCC 4 cut(s) 891, 921, 2130, 2160
Bse118I RCCGGY 1 cut(s) 350
Bse1I ACTGG 8 cut(s) 339, 366, 655, 1004, 1089, 1468, 1811, 2604
Bse3DI GCAATG 3 cut(s) 945, 2281, 2525
BseBI CCWGG 7 cut(s) 242, 636, 1338, 1428, 1954, 2117, 2205
BseDI CCNNGG 9 cut(s) 302, 583, 634, 1004, 1137, 1427, 1953, 2115, 2203
BseMI GCAATG 3 cut(s) 945, 2281, 2525
BseNI ACTGG 8 cut(s) 339, 366, 655, 1004, 1089, 1468, 1811, 2604
BseRI GAGGAG 1 cut(s) 2003
BseSI GKGCMC 1 cut(s) 775
BsgI GTGCAG 1 cut(s) 1965
Bsh1236I CGCG 3 cut(s) 119, 1006, 2349
BshFI GGCC 8 cut(s) 70, 588, 816, 1003, 1173, 1234, 1657, 1846
BshNI GGYRCC 2 cut(s) 2408, 2504
BsiHKAI GWGCWC 1 cut(s) 2000
BsiHKCI CYCGRG 2 cut(s) 301, 2860
BsiSI CCGG 4 cut(s) 351, 1842, 1985, 2610
BslFI GGGAC 7 cut(s) 19, 49, 188, 633, 748, 1407, 2867
BsmAI GTCTC 5 cut(s) 920, 946, 1849, 2050, 2806
BsmBI CGTCTC 2 cut(s) 1849, 2050
BsmFI GGGAC 7 cut(s) 19, 49, 188, 633, 748, 1407, 2867
BsmI GAATGC 1 cut(s) 2086
BsnI GGCC 8 cut(s) 70, 588, 816, 1003, 1173, 1234, 1657, 1846
Bso31I GGTCTC 1 cut(s) 946
BsoBI CYCGRG 2 cut(s) 301, 2860
Bsp119I TTCGAA 1 cut(s) 1363
Bsp1286I GDGCHC 3 cut(s) 775, 1873, 2000
BspANI GGCC 8 cut(s) 70, 588, 816, 1003, 1173, 1234, 1657, 1846
BspFNI CGCG 3 cut(s) 119, 1006, 2349
BspMAI CTGCAG 2 cut(s) 182, 1029
BspMI ACCTGC 1 cut(s) 1956
BspPI GGATC 5 cut(s) 292, 676, 1328, 1505, 1518
BspT104I TTCGAA 1 cut(s) 1363
BspT107I GGYRCC 2 cut(s) 2408, 2504
BspTI CTTAAG 1 cut(s) 2786
BspTNI GGTCTC 1 cut(s) 946
BsrDI GCAATG 3 cut(s) 945, 2281, 2525
BsrFI RCCGGY 1 cut(s) 350
BsrI ACTGG 8 cut(s) 339, 366, 655, 1004, 1089, 1468, 1811, 2604
BssAI RCCGGY 1 cut(s) 350
BssECI CCNNGG 9 cut(s) 302, 583, 634, 1004, 1137, 1427, 1953, 2115, 2203
BssNAI GTATAC 2 cut(s) 734, 2721
BssSI CACGAG 1 cut(s) 291
BssT1I CCWWGG 1 cut(s) 583
Bst1107I GTATAC 2 cut(s) 734, 2721
Bst2BI CACGAG 1 cut(s) 291
Bst2UI CCWGG 7 cut(s) 242, 636, 1338, 1428, 1954, 2117, 2205
Bst6I CTCTTC 4 cut(s) 1788, 1847, 2048, 2678
BstAFI CTTAAG 1 cut(s) 2786
BstAPI GCANNNNNTGC 3 cut(s) 186, 2280, 2591
BstBAI YACGTR 1 cut(s) 1560
BstBI TTCGAA 1 cut(s) 1363
BstC8I GCNNGC 7 cut(s) 68, 1302, 1617, 2252, 2560, 2682, 2793
BstDSI CCRYGG 1 cut(s) 1004
BstENI CCTNNNNNAGG 1 cut(s) 963
BstFNI CGCG 3 cut(s) 119, 1006, 2349
BstH2I RGCGCY 1 cut(s) 2302
BstHHI GCGC 2 cut(s) 945, 2301
BstMAI GTCTC 5 cut(s) 920, 946, 1849, 2050, 2806
BstNI CCWGG 7 cut(s) 242, 636, 1338, 1428, 1954, 2117, 2205
BstNSI RCATGY 2 cut(s) 1134, 1941
BstPAI GACNNNNGTC 1 cut(s) 1479
BstSCI CCNGG 9 cut(s) 240, 634, 1336, 1426, 1841, 1952, 2115, 2203, 2609
BstSFI CTRYAG 2 cut(s) 178, 1025
BstSLI GKGCMC 1 cut(s) 775
BstSNI TACGTA 1 cut(s) 1560
BstUI CGCG 3 cut(s) 119, 1006, 2349
BstX2I RGATCY 4 cut(s) 1333, 1510, 1826, 2668
BstYI RGATCY 4 cut(s) 1333, 1510, 1826, 2668
BstZ17I GTATAC 2 cut(s) 734, 2721
BsuI GTATCC 2 cut(s) 1549, 2044
BsuRI GGCC 8 cut(s) 70, 588, 816, 1003, 1173, 1234, 1657, 1846
BtgI CCRYGG 1 cut(s) 1004
BtgZI GCGATG 2 cut(s) 1356, 1893
BtsI GCAGTG 1 cut(s) 1836
BtsIMutI CAGTG 8 cut(s) 1064, 1096, 1588, 1836, 1871, 1880, 2295, 2611
BveI ACCTGC 1 cut(s) 1956
Cac8I GCNNGC 7 cut(s) 68, 1302, 1617, 2252, 2560, 2682, 2793
CaiI CAGNNNCTG 1 cut(s) 2591
CfoI GCGC 2 cut(s) 945, 2301
Cfr10I RCCGGY 1 cut(s) 350
Cfr13I GGNCC 6 cut(s) 6, 814, 1394, 1655, 1844, 1968
Cfr42I CCGCGG 1 cut(s) 1007
CseI GACGC 2 cut(s) 1608, 2324
Csp6I GTAC 2 cut(s) 432, 1977
CviQI GTAC 2 cut(s) 432, 1977
DriI GACNNNNNGTC 2 cut(s) 605, 1323
EaeI YGGCCR 3 cut(s) 586, 1001, 1232
Eam1104I CTCTTC 4 cut(s) 1788, 1847, 2048, 2678
Eam1105I GACNNNNNGTC 2 cut(s) 605, 1323
EarI CTCTTC 4 cut(s) 1788, 1847, 2048, 2678
EciI GGCGGA 2 cut(s) 1912, 2686
Ecl136II GAGCTC 1 cut(s) 1998
Eco105I TACGTA 1 cut(s) 1560
Eco130I CCWWGG 1 cut(s) 583
Eco147I AGGCCT 1 cut(s) 1173
Eco24I GRGCYC 2 cut(s) 1873, 2000
Eco31I GGTCTC 1 cut(s) 946
Eco47I GGWCC 3 cut(s) 6, 1394, 1968
Eco53kI GAGCTC 1 cut(s) 1998
Eco57I CTGAAG 2 cut(s) 984, 2106
Eco88I CYCGRG 2 cut(s) 301, 2860
EcoICRI GAGCTC 1 cut(s) 1998
EcoNI CCTNNNNNAGG 1 cut(s) 963
EcoO109I RGGNCCY 2 cut(s) 1394, 1968
EcoRI GAATTC 2 cut(s) 1048, 2359
EcoRII CCWGG 7 cut(s) 240, 634, 1336, 1426, 1952, 2115, 2203
EcoT14I CCWWGG 1 cut(s) 583
EcoT22I ATGCAT 1 cut(s) 1683
EcoT38I GRGCYC 2 cut(s) 1873, 2000
ErhI CCWWGG 1 cut(s) 583
Esp3I CGTCTC 2 cut(s) 1849, 2050
FalI AAGNNNNNCTT 4 cut(s) 2754, 2786, 2820, 2852
FaqI GGGAC 7 cut(s) 19, 49, 188, 633, 748, 1407, 2867
FauNDI CATATG 2 cut(s) 726, 1491
FblI GTMKAC 2 cut(s) 733, 2720
FriOI GRGCYC 2 cut(s) 1873, 2000
FspAI RTGCGCAY 1 cut(s) 944
FspBI CTAG 4 cut(s) 222, 1446, 1479, 2121
FspI TGCGCA 1 cut(s) 944
GlaI GCGC 2 cut(s) 944, 2300
GsuI CTGGAG 1 cut(s) 1059
HaeII RGCGCY 1 cut(s) 2302
HaeIII GGCC 8 cut(s) 70, 588, 816, 1003, 1173, 1234, 1657, 1846
HapII CCGG 4 cut(s) 351, 1842, 1985, 2610
HgaI GACGC 2 cut(s) 1608, 2324
HhaI GCGC 2 cut(s) 945, 2301
Hin6I GCGC 2 cut(s) 943, 2299
HinP1I GCGC 2 cut(s) 943, 2299
HincII GTYRAC 2 cut(s) 675, 721
HindII GTYRAC 2 cut(s) 675, 721
HindIII AAGCTT 3 cut(s) 449, 1346, 2678
HpaI GTTAAC 1 cut(s) 675
HpaII CCGG 4 cut(s) 351, 1842, 1985, 2610
Hpy188III TCNNGA 9 cut(s) 301, 533, 1038, 1190, 1574, 2418, 2514, 2650, 2666
HpyCH4IV ACGT 2 cut(s) 146, 1559
HpySE526I ACGT 2 cut(s) 146, 1559
HspAI GCGC 2 cut(s) 943, 2299
KspAI GTTAAC 1 cut(s) 675
KspI CCGCGG 1 cut(s) 1007
LmnI GCTCC 7 cut(s) 113, 1040, 1699, 1740, 1892, 2174, 2555
LweI GCATC 8 cut(s) 200, 1084, 1379, 2101, 2304, 2413, 2509, 2578
MaeI CTAG 4 cut(s) 222, 1446, 1479, 2121
MaeII ACGT 2 cut(s) 146, 1559
MaeIII GTNAC 8 cut(s) 984, 1270, 1315, 1472, 1586, 1768, 2195, 2801
MfeI CAATTG 1 cut(s) 2006
MflI RGATCY 4 cut(s) 1333, 1510, 1826, 2668
MhlI GDGCHC 3 cut(s) 775, 1873, 2000
MlsI TGGCCA 2 cut(s) 588, 1234
MluNI TGGCCA 2 cut(s) 588, 1234
MlyI GAGTC 3 cut(s) 494, 1267, 1469
MmeI TCCRAC 4 cut(s) 149, 533, 883, 2152
Mox20I TGGCCA 2 cut(s) 588, 1234
Mph1103I ATGCAT 1 cut(s) 1683
MroXI GAANNNNTTC 2 cut(s) 609, 1173
MscI TGGCCA 2 cut(s) 588, 1234
MseI TTAA 5 cut(s) 341, 674, 1520, 2040, 2787
MslI CAYNNNNRTG 2 cut(s) 2269, 2484
Msp20I TGGCCA 2 cut(s) 588, 1234
MspA1I CMGCKG 2 cut(s) 1006, 2320
MspCI CTTAAG 1 cut(s) 2786
MspI CCGG 4 cut(s) 351, 1842, 1985, 2610
MspR9I CCNGG 9 cut(s) 242, 636, 1338, 1428, 1843, 1954, 2117, 2205, 2611
MunI CAATTG 1 cut(s) 2006
Mva1269I GAATGC 1 cut(s) 2086
MvaI CCWGG 7 cut(s) 242, 636, 1338, 1428, 1954, 2117, 2205
MvnI CGCG 3 cut(s) 119, 1006, 2349
NciI CCSGG 2 cut(s) 1843, 2611
NdeI CATATG 2 cut(s) 726, 1491
NmeAIII GCCGAG 1 cut(s) 1162
NmuCI GTSAC 7 cut(s) 1270, 1315, 1472, 1586, 1768, 2195, 2801
NsbI TGCGCA 1 cut(s) 944
NsiI ATGCAT 1 cut(s) 1683
NspI RCATGY 2 cut(s) 1134, 1941
NspV TTCGAA 1 cut(s) 1363
PceI AGGCCT 1 cut(s) 1173
PcsI WCGNNNNNNNCGW 1 cut(s) 35
PctI GAATGC 1 cut(s) 2086
PdmI GAANNNNTTC 2 cut(s) 609, 1173
PflMI CCANNNNNTGG 3 cut(s) 698, 1543, 1817
PfoI TCCNGGA 1 cut(s) 1336
PleI GAGTC 3 cut(s) 493, 1267, 1469
PpsI GAGTC 3 cut(s) 493, 1267, 1469
Ppu21I YACGTR 1 cut(s) 1560
PpuMI RGGWCCY 2 cut(s) 1394, 1968
PshAI GACNNNNGTC 1 cut(s) 1479
Psp124BI GAGCTC 1 cut(s) 2000
Psp5II RGGWCCY 2 cut(s) 1394, 1968
Psp6I CCWGG 7 cut(s) 240, 634, 1336, 1426, 1952, 2115, 2203
PspGI CCWGG 7 cut(s) 240, 634, 1336, 1426, 1952, 2115, 2203
PspPI GGNCC 6 cut(s) 6, 814, 1394, 1655, 1844, 1968
PspPPI RGGWCCY 2 cut(s) 1394, 1968
PstI CTGCAG 2 cut(s) 182, 1029
PstNI CAGNNNCTG 1 cut(s) 2591
PsuI RGATCY 4 cut(s) 1333, 1510, 1826, 2668
RsaI GTAC 2 cut(s) 433, 1978
RsaNI GTAC 2 cut(s) 432, 1977
RseI CAYNNNNRTG 2 cut(s) 2269, 2484
SacI GAGCTC 1 cut(s) 2000
SacII CCGCGG 1 cut(s) 1007
SaqAI TTAA 5 cut(s) 341, 674, 1520, 2040, 2787
Sau96I GGNCC 6 cut(s) 6, 814, 1394, 1655, 1844, 1968
SchI GAGTC 3 cut(s) 494, 1267, 1469
ScrFI CCNGG 9 cut(s) 242, 636, 1338, 1428, 1843, 1954, 2117, 2205, 2611
SduI GDGCHC 3 cut(s) 775, 1873, 2000
SfaNI GCATC 8 cut(s) 200, 1084, 1379, 2101, 2304, 2413, 2509, 2578
SfcI CTRYAG 2 cut(s) 178, 1025
Sfr303I CCGCGG 1 cut(s) 1007
SfuI TTCGAA 1 cut(s) 1363
SgrBI CCGCGG 1 cut(s) 1007
SinI GGWCC 3 cut(s) 6, 1394, 1968
SmiMI CAYNNNNRTG 2 cut(s) 2269, 2484
SmlI CTYRAG 2 cut(s) 2580, 2786
SmoI CTYRAG 2 cut(s) 2580, 2786
SnaBI TACGTA 1 cut(s) 1560
SseBI AGGCCT 1 cut(s) 1173
SspMI CTAG 4 cut(s) 222, 1446, 1479, 2121
SstI GAGCTC 1 cut(s) 2000
StuI AGGCCT 1 cut(s) 1173
StyD4I CCNGG 9 cut(s) 240, 634, 1336, 1426, 1841, 1952, 2115, 2203, 2609
StyI CCWWGG 1 cut(s) 583
TaiI ACGT 2 cut(s) 149, 1562
TaqI TCGA 5 cut(s) 358, 1102, 1363, 1850, 1911
TatI WGTACW 1 cut(s) 1976
TauI GCSGC 4 cut(s) 119, 1006, 1810, 2702
Tru1I TTAA 5 cut(s) 341, 674, 1520, 2040, 2787
Tru9I TTAA 5 cut(s) 341, 674, 1520, 2040, 2787
TscAI CASTG 8 cut(s) 1071, 1096, 1588, 1843, 1871, 1880, 2295, 2611
TseFI GTSAC 7 cut(s) 1270, 1315, 1472, 1586, 1768, 2195, 2801
Tsp45I GTSAC 7 cut(s) 1270, 1315, 1472, 1586, 1768, 2195, 2801
TspGWI ACGGA 3 cut(s) 1660, 1727, 2833
TspRI CASTG 8 cut(s) 1071, 1096, 1588, 1843, 1871, 1880, 2295, 2611
Van91I CCANNNNNTGG 3 cut(s) 698, 1543, 1817
Vha464I CTTAAG 1 cut(s) 2786
VpaK11BI GGWCC 3 cut(s) 6, 1394, 1968
XagI CCTNNNNNAGG 1 cut(s) 963
XceI RCATGY 2 cut(s) 1134, 1941
XcmI CCANNNNNNNNNTGG 3 cut(s) 662, 695, 2372
XmiI GTMKAC 2 cut(s) 733, 2720
XmnI GAANNNNTTC 2 cut(s) 609, 1173
XspI CTAG 4 cut(s) 222, 1446, 1479, 2121
Zsp2I ATGCAT 1 cut(s) 1683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.