Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0006399

Physical Location & Seq

Genomic Coordinates Forward (+)

4539419 .. 4545301

Gene Structure 5883 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1053500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2670 bp

ATGGAGTCCAAGATTTGCATGAATCCTTCGTGTAGGATGGCCAATACGCACGAATGGAAGACAGGTTGGCCTTTGCGATCCGGTGGTTTTGCCCATCTCTGCTACAAGTGCGGAGTTGAGTATGAGAATTCAGTTTACTGCAATACATTCCATTCTGGGGAAACTGGTTGGAGGGACTGCAATTTGTGCCACAAGCCTCTCCACTGTGGATGCATAGTCTCAGAGACATTGTATGAGTGCCTGGATTTTGGAGGTATAGGGTGCATTGGCTGTGCTTCTCAACCTCACGTGATTCAGGATGGTGATGTTTTAAATGGATTTGGTGGATTGAAAATAAGTGATTTCGGTGATCACCAATCAACTGTTCCTCAGAATGGAGCATTAAGTGATACTGCTAATGAGGGAGAACTTTTGCAATTGTGCCAAGTCATGGAAGCTAATGAATCCAACCTTTCGTCTCAATCTCAGAGAGGTGAAATAAATGTATCTCCTGTGCAAACCAAACGAGAAGAAGTTACTTATCCAAGGGGGGAAGTTGGCCCAGGATTTTCTAGTATCACTAGGCCATCTTTTGGATCATTAACATTTGCCAAACCAGACAATGGTAGAATAATGATAGAGGTCAAAGATATGAATAAGTCGTCCTCTGAGCCGTCTTTGAGTATGACTTTGGGAGGCCCATCTGCTACTCCAAACTTTGCTCAACCCTTTACTGGGGGAATTTTGGAGAGAAGAGATCAGAGCAAGATGTCTTCTTCCTTCCAACAGGGGCAAAAAATTCGGCCTATTTTTCCCAGACCCTTGAGACCTCCCCCTCCTATCCATAATGTGCGTGTTGCAAGGCCACCTGCTGAAGGGCGAGGGAAGAGTCAGTTACTTCCTCGATACTGGCCAAGGATTACTGACCAAGAGCTGCAGAAATTAGCTGGAGATTTGAATTCTACTATTGTGCCACTGTTCGAGAAGGTATTGAGTGCCAGTGATGCAGGTCGAATTGGTCGTCTGGTTCTCCCAAAAGCATGTGCTGAGGCATACTTTCCTCCTATTTCTCAATCAGAAGGCCTTCCTATAAGGATTCAAGATGTCAAGGGTAATGAATGGACGTTTCAGTTCAGATTTTGGCCAAATAATAATAGCAGGATGTATGTTTTAGAAGGAGTAACGCCTTGCATACAGTCTATGGAACTTCAAGCTGGTGATACTGTGACATTCAGTCGGATAGACCCCGGAGGCAGACTTGTAATTGGGTTTCGTAAGGCATCAAGATGTTTAGATGTGCAGGAATCCCAAACATCTTTCCTTCCCAATGGAACTCCTGGGGAAACTTCCTGTCCTAGCGTTGTTGAGAATCTGGTAACAGGAAGTGGTCACTCTAGTATTTATCAAATGAGTACAGGAAGCAAAGACCTAAATGCTCTATCAGGACATTTGCATTTGGCTGATGGGGATACAAGTTTGCATAGTAATGAGAACCATAGTCACTTTACAAGTGAGGATCTGCAGCAGAAGCCTGTGTCGAATTCTGACAAGAAGAGGGCCCGAAATATTGGGCCTAAAAGTAAGAGGTTGCTCTTGCATAGTGAAGATGTTCTGGAGCTGAGACTGACATGGGAAGAAGCACAGGACTTGCTTCGTCCACCCCTGAGTGTCAAACCAAGCATTGTCACTATAGAAGATCATGAATTCGAAGAGTATGATGAGCCCCCAGTTTTTGGGAAGAGATCTCTATTCATTGCCGAATCTGAGAGACAGGAACAATGGGCTCGGTGTGATGATTGTTCCAAGTGGCGGAGGTTGCCTGTTGACGTTCTTCTTCCTCCAAAGTGGACGTGCTTTGAAAATTCTTGGGATATAAACAGGTGCTCATGTTCTGCACCAGAGGAGGTGAGCCAAGAGGAATTGGATAATCTTCTAAGACCAAGCAAAGATTTAAAGAAGCGAAGAATCGTAGTGAACCATAATGAAGCCCAGGAACACGAACCTTCTGGCTTGGATGCCCTGGCTAGTGCTAGTGCTGCCATTCTGGGAGATAGTGTGGATTACGCTGATGAACAATCAGTTGGAGCCACAACCAGACATCCGCGCCATCGCCCAGGTTGCACTTGCATAGTATGTATTCAACCCCCAAGCGGGAAGGGCAAGCACAAGCCAACATGCACATGCAACGTATGCATGACAGTAAAACGGCGCTTCAAAACCCTGATGATGAACAAGAGGAAACGCAAATCAGAACGTGAAATGGAGAATGCCCACAGGGATAATAATGACCACAAGGACGAATCAGAAATGAATGGCATGTCAACAGAGATTGAGTTGCATATGAATCACTCATCGGAGAATGGAAGCAGCTGCGAGAAGAGAATTCAAGCTGACGTGGCAGAAAGTTCATGCGCTGGACAAATTGATCTGAATTGTGAGCCCAAACACAATTATGTGCAGGTTTCAGGATTGACCTTGTTGAGACTTGCTGACGCCGTTGCTCAACAACCAGTAAAGAACAGCACGAAGGAAAGTGGCCTCACAAACAGAATGTGCGAGCCACAGGCCGGTCTTGGTTCTTCTTTACGTGCACAAGATACTGCGGAGACTGATAAACTCCTGTGTAATGAAGGCAGCCTTTCATCCGTTGCAGCGGCGTGGGACTTGGAGGGTAGAGGTGATGAGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B3 zf-CW

Protein Analysis

890

Amino Acids

98.37

Weight (kDa)

5.91

Isoelectric Point (pI)

54.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf_VAL1_N	PF25813	49 - 96	7.1e-22	VAL1-like, N-terminal zinc finger domain
B3	PF02362	320 - 420	1.3e-16	B3 DNA binding domain
zf-CW	PF07496	586 - 628	2.2e-09	CW-type Zinc Finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006399)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520
malus_domestica	MD03G1051600.v1.1 MD11G1053500.v1.1 MD11G1053700.v1.1
prunus_persica	Prupe.6G041000_v2.0.a1 Prupe.6G041000_v2.0.a1 Prupe.6G041000_v2.0.a1
pyrus_communis	pycom03g04100 pycom11g04330
rosa_chinensis	RchiOBHm_Chr5g0073201
rosa_laevigata	RLG00000036373
rosa_multiflora	Rmu_sc0001887.1_g000012
rosa_roxburghii	Rroxscaffold_1G00007990
rosa_rugosa	Rorug05G0422000 Rorug05G0422100
rosa_samantha	Rh5AG478900 Rh5BG499600 Rh5CG522800 Rh5DG511700
rosa_wichuraiana	Rw5G044520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	856
Acc36I	ACCTGC	3 cut(s)	856, 977, 2428
AccB7I	CCANNNNNTGG	4 cut(s)	430, 572, 602, 1712
AccII	CGCG	1 cut(s)	2083
AciI	CCGC	6 cut(s)	111, 1789, 2081, 2130, 2582, 2633
AclWI	GGATC	3 cut(s)	72, 583, 1503
AcoI	YGGCCR	3 cut(s)	39, 890, 1121
AcsI	RAATTY	8 cut(s)	127, 720, 777, 937, 1519, 1682, 1840, 2361
AcuI	CTGAAG	1 cut(s)	873
AcvI	CACGTG	1 cut(s)	289
AcyI	GRCGYC	1 cut(s)	2472
AfaI	GTAC	1 cut(s)	1393
AgsI	TTSAA	8 cut(s)	331, 937, 1079, 1190, 1838, 2120, 2194, 2366
AhdI	GACNNNNNGTC	1 cut(s)	1212
AjiI	CACGTC	2 cut(s)	1830, 2374
AjnI	CCWGG	6 cut(s)	240, 541, 1315, 1968, 1998, 2092
AjuI	GAANNNNNNNTTGG	4 cut(s)	348, 380, 2043, 2075
AluBI	AGCT	7 cut(s)	437, 913, 926, 1193, 1597, 2349, 2369
AluI	AGCT	7 cut(s)	437, 913, 926, 1193, 1597, 2349, 2369
Alw21I	GWGCWC	2 cut(s)	1865, 2572
Alw26I	GTCTC	8 cut(s)	218, 223, 462, 799, 1594, 1741, 2455, 2579
Alw44I	GTGCAC	1 cut(s)	2568
AlwI	GGATC	3 cut(s)	72, 583, 1503
ApaI	GGGCCC	1 cut(s)	1540
ApaLI	GTGCAC	1 cut(s)	2568
ApeKI	GCWGC	7 cut(s)	913, 1501, 2015, 2346, 2349, 2613, 2630
ApoI	RAATTY	8 cut(s)	127, 720, 777, 937, 1519, 1682, 1840, 2361
ArsI	GACNNNNNNTTYG	2 cut(s)	985, 1017
Asp700I	GAANNNNTTC	2 cut(s)	1062, 1587
AspLEI	GCGC	3 cut(s)	2085, 2190, 2393
AspS9I	GGNCC	5 cut(s)	539, 677, 1536, 1537, 1550
AsuC2I	CCSGG	1 cut(s)	1227
AsuHPI	GGTGA	7 cut(s)	314, 344, 359, 485, 1208, 1897, 2669
AsuII	TTCGAA	1 cut(s)	1686
BaeGI	GKGCMC	2 cut(s)	1540, 2572
BalI	TGGCCA	3 cut(s)	41, 892, 1123
BanII	GRGCYC	4 cut(s)	1540, 1704, 1765, 2421
BbrPI	CACGTG	1 cut(s)	289
BbsI	GAAGAC	2 cut(s)	65, 744
Bbv12I	GWGCWC	2 cut(s)	1865, 2572
BbvCI	CCTCAGC	1 cut(s)	1026
BbvI	GCAGC	7 cut(s)	900, 1513, 2002, 2336, 2358, 2625, 2642
BccI	CCATC	7 cut(s)	31, 102, 293, 574, 688, 1436, 2094
BceAI	ACGGC	3 cut(s)	637, 2201, 2459
BcgI	CGANNNNNNTGC	2 cut(s)	761, 795
BciT130I	CCWGG	6 cut(s)	242, 543, 1317, 1970, 2000, 2094
BciVI	GTATCC	1 cut(s)	1441
BclI	TGATCA	1 cut(s)	349
BcnI	CCSGG	1 cut(s)	1227
BcoDI	GTCTC	8 cut(s)	218, 223, 462, 799, 1594, 1741, 2455, 2579
BfaI	CTAG	6 cut(s)	552, 561, 1335, 1374, 2004, 2010
BfmI	CTRYAG	3 cut(s)	914, 1499, 1668
BfoI	RGCGCY	1 cut(s)	2191
BfuAI	ACCTGC	3 cut(s)	856, 977, 2428
BfuI	GTATCC	1 cut(s)	1441
BglII	AGATCT	1 cut(s)	1721
BisI	GCNGC	8 cut(s)	914, 1502, 2016, 2347, 2350, 2614, 2631, 2634
BlsI	GCNGC	8 cut(s)	915, 1503, 2017, 2348, 2351, 2615, 2632, 2635
Bme1390I	CCNGG	7 cut(s)	242, 543, 1227, 1317, 1970, 2000, 2094
BmeRI	GACNNNNNGTC	1 cut(s)	1212
BmgBI	CACGTC	2 cut(s)	1830, 2374
BmgT120I	GGNCC	5 cut(s)	539, 677, 1536, 1537, 1550
BmiI	GGNNCC	2 cut(s)	1538, 2065
BmrFI	CCNGG	7 cut(s)	242, 543, 1227, 1317, 1970, 2000, 2094
BmrI	ACTGGG	2 cut(s)	723, 1700
BmsI	GCATC	4 cut(s)	200, 973, 1268, 1984
BmuI	ACTGGG	2 cut(s)	723, 1700
BpiI	GAAGAC	2 cut(s)	65, 744
BpmI	CTGGAG	2 cut(s)	948, 1613
Bpu10I	CCTNAGC	1 cut(s)	1026
Bpu14I	TTCGAA	1 cut(s)	1686
BpuEI	CTTGAG	1 cut(s)	823
BpuMI	CCSGG	1 cut(s)	1227
BsaAI	YACGTR	2 cut(s)	289, 2567
BsaHI	GRCGYC	1 cut(s)	2472
BsaI	GGTCTC	1 cut(s)	799
BsaJI	CCNNGG	8 cut(s)	524, 541, 893, 1225, 1316, 1968, 1998, 2092
BsaWI	WCCGGW	1 cut(s)	80
BsaXI	ACNNNNNCTCC	2 cut(s)	2019, 2049
Bse118I	RCCGGY	1 cut(s)	2546
Bse1I	ACTGG	6 cut(s)	169, 718, 893, 978, 1706, 2489
Bse3DI	GCAATG	1 cut(s)	1731
BseBI	CCWGG	6 cut(s)	242, 543, 1317, 1970, 2000, 2094
BseDI	CCNNGG	8 cut(s)	524, 541, 893, 1225, 1316, 1968, 1998, 2092
BseGI	GGATG	7 cut(s)	42, 215, 304, 1146, 1999, 2077, 2621
BseMI	GCAATG	1 cut(s)	1731
BseMII	CTCAG	8 cut(s)	234, 383, 479, 639, 1017, 1589, 1634, 1734
BseNI	ACTGG	6 cut(s)	169, 718, 893, 978, 1706, 2489
BseRI	GAGGAG	1 cut(s)	1895
BseSI	GKGCMC	2 cut(s)	1540, 2572
BseXI	GCAGC	7 cut(s)	900, 1513, 2002, 2336, 2358, 2625, 2642
BsgI	GTGCAG	3 cut(s)	1298, 1857, 2456
Bsh1236I	CGCG	1 cut(s)	2083
BsiHKAI	GWGCWC	2 cut(s)	1865, 2572
BsiSI	CCGG	3 cut(s)	81, 1227, 2547
BslFI	GGGAC	2 cut(s)	188, 2654
BsmAI	GTCTC	8 cut(s)	218, 223, 462, 799, 1594, 1741, 2455, 2579
BsmBI	CGTCTC	1 cut(s)	462
BsmFI	GGGAC	2 cut(s)	188, 2654
BsmI	GAATGC	1 cut(s)	2251
Bso31I	GGTCTC	1 cut(s)	799
Bsp119I	TTCGAA	1 cut(s)	1686
Bsp120I	GGGCCC	1 cut(s)	1536
Bsp1286I	GDGCHC	6 cut(s)	1540, 1704, 1765, 1865, 2421, 2572
Bsp143I	GATC	8 cut(s)	77, 349, 575, 736, 1495, 1675, 1721, 2404
BspACI	CCGC	6 cut(s)	111, 1789, 2081, 2130, 2582, 2633
BspCNI	CTCAG	8 cut(s)	233, 382, 478, 640, 1018, 1590, 1635, 1735
BspFNI	CGCG	1 cut(s)	2083
BspHI	TCATGA	1 cut(s)	1678
BspLI	GGNNCC	2 cut(s)	1538, 2065
BspMAI	CTGCAG	2 cut(s)	918, 1503
BspMI	ACCTGC	3 cut(s)	856, 977, 2428
BspPI	GGATC	3 cut(s)	72, 583, 1503
BspT104I	TTCGAA	1 cut(s)	1686
BspTNI	GGTCTC	1 cut(s)	799
BsrDI	GCAATG	1 cut(s)	1731
BsrFI	RCCGGY	1 cut(s)	2546
BsrI	ACTGG	6 cut(s)	169, 718, 893, 978, 1706, 2489
BssAI	RCCGGY	1 cut(s)	2546
BssECI	CCNNGG	8 cut(s)	524, 541, 893, 1225, 1316, 1968, 1998, 2092
BssMI	GATC	8 cut(s)	77, 349, 575, 736, 1495, 1675, 1721, 2404
BssNI	GRCGYC	1 cut(s)	2472
BssT1I	CCWWGG	2 cut(s)	524, 893
Bst2UI	CCWGG	6 cut(s)	242, 543, 1317, 1970, 2000, 2094
Bst4CI	ACNGT	6 cut(s)	206, 364, 957, 1176, 1204, 2179
Bst6I	CTCTTC	6 cut(s)	727, 860, 1526, 1683, 1712, 2351
BstACI	GRCGYC	1 cut(s)	2472
BstAPI	GCANNNNNTGC	2 cut(s)	186, 2169
BstBAI	YACGTR	2 cut(s)	289, 2567
BstBI	TTCGAA	1 cut(s)	1686
BstC8I	GCNNGC	2 cut(s)	2141, 2537
BstDEI	CTNAG	9 cut(s)	220, 369, 465, 648, 1026, 1598, 1643, 1743, 1913
BstENI	CCTNNNNNAGG	1 cut(s)	852
BstF5I	GGATG	7 cut(s)	42, 215, 304, 1146, 1999, 2077, 2621
BstFNI	CGCG	1 cut(s)	2083
BstH2I	RGCGCY	1 cut(s)	2191
BstHHI	GCGC	3 cut(s)	2085, 2190, 2393
BstKTI	GATC	8 cut(s)	80, 352, 578, 739, 1498, 1678, 1724, 2407
BstMAI	GTCTC	8 cut(s)	218, 223, 462, 799, 1594, 1741, 2455, 2579
BstMBI	GATC	8 cut(s)	77, 349, 575, 736, 1495, 1675, 1721, 2404
BstNI	CCWGG	6 cut(s)	242, 543, 1317, 1970, 2000, 2094
BstNSI	RCATGY	4 cut(s)	1023, 2157, 2163, 2299
BstSCI	CCNGG	7 cut(s)	240, 541, 1225, 1315, 1968, 1998, 2092
BstSFI	CTRYAG	3 cut(s)	914, 1499, 1668
BstSLI	GKGCMC	2 cut(s)	1540, 2572
BstUI	CGCG	1 cut(s)	2083
BstV1I	GCAGC	7 cut(s)	900, 1513, 2002, 2336, 2358, 2625, 2642
BstV2I	GAAGAC	2 cut(s)	65, 744
BstX2I	RGATCY	2 cut(s)	1495, 1721
BstYI	RGATCY	2 cut(s)	1495, 1721
BsuI	GTATCC	1 cut(s)	1441
BtgZI	GCGATG	1 cut(s)	2072
BtrI	CACGTC	2 cut(s)	1830, 2374
BtsCI	GGATG	7 cut(s)	42, 215, 304, 1146, 1999, 2077, 2621
BtsIMutI	CAGTG	3 cut(s)	202, 953, 985
BveI	ACCTGC	3 cut(s)	856, 977, 2428
Cac8I	GCNNGC	2 cut(s)	2141, 2537
CciI	TCATGA	1 cut(s)	1678
CfoI	GCGC	3 cut(s)	2085, 2190, 2393
Cfr10I	RCCGGY	1 cut(s)	2546
Cfr13I	GGNCC	5 cut(s)	539, 677, 1536, 1537, 1550
CseI	GACGC	1 cut(s)	2480
Csp6I	GTAC	1 cut(s)	1392
CviQI	GTAC	1 cut(s)	1392
DdeI	CTNAG	9 cut(s)	220, 369, 465, 648, 1026, 1598, 1643, 1743, 1913
DpnI	GATC	8 cut(s)	79, 351, 577, 738, 1497, 1677, 1723, 2406
DpnII	GATC	8 cut(s)	77, 349, 575, 736, 1495, 1675, 1721, 2404
DraI	TTTAAA	2 cut(s)	312, 1932
DriI	GACNNNNNGTC	1 cut(s)	1212
EaeI	YGGCCR	3 cut(s)	39, 890, 1121
Eam1104I	CTCTTC	6 cut(s)	727, 860, 1526, 1683, 1712, 2351
Eam1105I	GACNNNNNGTC	1 cut(s)	1212
EarI	CTCTTC	6 cut(s)	727, 860, 1526, 1683, 1712, 2351
EciI	GGCGGA	1 cut(s)	1804
Eco130I	CCWWGG	2 cut(s)	524, 893
Eco147I	AGGCCT	1 cut(s)	1062
Eco24I	GRGCYC	4 cut(s)	1540, 1704, 1765, 2421
Eco31I	GGTCTC	1 cut(s)	799
Eco57I	CTGAAG	1 cut(s)	873
Eco72I	CACGTG	1 cut(s)	289
EcoNI	CCTNNNNNAGG	1 cut(s)	852
EcoO109I	RGGNCCY	1 cut(s)	1536
EcoRI	GAATTC	5 cut(s)	127, 937, 1519, 1682, 2361
EcoRII	CCWGG	6 cut(s)	240, 541, 1315, 1968, 1998, 2092
EcoT14I	CCWWGG	2 cut(s)	524, 893
EcoT22I	ATGCAT	2 cut(s)	215, 2174
EcoT38I	GRGCYC	4 cut(s)	1540, 1704, 1765, 2421
ErhI	CCWWGG	2 cut(s)	524, 893
Esp3I	CGTCTC	1 cut(s)	462
FalI	AAGNNNNNCTT	2 cut(s)	2601, 2633
FaqI	GGGAC	2 cut(s)	188, 2654
FauI	CCCGC	1 cut(s)	2123
FauNDI	CATATG	1 cut(s)	2319
FbaI	TGATCA	1 cut(s)	349
Fnu4HI	GCNGC	8 cut(s)	914, 1502, 2016, 2347, 2350, 2614, 2631, 2634
FokI	GGATG	7 cut(s)	49, 222, 311, 1153, 2006, 2064, 2608
FriOI	GRGCYC	4 cut(s)	1540, 1704, 1765, 2421
Fsp4HI	GCNGC	8 cut(s)	914, 1502, 2016, 2347, 2350, 2614, 2631, 2634
FspBI	CTAG	6 cut(s)	552, 561, 1335, 1374, 2004, 2010
GlaI	GCGC	3 cut(s)	2084, 2189, 2392
GluI	GCNGC	8 cut(s)	914, 1502, 2016, 2347, 2350, 2614, 2631, 2634
GsuI	CTGGAG	2 cut(s)	948, 1613
HaeII	RGCGCY	1 cut(s)	2191
HapII	CCGG	3 cut(s)	81, 1227, 2547
HgaI	GACGC	1 cut(s)	2480
HhaI	GCGC	3 cut(s)	2085, 2190, 2393
Hin1I	GRCGYC	1 cut(s)	2472
Hin6I	GCGC	3 cut(s)	2083, 2188, 2391
HinP1I	GCGC	3 cut(s)	2083, 2188, 2391
HincII	GTYRAC	2 cut(s)	1804, 2301
HindII	GTYRAC	2 cut(s)	1804, 2301
HpaII	CCGG	3 cut(s)	81, 1227, 2547
HphI	GGTGA	7 cut(s)	314, 344, 359, 485, 1208, 1897, 2669
Hpy166II	GTNNAC	7 cut(s)	136, 1637, 1804, 1827, 1954, 2301, 2570
Hpy188III	TCNNGA	8 cut(s)	296, 961, 1079, 1263, 1422, 1592, 1679, 2445
Hpy8I	GTNNAC	7 cut(s)	136, 1637, 1804, 1827, 1954, 2301, 2570
HpyCH4III	ACNGT	6 cut(s)	206, 364, 957, 1176, 1204, 2179
HpyCH4IV	ACGT	8 cut(s)	288, 1103, 1806, 1829, 2166, 2233, 2373, 2566
HpyF3I	CTNAG	9 cut(s)	220, 369, 465, 648, 1026, 1598, 1643, 1743, 1913
HpySE526I	ACGT	8 cut(s)	288, 1103, 1806, 1829, 2166, 2233, 2373, 2566
Hsp92I	GRCGYC	1 cut(s)	2472
HspAI	GCGC	3 cut(s)	2083, 2188, 2391
Ksp22I	TGATCA	1 cut(s)	349
Kzo9I	GATC	8 cut(s)	77, 349, 575, 736, 1495, 1675, 1721, 2404
LmnI	GCTCC	3 cut(s)	377, 1594, 2063
Lsp1109I	GCAGC	7 cut(s)	900, 1513, 2002, 2336, 2358, 2625, 2642
LweI	GCATC	4 cut(s)	200, 973, 1268, 1984
MaeI	CTAG	6 cut(s)	552, 561, 1335, 1374, 2004, 2010
MaeII	ACGT	8 cut(s)	288, 1103, 1806, 1829, 2166, 2233, 2373, 2566
MaeIII	GTNAC	8 cut(s)	514, 873, 1159, 1204, 1354, 1367, 1478, 1663
MalI	GATC	8 cut(s)	79, 351, 577, 738, 1497, 1677, 1723, 2406
MboI	GATC	8 cut(s)	77, 349, 575, 736, 1495, 1675, 1721, 2404
MfeI	CAATTG	1 cut(s)	416
MflI	RGATCY	2 cut(s)	1495, 1721
MhlI	GDGCHC	6 cut(s)	1540, 1704, 1765, 1865, 2421, 2572
MlsI	TGGCCA	3 cut(s)	41, 892, 1123
MluNI	TGGCCA	3 cut(s)	41, 892, 1123
MlyI	GAGTC	2 cut(s)	14, 877
MmeI	TCCRAC	5 cut(s)	149, 471, 787, 1196, 2041
Mox20I	TGGCCA	3 cut(s)	41, 892, 1123
Mph1103I	ATGCAT	2 cut(s)	215, 2174
MroXI	GAANNNNTTC	2 cut(s)	1062, 1587
MscI	TGGCCA	3 cut(s)	41, 892, 1123
MseI	TTAA	4 cut(s)	311, 383, 581, 1931
MslI	CAYNNNNRTG	4 cut(s)	1264, 1464, 2158, 2430
Msp20I	TGGCCA	3 cut(s)	41, 892, 1123
MspA1I	CMGCKG	2 cut(s)	2349, 2633
MspI	CCGG	3 cut(s)	81, 1227, 2547
MspR9I	CCNGG	7 cut(s)	242, 543, 1227, 1317, 1970, 2000, 2094
MunI	CAATTG	1 cut(s)	416
Mva1269I	GAATGC	1 cut(s)	2251
MvaI	CCWGG	6 cut(s)	242, 543, 1317, 1970, 2000, 2094
MvnI	CGCG	1 cut(s)	2083
NciI	CCSGG	1 cut(s)	1227
NdeI	CATATG	1 cut(s)	2319
NdeII	GATC	8 cut(s)	77, 349, 575, 736, 1495, 1675, 1721, 2404
NlaIV	GGNNCC	2 cut(s)	1538, 2065
NmuCI	GTSAC	4 cut(s)	1204, 1367, 1478, 1663
NsiI	ATGCAT	2 cut(s)	215, 2174
NspI	RCATGY	4 cut(s)	1023, 2157, 2163, 2299
NspV	TTCGAA	1 cut(s)	1686
PagI	TCATGA	1 cut(s)	1678
PaqCI	CACCTGC	1 cut(s)	856
PceI	AGGCCT	1 cut(s)	1062
PcsI	WCGNNNNNNNCGW	1 cut(s)	997
PctI	GAATGC	1 cut(s)	2251
PdmI	GAANNNNTTC	2 cut(s)	1062, 1587
PflMI	CCANNNNNTGG	4 cut(s)	430, 572, 602, 1712
PkrI	GCNGC	8 cut(s)	915, 1503, 2017, 2348, 2351, 2615, 2632, 2635
PleI	GAGTC	2 cut(s)	13, 876
PmaCI	CACGTG	1 cut(s)	289
PmlI	CACGTG	1 cut(s)	289
PpsI	GAGTC	2 cut(s)	13, 876
Ppu21I	YACGTR	2 cut(s)	289, 2567
Psp6I	CCWGG	6 cut(s)	240, 541, 1315, 1968, 1998, 2092
PspCI	CACGTG	1 cut(s)	289
PspGI	CCWGG	6 cut(s)	240, 541, 1315, 1968, 1998, 2092
PspN4I	GGNNCC	2 cut(s)	1538, 2065
PspOMI	GGGCCC	1 cut(s)	1536
PspPI	GGNCC	5 cut(s)	539, 677, 1536, 1537, 1550
PstI	CTGCAG	2 cut(s)	918, 1503
PsuI	RGATCY	2 cut(s)	1495, 1721
PvuII	CAGCTG	1 cut(s)	2349
RsaI	GTAC	1 cut(s)	1393
RsaNI	GTAC	1 cut(s)	1392
RseI	CAYNNNNRTG	4 cut(s)	1264, 1464, 2158, 2430
SaqAI	TTAA	4 cut(s)	311, 383, 581, 1931
SatI	GCNGC	8 cut(s)	914, 1502, 2016, 2347, 2350, 2614, 2631, 2634
Sau3AI	GATC	8 cut(s)	77, 349, 575, 736, 1495, 1675, 1721, 2404
Sau96I	GGNCC	5 cut(s)	539, 677, 1536, 1537, 1550
SchI	GAGTC	2 cut(s)	14, 877
ScrFI	CCNGG	7 cut(s)	242, 543, 1227, 1317, 1970, 2000, 2094
SduI	GDGCHC	6 cut(s)	1540, 1704, 1765, 1865, 2421, 2572
SfaNI	GCATC	4 cut(s)	200, 973, 1268, 1984
SfcI	CTRYAG	3 cut(s)	914, 1499, 1668
SfuI	TTCGAA	1 cut(s)	1686
SmiMI	CAYNNNNRTG	4 cut(s)	1264, 1464, 2158, 2430
SmlI	CTYRAG	1 cut(s)	802
SmoI	CTYRAG	1 cut(s)	802
SseBI	AGGCCT	1 cut(s)	1062
SsiI	CCGC	6 cut(s)	111, 1789, 2081, 2130, 2582, 2633
SspI	AATATT	1 cut(s)	1546
SspMI	CTAG	6 cut(s)	552, 561, 1335, 1374, 2004, 2010
StuI	AGGCCT	1 cut(s)	1062
StyD4I	CCNGG	7 cut(s)	240, 541, 1225, 1315, 1968, 1998, 2092
StyI	CCWWGG	2 cut(s)	524, 893
TaaI	ACNGT	6 cut(s)	206, 364, 957, 1176, 1204, 2179
TaiI	ACGT	8 cut(s)	291, 1106, 1809, 1832, 2169, 2236, 2376, 2569
TaqI	TCGA	5 cut(s)	883, 960, 991, 1517, 1686
TatI	WGTACW	1 cut(s)	1391
TauI	GCSGC	1 cut(s)	2636
Tru1I	TTAA	4 cut(s)	311, 383, 581, 1931
Tru9I	TTAA	4 cut(s)	311, 383, 581, 1931
TscAI	CASTG	3 cut(s)	209, 960, 985
TseFI	GTSAC	4 cut(s)	1204, 1367, 1478, 1663
TseI	GCWGC	7 cut(s)	913, 1501, 2015, 2346, 2349, 2613, 2630
Tsp45I	GTSAC	4 cut(s)	1204, 1367, 1478, 1663
TspGWI	ACGGA	1 cut(s)	2614
TspRI	CASTG	3 cut(s)	209, 960, 985
Van91I	CCANNNNNTGG	4 cut(s)	430, 572, 602, 1712
VneI	GTGCAC	1 cut(s)	2568
XagI	CCTNNNNNAGG	1 cut(s)	852
XapI	RAATTY	8 cut(s)	127, 720, 777, 937, 1519, 1682, 1840, 2361
XceI	RCATGY	4 cut(s)	1023, 2157, 2163, 2299
XmnI	GAANNNNTTC	2 cut(s)	1062, 1587
XspI	CTAG	6 cut(s)	552, 561, 1335, 1374, 2004, 2010
Zsp2I	ATGCAT	2 cut(s)	215, 2174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.