Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0006399

Physical Location & Seq

Genomic Coordinates Forward (+)

3371668 .. 3377042

Gene Structure 5375 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g04330.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2676 bp

ATGGAGTCCAAGATTTGCATGAATCCTTCGTGTAGGATGGCCAATACGCACGAATGGAAGAAAGGTTGGCCTTTGCGAACCGGTGGATTTGCCCATCTCTGCTACAAGTGCGGAGTTGAGTATGAGAATTCAGTTTACTGCAATACATTCCATTCTGGGGAAACTGGTTGGAGGGACTGCAATTTGTGCCACAAGCCTCTCCACTGTGGATGCATAGTCTCAGAGATATTGTATGAGTGCCTGGATTTTGGAGGTATAGGGTGCATTGGCTGTGCTTCTCAACCTCGCATGATTCAGGACGGTGATGTTTTAAATGGATTTGGTGGATTGAAAATAAGTGATTCCGGTGATCAGCAATCAACTGTTCCTCAGAATGGAGCATTAAGTGATACTGCTAATGAGGGAAAACTTTTGCAATTGTGTCAAGTCATGGAGGCTAATGAATCCAACCTTTCATCTCAATCTCAGAGAGGTGAAATAATTGTATCTCCTGTGCAAACCAAACGTGAAGAAGTTACTTATCCAAGGGGGGAAGTTGGCCCTGGATTTTCAAGTATCAGCAGGCCATCTTTTGGATCATTAACATTTGCCAAACCAGACAATGGTAGAATAATGATAGAGGTCAAAGATATGAATAAGCCATCCTCTGACCCGTCTTTGAGTATGACTTTGGGAGGCCCATCTGCAACTCCAAACTTTGCTCAACCCTTTACTGGGGGAATTTTGGAGAGAAGAGATCAGATTAAGACGCCTTCTTCCTTCCAACAGGGGCAAAAAATTCAGCCTATTTTTCCCAGACCCTTGAGACCTCCCCCTCCTGTTCATCATGTGCGTGTTGCAAGGCCACCGGCTGAAGGGCGAGGGAAGAGTCAGTTACTTCCTCGATACTGGCCAAGGATTACTGACCAAGAGCTGCAGAAATTAGCTGGAGATTTGAATTCTACTATTGTGCCACTGTTCGAGAAGGTACTGAGTGCCAGCGATGCAGGTCGAATTGGTCGTCTGGTTCTCCCAAAAGCATGTGCTGAGGCATACTTTCCTCCTATTTCTCAATCAGAAGGCCTTCCTATAAGGATTCAAGATGTCAAGGGTAATGAATGGACGTTTCAGTTCAGATTTTGGCCAAATAATAATAGCAGGATGTATGTTTTAGAAGGAGTAACGCCTTGCATACAGTCTATGCAACTTCAAGCTGGTGATACTGTGACATTCAGTCGGATAGATCCCGGAGGCAGACTTGTAATTGGGTTTCGTAAGGCATCAAGGTGTTTAGATGTGCAGGAATCCCAAACATCTTTCCTTCCCAATGGAACTCCTGGGGAAACTTCCTGTCCTAGCGTTGTTGAGAATCTGGTAACAGGAAGTGGTCACTCTAGTATTTATCAAACGAGTACAGGAAGCAAAGACCCTTACCTAAATGCTCTATCAGGACATTTGCATTTGGCTGATGGGGATACAAGTTTGCATGATAATGAGAACCATAGTCACTTTACAAGTGAGGATCTGCAGCAGAAGCCTGTGTCGAATTCTGACAAGAAGAGGGCCCGAAATATTGGGCCTAAAAGTAAGAGGTTGCTCTTGCATAGTGAAGATGTTCTGGAGCTGAGACTGACATGGGAAGAAGCACAGGACTTGCTTCGTCCACCCCCGAGTGTCAAACCAAGCATTGTCACTATAGAATCTGGCAATGTTCATTTTTTCCAGGAGCCCCCAGTTTTTGGGAAGAGATCTCTATTCATCGCCGAATCTGAGAGACAGGAACAATGGGCTCAGTGTGATGATTGCTCTAAGTGGCGGAGGTTGCCTGTTGACGTTCTTCTTCCTCCAAAGTGGACGTGCTCTGAAAATTCTTGGGATATAAACAGGTGCTCATGTTCTGCACCAGAGGAGATGAGCCAAAAGGAATTGGATAATCTTCTAAGACCAAGCAAAGATTTAAAGAAGCGAAGAATCGTAGTGAACCATAATGAAGCCCAGGAACACGAACCTTCTGGCTTGGATGCCCTGGCTAGTGCCAGTGCTGCCATTCTGGGAGATAGTGTGGATTACGCTGATGAACAATCAGTTGGAGCCACAACCAGACATCCGCGTCATCGCCCAGGTTGCACATGCATAGTATGTATTCAACCCCCAAGCGGGAAGGGCAAGCACAAGCCAACATGCACATGCAACGTGTGCATGACAGTAAAACGGCGCTTCAAAACCCTGATGATGAACAAGAGGAAACGCAAATCAGAACGTGAAATGGAGAATGCCCACAGGGATAATAATGACCACAAGGATGAATCAGAAATGAATGGTACGTCAACAGAGATTGAGTTGCATATGAATCACTTATCGGAGAATGGAAGCAGCTGCGAGAAGAGAATTCAAGCTGACGTGGCAGAAAGTTCATGCGCTGGACAAATTGATCTGAATTGTGAGCCCAAACACAATTATGTGCAGGTTTCAGGATTGAACTTGTTGAGACTCGCTGATGCTGTTGCTCAACAACCAGTAAAGAACAGCACAAAGGAAAGTGGCCTTGCAAACAGAATGTGCGAGCCACAGGCCGGTCTTGGTTCATCTTTACGTACACAAGATCCTGCGGAGACTGATAAACTCTTGTGTAATGAAGGCAGCCTTTCATCCGTGGCAGCGGCGTGGGACTTGGAGGGTAGAGGTGATGGGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B3 zf-CW

Protein Analysis

892

Amino Acids

98.34

Weight (kDa)

6.44

Isoelectric Point (pI)

51.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006399)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520
malus_domestica	MD03G1051600.v1.1 MD11G1053500.v1.1 MD11G1053700.v1.1
prunus_persica	Prupe.6G041000_v2.0.a1 Prupe.6G041000_v2.0.a1 Prupe.6G041000_v2.0.a1
pyrus_communis	pycom03g04100 pycom11g04330
rosa_chinensis	RchiOBHm_Chr5g0073201
rosa_laevigata	RLG00000036373
rosa_multiflora	Rmu_sc0001887.1_g000012
rosa_roxburghii	Rroxscaffold_1G00007990
rosa_rugosa	Rorug05G0422000 Rorug05G0422100
rosa_samantha	Rh5AG478900 Rh5BG499600 Rh5CG522800 Rh5DG511700
rosa_wichuraiana	Rw5G044520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2088
Acc36I	ACCTGC	2 cut(s)	977, 2434
AccB7I	CCANNNNNTGG	3 cut(s)	572, 602, 1718
AccII	CGCG	1 cut(s)	2089
AciI	CCGC	6 cut(s)	111, 1795, 2087, 2136, 2588, 2639
AclWI	GGATC	4 cut(s)	583, 1217, 1509, 2576
AcoI	YGGCCR	3 cut(s)	39, 890, 1121
AcsI	RAATTY	7 cut(s)	127, 720, 777, 937, 1525, 1846, 2367
AcuI	CTGAAG	1 cut(s)	873
AcyI	GRCGYC	1 cut(s)	749
AfaI	GTAC	4 cut(s)	969, 1393, 2302, 2575
AflIII	ACRYGT	1 cut(s)	2172
AgeI	ACCGGT	1 cut(s)	80
AgsI	TTSAA	9 cut(s)	331, 552, 937, 1079, 1190, 2126, 2200, 2372, 2458
AhdI	GACNNNNNGTC	1 cut(s)	1212
AjiI	CACGTC	2 cut(s)	1836, 2380
AjnI	CCWGG	7 cut(s)	240, 541, 1315, 1701, 1974, 2004, 2098
AjuI	GAANNNNNNNTTGG	2 cut(s)	2049, 2081
AluBI	AGCT	6 cut(s)	913, 926, 1193, 1603, 2355, 2375
AluI	AGCT	6 cut(s)	913, 926, 1193, 1603, 2355, 2375
Alw21I	GWGCWC	2 cut(s)	1841, 1871
Alw26I	GTCTC	6 cut(s)	223, 799, 1600, 1747, 2461, 2585
AlwI	GGATC	4 cut(s)	583, 1217, 1509, 2576
Ama87I	CYCGRG	1 cut(s)	1648
ApaI	GGGCCC	1 cut(s)	1546
ApeKI	GCWGC	7 cut(s)	913, 1507, 2021, 2352, 2355, 2619, 2636
ApoI	RAATTY	7 cut(s)	127, 720, 777, 937, 1525, 1846, 2367
ArsI	GACNNNNNNTTYG	2 cut(s)	985, 1017
AsiGI	ACCGGT	1 cut(s)	80
Asp700I	GAANNNNTTC	2 cut(s)	1062, 1593
AspLEI	GCGC	2 cut(s)	2196, 2399
AspS9I	GGNCC	5 cut(s)	539, 677, 1542, 1543, 1556
AsuC2I	CCSGG	1 cut(s)	1227
AsuHPI	GGTGA	5 cut(s)	314, 359, 485, 1208, 2675
AvaI	CYCGRG	1 cut(s)	1648
BaeGI	GKGCMC	1 cut(s)	1546
BalI	TGGCCA	3 cut(s)	41, 892, 1123
BanII	GRGCYC	4 cut(s)	1546, 1710, 1771, 2427
Bbv12I	GWGCWC	2 cut(s)	1841, 1871
BbvCI	CCTCAGC	1 cut(s)	1026
BbvI	GCAGC	7 cut(s)	900, 1519, 2008, 2342, 2364, 2631, 2648
BccI	CCATC	7 cut(s)	31, 102, 574, 649, 688, 1442, 2660
BceAI	ACGGC	1 cut(s)	2207
BciT130I	CCWGG	7 cut(s)	242, 543, 1317, 1703, 1976, 2006, 2100
BciVI	GTATCC	1 cut(s)	1447
BclI	TGATCA	1 cut(s)	349
BcnI	CCSGG	1 cut(s)	1227
BcoDI	GTCTC	6 cut(s)	223, 799, 1600, 1747, 2461, 2585
BfaI	CTAG	3 cut(s)	1335, 1374, 2010
BfmI	CTRYAG	3 cut(s)	914, 1505, 1674
BfoI	RGCGCY	1 cut(s)	2197
BfuAI	ACCTGC	2 cut(s)	977, 2434
BfuI	GTATCC	1 cut(s)	1447
BglII	AGATCT	1 cut(s)	1727
BisI	GCNGC	8 cut(s)	914, 1508, 2022, 2353, 2356, 2620, 2637, 2640
BlsI	GCNGC	8 cut(s)	915, 1509, 2023, 2354, 2357, 2621, 2638, 2641
Bme1390I	CCNGG	8 cut(s)	242, 543, 1227, 1317, 1703, 1976, 2006, 2100
BmeRI	GACNNNNNGTC	1 cut(s)	1212
BmeT110I	CYCGRG	1 cut(s)	1648
BmgBI	CACGTC	2 cut(s)	1836, 2380
BmgT120I	GGNCC	5 cut(s)	539, 677, 1542, 1543, 1556
BmiI	GGNNCC	3 cut(s)	1544, 1707, 2071
BmrFI	CCNGG	8 cut(s)	242, 543, 1227, 1317, 1703, 1976, 2006, 2100
BmrI	ACTGGG	2 cut(s)	723, 1706
BmsI	GCATC	5 cut(s)	200, 973, 1268, 1990, 2467
BmuI	ACTGGG	2 cut(s)	723, 1706
BpmI	CTGGAG	2 cut(s)	948, 1619
Bpu10I	CCTNAGC	1 cut(s)	1026
BpuEI	CTTGAG	1 cut(s)	823
BpuMI	CCSGG	1 cut(s)	1227
BsaAI	YACGTR	1 cut(s)	2573
BsaHI	GRCGYC	1 cut(s)	749
BsaI	GGTCTC	1 cut(s)	799
BsaJI	CCNNGG	8 cut(s)	524, 541, 893, 1316, 1974, 2004, 2098, 2631
BsaWI	WCCGGW	2 cut(s)	80, 344
BsaXI	ACNNNNNCTCC	2 cut(s)	2025, 2055
Bse118I	RCCGGY	3 cut(s)	80, 847, 2552
Bse1I	ACTGG	6 cut(s)	169, 718, 893, 1712, 2016, 2495
Bse3DI	GCAATG	1 cut(s)	1693
BseBI	CCWGG	7 cut(s)	242, 543, 1317, 1703, 1976, 2006, 2100
BseDI	CCNNGG	8 cut(s)	524, 541, 893, 1316, 1974, 2004, 2098, 2631
BseGI	GGATG	8 cut(s)	42, 215, 641, 1146, 2005, 2083, 2287, 2627
BseMI	GCAATG	1 cut(s)	1693
BseMII	CTCAG	8 cut(s)	234, 383, 479, 962, 1017, 1595, 1740, 1784
BseNI	ACTGG	6 cut(s)	169, 718, 893, 1712, 2016, 2495
BseRI	GAGGAG	1 cut(s)	1901
BseSI	GKGCMC	1 cut(s)	1546
BseXI	GCAGC	7 cut(s)	900, 1519, 2008, 2342, 2364, 2631, 2648
BsgI	GTGCAG	3 cut(s)	1298, 1863, 2462
Bsh1236I	CGCG	1 cut(s)	2089
BshTI	ACCGGT	1 cut(s)	80
BsiHKAI	GWGCWC	2 cut(s)	1841, 1871
BsiHKCI	CYCGRG	1 cut(s)	1648
BsiSI	CCGG	5 cut(s)	81, 345, 848, 1227, 2553
BslFI	GGGAC	2 cut(s)	188, 2660
BsmAI	GTCTC	6 cut(s)	223, 799, 1600, 1747, 2461, 2585
BsmFI	GGGAC	2 cut(s)	188, 2660
BsmI	GAATGC	1 cut(s)	2257
Bso31I	GGTCTC	1 cut(s)	799
BsoBI	CYCGRG	1 cut(s)	1648
Bsp120I	GGGCCC	1 cut(s)	1542
Bsp1286I	GDGCHC	6 cut(s)	1546, 1710, 1771, 1841, 1871, 2427
Bsp143I	GATC	8 cut(s)	349, 575, 736, 1222, 1501, 1727, 2410, 2581
BspACI	CCGC	6 cut(s)	111, 1795, 2087, 2136, 2588, 2639
BspCNI	CTCAG	8 cut(s)	233, 382, 478, 963, 1018, 1596, 1741, 1783
BspFNI	CGCG	1 cut(s)	2089
BspLI	GGNNCC	3 cut(s)	1544, 1707, 2071
BspMAI	CTGCAG	2 cut(s)	918, 1509
BspMI	ACCTGC	2 cut(s)	977, 2434
BspPI	GGATC	4 cut(s)	583, 1217, 1509, 2576
BspTNI	GGTCTC	1 cut(s)	799
BsrDI	GCAATG	1 cut(s)	1693
BsrFI	RCCGGY	3 cut(s)	80, 847, 2552
BsrI	ACTGG	6 cut(s)	169, 718, 893, 1712, 2016, 2495
BssAI	RCCGGY	3 cut(s)	80, 847, 2552
BssECI	CCNNGG	8 cut(s)	524, 541, 893, 1316, 1974, 2004, 2098, 2631
BssMI	GATC	8 cut(s)	349, 575, 736, 1222, 1501, 1727, 2410, 2581
BssNI	GRCGYC	1 cut(s)	749
BssT1I	CCWWGG	2 cut(s)	524, 893
Bst2UI	CCWGG	7 cut(s)	242, 543, 1317, 1703, 1976, 2006, 2100
Bst4CI	ACNGT	7 cut(s)	206, 302, 364, 957, 1176, 1204, 2185
Bst6I	CTCTTC	5 cut(s)	727, 860, 1532, 1718, 2357
BstACI	GRCGYC	1 cut(s)	749
BstAPI	GCANNNNNTGC	2 cut(s)	186, 2175
BstBAI	YACGTR	1 cut(s)	2573
BstC8I	GCNNGC	4 cut(s)	563, 979, 2147, 2543
BstDSI	CCRYGG	1 cut(s)	2631
BstF5I	GGATG	8 cut(s)	42, 215, 641, 1146, 2005, 2083, 2287, 2627
BstFNI	CGCG	1 cut(s)	2089
BstH2I	RGCGCY	1 cut(s)	2197
BstHHI	GCGC	2 cut(s)	2196, 2399
BstKTI	GATC	8 cut(s)	352, 578, 739, 1225, 1504, 1730, 2413, 2584
BstMAI	GTCTC	6 cut(s)	223, 799, 1600, 1747, 2461, 2585
BstMBI	GATC	8 cut(s)	349, 575, 736, 1222, 1501, 1727, 2410, 2581
BstNI	CCWGG	7 cut(s)	242, 543, 1317, 1703, 1976, 2006, 2100
BstNSI	RCATGY	4 cut(s)	1023, 2112, 2163, 2169
BstSCI	CCNGG	8 cut(s)	240, 541, 1225, 1315, 1701, 1974, 2004, 2098
BstSFI	CTRYAG	3 cut(s)	914, 1505, 1674
BstSLI	GKGCMC	1 cut(s)	1546
BstSNI	TACGTA	1 cut(s)	2573
BstUI	CGCG	1 cut(s)	2089
BstV1I	GCAGC	7 cut(s)	900, 1519, 2008, 2342, 2364, 2631, 2648
BstX2I	RGATCY	4 cut(s)	1222, 1501, 1727, 2581
BstYI	RGATCY	4 cut(s)	1222, 1501, 1727, 2581
BsuI	GTATCC	1 cut(s)	1447
BtgI	CCRYGG	1 cut(s)	2631
BtgZI	GCGATG	3 cut(s)	996, 1723, 2078
BtrI	CACGTC	2 cut(s)	1836, 2380
BtsCI	GGATG	8 cut(s)	42, 215, 641, 1146, 2005, 2083, 2287, 2627
BtsIMutI	CAGTG	4 cut(s)	202, 953, 1778, 2023
BveI	ACCTGC	2 cut(s)	977, 2434
Cac8I	GCNNGC	4 cut(s)	563, 979, 2147, 2543
CfoI	GCGC	2 cut(s)	2196, 2399
Cfr10I	RCCGGY	3 cut(s)	80, 847, 2552
Cfr13I	GGNCC	5 cut(s)	539, 677, 1542, 1543, 1556
CseI	GACGC	2 cut(s)	757, 2078
Csp6I	GTAC	4 cut(s)	968, 1392, 2301, 2574
CspAI	ACCGGT	1 cut(s)	80
CviQI	GTAC	4 cut(s)	968, 1392, 2301, 2574
DpnI	GATC	8 cut(s)	351, 577, 738, 1224, 1503, 1729, 2412, 2583
DpnII	GATC	8 cut(s)	349, 575, 736, 1222, 1501, 1727, 2410, 2581
DraI	TTTAAA	2 cut(s)	312, 1938
DrdI	GACNNNNNNGTC	1 cut(s)	2088
DriI	GACNNNNNGTC	1 cut(s)	1212
DseDI	GACNNNNNNGTC	1 cut(s)	2088
EaeI	YGGCCR	3 cut(s)	39, 890, 1121
Eam1104I	CTCTTC	5 cut(s)	727, 860, 1532, 1718, 2357
Eam1105I	GACNNNNNGTC	1 cut(s)	1212
EarI	CTCTTC	5 cut(s)	727, 860, 1532, 1718, 2357
EciI	GGCGGA	1 cut(s)	1810
Eco105I	TACGTA	1 cut(s)	2573
Eco130I	CCWWGG	2 cut(s)	524, 893
Eco147I	AGGCCT	1 cut(s)	1062
Eco24I	GRGCYC	4 cut(s)	1546, 1710, 1771, 2427
Eco31I	GGTCTC	1 cut(s)	799
Eco57I	CTGAAG	1 cut(s)	873
Eco88I	CYCGRG	1 cut(s)	1648
EcoO109I	RGGNCCY	1 cut(s)	1542
EcoRI	GAATTC	4 cut(s)	127, 937, 1525, 2367
EcoRII	CCWGG	7 cut(s)	240, 541, 1315, 1701, 1974, 2004, 2098
EcoT14I	CCWWGG	2 cut(s)	524, 893
EcoT22I	ATGCAT	2 cut(s)	215, 2114
EcoT38I	GRGCYC	4 cut(s)	1546, 1710, 1771, 2427
ErhI	CCWWGG	2 cut(s)	524, 893
FalI	AAGNNNNNCTT	2 cut(s)	2607, 2639
FaqI	GGGAC	2 cut(s)	188, 2660
FauI	CCCGC	1 cut(s)	2129
FauNDI	CATATG	1 cut(s)	2325
FbaI	TGATCA	1 cut(s)	349
Fnu4HI	GCNGC	8 cut(s)	914, 1508, 2022, 2353, 2356, 2620, 2637, 2640
FokI	GGATG	8 cut(s)	49, 222, 628, 1153, 2012, 2070, 2294, 2614
FriOI	GRGCYC	4 cut(s)	1546, 1710, 1771, 2427
Fsp4HI	GCNGC	8 cut(s)	914, 1508, 2022, 2353, 2356, 2620, 2637, 2640
FspBI	CTAG	3 cut(s)	1335, 1374, 2010
GlaI	GCGC	2 cut(s)	2195, 2398
GluI	GCNGC	8 cut(s)	914, 1508, 2022, 2353, 2356, 2620, 2637, 2640
GsuI	CTGGAG	2 cut(s)	948, 1619
HaeII	RGCGCY	1 cut(s)	2197
HapII	CCGG	5 cut(s)	81, 345, 848, 1227, 2553
HgaI	GACGC	2 cut(s)	757, 2078
HhaI	GCGC	2 cut(s)	2196, 2399
Hin1I	GRCGYC	1 cut(s)	749
Hin6I	GCGC	2 cut(s)	2194, 2397
HinP1I	GCGC	2 cut(s)	2194, 2397
HincII	GTYRAC	2 cut(s)	1810, 2307
HindII	GTYRAC	2 cut(s)	1810, 2307
HpaII	CCGG	5 cut(s)	81, 345, 848, 1227, 2553
HphI	GGTGA	5 cut(s)	314, 359, 485, 1208, 2675
Hpy166II	GTNNAC	7 cut(s)	136, 1643, 1810, 1833, 1960, 2307, 2576
Hpy188III	TCNNGA	6 cut(s)	296, 961, 1079, 1428, 1598, 2451
Hpy8I	GTNNAC	7 cut(s)	136, 1643, 1810, 1833, 1960, 2307, 2576
HpyCH4III	ACNGT	7 cut(s)	206, 302, 364, 957, 1176, 1204, 2185
HpyCH4IV	ACGT	9 cut(s)	505, 1103, 1812, 1835, 2172, 2239, 2303, 2379, 2572
HpySE526I	ACGT	9 cut(s)	505, 1103, 1812, 1835, 2172, 2239, 2303, 2379, 2572
Hsp92I	GRCGYC	1 cut(s)	749
HspAI	GCGC	2 cut(s)	2194, 2397
Ksp22I	TGATCA	1 cut(s)	349
Kzo9I	GATC	8 cut(s)	349, 575, 736, 1222, 1501, 1727, 2410, 2581
LmnI	GCTCC	4 cut(s)	377, 1600, 1705, 2069
Lsp1109I	GCAGC	7 cut(s)	900, 1519, 2008, 2342, 2364, 2631, 2648
LweI	GCATC	5 cut(s)	200, 973, 1268, 1990, 2467
MaeI	CTAG	3 cut(s)	1335, 1374, 2010
MaeII	ACGT	9 cut(s)	505, 1103, 1812, 1835, 2172, 2239, 2303, 2379, 2572
MaeIII	GTNAC	8 cut(s)	514, 873, 1159, 1204, 1354, 1367, 1484, 1669
MalI	GATC	8 cut(s)	351, 577, 738, 1224, 1503, 1729, 2412, 2583
MboI	GATC	8 cut(s)	349, 575, 736, 1222, 1501, 1727, 2410, 2581
MfeI	CAATTG	1 cut(s)	416
MflI	RGATCY	4 cut(s)	1222, 1501, 1727, 2581
MhlI	GDGCHC	6 cut(s)	1546, 1710, 1771, 1841, 1871, 2427
MlsI	TGGCCA	3 cut(s)	41, 892, 1123
MluNI	TGGCCA	3 cut(s)	41, 892, 1123
MlyI	GAGTC	3 cut(s)	14, 877, 2463
MmeI	TCCRAC	5 cut(s)	149, 471, 787, 1196, 2047
Mox20I	TGGCCA	3 cut(s)	41, 892, 1123
Mph1103I	ATGCAT	2 cut(s)	215, 2114
MroXI	GAANNNNTTC	2 cut(s)	1062, 1593
MscI	TGGCCA	3 cut(s)	41, 892, 1123
MseI	TTAA	5 cut(s)	311, 383, 581, 744, 1937
MslI	CAYNNNNRTG	6 cut(s)	831, 1264, 1470, 2164, 2280, 2436
Msp20I	TGGCCA	3 cut(s)	41, 892, 1123
MspA1I	CMGCKG	2 cut(s)	2355, 2639
MspI	CCGG	5 cut(s)	81, 345, 848, 1227, 2553
MspR9I	CCNGG	8 cut(s)	242, 543, 1227, 1317, 1703, 1976, 2006, 2100
MunI	CAATTG	1 cut(s)	416
Mva1269I	GAATGC	1 cut(s)	2257
MvaI	CCWGG	7 cut(s)	242, 543, 1317, 1703, 1976, 2006, 2100
MvnI	CGCG	1 cut(s)	2089
NciI	CCSGG	1 cut(s)	1227
NdeI	CATATG	1 cut(s)	2325
NdeII	GATC	8 cut(s)	349, 575, 736, 1222, 1501, 1727, 2410, 2581
NlaIV	GGNNCC	3 cut(s)	1544, 1707, 2071
NmuCI	GTSAC	4 cut(s)	1204, 1367, 1484, 1669
NsiI	ATGCAT	2 cut(s)	215, 2114
NspI	RCATGY	4 cut(s)	1023, 2112, 2163, 2169
PceI	AGGCCT	1 cut(s)	1062
PcsI	WCGNNNNNNNCGW	1 cut(s)	997
PctI	GAATGC	1 cut(s)	2257
PdmI	GAANNNNTTC	2 cut(s)	1062, 1593
PflMI	CCANNNNNTGG	3 cut(s)	572, 602, 1718
PfoI	TCCNGGA	2 cut(s)	1225, 1701
PinAI	ACCGGT	1 cut(s)	80
PkrI	GCNGC	8 cut(s)	915, 1509, 2023, 2354, 2357, 2621, 2638, 2641
PleI	GAGTC	3 cut(s)	13, 876, 2463
PpsI	GAGTC	3 cut(s)	13, 876, 2463
Ppu21I	YACGTR	1 cut(s)	2573
Psp6I	CCWGG	7 cut(s)	240, 541, 1315, 1701, 1974, 2004, 2098
PspGI	CCWGG	7 cut(s)	240, 541, 1315, 1701, 1974, 2004, 2098
PspN4I	GGNNCC	3 cut(s)	1544, 1707, 2071
PspOMI	GGGCCC	1 cut(s)	1542
PspPI	GGNCC	5 cut(s)	539, 677, 1542, 1543, 1556
PstI	CTGCAG	2 cut(s)	918, 1509
PsuI	RGATCY	4 cut(s)	1222, 1501, 1727, 2581
PvuII	CAGCTG	1 cut(s)	2355
RsaI	GTAC	4 cut(s)	969, 1393, 2302, 2575
RsaNI	GTAC	4 cut(s)	968, 1392, 2301, 2574
RseI	CAYNNNNRTG	6 cut(s)	831, 1264, 1470, 2164, 2280, 2436
SaqAI	TTAA	5 cut(s)	311, 383, 581, 744, 1937
SatI	GCNGC	8 cut(s)	914, 1508, 2022, 2353, 2356, 2620, 2637, 2640
Sau3AI	GATC	8 cut(s)	349, 575, 736, 1222, 1501, 1727, 2410, 2581
Sau96I	GGNCC	5 cut(s)	539, 677, 1542, 1543, 1556
SchI	GAGTC	3 cut(s)	14, 877, 2463
ScrFI	CCNGG	8 cut(s)	242, 543, 1227, 1317, 1703, 1976, 2006, 2100
SduI	GDGCHC	6 cut(s)	1546, 1710, 1771, 1841, 1871, 2427
SfaNI	GCATC	5 cut(s)	200, 973, 1268, 1990, 2467
SfcI	CTRYAG	3 cut(s)	914, 1505, 1674
SmiMI	CAYNNNNRTG	6 cut(s)	831, 1264, 1470, 2164, 2280, 2436
SmlI	CTYRAG	1 cut(s)	802
SmoI	CTYRAG	1 cut(s)	802
SnaBI	TACGTA	1 cut(s)	2573
SseBI	AGGCCT	1 cut(s)	1062
SsiI	CCGC	6 cut(s)	111, 1795, 2087, 2136, 2588, 2639
SspI	AATATT	1 cut(s)	1552
SspMI	CTAG	3 cut(s)	1335, 1374, 2010
StuI	AGGCCT	1 cut(s)	1062
StyD4I	CCNGG	8 cut(s)	240, 541, 1225, 1315, 1701, 1974, 2004, 2098
StyI	CCWWGG	2 cut(s)	524, 893
TaaI	ACNGT	7 cut(s)	206, 302, 364, 957, 1176, 1204, 2185
TaiI	ACGT	9 cut(s)	508, 1106, 1815, 1838, 2175, 2242, 2306, 2382, 2575
TaqI	TCGA	4 cut(s)	883, 960, 991, 1523
TatI	WGTACW	1 cut(s)	1391
TauI	GCSGC	1 cut(s)	2642
Tru1I	TTAA	5 cut(s)	311, 383, 581, 744, 1937
Tru9I	TTAA	5 cut(s)	311, 383, 581, 744, 1937
TscAI	CASTG	4 cut(s)	209, 960, 1778, 2023
TseFI	GTSAC	4 cut(s)	1204, 1367, 1484, 1669
TseI	GCWGC	7 cut(s)	913, 1507, 2021, 2352, 2355, 2619, 2636
Tsp45I	GTSAC	4 cut(s)	1204, 1367, 1484, 1669
TspGWI	ACGGA	1 cut(s)	2620
TspRI	CASTG	4 cut(s)	209, 960, 1778, 2023
Van91I	CCANNNNNTGG	3 cut(s)	572, 602, 1718
XapI	RAATTY	7 cut(s)	127, 720, 777, 937, 1525, 1846, 2367
XceI	RCATGY	4 cut(s)	1023, 2112, 2163, 2169
XmnI	GAANNNNTTC	2 cut(s)	1062, 1593
XspI	CTAG	3 cut(s)	1335, 1374, 2010
Zsp2I	ATGCAT	2 cut(s)	215, 2114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.