Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001887.1

Orthogroup ID

OG0006399

Physical Location & Seq

Genomic Coordinates Reverse (-)

45918 .. 51992

Gene Structure 6075 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001887.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2937 bp

ctggagattgggaaaagaggaggggttgaatttggggcaatggcgaccaagatttgcatgaatgtttcgtgtgggacgagcaatacgcatgaatggaagaatggctggcctttgcgatctggtggatttgcccatctctgctacaagtgtggagctgcatatgagaaatcagttttctgcgatacattccatttaggggaaacgggttggagggactgcagttcgtgccacaagcctctccactgtggatgcgtagcctctaggtcattatatgagtgcctggattacgggggtgtagggtgcattgcctgtgcaaacagttctcaacctcgtgtgatccagaggaatgatgtcctgaatggttttggtggactgacattaagtaatgctagtgaccgaaaatccacttctgttgaatatagagcggttggtgatacagttgatgagggcaaatttttgcaattgtgtggtactgttgatgagggaaaacttttgcaattatgcaagatcatggaggctaatgagtccacccttttgcctcaatctccgacaggtgaagaaagtgtgtttcttgaatccaatcttttgcctcgacctcagagagatgatataagtgaatcccttggccaaaccaaaggacaagaagtcattcatcaaataggagaagttagcacaggattttttagtgccgcccagtcgtctattggatcgttaacatttgcccaaccagacaacggcagaacaatgttagaggtcaaccatatgagtataccatcctctcagccatctttgagtatgtctttgggagccccatctgcaactccaaatttcgtacaacccttttctggggggcacgtggatataagagaccagagtaagtcaccttctgctttccaacaggtgcaaaaacctcgtcctattttgcccagacctttgaaacctgccctccctataagttcagaggcaaataaaggtgcgcgcattgcaagaccacctgctgaaggacgggggaagaatcagttacttccccgatactggccgcggattactgatcaagagctgcagaagttatcgggagctttgaattctactattgtgccactgtttgagaaagtgctgagtgctagtgatgcgggtcgaattggtcgcttggttctcccgaaagcatgtgctgaggcatattttcctgctatttctcaatcagaaggccttcctctaaggattcaagatgtgaagggaaatgaatggacgtttcaattcagattttggccaaataataatagcaggatgtatgttttagaaggtgtgacaccttgcatacaatcaatgcaactgcaagctggtgatactgtgacattcagtcggatagatcctggaagcaaacttgtcatagggtttcgaaaggcatcacaatctgtaaacatgcagggaccccaaacgtctgtccttccaaatggcacacctggggaaacttccttttctagtgagaatctggctgcaggaagtggtgactctagtcttttccatatgaataaaggaagcaaggatcctcacctaaattctccatcagaccatcatttggttgagtgggatacgtatatgcagaaaagtgagaatggtcacagaacaagtgaggatttgctgcagccagtgtcgaattctgagaaaaagaggacccggaacattgggcctaaaagtaagagattgctcatgcatagtgaagatgttctggagctgaggctgacatgggaagaagcacaggacttgcttcgtccaccgccaagcgtcaaaccaagcattgtcactattgaagattttgaatttgaagagtatgatgagcccccaatttttggaaagagatctatattcactactgggccatctaagagacaggaacagtgggctcagtgtgataattgctccaagtggaggaagttgcctgtcgacattcttcttcctccaaagtggacatgctcagacaattcctgggattcaagcaggtgctcgtgtgctgcaccagaggagatgagcccaaagcaattggataatcttctgagttcatctctatcccttaaaggtttgaagaagagacgaaaaatcattgagaagaaggaagctgaagaacaagagccttctggcttggatgccctggctagtgctgctattctgggagataatgtgcgtgactcaggcgagcaattagttggagccaccaccaaacatccccgtcaccgccctggttgtacttgcatagtgtgtattcaacccccaagcgggaagggcaagcacaagccatcatgcaaatgcaatgtgtgcttgacagtgaaacggcgctttacaaccatgatgcagcggaagaatgagaagcgtcaattagaacgtgaagcagagaattcccagaggaagaatgacaaacacaaggatgaatcagaagtgaatggcaccacattgggagatactgcgttgcatatgaatcactcagcagagaattcccagaggaacaataacaaccacaaggatgaatcagaaatgaatggcaccacatcaggagatgctgcattgcataggaatcactcatcggagaatggagccagcagtagccatagcagaactcaagcagatgctgctgaaagttccagtgccagacaaattgacctgaattgtgaacccttcggtttgtttaggaactccacacttcaagatctcttgaagcttgctaaagctgcctccgcggcccgaccattggagaagtacacaaacgaaaattccctcagaaccatgatgtgcgaggaacaagctggtcttgcttcttgttcacttacacaagccaatggtgacaatgagagacgactgcctaatgaagctcgcatttcatctgtggcatgggactgcccaagtataggtgataaggtttaccgtgagcctgatttagactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B3 zf-CW

Protein Analysis

978

Amino Acids

107.52

Weight (kDa)

7.12

Isoelectric Point (pI)

51.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006399)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520 FvH4_3g40520
malus_domestica	MD03G1051600.v1.1 MD11G1053500.v1.1 MD11G1053700.v1.1
prunus_persica	Prupe.6G041000_v2.0.a1 Prupe.6G041000_v2.0.a1 Prupe.6G041000_v2.0.a1
pyrus_communis	pycom03g04100 pycom11g04330
rosa_chinensis	RchiOBHm_Chr5g0073201
rosa_laevigata	RLG00000036373
rosa_multiflora	Rmu_sc0001887.1_g000012
rosa_roxburghii	Rroxscaffold_1G00007990
rosa_rugosa	Rorug05G0422000 Rorug05G0422100
rosa_samantha	Rh5AG478900 Rh5BG499600 Rh5CG522800 Rh5DG511700
rosa_wichuraiana	Rw5G044520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1003, 1989
Acc36I	ACCTGC	3 cut(s)	949, 1003, 1989
AccB1I	GGYRCC	2 cut(s)	2441, 2537
AccB7I	CCANNNNNTGG	2 cut(s)	1579, 1850
AccBSI	CCGCTC	1 cut(s)	425
AccI	GTMKAC	2 cut(s)	769, 1944
AccII	CGCG	3 cut(s)	979, 1042, 2732
AclWI	GGATC	5 cut(s)	331, 715, 1364, 1541, 1554
AcoI	YGGCCR	3 cut(s)	625, 1037, 1268
AcuI	CTGAAG	2 cut(s)	1020, 2139
AcvI	CACGTG	1 cut(s)	856
AfaI	GTAC	4 cut(s)	472, 834, 2245, 2753
AhdI	GACNNNNNGTC	2 cut(s)	644, 1359
AjnI	CCWGG	6 cut(s)	279, 1372, 1462, 1985, 2148, 2236
Alw21I	GWGCWC	1 cut(s)	2006
Alw26I	GTCTC	4 cut(s)	861, 1882, 2083, 2839
AlwI	GGATC	5 cut(s)	331, 715, 1364, 1541, 1554
AlwNI	CAGNNNCTG	1 cut(s)	2624
AoxI	GGCC	8 cut(s)	107, 625, 1037, 1207, 1268, 1688, 1877, 2733
ArsI	GACNNNNNNTTYG	2 cut(s)	898, 930
Asp700I	GAANNNNTTC	3 cut(s)	648, 1209, 1725
AspLEI	GCGC	3 cut(s)	979, 981, 2334
AspS9I	GGNCC	5 cut(s)	1430, 1674, 1688, 1877, 2734
AsuC2I	CCSGG	1 cut(s)	1678
AsuHPI	GGTGA	9 cut(s)	443, 566, 873, 1355, 1520, 1544, 2222, 2846, 2915
AsuII	TTCGAA	1 cut(s)	1399
AvaII	GGWCC	2 cut(s)	1430, 1674
BaeGI	GKGCMC	1 cut(s)	855
BalI	TGGCCA	2 cut(s)	627, 1270
BamHI	GGATCC	1 cut(s)	1546
BanI	GGYRCC	2 cut(s)	2441, 2537
BanII	GRGCYC	4 cut(s)	811, 1842, 1906, 2033
BarI	GAAGNNNNNNTAC	2 cut(s)	868, 900
BauI	CACGAG	2 cut(s)	330, 2005
BbrPI	CACGTG	1 cut(s)	856
Bbv12I	GWGCWC	1 cut(s)	2006
BbvCI	CCTCAGC	2 cut(s)	1173, 1736
BccI	CCATC	8 cut(s)	141, 781, 793, 820, 1573, 1581, 1888, 2302
BceAI	ACGGC	2 cut(s)	751, 2345
BcgI	CGANNNNNNTGC	2 cut(s)	893, 927
BciT130I	CCWGG	6 cut(s)	281, 1374, 1464, 1987, 2150, 2238
BciVI	GTATCC	1 cut(s)	1585
BclI	TGATCA	1 cut(s)	1051
BcnI	CCSGG	1 cut(s)	1678
BcoDI	GTCTC	4 cut(s)	861, 1882, 2083, 2839
BfaI	CTAG	6 cut(s)	261, 390, 1125, 1482, 1515, 2154
BfmI	CTRYAG	4 cut(s)	217, 1061, 1497, 1643
BfoI	RGCGCY	1 cut(s)	2335
BfuAI	ACCTGC	3 cut(s)	949, 1003, 1989
BfuI	GTATCC	1 cut(s)	1585
BglI	GCCNNNNNGGC	1 cut(s)	2732
BglII	AGATCT	2 cut(s)	1859, 2701
Bme1390I	CCNGG	7 cut(s)	281, 1374, 1464, 1678, 1987, 2150, 2238
Bme18I	GGWCC	2 cut(s)	1430, 1674
BmeRI	GACNNNNNGTC	2 cut(s)	644, 1359
BmgT120I	GGNCC	5 cut(s)	1430, 1674, 1688, 1877, 2734
BmiI	GGNNCC	9 cut(s)	808, 1431, 1432, 1548, 1676, 2209, 2443, 2539, 2590
BmrFI	CCNGG	7 cut(s)	281, 1374, 1464, 1678, 1987, 2150, 2238
BmrI	ACTGGG	2 cut(s)	688, 1884
BmsI	GCATC	7 cut(s)	239, 1120, 1415, 2134, 2337, 2542, 2611
BmuI	ACTGGG	2 cut(s)	688, 1884
BoxI	GACNNNNGTC	1 cut(s)	1515
BplI	GAGNNNNNCTC	2 cut(s)	2047, 2079
BpmI	CTGGAG	2 cut(s)	23, 1751
Bpu10I	CCTNAGC	2 cut(s)	1173, 1736
Bpu14I	TTCGAA	1 cut(s)	1399
BpuEI	CTTGAG	1 cut(s)	2598
BpuMI	CCSGG	1 cut(s)	1678
BsaAI	YACGTR	2 cut(s)	856, 1596
BsaI	GGTCTC	1 cut(s)	861
BsaJI	CCNNGG	7 cut(s)	622, 1040, 1463, 1986, 2148, 2236, 2730
BsaXI	ACNNNNNCTCC	4 cut(s)	930, 960, 2163, 2193
Bse1I	ACTGG	5 cut(s)	694, 1040, 1649, 1879, 2637
Bse3DI	GCAATG	5 cut(s)	45, 303, 981, 2314, 2558
BseBI	CCWGG	6 cut(s)	281, 1374, 1464, 1987, 2150, 2238
BseDI	CCNNGG	7 cut(s)	622, 1040, 1463, 1986, 2148, 2236, 2730
BseGI	GGATG	7 cut(s)	254, 773, 1293, 2149, 2221, 2428, 2524
BseMI	GCAATG	5 cut(s)	45, 303, 981, 2314, 2558
BseNI	ACTGG	5 cut(s)	694, 1040, 1649, 1879, 2637
BsePI	GCGCGC	1 cut(s)	977
BseRI	GAGGAG	2 cut(s)	33, 2036
BseSI	GKGCMC	1 cut(s)	855
BsgI	GTGCAG	1 cut(s)	1998
Bsh1236I	CGCG	3 cut(s)	979, 1042, 2732
BshFI	GGCC	8 cut(s)	109, 627, 1039, 1209, 1270, 1690, 1879, 2735
BshNI	GGYRCC	2 cut(s)	2441, 2537
BsiHKAI	GWGCWC	1 cut(s)	2006
BsiSI	CCGG	1 cut(s)	1678
BslFI	GGGAC	4 cut(s)	88, 227, 1443, 2900
BsmAI	GTCTC	4 cut(s)	861, 1882, 2083, 2839
BsmBI	CGTCTC	2 cut(s)	2083, 2839
BsmFI	GGGAC	4 cut(s)	88, 227, 1443, 2900
BsnI	GGCC	8 cut(s)	109, 627, 1039, 1209, 1270, 1690, 1879, 2735
Bso31I	GGTCTC	1 cut(s)	861
Bsp119I	TTCGAA	1 cut(s)	1399
Bsp1286I	GDGCHC	6 cut(s)	811, 855, 1842, 1906, 2006, 2033
Bsp143I	GATC	9 cut(s)	116, 336, 507, 707, 1051, 1369, 1546, 1859, 2701
BspANI	GGCC	8 cut(s)	109, 627, 1039, 1209, 1270, 1690, 1879, 2735
BspFNI	CGCG	3 cut(s)	979, 1042, 2732
BspLI	GGNNCC	9 cut(s)	808, 1431, 1432, 1548, 1676, 2209, 2443, 2539, 2590
BspMAI	CTGCAG	4 cut(s)	221, 1065, 1501, 1647
BspMI	ACCTGC	3 cut(s)	949, 1003, 1989
BspPI	GGATC	5 cut(s)	331, 715, 1364, 1541, 1554
BspT104I	TTCGAA	1 cut(s)	1399
BspT107I	GGYRCC	2 cut(s)	2441, 2537
BspTNI	GGTCTC	1 cut(s)	861
BsrBI	CCGCTC	1 cut(s)	425
BsrDI	GCAATG	5 cut(s)	45, 303, 981, 2314, 2558
BsrI	ACTGG	5 cut(s)	694, 1040, 1649, 1879, 2637
BssECI	CCNNGG	7 cut(s)	622, 1040, 1463, 1986, 2148, 2236, 2730
BssHII	GCGCGC	1 cut(s)	977
BssMI	GATC	9 cut(s)	116, 336, 507, 707, 1051, 1369, 1546, 1859, 2701
BssNAI	GTATAC	1 cut(s)	770
BssSI	CACGAG	2 cut(s)	330, 2005
BssT1I	CCWWGG	1 cut(s)	622
Bst1107I	GTATAC	1 cut(s)	770
Bst2BI	CACGAG	2 cut(s)	330, 2005
Bst2UI	CCWGG	6 cut(s)	281, 1374, 1464, 1987, 2150, 2238
Bst4CI	ACNGT	9 cut(s)	245, 320, 439, 475, 1104, 1351, 1899, 2323, 2918
Bst6I	CTCTTC	2 cut(s)	1821, 2081
BstAPI	GCANNNNNTGC	3 cut(s)	225, 2313, 2624
BstBAI	YACGTR	2 cut(s)	856, 1596
BstBI	TTCGAA	1 cut(s)	1399
BstC8I	GCNNGC	8 cut(s)	107, 979, 1338, 2195, 2285, 2593, 2715, 2866
BstDSI	CCRYGG	2 cut(s)	1040, 2730
BstENI	CCTNNNNNAGG	1 cut(s)	999
BstF5I	GGATG	7 cut(s)	254, 773, 1293, 2149, 2221, 2428, 2524
BstFNI	CGCG	3 cut(s)	979, 1042, 2732
BstH2I	RGCGCY	1 cut(s)	2335
BstHHI	GCGC	3 cut(s)	979, 981, 2334
BstKTI	GATC	9 cut(s)	119, 339, 510, 710, 1054, 1372, 1549, 1862, 2704
BstMAI	GTCTC	4 cut(s)	861, 1882, 2083, 2839
BstMBI	GATC	9 cut(s)	116, 336, 507, 707, 1051, 1369, 1546, 1859, 2701
BstNI	CCWGG	6 cut(s)	281, 1374, 1464, 1987, 2150, 2238
BstNSI	RCATGY	3 cut(s)	1170, 1426, 1974
BstPAI	GACNNNNGTC	1 cut(s)	1515
BstSCI	CCNGG	7 cut(s)	279, 1372, 1462, 1676, 1985, 2148, 2236
BstSFI	CTRYAG	4 cut(s)	217, 1061, 1497, 1643
BstSLI	GKGCMC	1 cut(s)	855
BstSNI	TACGTA	1 cut(s)	1596
BstUI	CGCG	3 cut(s)	979, 1042, 2732
BstX2I	RGATCY	4 cut(s)	1369, 1546, 1859, 2701
BstYI	RGATCY	4 cut(s)	1369, 1546, 1859, 2701
BstZ17I	GTATAC	1 cut(s)	770
BsuI	GTATCC	1 cut(s)	1585
BsuRI	GGCC	8 cut(s)	109, 627, 1039, 1209, 1270, 1690, 1879, 2735
BtgI	CCRYGG	2 cut(s)	1040, 2730
BtsCI	GGATG	7 cut(s)	254, 773, 1293, 2149, 2221, 2428, 2524
BtsIMutI	CAGTG	7 cut(s)	241, 1100, 1656, 1904, 1913, 2328, 2644
BveI	ACCTGC	3 cut(s)	949, 1003, 1989
Cac8I	GCNNGC	8 cut(s)	107, 979, 1338, 2195, 2285, 2593, 2715, 2866
CaiI	CAGNNNCTG	1 cut(s)	2624
CfoI	GCGC	3 cut(s)	979, 981, 2334
Cfr13I	GGNCC	5 cut(s)	1430, 1674, 1688, 1877, 2734
Cfr42I	CCGCGG	2 cut(s)	1043, 2733
CseI	GACGC	2 cut(s)	1774, 2357
Csp6I	GTAC	4 cut(s)	471, 833, 2244, 2752
CspCI	CAANNNNNGTGG	2 cut(s)	394, 429
CviQI	GTAC	4 cut(s)	471, 833, 2244, 2752
DpnI	GATC	9 cut(s)	118, 338, 509, 709, 1053, 1371, 1548, 1861, 2703
DpnII	GATC	9 cut(s)	116, 336, 507, 707, 1051, 1369, 1546, 1859, 2701
DriI	GACNNNNNGTC	2 cut(s)	644, 1359
EaeI	YGGCCR	3 cut(s)	625, 1037, 1268
Eam1104I	CTCTTC	2 cut(s)	1821, 2081
Eam1105I	GACNNNNNGTC	2 cut(s)	644, 1359
EarI	CTCTTC	2 cut(s)	1821, 2081
Eco105I	TACGTA	1 cut(s)	1596
Eco130I	CCWWGG	1 cut(s)	622
Eco147I	AGGCCT	1 cut(s)	1209
Eco24I	GRGCYC	4 cut(s)	811, 1842, 1906, 2033
Eco31I	GGTCTC	1 cut(s)	861
Eco47I	GGWCC	2 cut(s)	1430, 1674
Eco57I	CTGAAG	2 cut(s)	1020, 2139
Eco72I	CACGTG	1 cut(s)	856
EcoNI	CCTNNNNNAGG	1 cut(s)	999
EcoO109I	RGGNCCY	2 cut(s)	1430, 1674
EcoRI	GAATTC	4 cut(s)	1084, 1657, 2392, 2488
EcoRII	CCWGG	6 cut(s)	279, 1372, 1462, 1985, 2148, 2236
EcoT14I	CCWWGG	1 cut(s)	622
EcoT22I	ATGCAT	1 cut(s)	1716
EcoT38I	GRGCYC	4 cut(s)	811, 1842, 1906, 2033
ErhI	CCWWGG	1 cut(s)	622
Esp3I	CGTCTC	2 cut(s)	2083, 2839
FalI	AAGNNNNNCTT	2 cut(s)	2787, 2819
FaqI	GGGAC	4 cut(s)	88, 227, 1443, 2900
FauI	CCCGC	2 cut(s)	1126, 2267
FauNDI	CATATG	4 cut(s)	160, 762, 1527, 2469
FbaI	TGATCA	1 cut(s)	1051
FblI	GTMKAC	2 cut(s)	769, 1944
FokI	GGATG	7 cut(s)	261, 760, 1300, 2156, 2208, 2435, 2531
FriOI	GRGCYC	4 cut(s)	811, 1842, 1906, 2033
FspBI	CTAG	6 cut(s)	261, 390, 1125, 1482, 1515, 2154
GlaI	GCGC	3 cut(s)	978, 980, 2333
GsuI	CTGGAG	2 cut(s)	23, 1751
HaeII	RGCGCY	1 cut(s)	2335
HaeIII	GGCC	8 cut(s)	109, 627, 1039, 1209, 1270, 1690, 1879, 2735
HapII	CCGG	1 cut(s)	1678
HgaI	GACGC	2 cut(s)	1774, 2357
HhaI	GCGC	3 cut(s)	979, 981, 2334
Hin6I	GCGC	3 cut(s)	977, 979, 2332
HinP1I	GCGC	3 cut(s)	977, 979, 2332
HincII	GTYRAC	3 cut(s)	714, 757, 1945
HindII	GTYRAC	3 cut(s)	714, 757, 1945
HindIII	AAGCTT	1 cut(s)	2711
HpaI	GTTAAC	1 cut(s)	714
HpaII	CCGG	1 cut(s)	1678
HphI	GGTGA	9 cut(s)	443, 566, 873, 1355, 1520, 1544, 2222, 2846, 2915
HpyCH4III	ACNGT	9 cut(s)	245, 320, 439, 475, 1104, 1351, 1899, 2323, 2918
HpyCH4IV	ACGT	5 cut(s)	855, 1250, 1439, 1595, 2380
HpySE526I	ACGT	5 cut(s)	855, 1250, 1439, 1595, 2380
HspAI	GCGC	3 cut(s)	977, 979, 2332
KflI	GGGWCCC	1 cut(s)	1430
Ksp22I	TGATCA	1 cut(s)	1051
KspAI	GTTAAC	1 cut(s)	714
KspI	CCGCGG	2 cut(s)	1043, 2733
Kzo9I	GATC	9 cut(s)	116, 336, 507, 707, 1051, 1369, 1546, 1859, 2701
LmnI	GCTCC	7 cut(s)	152, 806, 1076, 1732, 1925, 2207, 2588
LweI	GCATC	7 cut(s)	239, 1120, 1415, 2134, 2337, 2542, 2611
MaeI	CTAG	6 cut(s)	261, 390, 1125, 1482, 1515, 2154
MaeII	ACGT	5 cut(s)	855, 1250, 1439, 1595, 2380
MalI	GATC	9 cut(s)	118, 338, 509, 709, 1053, 1371, 1548, 1861, 2703
MbiI	CCGCTC	1 cut(s)	425
MboI	GATC	9 cut(s)	116, 336, 507, 707, 1051, 1369, 1546, 1859, 2701
MfeI	CAATTG	2 cut(s)	461, 2039
MflI	RGATCY	4 cut(s)	1369, 1546, 1859, 2701
MhlI	GDGCHC	6 cut(s)	811, 855, 1842, 1906, 2006, 2033
MlsI	TGGCCA	2 cut(s)	627, 1270
MluNI	TGGCCA	2 cut(s)	627, 1270
MlyI	GAGTC	3 cut(s)	533, 1505, 2180
MmeI	TCCRAC	5 cut(s)	188, 572, 919, 1343, 2185
Mox20I	TGGCCA	2 cut(s)	627, 1270
Mph1103I	ATGCAT	1 cut(s)	1716
MroXI	GAANNNNTTC	3 cut(s)	648, 1209, 1725
MscI	TGGCCA	2 cut(s)	627, 1270
MseI	TTAA	3 cut(s)	380, 713, 2073
MslI	CAYNNNNRTG	3 cut(s)	2302, 2421, 2517
Msp20I	TGGCCA	2 cut(s)	627, 1270
MspA1I	CMGCKG	3 cut(s)	1042, 2353, 2732
MspI	CCGG	1 cut(s)	1678
MspR9I	CCNGG	7 cut(s)	281, 1374, 1464, 1678, 1987, 2150, 2238
MunI	CAATTG	2 cut(s)	461, 2039
MvaI	CCWGG	6 cut(s)	281, 1374, 1464, 1987, 2150, 2238
MvnI	CGCG	3 cut(s)	979, 1042, 2732
NciI	CCSGG	1 cut(s)	1678
NdeI	CATATG	4 cut(s)	160, 762, 1527, 2469
NdeII	GATC	9 cut(s)	116, 336, 507, 707, 1051, 1369, 1546, 1859, 2701
NlaIV	GGNNCC	9 cut(s)	808, 1431, 1432, 1548, 1676, 2209, 2443, 2539, 2590
NsiI	ATGCAT	1 cut(s)	1716
NspI	RCATGY	3 cut(s)	1170, 1426, 1974
NspV	TTCGAA	1 cut(s)	1399
PaqCI	CACCTGC	2 cut(s)	1003, 1989
PauI	GCGCGC	1 cut(s)	977
PceI	AGGCCT	1 cut(s)	1209
PcsI	WCGNNNNNNNCGW	1 cut(s)	74
PdmI	GAANNNNTTC	3 cut(s)	648, 1209, 1725
PflMI	CCANNNNNTGG	2 cut(s)	1579, 1850
PfoI	TCCNGGA	1 cut(s)	1372
PleI	GAGTC	3 cut(s)	532, 1505, 2180
PmaCI	CACGTG	1 cut(s)	856
PmlI	CACGTG	1 cut(s)	856
PpsI	GAGTC	3 cut(s)	532, 1505, 2180
Ppu21I	YACGTR	2 cut(s)	856, 1596
PpuMI	RGGWCCY	2 cut(s)	1430, 1674
PshAI	GACNNNNGTC	1 cut(s)	1515
Psp5II	RGGWCCY	2 cut(s)	1430, 1674
Psp6I	CCWGG	6 cut(s)	279, 1372, 1462, 1985, 2148, 2236
PspCI	CACGTG	1 cut(s)	856
PspGI	CCWGG	6 cut(s)	279, 1372, 1462, 1985, 2148, 2236
PspN4I	GGNNCC	9 cut(s)	808, 1431, 1432, 1548, 1676, 2209, 2443, 2539, 2590
PspPI	GGNCC	5 cut(s)	1430, 1674, 1688, 1877, 2734
PspPPI	RGGWCCY	2 cut(s)	1430, 1674
PstI	CTGCAG	4 cut(s)	221, 1065, 1501, 1647
PstNI	CAGNNNCTG	1 cut(s)	2624
PsuI	RGATCY	4 cut(s)	1369, 1546, 1859, 2701
PteI	GCGCGC	1 cut(s)	977
RsaI	GTAC	4 cut(s)	472, 834, 2245, 2753
RsaNI	GTAC	4 cut(s)	471, 833, 2244, 2752
RseI	CAYNNNNRTG	3 cut(s)	2302, 2421, 2517
SacII	CCGCGG	2 cut(s)	1043, 2733
SalI	GTCGAC	1 cut(s)	1943
SaqAI	TTAA	3 cut(s)	380, 713, 2073
Sau3AI	GATC	9 cut(s)	116, 336, 507, 707, 1051, 1369, 1546, 1859, 2701
Sau96I	GGNCC	5 cut(s)	1430, 1674, 1688, 1877, 2734
SchI	GAGTC	3 cut(s)	533, 1505, 2180
ScrFI	CCNGG	7 cut(s)	281, 1374, 1464, 1678, 1987, 2150, 2238
SduI	GDGCHC	6 cut(s)	811, 855, 1842, 1906, 2006, 2033
SfaNI	GCATC	7 cut(s)	239, 1120, 1415, 2134, 2337, 2542, 2611
SfcI	CTRYAG	4 cut(s)	217, 1061, 1497, 1643
Sfr303I	CCGCGG	2 cut(s)	1043, 2733
SfuI	TTCGAA	1 cut(s)	1399
SgrBI	CCGCGG	2 cut(s)	1043, 2733
SinI	GGWCC	2 cut(s)	1430, 1674
SmiMI	CAYNNNNRTG	3 cut(s)	2302, 2421, 2517
SmlI	CTYRAG	1 cut(s)	2613
SmoI	CTYRAG	1 cut(s)	2613
SnaBI	TACGTA	1 cut(s)	1596
SseBI	AGGCCT	1 cut(s)	1209
SspMI	CTAG	6 cut(s)	261, 390, 1125, 1482, 1515, 2154
StuI	AGGCCT	1 cut(s)	1209
StyD4I	CCNGG	7 cut(s)	279, 1372, 1462, 1676, 1985, 2148, 2236
StyI	CCWWGG	1 cut(s)	622
TaaI	ACNGT	9 cut(s)	245, 320, 439, 475, 1104, 1351, 1899, 2323, 2918
TaiI	ACGT	5 cut(s)	858, 1253, 1442, 1598, 2383
TaqI	TCGA	5 cut(s)	592, 1138, 1399, 1655, 1944
TaqII	GACCGA	1 cut(s)	411
TatI	WGTACW	2 cut(s)	2243, 2751
TauI	GCSGC	3 cut(s)	692, 1042, 2735
Tru1I	TTAA	3 cut(s)	380, 713, 2073
Tru9I	TTAA	3 cut(s)	380, 713, 2073
TscAI	CASTG	7 cut(s)	248, 1107, 1656, 1904, 1913, 2328, 2644
TspRI	CASTG	7 cut(s)	248, 1107, 1656, 1904, 1913, 2328, 2644
Van91I	CCANNNNNTGG	2 cut(s)	1579, 1850
VpaK11BI	GGWCC	2 cut(s)	1430, 1674
XagI	CCTNNNNNAGG	1 cut(s)	999
XceI	RCATGY	3 cut(s)	1170, 1426, 1974
XcmI	CCANNNNNNNNNTGG	1 cut(s)	701
XmiI	GTMKAC	2 cut(s)	769, 1944
XmnI	GAANNNNTTC	3 cut(s)	648, 1209, 1725
XspI	CTAG	6 cut(s)	261, 390, 1125, 1482, 1515, 2154
Zsp2I	ATGCAT	1 cut(s)	1716

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.